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Oryza sativa
cluster # 11351 cluster # 11351       Sequences # 8       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11351#0 length = 3294 sequences # 4  
consensus_11351#1 length = 1038 sequences # 1  
 consensus_11351#2 length = 905 sequences # 2  
consensus_11351#3 length = 816 sequences # 1  
consensusID : consensus_11351#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3294
fasta sequence 
                              [AACGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCCTTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAAGATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTTTGTTGCAACAATCTTTCAATACAAACGTGATTAATCAAATCAGCCCGTTATCACTGATATTGTGCCACCATATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTTATATTAGACCACTCTTTATGTTTCACTGTATTGATTTTGTTAATAGCTAAACTCAGTGCAATAACGTTTAAGATCTGATCCGCAATTATGTTTGTGGGAATCTTTAAAACTTTTTAATTTTGACAGCTCCTTGTTTATGAAAACATGTTGATTTGGTCAAACACGTACGTACTGGGATGGTTTTCTGGACACAACAGTAGGATTTTAGGAGGGTAGAAATTTATAGCAACATAATTTATGGGATGGAATATCAAATTTCAAGTGTTTTATACTGTGGTTTTTGTAAATTTCCGTATATTTTAGTTCGTGTCATCTTTTAACTCGTCCCACATCTGTGATCGTCTAGAACTATAGTATGTAGTAGTATGTAATAACTTATGATGTATTCCTACTAAGGAAATAATATTTCCATTGCCTGCCTGCTAATGCTTTTCAAATAATCAATATATCTATCTATCTATCTATCTATCTATCTATTATATACATACTAAAAGTCCATTAAACTTCCTACAAACGCTCTCAAGCCGCCACGTGAAACTCCTACAAACGCTCCTAGGTCGCCAAGTGGCTCTATCTAATCTAACCGTCGATTTTAACTTAAATTGGTGGACCCAATATTTTAGACCATTAGATTAGATTTTTACTTAAATCGGTGGACCCGGTATTTTAGACAATTAGATTAGATGTATTTTATTTTATTTTAAAGAAACTAATTCCTTACTCTATTACGTACGTATATGGGAGAAACACAACTGAAGTAACCAATAAAGCCTACCTATTGTTCGCGTCAAAAGAAAAAAAAGCTGCGCACAGAATTACTATAAAATCAATAAGAAAAAAAAACCATACGTACTTAGCACCATGGGAAAAAAATTGATGATATTTAAAATAGGATTTTCTATCATTTAAAGATAAAATATTTTACTCTATAAATTTACGTAAATATCACCGTTGATTTTCATTTAAATTGGCGGACCCGATCGATGTTTTAGAACATTAGATTAGATGTATCCATTATGTATACTTCCTAAAAATGCTCCTAATCCGCCATATGACATCCTGCAAACGTTCCTATGTTTCCATGTGATGCTCTAATAAATTAGTAAAATTCTACTTTGTCTCTCTGTCCTTTAAAAAAAAGTTTTGTTTCGGTATCAAATTTTGCTCCATAAAGAGTGTAATTTTTGGTTACAAAGAAACTTTTTAATGCTGCTTCGTCGATTTCTACTTCATTTAAGCACAAAACTAATAACAGTAGCTCCTTCTCCGATGCTTGTTTTCACCTCTCCTTATTCTATATGAAGGGTACAAGTAATTGTAATTATTTACCTTTTGTTTAACTTGTCTTTAACTAACTAAAATAATATTTTTTTAGAAATGAAGAGAGTATTAAGAAAGATATTAAAACACTACTATGATTTCATTAATATGGAGAAAATAAGGTGGGAGAAATAAGGAGGCATCTGGTTCAATGGCTAAAAACAACAAAGAAAAGGATGTAATAGCACTATTGAATTAGATTTAGCGTATCATTATAAAACTACACAATCAATTTTAGGGTCCAATTCTTAAACTAAAACTACACTTTTATATGGACAGACGGAGTAGAAAAAATAGAAATTAATTTTGAGTCCTCCGTATATAAGACGTGGGGATGCGTGCCCATGGGTGAAATAGCTTCTCTCCCTCTAGGCCTTCGAAGCGCAGGGGATGGTAGCTCCGGTCAAATTAATGTCGACAAGCCTACAAGATTGCTCTATGTCATCCCGCCTGTCGCTGGTCATCGTCCTGCTTGTTATCGTCGGCAGCACGGCCAGCACCGTTCCTCCTGTTGCCAGTTCAATGGAGAACTCTCCTTCCGGATATACTCTATAAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCAGGGCCAAAGCCAAGTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGTACAAATTAAGGTGGCTTCATCTCATCTGTAGAAAAATATGCAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACAGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGAATGAAAGAAGATGCAGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCATCCAAAATGTTAGTAGCAGAGAGTTTGCGAGAAAGCTGGTTATGCACGGTCTTCTCCATTACACGAAATGCAGTCCTCGGTAACGTGCGAATCGCACGCATTGAGAGGCAGAAGAACCATCCGGTCGTCGTGATGGGGATATCTCCGTGCTACTGCATTGCTTTTTTCTCTGCAAGCCCCGAAGCAAAGTTAAAATCTCGAGCTACATATGTCGGACAATCCTGTTGCCTCCCAATCCAAATTTTACTTTGGTTTTCGCTCTTGTTTGGATGGATCTTAATGTCGACTCATCACTCATGCATCGCTCATCCTCCTGGCCTTTGATATATATCCATGGGAACTACTAGAGAAAGGCTTTGTAGTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAAC]

[+] EMBL AK120168             [AACGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCCTTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAAGATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTTTGTTGCAACAATCTTTCAATACAAACGTGATTAATCAAATCAGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK072169             [  CGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCCTTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAAGATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTTTGTTGCAACAATCTTTCAATACAAACGTGATTAATCAAATCAGCCCGTTATCACTGATATTGTGCCACCATATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTTATATTAGACCACTCTTTATGTTTCACTGTATTGATTTTGTTAATAGCTAAACTCAGTGCAATAACGTTTAAGATCTGATCCGCAATTATGTTTGTGGGAATCTTTAAAACTTTTTAATTTTGACAGCTCCTTGTTTATGAAAACATGTTGATTTGGTCAAACACGTACGTACTGGGATGGTTTTCTGGACACAACAGTAGGATTTTAGGAGGGTAGAAATTTATAGCAACATAATTTATGGGATGGAATATCAAATTTCAAGTGTTTTATACTGTGGTTTTTGTAAATTTCCGTATATTTTAGTTCGTGTCATCTTTTAACTCGTCCCACATCTGTGATCGTCTAGAACTATAGTATGTAGTAGTATGTAATAACTTATGATGTATTCCTACTAAGGAAATAATATTTCCATTGCCTGCCTGCTAATGCTTTTCAAATAATCAATATATCTATCTATCTATCTATCTATCTATCTATTATATACATACTAAAAGTCCATTAAACTTCCTACAAACGCTCTCAAGCCGCCACGTGAAACTCCTACAAACGCTCCTAGGTCGCCAAGTGGCTCTATCTAATCTAACCGTCGATTTTAACTTAAATTGGTGGACCCAATATTTTAGACCATTAGATTAGATTTTTACTTAAATCGGTGGACCCGGTATTTTAGACAATTAGATTAGATGTATTTTATTTTATTTTAAAGAAACTAATTCCTTACTCTATTACGTACGTATATGGGAGAAACACAACTGAAGTAACCAATAAAGCCTACCTATTGTTCGCGTCAAAAGAAAAAAAAGCTGCGCACAGAATTACTATAAAATCAATAAGAAAAAAAAACCATACGTACTTAGCACCATGGGAAAAAAATTGATGATATTTAAAATAGGATTTTCTATCATTTAAAGATAAAATATTTTACTCTATAAATTTACGTAAATATCACCGTTGATTTTCATTTAAATTGGCGGACCCGATCGATGTTTTAGAACATTAGATTAGATGTATCCATTATGTATACTTCCTAAAAATGCTCCTAATCCGCCATATGACATCCTGCAAACGTTCCTATGTTTCCATGTGATGCTCTAATAAATTAGTAAAATTCTACTTTGTCTCTCTGTCCTTTAAAAAAAAGTTTTGTTTCGGTATCAAATTTTGCTCCATAAAGAGTGTAATTTTTGGTTACAAAGAAACTTTTTAATGCTGCTTCGTCGATTTCTACTTCATTTAAGCACAAAACTAATAACAGTAGCTCCTTCTCCGATGCTTGTTTTCACCTCTCCTTATTCTATATGAAGGGTACAAGTAATTGTAATTATTTACCTTTTGTTTAACTTGTCTTTAACTAACTAAAATAATATTTTTTTAGAAATGAAGAGAGTATTAAGAAAGATATTAAAACACTACTATGATTTCATTAATATGGAGAAAATAAGGTGGGAGAAATAAGGAGGCATCTGGTTCAATGGCTAAAAACAACAAAGAAAAGGATGTAATAGCACTATTGAATTAGATTTAGCGTATCATTATAAAACTACACAATCAATTTTAGGGTCCAATTCTTAAACTAAAACTACACTTTTATATGGACAGACGGAGTAGAAAAAATAGAAATTAATTTTGAGTCCTCCGTATATAAGACGTGGGGATGCGTGCCCATGGGTGAAATAGCTTCTCTCCCTCTAGGCCTTCGAAGCGCAGGGGATGGTAGCTCCGGTCAAATTAATGTCGACAAGCCTACAAGATTGCTCTATGTCATCCCGCCTGTCGCTGGTCATCGTCCTGCTTGTTATCGTCGGCAGCACGGCCAGCACCGTTCCTCCTGTTGCCAGTTCAATGGAGAACTCTCCTTCCGGATATACTCTATAAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCAGGGCCAAAGCCAAGTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGTACAAATTAAGGTGGCTTCATCTCATCTGTAGAAAAATATGCAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACAGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGAATGAAAGAAGATGCAGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCATCCAAAATGTTAGTAGCAGAGAGTTTGCGAGAAAGCTGGTTATGCACGGTCTTCTCCATTACACGAAATGCAGTCCTCGGTAACGTGCGAATCGCACGCATTGAGAGGCAGAAGAACCATCCGGTCGTCGTGATGGGGATATCTCCGTGCTACTGCATTGCTTTTTTCTCTGCAAGCCCCGAAGCAAAGTTAAAATCTCGAGCTACATATGTCGGACAATCCTGTTGCCTCCCAATCCAAATTTTACTTTGGTTTTCGCTCTTGTTTGGATGGATCTTAATGTCGACTCATCACTCATGCATCGCTCATCCTCCTGGCCTTTGATATATATCCATGGGAACTACTAGAGAAAGGCTTTGTAGTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAAC]
[+] EMBL CF295054             [        CAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCCTTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAAGATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTTTGTTGCAACAATCTTTCAATACAAACGTGATTAATCAAAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF295055             [                                                                                                        AACCTCCTCCTTTCAAGATCAGCTTTTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTTTGTTGCAACAATCTTTCAATACAAACGTGATTAATCAAAaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_11351#0
AACGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCC
TTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAA
GATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCA
TCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATC
ACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGA
GCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTA
ACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTTT
GTTGCAACAATCTTTCAATACAAACGTGATTAATCAAATCAGCCCGTTATCACTGATATT
GTGCCACCATATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTTATATTAGACCACT
CTTTATGTTTCACTGTATTGATTTTGTTAATAGCTAAACTCAGTGCAATAACGTTTAAGA
TCTGATCCGCAATTATGTTTGTGGGAATCTTTAAAACTTTTTAATTTTGACAGCTCCTTG
TTTATGAAAACATGTTGATTTGGTCAAACACGTACGTACTGGGATGGTTTTCTGGACACA
ACAGTAGGATTTTAGGAGGGTAGAAATTTATAGCAACATAATTTATGGGATGGAATATCA
AATTTCAAGTGTTTTATACTGTGGTTTTTGTAAATTTCCGTATATTTTAGTTCGTGTCAT
CTTTTAACTCGTCCCACATCTGTGATCGTCTAGAACTATAGTATGTAGTAGTATGTAATA
ACTTATGATGTATTCCTACTAAGGAAATAATATTTCCATTGCCTGCCTGCTAATGCTTTT
CAAATAATCAATATATCTATCTATCTATCTATCTATCTATCTATTATATACATACTAAAA
GTCCATTAAACTTCCTACAAACGCTCTCAAGCCGCCACGTGAAACTCCTACAAACGCTCC
TAGGTCGCCAAGTGGCTCTATCTAATCTAACCGTCGATTTTAACTTAAATTGGTGGACCC
AATATTTTAGACCATTAGATTAGATTTTTACTTAAATCGGTGGACCCGGTATTTTAGACA
ATTAGATTAGATGTATTTTATTTTATTTTAAAGAAACTAATTCCTTACTCTATTACGTAC
GTATATGGGAGAAACACAACTGAAGTAACCAATAAAGCCTACCTATTGTTCGCGTCAAAA
GAAAAAAAAGCTGCGCACAGAATTACTATAAAATCAATAAGAAAAAAAAACCATACGTAC
TTAGCACCATGGGAAAAAAATTGATGATATTTAAAATAGGATTTTCTATCATTTAAAGAT
AAAATATTTTACTCTATAAATTTACGTAAATATCACCGTTGATTTTCATTTAAATTGGCG
GACCCGATCGATGTTTTAGAACATTAGATTAGATGTATCCATTATGTATACTTCCTAAAA
ATGCTCCTAATCCGCCATATGACATCCTGCAAACGTTCCTATGTTTCCATGTGATGCTCT
AATAAATTAGTAAAATTCTACTTTGTCTCTCTGTCCTTTAAAAAAAAGTTTTGTTTCGGT
ATCAAATTTTGCTCCATAAAGAGTGTAATTTTTGGTTACAAAGAAACTTTTTAATGCTGC
TTCGTCGATTTCTACTTCATTTAAGCACAAAACTAATAACAGTAGCTCCTTCTCCGATGC
TTGTTTTCACCTCTCCTTATTCTATATGAAGGGTACAAGTAATTGTAATTATTTACCTTT
TGTTTAACTTGTCTTTAACTAACTAAAATAATATTTTTTTAGAAATGAAGAGAGTATTAA
GAAAGATATTAAAACACTACTATGATTTCATTAATATGGAGAAAATAAGGTGGGAGAAAT
AAGGAGGCATCTGGTTCAATGGCTAAAAACAACAAAGAAAAGGATGTAATAGCACTATTG
AATTAGATTTAGCGTATCATTATAAAACTACACAATCAATTTTAGGGTCCAATTCTTAAA
CTAAAACTACACTTTTATATGGACAGACGGAGTAGAAAAAATAGAAATTAATTTTGAGTC
CTCCGTATATAAGACGTGGGGATGCGTGCCCATGGGTGAAATAGCTTCTCTCCCTCTAGG
CCTTCGAAGCGCAGGGGATGGTAGCTCCGGTCAAATTAATGTCGACAAGCCTACAAGATT
GCTCTATGTCATCCCGCCTGTCGCTGGTCATCGTCCTGCTTGTTATCGTCGGCAGCACGG
CCAGCACCGTTCCTCCTGTTGCCAGTTCAATGGAGAACTCTCCTTCCGGATATACTCTAT
AAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGA
GTCAGGGCCAAAGCCAAGTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTC
TTACAGTACAAATTAAGGTGGCTTCATCTCATCTGTAGAAAAATATGCAATGACACACAT
TTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGA
ATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCA
CAGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACAT
CGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAA
CCACTGAATGAAAGAAGATGCAGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCT
GCTCATCCAAAATGTTAGTAGCAGAGAGTTTGCGAGAAAGCTGGTTATGCACGGTCTTCT
CCATTACACGAAATGCAGTCCTCGGTAACGTGCGAATCGCACGCATTGAGAGGCAGAAGA
ACCATCCGGTCGTCGTGATGGGGATATCTCCGTGCTACTGCATTGCTTTTTTCTCTGCAA
GCCCCGAAGCAAAGTTAAAATCTCGAGCTACATATGTCGGACAATCCTGTTGCCTCCCAA
TCCAAATTTTACTTTGGTTTTCGCTCTTGTTTGGATGGATCTTAATGTCGACTCATCACT
CATGCATCGCTCATCCTCCTGGCCTTTGATATATATCCATGGGAACTACTAGAGAAAGGC
TTTGTAGTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAAC

consensusID : consensus_11351#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1038
fasta sequence 
                              [AGCCCGCGGGNNNNNNNATTTTAAGGTTTGATCAACCACATNAGNANNNCNCCNNNNNNNNNNNTNTNNNNNNNNNNNNNNNCCNNNNNNNNGNNNNNNGNNCGAGTATACAACGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCCTTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAAGATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTNTGTTGCAACAATCTTTCAATACCAACCGTGATAATCAAATCAGCCCGTTATCACTGATATTGTGCACCATATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTATATTANACCACTCTTTATGTTCACTGATATGATTTTGTATAGCTAAACTAGTGCAATACGTTTAGAACTGATCGCAATATTGTTGTGGATCTTATNAANAAANNNNNANNNTATNNAANNTAATAAATNTATNANNTTTATTAAAANTTAGGGGGAGAGGGCCTGGGGGCCTCGTCCTTTTTCCTTTGTGTTGTGCCCACAGGCGGGTAAAAAGGGGGGGAAATGTGCTCATATCTTCCCCGCTTCCATGAAGGAAAGAACCACGCCCCTAATGTGCCTCATTAAGTTGGTAGGAGCGGGGGGAGGGCGCGCCACCCCCCCTTTTCTTTTTTCCTTTTTNATTTTGNGTTGTGTTTTTTATGTCTGTTNGGTGTGGCCCACGCCGCGGCCGCCCCCATTGT]

[+] EMBL AW155264             [AGCCCGCGGGNNNNNNNATTTTAAGGTTTGATCAACCACATNAGNANNNCNCCNNNNNNNNNNNTNTNNNNNNNNNNNNNNNCCNNNNNNNNGNNNNNNGNNCGAGTATACAACGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCCTTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAAGATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTNTGTTGCAACAATCTTTCAATACCAACCGTGATAATCAAATCAGCCCGTTATCACTGATATTGTGCACCATATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTATATTANACCACTCTTTATGTTCACTGATATGATTTTGTATAGCTAAACTAGTGCAATACGTTTAGAACTGATCGCAATATTGTTGTGGATCTTATNAANAAANNNNNANNNTATNNAANNTAATAAATNTATNANNTTTATTAAAANTTAGGGGGAGAGGGCCTGGGGGCCTCGTCCTTTTTCCTTTGTGTTGTGCCCACAGGCGGGTAAAAAGGGGGGGAAATGTGCTCATATCTTCCCCGCTTCCATGAAGGAAAGAACCACGCCCCTAATGTGCCTCATTAAGTTGGTAGGAGCGGGGGGAGGGCGCGCCACCCCCCCTTTTCTTTTTTCCTTTTTNATTTTGNGTTGTGTTTTTTATGTCTGTTNGGTGTGGCCCACGCCGCGGCCGCCCCCATTGT]




>consensus_11351#1
AGCCCGCGGGNNNNNNNATTTTAAGGTTTGATCAACCACATNAGNANNNCNCCNNNNNNN
NNNNTNTNNNNNNNNNNNNNNNCCNNNNNNNNGNNNNNNGNNCGAGTATACAACGGAAGC
AGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCCTTCTCTCAA
CCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAAGATCAGCTT
CTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCATCTGTCCTG
GTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATCACGCGCCAG
CCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGAGCGAGGTGA
AAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTAACGTTTGAT
GTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTNTGTTGCAACA
ATCTTTCAATACCAACCGTGATAATCAAATCAGCCCGTTATCACTGATATTGTGCACCAT
ATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTATATTANACCACTCTTTATGTTCA
CTGATATGATTTTGTATAGCTAAACTAGTGCAATACGTTTAGAACTGATCGCAATATTGT
TGTGGATCTTATNAANAAANNNNNANNNTATNNAANNTAATAAATNTATNANNTTTATTA
AAANTTAGGGGGAGAGGGCCTGGGGGCCTCGTCCTTTTTCCTTTGTGTTGTGCCCACAGG
CGGGTAAAAAGGGGGGGAAATGTGCTCATATCTTCCCCGCTTCCATGAAGGAAAGAACCA
CGCCCCTAATGTGCCTCATTAAGTTGGTAGGAGCGGGGGGAGGGCGCGCCACCCCCCCTT
TTCTTTTTTCCTTTTTNATTTTGNGTTGTGTTTTTTATGTCTGTTNGGTGTGGCCCACGC
CGCGGCCGCCCCCATTGT

consensusID : consensus_11351#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 905
fasta sequence 
                              [TTATAATATGGCACAGATACTCTATAAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCAGGGCCAAAGCCAAGCTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGAAAAATATGCAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACGGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGAATGAAAGAAGATGCAGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCATCCAAAATGTTAGTAGCAGAGAGTTTGCGAGAAAGCTGGTTATGCACGGTCTTCTCCATTACACGAAATGCAGTCCTCGGTAACGTGCGAATCGCACGCATTGAGAGGCAGAAGAACCATCCGGTCGTCGTGATGGGGATATCTCCGTGCTACTGCATTGCTTTTTTCTCTGCAAGCCCCGAAGCAAAGTTAAAATCTCGAGCTACATATGTCGGACAATCCTGTTGCCTCCCAATCCAAATTTTACTTTGGTTTTCGCTCTTGTTTGGATGGATCTTAATGTCGACTCATCACTCATGCATCGCTCATCCTCCTGGCCTTTGATATATATCCATGGGAACTACTAGAGAAAGGCTTTGTAGTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAACATTTATTCTCAAATCCC]

[+] EMBL CB667196             [TTATAATATGGCACAGATACTCTATAAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCAGGGCCAAAGCCAAGCTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGAAAAATATGCAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACGGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGAATGAAAGAAGATGCAGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCATCCAAAATGTTAGTAGCAGAGAGTTTGCGAGAAAGCTGGTTATGCACGGTCTTCTCCATTACACGAAATGCAGTCCTCGGTAACGTGCGAATCGCACGCATTGAGAGGCAGAAGAACCATCCGGTCGTCGTGATGGGGATATCTCCGTGCTACTGCATTGCTTTTTTCTCTGCAAGCCCCGAAGCAAAGTTAAAATCTCGAGCTACATATGTCGGACAATCCTGTTGCCTCCCAATCCAAATTTTACTTTGGTTTTCGCTCTTGTTTGGATGGATCTTAATGTCGACTCATCACTCATGCATCGCTCATCCTCCTGGCCTTTGATATATATCCATGGGAACTACTAGAGAAAGGCTTTGTAGTCTCGCTTGGGAAC                                                  ]
[-] EMBL CB667197             [                                                                                          GGCCAAAGCCAAG TGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGAAAAATATGCAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACGGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGAATGAAAGAAGATGCAGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCATCCAAAATGTTAGTAGCAGAGAGTTTGCGAGAAAGCTGGTTATGCACGGTCTTCTCCATTACACGAAATGCAGTCCTCGGTAACGTGCGAATCGCACGCATTGAGAGGCAGAAGAACCATCCGGTCGTCGTGATGGGGATATCTCCGTGCTACTGCATTGCTTTTTTCTCTGCAAGCCCCGAAGCAAAGTTAAAATCTCGAGCTACATATGTCGGACAATCCTGTTGCCTCCCAATCCAAATTTTACTTTGGTTTTCGCTCTTGTTTGGATGGATCTTAATGTCGACTCATCACTCATGCATCGCTCATCCTCCTGGCCTTTGATATATATCCATGGGAACTACTAGAGAAAGGCTTTGTAGTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAACATTTATTCTCAAATCCC]




>consensus_11351#2
TTATAATATGGCACAGATACTCTATAAGTACATACAAGAACTGAAAGTAATAAAAATTCA
ACCAGCATTTGCTGACTTGTCATGAGTCAGGGCCAAAGCCAAGCTGGTGTCCATCTGGCT
CCATCACGCTGTCCATGGGCCATTTCTTACAGAAAAATATGCAATGACACACATTTGGCC
AACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAA
GATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACGGTAT
CATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGAC
AGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTG
AATGAAAGAAGATGCAGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCAT
CCAAAATGTTAGTAGCAGAGAGTTTGCGAGAAAGCTGGTTATGCACGGTCTTCTCCATTA
CACGAAATGCAGTCCTCGGTAACGTGCGAATCGCACGCATTGAGAGGCAGAAGAACCATC
CGGTCGTCGTGATGGGGATATCTCCGTGCTACTGCATTGCTTTTTTCTCTGCAAGCCCCG
AAGCAAAGTTAAAATCTCGAGCTACATATGTCGGACAATCCTGTTGCCTCCCAATCCAAA
TTTTACTTTGGTTTTCGCTCTTGTTTGGATGGATCTTAATGTCGACTCATCACTCATGCA
TCGCTCATCCTCCTGGCCTTTGATATATATCCATGGGAACTACTAGAGAAAGGCTTTGTA
GTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAACATTTATTCTCAA
ATCCC

consensusID : consensus_11351#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 816
fasta sequence 
                              [GACCGCCATACTTCGGGGGGCGGGGTAATTCGTACTTTTTCCTATATTAAATATTACACTATACTACAAGCAAAATATCACCTCAGTGGCTCTGTGTCACAGCATTTTAAGTGATACTTCTATGACACAAAGTATTCTTGCTGTTTTATCTATGCATGGCATTTATAATGATCATGCCAAATCGTATGAAATAATTTGAGTTTATCGATTATAATATGGCACAGATACTCTATAAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCAGGGCCAAAGCCAAGTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGGTCCGTGTTAATTATATGTATAACTGTTTAAAAAAAATTATATGTATAGCAAAAATTGATCTCGTGACAAGTTGTTGATGATTTTTTTGATGGATGGATGGTTATTATTTTTAGTACAAATTAAGGTGGCTTCATCTCATCTGTAGAAAAATATGCAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACGGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGGTATGTCAGACAGTCCCGATGCCTCCCAAATCTACCACTGCAC]

[+] EMBL CB642567             [GACCGCCATACTTCGGGGGGCGGGGTAATTCGTACTTTTTCCTATATTAAATATTACACTATACTACAAGCAAAATATCACCTCAGTGGCTCTGTGTCACAGCATTTTAAGTGATACTTCTATGACACAAAGTATTCTTGCTGTTTTATCTATGCATGGCATTTATAATGATCATGCCAAATCGTATGAAATAATTTGAGTTTATCGATTATAATATGGCACAGATACTCTATAAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCAGGGCCAAAGCCAAGTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGGTCCGTGTTAATTATATGTATAACTGTTTAAAAAAAATTATATGTATAGCAAAAATTGATCTCGTGACAAGTTGTTGATGATTTTTTTGATGGATGGATGGTTATTATTTTTAGTACAAATTAAGGTGGCTTCATCTCATCTGTAGAAAAATATGCAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAGCTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACGGTATCATGCATCTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGGTATGTCAGACAGTCCCGATGCCTCCCAAATCTACCACTGCAC]




>consensus_11351#3
GACCGCCATACTTCGGGGGGCGGGGTAATTCGTACTTTTTCCTATATTAAATATTACACT
ATACTACAAGCAAAATATCACCTCAGTGGCTCTGTGTCACAGCATTTTAAGTGATACTTC
TATGACACAAAGTATTCTTGCTGTTTTATCTATGCATGGCATTTATAATGATCATGCCAA
ATCGTATGAAATAATTTGAGTTTATCGATTATAATATGGCACAGATACTCTATAAGTACA
TACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCAGGG
CCAAAGCCAAGTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGCCATTTCTTACAGG
TCCGTGTTAATTATATGTATAACTGTTTAAAAAAAATTATATGTATAGCAAAAATTGATC
TCGTGACAAGTTGTTGATGATTTTTTTGATGGATGGATGGTTATTATTTTTAGTACAAAT
TAAGGTGGCTTCATCTCATCTGTAGAAAAATATGCAATGACACACATTTGGCCAACTCCA
CTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTTGACAAAGTGAATCAAAGATATAG
CTTGACGTTACACCGAGATGACCTGGTGAAGTAGGTTGCAAGCTGCACGGTATCATGCAT
CTAGGGCTCGCAGATCTCGATCATGGGTGAAGATAAGACATGGACATCGAGACAGTTTCG
CCTCTGTACGAGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGGTATGTC
AGACAGTCCCGATGCCTCCCAAATCTACCACTGCAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      AACGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCCC 60
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCAA 120
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCCA 180
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAATC 240
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      ACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAAAGGGA 300
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCATTTA 360
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      ACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAGTTTT 420
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GTTGCAACAATCTTTCAATACAAACGTGATTAATCAAATCAGCCCGTTATCACTGATATT 480
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GTGCCACCATATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTTATATTAGACCACT 540
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      CTTTATGTTTCACTGTATTGATTTTGTTAATAGCTAAACTCAGTGCAATAACGTTTAAGA 600
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TCTGATCCGCAATTATGTTTGTGGGAATCTTTAAAACTTTTTAATTTTGACAGCTCCTTG 660
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TTTATGAAAACATGTTGATTTGGTCAAACACGTACGTACTGGGATGGTTTTCTGGACACA 720
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      ACAGTAGGATTTTAGGAGGGTAGAAATTTATAGCAACATAATTTATGGGATGGAATATCA 780
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      AATTTCAAGTGTTTTATACTGTGGTTTTTGTAAATTTCCGTATATTTTAGTTCGTGTCAT 840
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      CTTTTAACTCGTCCCACATCTGTGATCGTCTAGAACTATAGTATGTAGTAGTATGTAATA 900
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      ACTTATGATGTATTCCTACTAAGGAAATAATATTTCCATTGCCTGCCTGCTAATGCTTTT 960
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      CAAATAATCAATATATCTATCTATCTATCTATCTATCTATCTATTATATACATACTAAAA 1020
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GTCCATTAAACTTCCTACAAACGCTCTCAAGCCGCCACGTGAAACTCCTACAAACGCTCC 1080
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TAGGTCGCCAAGTGGCTCTATCTAATCTAACCGTCGATTTTAACTTAAATTGGTGGACCC 1140
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      AATATTTTAGACCATTAGATTAGATTTTTACTTAAATCGGTGGACCCGGTATTTTAGACA 1200
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      ATTAGATTAGATGTATTTTATTTTATTTTAAAGAAACTAATTCCTTACTCTATTACGTAC 1260
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GTATATGGGAGAAACACAACTGAAGTAACCAATAAAGCCTACCTATTGTTCGCGTCAAAA 1320
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GAAAAAAAAGCTGCGCACAGAATTACTATAAAATCAATAAGAAAAAAAAACCATACGTAC 1380
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TTAGCACCATGGGAAAAAAATTGATGATATTTAAAATAGGATTTTCTATCATTTAAAGAT 1440
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      AAAATATTTTACTCTATAAATTTACGTAAATATCACCGTTGATTTTCATTTAAATTGGCG 1500
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GACCCGATCGATGTTTTAGAACATTAGATTAGATGTATCCATTATGTATACTTCCTAAAA 1560
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      ATGCTCCTAATCCGCCATATGACATCCTGCAAACGTTCCTATGTTTCCATGTGATGCTCT 1620
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      AATAAATTAGTAAAATTCTACTTTGTCTCTCTGTCCTTTAAAAAAAAGTTTTGTTTCGGT 1680
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      ATCAAATTTTGCTCCATAAAGAGTGTAATTTTTGGTTACAAAGAAACTTTTTAATGCTGC 1740
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TTCGTCGATTTCTACTTCATTTAAGCACAAAACTAATAACAGTAGCTCCTTCTCCGATGC 1800
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TTGTTTTCACCTCTCCTTATTCTATATGAAGGGTACAAGTAATTGTAATTATTTACCTTT 1860
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      TGTTTAACTTGTCTTTAACTAACTAAAATAATATTTTTTTAGAAATGAAGAGAGTATTAA 1920
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GAAAGATATTAAAACACTACTATGATTTCATTAATATGGAGAAAATAAGGTGGGAGAAAT 1980
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      AAGGAGGCATCTGGTTCAATGGCTAAAAACAACAAAGAAAAGGATGTAATAGCACTATTG 2040
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      AATTAGATTTAGCGTATCATTATAAAACTACACAATCAATTTTAGGGTCCAATTCTTAAA 2100
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      CTAAAACTACACTTTTATATGGACAGACGGAGTAGAAAAAATAGAAATTAATTTTGAGTC 2160
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      CTCCGTATATAAGACGTGGGGATGCGTGCCCATGGGTGAAATAGCTTCTCTCCCTCTAGG 2220
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      CCTTCGAAGCGCAGGGGATGGTAGCTCCGGTCAAATTAATGTCGACAAGCCTACAAGATT 2280
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      ------------------------------------------------------------
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      GCTCTATGTCATCCCGCCTGTCGCTGGTCATCGTCCTGCTTGTTATCGTCGGCAGCACGG 2340
consensus_11351#1      ------------------------------------------------------------
                                                                                   

consensus_11351#2      -----------------------------------TTATAATATGGCACAGATACTCTAT 25
consensus_11351#3      ------------------------------------------------------------
consensus_11351#0      CCAGCACCGTTCCTCCTGTTGCCAGTTCAATGGAGAACTCTCCTTCCGGATATACTCTAT 2400
consensus_11351#1      ----------AGCCCGCGGGNNNNNNNATTTTAAGGTTTGATCAACCACATNAGNANNNC 50
                                                                                   

consensus_11351#2      AAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTG-ACTTGTCATG 84
consensus_11351#3      ---GACCGCCATACTTCGGGGGGCGGGGTAATTCG--TACTTTTTCCTATATTAAATATT 55
consensus_11351#0      AAGTACATACAAGAACTGAAAGTAATAAAAATTCAACCAGCATTTGCTG-ACTTGTCATG 2459
consensus_11351#1      NCCNNNNNNNNNNNTNTNNNNNNNNNNNNNNNCCNNNNNNNNGNNNNNNGNNCGAGTATA 110
                                                        *                       ** 

consensus_11351#2      AGTCAGGGCCAAAGCCAAGCTGGTGTCCATCTGGC--TCCATCACGCTGTCCATGGGCCA 142
consensus_11351#3      ACACTATACTACAAGCAAAATATCACCTCAGTGGC--TCTGTGTCACAGCATTTTAAGTG 113
consensus_11351#0      AGTCAGGGCCAAAGCCAAG-TGGTGTCCATCTGGC--TCCATCACGCTGTCCATGGGCCA 2516
consensus_11351#1      CAACGGAAGCAGGACTTCGCTGCTGACCATATGACGACCTCGGCGATAAGACTGCAATCC 170
                          *      *         *     *    ** *   *                     

consensus_11351#2      TTTCTTA--------------------------------CAGAAAAATATGCAATGACAC 170
consensus_11351#3      ATACTTC--------------------------------TATGACACAAAGTATTCTTGC 141
consensus_11351#0      TTTCTTACAGTACAAATTAAGGTGGCTTCATCTCATCTGTAGAAAAATATGCAATGACAC 2576
consensus_11351#1      CTTCTCTCAACCTTGTTGCTAGTGTTCCTGCTTCTCACCGGCAGCAACCTCCTCCTTTCA 230
                        * **                                        *              

consensus_11351#2      ACATTTGGCCA---ACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTT--- 224
consensus_11351#3      TGTTTTATCTATGCATGGCATTTATAATGATCATGCCA-AATCGTATGAAATAATTT--- 197
consensus_11351#0      ACATTTGGCCA---ACTCCACTCAACATAGTTTTGTTGCGACTACACTAAGGAAGTT--- 2630
consensus_11351#1      AGATCAGCTTCTACGCACCGACCAAGCCCTTGTACCTTGGACCCCACCAATCCATCTCCC 290
                          *              *    *      *         *    *  **   *  *   

consensus_11351#2      ----GACAAAGTGAA-----TCAAAGATATAGCTTGACGTTACACCGAGATGACCTG--- 272
consensus_11351#3      ----GAGTTTATCGA-----TTATA-ATATGGCACA--GATACTCTATAAGTACATA--- 242
consensus_11351#0      ----GACAAAGTGAA-----TCAAAGATATAGCTTGACGTTACACCGAGATGACCTG--- 2678
consensus_11351#1      ATCTGTCCTGGTCAAGCTCCTTCCCCGTATTGTCCCCAACCGCCATGTCACAACATGAAT 350
                           *      *  *     *      *** *          *      *  ** *    

consensus_11351#2      GTGAAGTAGGTTGCA-AGCTGCACGGTATCATGCATCTAGGGCTCGCAGATCTCGA-TCA 330
consensus_11351#3      CAAGAAC----TGAA-AGTAATAAAAATTCAACCAGCATTTGCTGACTTGTCATGAGTCA 297
consensus_11351#0      GTGAAGTAGGTTGCA-AGCTGCACAGTATCATGCATCTAGGGCTCGCAGATCTCGA-TCA 2736
consensus_11351#1      CACGCGCCAGCCACGGAGCAACAGGGTGCACATTTGCCTTAAGTAGCAGATGGTAA---A 407
                                       **    *             *      *  *   *    *   *

consensus_11351#2      TGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACA----TCA 386
consensus_11351#3      GGGCCAAAGCCAAGTGGTGTCCATCTGGCTCCATCACGCTGTCCATGGGC-CA----TTT 352
consensus_11351#0      TGGGTGAAGATAAGACATGGACATCGAGACAGTTTCGCCTCTGTACGAGAACA----TCA 2792
consensus_11351#1      GGGAGCGAGGTGAAAAACGTATATATATTCAGGGAAAATTTCAAACCACCCCAAAAGTCA 467
                        **    **   *     *   **               *    *      **    *  

consensus_11351#2      CCGAAACATAGAAGAAGTTTGATACAAACCACTGAATGAAAGAAGAT-----------GC 435
consensus_11351#3      CTTACAGGTCCGTGTTAATT-ATATGTATAACTGTTTAAAAAAAATT-----------AT 400
consensus_11351#0      CCGAAACATAGAAGAAGTTTGATACAAACCACTGAATGAAAGAAGAT-----------GC 2841
consensus_11351#1      TTTAACGTTTGATGTTTCACCCTATAAGTAATTTTGTTGGAAAAGCCTCCCACCACCCAG 527
                          *    *    *        **      * *   *   * **                

consensus_11351#2      AGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCATCCAAAATGTTAGTAG 495
consensus_11351#3      ATGTATAGCAAAAATTGATCTCGTGACAAGTTGTTGATGATTTTTTTGATGGATGGATGG 460
consensus_11351#0      AGTTATTTCAGCAATTCAGCTGCCGCGCCTCCAATCTCTGCTCATCCAAAATGTTAGTAG 2901
consensus_11351#1      TTNTGTTGCAACAATC--TTTCAATACCAACCG-TGATAATCAAATCAGCCCGTTATCAC 584
                          * *  **  ***     *             *                  *      

consensus_11351#2      CAGAGAGTTTGCGAGAAAGCTGGTTATGC----ACGGTCTTCTCC--ATTACACGAAATG 549
consensus_11351#3      TTATTATTTTTAGTACAAATTAAGGTGGC----TTCATCTCATCT--GTAGAAAAATATG 514
consensus_11351#0      CAGAGAGTTTGCGAGAAAGCTGGTTATGC----ACGGTCTTCTCC--ATTACACGAAATG 2955
consensus_11351#1      TGATATTGTGCACCATATGCTAAACTAGCCGAGTTAATCTTGTCTAGGTGCTATATTANA 644
                               *       *   *      **        ***  **    *   *    *  

consensus_11351#2      CAGTCCTCGGTAACGTGCGAATCGCACGCATTG-AGAGGCAGAAGAACCATCC-GGTCGT 607
consensus_11351#3      CAATGACACACATTTGGCCAACTCCACTCAACATAGTTTTGTTGCGACTACAC-TAAGGA 573
consensus_11351#0      CAGTCCTCGGTAACGTGCGAATCGCACGCATTG-AGAGGCAGAAGAACCATCC-GGTCGT 3013
consensus_11351#1      CCACTCTTTATGTTC-ACTGATATGATTTTGTATAGCTAAACTAGTGCAATACGTTTAGA 703
                       *                *  *    *        **           * *  *     * 

consensus_11351#2      CGTGATGGGGATATCTCCGTGC-------TACTGCATTGCTTTTTTCTCTGCAAGCCCCG 660
consensus_11351#3      AGTTGACAAAGTGAATCAAAGA-------TATAGC-TTGACGTTACACCGAGATGACCTG 625
consensus_11351#0      CGTGATGGGGATATCTCCGTGC-------TACTGCATTGCTTTTTTCTCTGCAAGCCCCG 3066
consensus_11351#1      ACTGATCGCAATATTGTTGTGGATCTTATNAANAAANNNNNANNNTATNNAANNTAATAA 763
                         *        *        *         *                             

consensus_11351#2      AAGCAAAGTTAAAATCTCGAGCTACATA----TGTCGGACAATCCTGTTGCCTCCCAATC 716
consensus_11351#3      --GTGAAGT--AGGTTGCAAGCTGCACGG---TATCATGCA--TCTAGGGCTCGCAGATC 676
consensus_11351#0      AAGCAAAGTTAAAATCTCGAGCTACATA----TGTCGGACAATCCTGTTGCCTCCCAATC 3122
consensus_11351#1      ATNTATNANNTTTATTAAAANTTAGGGGGAGAGGGCCTGGGGGCCTCGTCCTTTTTCCTT 823
                                     *    *  *            *        **    *       * 

consensus_11351#2      CAAATTTTACTTTGGTTTTCG--CTCTTGTTTGGATGGATCTTAATGTCGACTCATCACT 774
consensus_11351#3      TCGATCATGGGTGAAGATAAG--ACATGGAC---ATCGAGAC-AGTTTCGCCTCTGTACG 730
consensus_11351#0      CAAATTTTACTTTGGTTTTCG--CTCTTGTTTGGATGGATCTTAATGTCGACTCATCACT 3180
consensus_11351#1      TGTGTTGTGCCCACAGGCGGGTAAAAAGGGGGGGAAATGTGCTCATATCTTCCCCGCTTC 883
                           *  *            *       *     *          * **  * *      

consensus_11351#2      CATGCATCGCTCATCCTCCT--GGCCTTTGATATATATCCATGGGAACTACTAGAGAAAG 832
consensus_11351#3      AGAACATCACCGAAACATAGAAGAAGTTTGATACAAACCACTGGTA--TGTCAGACA--- 785
consensus_11351#0      CATGCATCGCTCATCCTCCT--GGCCTTTGATATATATCCATGGGAACTACTAGAGAAAG 3238
consensus_11351#1      CATGAAGGAAAGAACCACGCCCCTAATGTGCCTCATTAAGTTGGTAG-GAGCGGGGGGAG 942
                            *      *  *          * **    *      *** *       *      

consensus_11351#2      GCTTTGTAGTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAACATTT 892
consensus_11351#3      GTCCCGATGCCTCCCAAATCTACCACTGCAC----------------------------- 816
consensus_11351#0      GCTTTGTAGTCTCGCTTGGGAACCTCCTGACTACGAATCCGGGACTAAAGATGAAC---- 3294
consensus_11351#1      GGCGCGCCACCCCCCCTTTTCTTTTTTCCTTTTTNATTTTGNGTTGTGTTTTTTATGTCT 1002
                       *    *    * * *                                             

consensus_11351#2      ATTCTCAAATCCC----------------------- 905
consensus_11351#3      ------------------------------------
consensus_11351#0      ------------------------------------
consensus_11351#1      GTTNGGTGTGGCCCACGCCGCGGCCGCCCCCATTGT 1038


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)