cluster # 11338

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11338 cluster # 11338 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11338#0 length = 1720 sequences # 8
consensusID : consensus_11338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1720
fasta sequence
                              [AAAAAAACCATGAAAAGAGGAAACCGAACTCCGCTATAAAACCGCGCCTCCGCCGCGACGAAGCCGACCAAGTGAAGCAGCGCCGCCGCCGCCGACGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTAC-TGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGGTCGCTTTGGTTTCAAGATTGAAACATGAAAACTTTGTAGATATGTTGGGATACTGCACGGAGGGTAACCTTCGCCTAGTAGCATATGAATTTGCCACTATGGGTTCACTGCATGATGTTCTACATGGAAGAAAAGGGGTGCAAGGTGCACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATTGTTCATAGGGATATTAGATCAAGTAACATACTCTTATTTGAAGACTTCAAGGCAAAAGTTGCAGACTTCAATCTCTCAAATCAGGCTCCAGATATGGCTGCTCGTCTGCATTCTACTCGTGTACTGGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGCTGACACAGAAAAGTGATGTGTATAGCTTCGGAGTTGTTCTCTTGGAACTTCTGACAGGAAGAAAACCAGTAGATCATACAATGCCTAGAGGGCAGCAGAGCTTGGTTACAT-GGGCTACACCAAGATTAACTGAAGATAAGGTGAAGCA-GTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTGCCAAGCTTGCAGCGGTTGCAGCATTGTGCGTACAATACGAAGCTGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCACTGCTCACAAGTAAGCCGACTCCACCCGCGCCTCCACCAGCTCTGGACGGTTGATGTCCAGAATCATCAGAGAAGAAATAACAACTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTACTTGTGTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB649040             [AAAAAAACCATGAAAAGAGGAAACCGAACTCCGCTATAAAACCGCGCCTCCGCCGCGACGAAGCCGACCAAGTGAAGCAGCGCCGCCGCCGCCGACGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTAC TGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGGTCGCTTTGGTTTCAAGATTGAAACATGAAAACTTTGTAGATATGTTGGGATACTGCACGGAGGGTAACCTTCGCCTAGTAGCATATGAATTTGCCACTATGGGTTCACTGCATGATGTTCTACATGGAAGAAAAGGGGTGCAAGGTGCACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATTGTTCATAGGGATATTAGATCAAGTAACATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK121843             [                       CCGAACTCCGCTATAAAACCGCGCCTCCGCCGCGACGAAGCCGACCAAGTGAAGCAGCGCCGCCGCCGCCGACGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTAC TGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGGTCGCTTTGGTTTCAAGATTGAAACATGAAAACTTTGTAGATATGTTGGGATACTGCACGGAGGGTAACCTTCGCCTAGTAGCATATGAATTTGCCACTATGGGTTCACTGCATGATGTTCTACATGGAAGAAAAGGGGTGCAAGGTGCACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATTGTTCATAGGGATATTAGATCAAGTAACATACTCTTATTTGAAGACTTCAAGGCAAAAGTTGCAGACTTCAATCTCTCAAATCAGGCTCCAGATATGGCTGCTCGTCTGCATTCTACTCGTGTACTGGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGCTGACACAGAAAAGTGATGTGTATAGCTTCGGAGTTGTTCTCTTGGAACTTCTGACAGGAAGAAAACCAGTAGATCATACAATGCCTAGAGGGCAGCAGAGCTTGGTTACAT GGGCTACACCAAGATTAACTGAAGATAAGGTGAAGCA GTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTGCCAAGCTTGCAGCGGTTGCAGCATTGTGCGTACAATACGAAGCTGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCACTGCTCACAAGTAAGCCGACTCCACCCGCGCCTCCACCAGCTCTGGACGGTTGATGTACAGAATCATCAGAGAAGAAATAACAACTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTACTT                        ]
[+] EMBL AU184279             [                                                                                               CGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTACTTGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB649041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATCGTTCATAGGGATATTAGATCAAGTAACATACTCTTATTTGAAGACTTCAAGGCAAAAGTTGCAGACTTCAATCTCTCAAATCAGGCTCCAGATATGGCTGCTCGTCTGCATTGTACTCGTGTACTGGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGCTGACACAGAAAAGTGATGTGTATAGCTTCGGAGTTGTTCTCTTGGAACTTCTGCCAGGAAGAAAACCAGTAGATCATACAATGCCTAGAGGGCAGCAGAGCTTGGTTACAT GGGCTACACCAAGATTAACTGAAGATAAGGTGAAGCA GTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTGCCAAGCTTGCAGCGGTTGCAGCATTGTGCGTACAATATGAAGCTGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCACTGCTCACAAGTAAGCTGACTCCACCCGCGCCTCCACCAGCTTTGGACGGTTGATGTCCAGAATCATCAGAGAAGAAATACCACCTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAAGGGCATGGAGAATGTGTTTTGCCTTTTGATGGACCAtaaaaagg                                                                                                                                                                                                                                                         ]
[-] EMBL CA763068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGC TGGTACCATGGGGTTCCCCCAAGGTTAACTGAAGATAAGGTGAACCAGGTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTTCCAAGCTTGCACCGGTGGCACCCTTGTGCGTACAATACGAAGACGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCCCTGCTCACAAGTAAGCCGACTCCACCCGCGCCTCCACCAGCTCTGGACGGTTGATGTCCAGAATCATCAGAGAAGAAATAGCAACTAAGCCCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATAGCATACCCCAGAAGGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACCCGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTTTGGGCCAACCATTGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTTGTAGTCGTTTATTCAATAAACAAGAGCTGATGTACTGCTGAATATTGATGATGTTCGTTGATTCAAATAGTGTCGCTGTTACTTGTGTTAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU184280             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCATCAGAGAAGAAATAACAACTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTACTTGTGTTGCTTTAAAAAAAAA     ]
[+] EMBL AU057870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ggnnGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTA        AAAAAAAAAAA        ]
[+] EMBL AU057394             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGAATTCAGGCTAACTGCATGGNGAATGTGTTTTGCCTTTTGANGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATNGTATCGCTGTTA        AAAAAAAAAAA        ]




>consensus_11338#0
AAAAAAACCATGAAAAGAGGAAACCGAACTCCGCTATAAAACCGCGCCTCCGCCGCGACG
AAGCCGACCAAGTGAAGCAGCGCCGCCGCCGCCGACGACGACGACGACGACGACGAAACC
GCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGG
TGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGA
CATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCT
ACTGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTG
GACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCT
TATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTT
GATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGGTCGCTTTGGTTTCAAGA
TTGAAACATGAAAACTTTGTAGATATGTTGGGATACTGCACGGAGGGTAACCTTCGCCTA
GTAGCATATGAATTTGCCACTATGGGTTCACTGCATGATGTTCTACATGGAAGAAAAGGG
GTGCAAGGTGCACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTT
GATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATTGTTCATAGG
GATATTAGATCAAGTAACATACTCTTATTTGAAGACTTCAAGGCAAAAGTTGCAGACTTC
AATCTCTCAAATCAGGCTCCAGATATGGCTGCTCGTCTGCATTCTACTCGTGTACTGGGA
ACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGCTGACACAGAAAAGTGAT
GTGTATAGCTTCGGAGTTGTTCTCTTGGAACTTCTGACAGGAAGAAAACCAGTAGATCAT
ACAATGCCTAGAGGGCAGCAGAGCTTGGTTACATGGGCTACACCAAGATTAACTGAAGAT
AAGGTGAAGCAGTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTGCC
AAGCTTGCAGCGGTTGCAGCATTGTGCGTACAATACGAAGCTGAGTTTCGCCCAAACATG
AGCATTGTGGTGAAGGCTTTATCTCCACTGCTCACAAGTAAGCCGACTCCACCCGCGCCT
CCACCAGCTCTGGACGGTTGATGTCCAGAATCATCAGAGAAGAAATAACAACTAAGACCA
TATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATA
CCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAAT
GTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGAC
GGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTT
GCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGT
TTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAAT
AGTATCGCTGTTACTTGTGTTAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case