|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11339#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1994 fasta sequence
[GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACTCCTCGACGCGGCCGCAAGCTATTCCGACTCGCCGGACCTCCTCCTGCGCCTTCTTGAGGATCCGTGGGTGGCGGACTAGCTCCGTCATCACCCACTCCAGCGTCGCGAACGTGGTGTCCGTGCCGGCGACGAACATGTCCTGGTGGTTGTTGTCACGTCATGTCAAGATCAGAGGAGGAGCAACAATGGCGGCGAGTCAATTCGAGAGTTTTAATGGTGGGTATTAATGGCGTACCAGGACGAGGGCCTTGAGATTGTCGTCGGTTAGGGGGACCTCGAGGTCGGGGGATTTCTGGACGCGGAGGAGGACGTCGACGAAGTCCTCGTCGCGGTCGCCGGGGATGCGCTGGCGGTTGCCGCTGATGTGTTCGTCCACGATCACGTCGCAGGCCTCGCGGAGGTCGGCGAGGCACTTCTTGAGGCGGCGGCGGAGTCCGGTGACGGTGCTGGCGACGGGCTCGAGCTCGGGGAAGAAGTCGCCGATGGTGAACCCGGCGAAGAGGTCCTGCGCCTCGGCGAGCACCGCGCCGAGCTTGTCGCCCTCGCCGTGCGGGAACCGGCGGCCGAACGCGACGCGGCAGAGCACGTCGTTGGCGAGGTTGAGGAAGCACTCGCTGAGGTCGACGGGCTTCGCCGGCGAGGTNTTCTTGGTGAGGTGCGCGAGCAGGCGGCGGAGCTCCTTGACCCTGGCGGCGCCGTACGTGCGAGCGCGACGCGCCGACAGGAGCTCCGACACCACCACGCGGCGCGCCATCCGGTGGTACGGGCCCCGCCGGCGCGAACGTCACGTCGGAGCAGCCGAACGACAGGAACTGGCCGGAGAGCAGGTGCGGCCGCGACGCCAGCGCGGCGTCGTTGGTGGTGAGCGCGGCGCGGGCGAGGTCCGGCTTGGAGATCACCACCGCCGGCACGCTCCCCAGCCGCATCCGGAACAGCGGCGCGCGCATGGTGCGCGCCAGCTCGGCCAGCGCGTGGTGCGGCATGCCGGACATGAGGTGGAGGTGCCCGATCACCGGCCACCCCGGCGGCGACGGCGGCAGCCGCCGTGGCTTTGACGACGACGACCGGCTCCTCCTCAACGCGACCAACACGTACGCCGCGGAGAGCACGAGCAGCGCGAGCGACATCGTCGACGCCATGGTGAGCTCCATATCGTCGAACACTTGGGGTGCACGTTTGGTCCAAGAAACTTAAGCAGCAATGGAGATGTGTTGGTATGAACTAACCGTGGTTAAGTGGGGAAGGGTTTATATAGTGGGTGGTTGGTTGGAGGAGAGGTAGATGCACACGTTGGGCACTGAAGATTTTCATTAGATTTATCACATGAGTTGAAGAGATCAACGTTATCTGAGATCAAGGTGTGGAATGCGACAGATAGTGTATACTTGTGTAGTACTCTAACTAGTAAGATGGATGTTGAAACAGCGAATTAATGTGGAATTAATTGCATCAAA]
[-] EMBL BU673387 [GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGT GGACTCCTCGACGCGGCCGCAAGCTATTC ]
[-] EMBL BU672966 [GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGT GAGCTCGCCGAGGTGGGACTC ]
[-] EMBL BI305808 [GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGA ]
[-] EMBL CB965027 [GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGa ]
[+] EMBL AK121788 [ AAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGCAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACTAGCAACGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACTCCTCGACGCGGCCGCTGTCGCCGACGACTCGCCGGACCTCCTCCTGCGCCTTCTTGAGGATCCGTGGGTGGCGGACTAGCTCCGTCATCACCCACTCCAGCGTCGCGAACGTGGTGTCCGTGCCGGCGACGAACATGTCCTGGTGGTTGTTGTCACGTCATGTCAAGATCAGAGGAGGAGCAACAATGGCGGCGAGTCAATTCGAGAGTTTTAATGGTGGGTATTAATGGCGTACCAGGACGAGGGCCTTGAGATTGTCGTCGGTTAGGGGGACCTCGAGGTCGGGGGATTTCTGGACGCGGAGGAGGACGTCGACGAAGTCCTCGTCGCGGTCGCCGGGGATGCGCTGGCGGTTGCCGCTGATGTGTTCGTCCACGATCACGTCGCAGGCCTCGCGGAGGTCGGCGAGGCACTTCTTGAGGCGGCGGCGGAGTCCGGTGACGGTGCTGGCGACGGGCTCGAGCTCGGGGAAGAAGTCGCCGATGGTGAACCCGGCGAAGAGGTCCTGCGCCTCGGCGAGCACCGCGCCGAGCTTGTCGCCCTCGCCGTGCGGGAACCGGCGGCCGAACGCGACGCGGCAGAGCACGTCGTTGGCGAGGTTGAGGAAGCACTCGCTGAGGTCGACGGGCTTCGCCGGCGAGGTNTTCTTGGTGAGGTGCGCGAGCAGGCGGCGGAGCTCCTTGACCCTGGCGGCGCCGTACGTGCGAGCGCGACGCGCCGACAGGAGCTCCGACACCACCACGCGGCGCGCCATCCGGTGGTACGGGCCCCGCCGGCGCGAACGTCACGTCGGAGCAGCCGAACGACAGGAACTGGCCGGAGAGCAGGTGCGGCCGCGACGCCAGCGCGGCGTCGTTGGTGGTGAGCGCGGCGCGGGCGAGGTCCGGCTTGGAGATCACCACCGCCGGCACGCTCCCCAGCCGCATCCGGAACAGCGGCGCGCGCATGGTGCGCGCCAGCTCGGCCAGCGCGTGGTGCGGCATGCCGGACATGAGGTGGAGGTGCCCGATCACCGGCCACCCCGGCGGCGACGGCGGCAGCCGCCGTGGCTTTGACGACGACGACCGGCTCCTCCTCAACGCGACCAACACGTACGCCGCGGAGAGCACGAGCAGCGCGAGCGACATCGTCGACGCCATGGTGAGCTCCATATCGTCGAACACTTGGGGTGCACGTTTGGTCCAAGAAACTTAAGCAGCAATGGAGATGTGTTGGTATGAACTAACCGTGGTTAAGTGGGGAAGGGTTTATATAGTGGGTGGTTGGTTGGAGGAGAGGTAGATGCACACGTTGGGCACTGAAGATTTTCATTAGATTTATCACATGAGTTGAAGAGATCAACGTTATCTGAGATCAAGGTGTGGAATGCGACAGATAGTGTATACTTGTGTAGTACTCTAACTAGTAAGATGGATGTTGAAACAGCGAATTAATGTGGAATTAATTGCATCAAA]
consensusID : consensus_11339#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1658 fasta sequence
[GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGCAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACTAGCAACGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACTCCTCGACGCGGCCGCTGTCGCCGACGACTCGCCGGACCTCCTCCTGCGCCTTCTTGAGGATCCGTGGGTGGCGGACTAGCTCCGTCATCACCCACTCCAGCGTCGCGAACGTGGTGTCCGTGCCGGCGACGAACATGTCCAGGACGAGGGCCTTGAGATTGTCGTCGGTTAGGGGGACCTCGAGGTCGGGGGATTTCTGGACGCGGAGGAGGACGTCGACGAAGTCCTCGTCGCGGTCGCCGGGGATGCGCTGGCGGTTGCCGCTGATGTGTTCGTCCACGATCACGTCGCAGGCCTCGCGGAGGTCGGCGAGGCACTTCTTGAGGCGGCGGCGGAGTCCGGTGACGGTGCTGGCGACGGGCTCGAGCTCGGGGAAGAAGTCGCCGATGGTGAACCCGGCGAAGAGGTCCTGCGCCTCGGCGAGCACCGCGCCGAGCTTGTCGCCCTCGCCGTGCGGGAACCGGCGGCCGAACGCGACGCGGCAGAGCACGTCGTTGGCGAGGTTGAGGAAGCACTCGCTGAGGTCGACGGGCTTCGCCGGCGAGGTGTTCTTGGTGAGGTGCGCGAGCAGGCGGCGGAGCTCCTTGACCCTGACGGCGCCGTACGTGGCGACGCGACGCGCCGACAGGAGCTCCGACACCACCACGCGGCGCGCCATCCGGTGGTACGGCCCCGCCGGCGCGAACGTCACGTCGGAGCAGCCGAACGACAGGAACTGGCCGGAGAGCAGGTGCGGCCGCGACGCCAGCGCGGCGTCGTTGGTGGTGAGCGCGGCGCGGGCGAGGTCCGGCTTGGAGATCACCACCGCCGGCACGCTCCCCAGCCGCATCCGGAACAGCGGCGCGCGCATGGTGCGCGCCAGCTCGGCCAGCGCGTGGTGCGGCATGCCGGACATGAGGTGGAGGTGCCCGATCACCGGCCACCCCGGCGGCGACGGCGGCAGCCGCCGTGGCTTTGACGACGACGACCGGCTCCTCCTCAACGCGACCAACACGTACGCCGCGGAGAGCACGAGCAGCGCGAGCGACATCGTCGACGCCATGGTGAGCTCCATATCGTCGAACACTTGGGGTGCACGTTTGGTCCAAGAAACTTAAGCAGCAATGGAGATGTGTTGG]
[-] EMBL AK071599 [GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGCAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACTAGCAACGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACTCCTCGACGCGGCCGCTGTCGCCGACGACTCGCCGGACCTCCTCCTGCGCCTTCTTGAGGATCCGTGGGTGGCGGACTAGCTCCGTCATCACCCACTCCAGCGTCGCGAACGTGGTGTCCGTGCCGGCGACGAACATGTCCAGGACGAGGGCCTTGAGATTGTCGTCGGTTAGGGGGACCTCGAGGTCGGGGGATTTCTGGACGCGGAGGAGGACGTCGACGAAGTCCTCGTCGCGGTCGCCGGGGATGCGCTGGCGGTTGCCGCTGATGTGTTCGTCCACGATCACGTCGCAGGCCTCGCGGAGGTCGGCGAGGCACTTCTTGAGGCGGCGGCGGAGTCCGGTGACGGTGCTGGCGACGGGCTCGAGCTCGGGGAAGAAGTCGCCGATGGTGAACCCGGCGAAGAGGTCCTGCGCCTCGGCGAGCACCGCGCCGAGCTTGTCGCCCTCGCCGTGCGGGAACCGGCGGCCGAACGCGACGCGGCAGAGCACGTCGTTGGCGAGGTTGAGGAAGCACTCGCTGAGGTCGACGGGCTTCGCCGGCGAGGTGTTCTTGGTGAGGTGCGCGAGCAGGCGGCGGAGCTCCTTGACCCTGACGGCGCCGTACGTGGCGACGCGACGCGCCGACAGGAGCTCCGACACCACCACGCGGCGCGCCATCCGGTGGTACGGCCCCGCCGGCGCGAACGTCACGTCGGAGCAGCCGAACGACAGGAACTGGCCGGAGAGCAGGTGCGGCCGCGACGCCAGCGCGGCGTCGTTGGTGGTGAGCGCGGCGCGGGCGAGGTCCGGCTTGGAGATCACCACCGCCGGCACGCTCCCCAGCCGCATCCGGAACAGCGGCGCGCGCATGGTGCGCGCCAGCTCGGCCAGCGCGTGGTGCGGCATGCCGGACATGAGGTGGAGGTGCCCGATCACCGGCCACCCCGGCGGCGACGGCGGCAGCCGCCGTGGCTTTGACGACGACGACCGGCTCCTCCTCAACGCGACCAACACGTACGCCGCGGAGAGCACGAGCAGCGCGAGCGACATCGTCGACGCCATGGTGAGCTCCATATCGTCGAACACTTGGGGTGCACGTTTGGTCCAAGAAACTTAAGCAGCAATGGAGATGTGTTGG]
[-] EMBL AF088221 [GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACGCGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGCAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGG GCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACTAGCAACGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACTCCTCGACGCGGCCGTTGTCGCCGACGACTCG ]
consensusID : consensus_11339#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence
[GTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACTCCTCGACGCGCCGCAAGCGATTCC]
[-] EMBL CB967075 [GTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACGTCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGTAGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACCCTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGCCGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCTCCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGTAGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGTGCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACTCCTCGACGCGCCGCAAGCGATTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11339#0 GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACG 60
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GCTAATCATTACTTAATTTAACTTAAACCTCACTAAGCTCCTCTCCCTTAAACTCGTACG 60
consensus_11339#0 CGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACG 120
consensus_11339#2 -GTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACG 59
consensus_11339#1 CGTCGCTCTTCCTGACGGCGACGAAGAGCGGCTCCTTCTTCCTCGTGGCGAGGCCGAACG 120
***********************************************************
consensus_11339#0 TCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGT 180
consensus_11339#2 TCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGT 119
consensus_11339#1 TCTCGTCGAGGTTGACGTCCTCGGCGCGCACGCCGGCGGGCAGCGCCCACTCGAAGTGGT 180
************************************************************
consensus_11339#0 AGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACC 240
consensus_11339#2 AGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACC 179
consensus_11339#1 AGAGCAAGCTGGCGAGCGACACCTGCACGGTGGCGAGCGCGAACGTGTAGCCGGGGCACC 240
************************************************************
consensus_11339#0 CTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGC 300
consensus_11339#2 CTCGCCGCCCGCCGCCGAACGGCAGGAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGC 239
consensus_11339#1 CTCGCCGCCCGCCGCCGAACGGCAGCAGCTTGTAGTCCGGGTCCTTGAGGTCGATCTCGC 300
************************* **********************************
consensus_11339#0 CGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCT 360
consensus_11339#2 CGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCT 299
consensus_11339#1 CGCCGCCGCCGGCGCTCTCGAACCTCTCCGGCGAGTACTCCAGCGGGTTGTCCCAGATCT 360
************************************************************
consensus_11339#0 CCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGT 420
consensus_11339#2 CCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGT 359
consensus_11339#1 CCGGGTCGCGCCCCATGGCGAACGTGTTGATGAACACCCGCGTCCTCGCCGGGATGTCGT 420
************************************************************
consensus_11339#0 AGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGT 480
consensus_11339#2 AGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACGAGCAGCGGCACCGCCGGGT 419
consensus_11339#1 AGCCGCCCAGCGTGCACGGCGCGACGGACTCGCGCGGCACTAGCAACGGCACCGCCGGGT 480
**************************************** **** **************
consensus_11339#0 GCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACT 540
consensus_11339#2 GCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACT 479
consensus_11339#1 GCAGCCGGAACGTCTCCTTGATGATGGCGCGCATGTAGTGGAGCTCGCCGAGGTGGGACT 540
************************************************************
consensus_11339#0 CCTCGACGCGGCCGCAAGCTATTCCGACTCGCCGGACCTCCTCCTGCGCCTTCTTGAGGA 600
consensus_11339#2 CCTCGACGCG-CCGCAAGCGATTCC----------------------------------- 503
consensus_11339#1 CCTCGACGCGGCCGCTGTCGCCGACGACTCGCCGGACCTCCTCCTGCGCCTTCTTGAGGA 600
********** **** * *
consensus_11339#0 TCCGTGGGTGGCGGACTAGCTCCGTCATCACCCACTCCAGCGTCGCGAACGTGGTGTCCG 660
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 TCCGTGGGTGGCGGACTAGCTCCGTCATCACCCACTCCAGCGTCGCGAACGTGGTGTCCG 660
consensus_11339#0 TGCCGGCGACGAACATGTCCTGGTGGTTGTTGTCACGTCATGTCAAGATCAGAGGAGGAG 720
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 TGCCGGCGACGAACATGTCCAGGACGAGGGCCTTGAGATTGTCGTCGGTTAGGGGGACCT 720
consensus_11339#0 CAACAATGGCGGCGAGTCAATTCGAGAGTTTTAATGGTGGGTATTAATGGCGTACCAGGA 780
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 CGAGGTCGGGGGATTTCTGGACGCGGAGGAGGACGTCGACGAAGTCCTCGTCGCGGTCGC 780
consensus_11339#0 CGAGGGCCTTGAGATTGTCGTCGGTTAGGGGGACCTCGAGGTCGGGGGATTTCTGGACGC 840
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 CGGGGATGCGCTGGCGGTTGCCGCTGATGTGTTCGTCCACGATCACGTCGCAGGCCTCGC 840
consensus_11339#0 GGAGGAGGACGTCGACGAAGTCCTCGTCGCGGTCGCCGGGGATGCGCTGGCGGTTGCCGC 900
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GGAGGTCGGCGAGGCACTTCTTGAGGCGGCGGCGGAGTCCGGTGACGGTGCTGGCGACGG 900
consensus_11339#0 TGATGTGTTCGTCCACGATCACGTCGCAGGCCTCGCGGAGGTCGGCGAGGCACTTCTTGA 960
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GCTCGAGCTCGGGGAAGAAGTCGCCGATGGTGAACCCGGCGAAGAGGTCCTGCGCCTCGG 960
consensus_11339#0 GGCGGCGGCGGAGTCCGGTGACGGTGCTGGCGACGGGCTCGAGCTCGGGGAAGAAGTCGC 1020
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 CGAGCACCGCGCCGAGCTTGTCGCCCTCGCCGTGCGGGAACCGGCGGCCGAACGCGACGC 1020
consensus_11339#0 CGATGGTGAACCCGGCGAAGAGGTCCTGCGCCTCGGCGAGCACCGCGCCGAGCTTGTCGC 1080
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GGCAGAGCACGTCGTTGGCGAGGTTGAGGAAGCACTCGCTGAGGTCGACGGGCTTCGCCG 1080
consensus_11339#0 CCTCGCCGTGCGGGAACCGGCGGCCGAACGCGACGCGGCAGAGCACGTCGTTGGCGAGGT 1140
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GCGAGGTGTTCTTGGTGAGGTGCGCGAGCAGGCGGCGGAGCTCCTTGACCCTGACGGCGC 1140
consensus_11339#0 TGAGGAAGCACTCGCTGAGGTCGACGGGCTTCGCCGGCGAGGTNTTCTTGGTGAGGTGCG 1200
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 CGTACGTGGCGACGCGACGCGCCGACAGGAGCTCCGACACCACCACGCGGCGCGCCATCC 1200
consensus_11339#0 CGAGCAGGCGGCGGAGCTCCTTGACCCTGGCGGCGCCGTACGTGCGAGCGCGACGCGCCG 1260
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GGTGGTACGGCCCCGCCGGCGCGAACGTCACGTCGGAGCAGCCGAACGACAGGAACTGGC 1260
consensus_11339#0 ACAGGAGCTCCGACACCACCACGCGGCGCGCCATCCGGTGGTACGGGCCCCGCCGGCGCG 1320
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 CGGAGAGCAGGTGCGGCCGCGACGCCAGCGCGGCGTCGTTGGTGGTGAGCGCGGCGCGGG 1320
consensus_11339#0 AACGTCACGTCGGAGCAGCCGAACGACAGGAACTGGCCGGAGAGCAGGTGCGGCCGCGAC 1380
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 CGAGGTCCGGCTTGGAGATCACCACCGCCGGCACGCTCCCCAGCCGCATCCGGAACAGCG 1380
consensus_11339#0 GCCAGCGCGGCGTCGTTGGTGGTGAGCGCGGCGCGGGCGAGGTCCGGCTTGGAGATCACC 1440
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GCGCGCGCATGGTGCGCGCCAGCTCGGCCAGCGCGTGGTGCGGCATGCCGGACATGAGGT 1440
consensus_11339#0 ACCGCCGGCACGCTCCCCAGCCGCATCCGGAACAGCGGCGCGCGCATGGTGCGCGCCAGC 1500
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 GGAGGTGCCCGATCACCGGCCACCCCGGCGGCGACGGCGGCAGCCGCCGTGGCTTTGACG 1500
consensus_11339#0 TCGGCCAGCGCGTGGTGCGGCATGCCGGACATGAGGTGGAGGTGCCCGATCACCGGCCAC 1560
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 ACGACGACCGGCTCCTCCTCAACGCGACCAACACGTACGCCGCGGAGAGCACGAGCAGCG 1560
consensus_11339#0 CCCGGCGGCGACGGCGGCAGCCGCCGTGGCTTTGACGACGACGACCGGCTCCTCCTCAAC 1620
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 CGAGCGACATCGTCGACGCCATGGTGAGCTCCATATCGTCGAACACTTGGGGTGCACGTT 1620
consensus_11339#0 GCGACCAACACGTACGCCGCGGAGAGCACGAGCAGCGCGAGCGACATCGTCGACGCCATG 1680
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 TGGTCCAAGAAACTTAAGCAGCAATGGAGATGTGTTGG---------------------- 1658
consensus_11339#0 GTGAGCTCCATATCGTCGAACACTTGGGGTGCACGTTTGGTCCAAGAAACTTAAGCAGCA 1740
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 ------------------------------------------------------------
consensus_11339#0 ATGGAGATGTGTTGGTATGAACTAACCGTGGTTAAGTGGGGAAGGGTTTATATAGTGGGT 1800
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 ------------------------------------------------------------
consensus_11339#0 GGTTGGTTGGAGGAGAGGTAGATGCACACGTTGGGCACTGAAGATTTTCATTAGATTTAT 1860
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 ------------------------------------------------------------
consensus_11339#0 CACATGAGTTGAAGAGATCAACGTTATCTGAGATCAAGGTGTGGAATGCGACAGATAGTG 1920
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 ------------------------------------------------------------
consensus_11339#0 TATACTTGTGTAGTACTCTAACTAGTAAGATGGATGTTGAAACAGCGAATTAATGTGGAA 1980
consensus_11339#2 ------------------------------------------------------------
consensus_11339#1 ------------------------------------------------------------
consensus_11339#0 TTAATTGCATCAAA 1994
consensus_11339#2 --------------
consensus_11339#1 --------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||