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Oryza sativa
cluster # 11366 cluster # 11366       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11366#0 length = 1542 sequences # 7  
consensus_11366#1 length = 551 sequences # 1  

consensusID : consensus_11366#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1542
fasta sequence
                              [CTCCTAGTCACACTTGACAGTTCAGCTTCAGCTCCTCCCCCACCATCTCCCTCCTCGCCGCCGGCCCCCATTTCTCCCGCGTCCACTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCTATGGTCCCCTCGGGCTCGGGCGGTGGGCCGCCGGTGATTGCGGAGGTGGAGATGAACGGCGGCGCCGACTCGGGCGCCGCCACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTCTACGACACCCCGGCCACTCTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTATGGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATCCTCGTGGATCCACATTTGGCTTTGGGGCCAACATAAGCATTGGTAATCCAAAAGACAAGGGGAAGGAAGAATTCCGGAAGTATCATGCGGCGGCAATAGAAGTGCCTGGCCCAGAGGTGACACGCTTGGCTGCTATGGCTGGAAAATATAAAGTATTTTTAGTGATGGGAGTGATTGAAAGGGAAGGTTACACTCTGTATTGCTCGGTGCTCTTCTTTGATCCTCTAGGACGGTACCTAGGTAAGCACCGAAAGCTCATGCCAACAGCATTAGAACGAATAATATGGGGATTTGGAGATGGATCAACAATTCCTGTTTATGATACTCCACTTGGAAAGATCGGAGCCCTAATTTGCTGGGAAAATAAAATGCCACTGTTGCGGACAGCACTTTATGGTAAAGGTATTGAGATATATTGTGCTCCAACTGCTGATTCCAGACAAGTTTGGCAAGCCTCCATGACTCATATTGCCTTAGAGGGGGGATGCTTTGTCCTGTCAGCAAATCAATTCTGCCGTAGAAAGGACTATCCTCCACCACCGGAGTATGTATTTTCTGGTTTAGGTGAAGAGCCTTCTCCAGACACTGTTGTCTGCCCTGGAGGTAGCGTCATCATTTCACCATCCGGAGAAGTCTTGGCAGGTCCCAACTACGAAGGGGAGGCGCTGATTACAGCTGATCTAGACCTTGGAGAAATCGTGCGAGCCAAGTTTGATTTTGATGTGGTGGGCCACTATGCTCGACCTGAGGTCTTGAGCTTGGTAGTGAATGACCAGCCGCACCTCCCTGTGTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCATTGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAGAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGGTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTACGATGGTTTCACTGTCACACATGTGGTTATTTTACGTTCTACTCCCTTGGTGCCATATTACAGATTATTTTAGTTTTATCATAAGTTAANNTTNTNTAAAAA]

[+] EMBL AK069985             [CTCCTAGTCACACTTGACAGTTCAGCTTCAGCTCCTCCCCCACCATCTCCCTCCTCGCCGCCGGCCCCCATTTCTCCCGCGTCCACTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCTATGGTCCCCTCGGGCTCGGGCGGTGGGCCGCCGGTGATTGCGGAGGTGGAGATGAACGGCGGCGCCGACTCGGGCGCCGCCACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTCTACGACACCCCGGCCACTCTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTATGGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATCCTCGTGGATCCACATTTGGCTTTGGGGCCAACATAAGCATTGGTAATCCAAAAGACAAGGGGAAGGAAGAATTCCGGAAGTATCATGCGGCGGCAATAGAAGTGCCTGGCCCAGAGGTGACACGCTTGGCTGCTATGGCTGGAAAATATAAAGTATTTTTAGTGATGGGAGTGATTGAAAGGGAAGGTTACACTCTGTATTGCTCGGTGCTCTTCTTTGATCCTCTAGGACGGTACCTAGGTAAGCACCGAAAGCTCATGCCAACAGCATTAGAACGAATAATATGGGGATTTGGAGATGGATCAACAATTCCTGTTTATGATACTCCACTTGGAAAGATCGGAGCCCTAATTTGCTGGGAAAATAAAATGCCACTGTTGCGGACAGCACTTTATGGTAAAGGTATTGAGATATATTGTGCTCCAACTGCTGATTCCAGACAAGTTTGGCAAGCCTCCATGACTCATATTGCCTTAGAGGGGGGATGCTTTGTCCTGTCAGCAAATCAATTCTGCCGTAGAAAGGACTATCCTCCACCACCGGAGTATGTATTTTCTGGTTTAGGTGAAGAGCCTTCTCCAGACACTGTTGTCTGCCCTGGAGGTAGCGTCATCATTTCACCATCCGGAGAAGTCTTGGCAGGTCCCAACTACGAAGGGGAGGCGCTGATTACAGCTGATCTAGACCTTAGAGAAATCGTGCGAGCCAAGTTTGATTTTGATGTGGTGGGCCACTATGCTCGACCTGAGGTCTTGAGCTTGGTAGTGAATGACCAGCCGCACCTCCCTGTGTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCATTGGCTCCGATCGTTCATGCTTGACGTGCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAGAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGGTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTACGATGGTTTCACTGTCACACATGTGGTTAT                                                                        ]
[+] EMBL AK121244             [                 CAGTTCAGCTTCAGCTCCTCCCCCACCATCTCCCTCCTCGCCGCCGGCCCCCATTTCTCCCGCGTCCACTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCTATGGTCCCCTCGGGCTCGGGCGGTGGGCCGCCGGTGATTGCGGAGGTGGAGATGAACGGCGGCGCCGACTCGGGCGCCGCCACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTCTACGACACCCCGGCCACTCTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTATGGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATCCTCGTGGATCCACATTTGGCTTTGGGGCCAACATAAGCATTGGTAATCCAAAAGACAAGGGGAAGGAAGAATTCCGGAAGTATCATGCGGCGGCAATAGAAGTGCCTGGCCCAGAGGTGACACGCTTGGCTGCTATGGCTGGAAAATATAAAGTATTTTTAGTGATGGGAGTGATTGAAAGGGAAGGTTACACTCTGTATTGCTCGGTGCTCTTCTTTGATCCTCTAGGACGGTACCTAGGTAAGCACCGAAAGCTCATGCCAACAGCATTAGAACGAATAATATGGGGATTTGGAGATGGATCAACAATTCCTGTTTATGATACTCCACTTGGAAAGATCGGAGCCCTAATTTGCTGGGAAAATAAAATGCCACTGTTGCGGACAGCACTTTATGGTAAAGGTATTGAGATATATTGTGCTCCAACTGCTGATTCCAGACAAGTTTGGCAAGCCTCCATGACTCATATTGCCTTAGAGGGGGGATGCTTTGTCCTGTCAGCAAATCAATTCTGCCGTAGAAAGGACTATCCTCCACCACCGGAGTATGTATTTTCTGGTTTAGGTGAAGAGCCTTCTCCAGACACTGTTGTCTGCCCTGGAGGTAGCGTCATCATTTCACCATCCGGAGAAGTCTTGGCAGGTCCCAACTACGAAGGGGAGGCGCTGATTACAGCTGATCTAGACCTTGGAGAAATCGTGCGAGCCAAGTTTGATTTTGATGTGGTGGGCCACTATGCTCGACCTGAGGTCTTGAGCTTGGTAGTGAATGACCAGCCGCACCTCCCTGTGTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGCGAATCATTGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAGAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGGTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTACGATGG                                                                                                ]
[+] EMBL OS0424A              [                               CTCCNNCCCCACCATCTCCCTCCTCGCCGCCGGCCCCCATTTCTCCCGCGTCCACTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCTATGGTCCCCTCGGGCTCGGGCGGTGGGCCG CGGTGATTGCGGAGGTGGAGATGAACGGCGGCGCNAGCTCGGGCG CNCAACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTCTACGACANCCCGGCCANTNTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTATGGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATACTCGTGGATCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OS0997A              [                               CTCCNCCCCCACCATCTCCCTCCTCGCCGCCGGCCCCCATTTCTCCCGCGTCCACTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCTATGGTCCCCTCGGGCTCGGGCGGTGGGCCG CGGTGATTGCGGAGGTGGAGATGAACGGCGGCGCCATCTCGGGCG CGCAGCGGTCAGGGCCACCGTCGTGCAGGCCTCCACNGTGTTCTACGACACCCCGNCCACTCTAGATAAAGCAGAGAGGTTGATAGAGNAGGCTNCTGGGTATGGTTCACAGTTGGTTGTGTT CNAGAAGCTTTTGTTGGCGGCTATCCTNGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK104033             [                                TCCTCCCCCACCATCTCCCTCCTCGCCGCCGGCCCCCATTTCTCCCGCGTCCGCTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCTATGGTCCCCTCGGGCTCGGGCGGTGGGCCGCCGGTGATTGCGGAGGTGGAGATGAACGGCGGCGCCGACTCGGGCGCCGCCACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTCTACGACACCCCGGCCACTCTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTATGGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATCCTCGTGGATCCACATTTGGCTTTGGGGCCAACATAAGCATTGGTAATCCAAAAGACAAGGGGAAGGAAGAATTCCGGAAGTATCATGCGGCGGCAATAGAAGTGCCTGGCCCAGAGGTGACACGCTTGGCTGCTATGGCTGGAAAATATAAAGTATTTTTAGTGATGGGAGTGATTGAAAGGGAAGGTTACACTCTGTATTGCTCGGTGCTCTTCTTTGATCCTCTAGGACGGTACCTAGGTAAGCACCGAAAGCTCATGCCAACAGCATTAGAACGAATAATATGGGGATTTGGAGATGGATCAACAATTCCTGTTTATGATACTCCACTTGGAAAGATCGGAGCCCTAATTTGCTGGGAAAATAAAATGCCACTGTTGCGGACAGCACTTTATGGTAAAGGTATTGAGATATATTGTGCTCCAACTGCTGATTCCAGACAAGTTTGGCAAGCCTCCATGACTCATATTGCCTTAGAGGGGGGATGCTTTGTCCTGTCAGCAAATCAATTCTGCCGTAGAAAGGACTATCCTCCACCACCGGAGTATGTATTTTCTGGTTTAGGTGAAGAGCCTTCTCCAGACACTGTTGTCTGCCCTGGAGGTAGCGTCATCATTTCACCATCCGGAGAAGTCTTGGCAGGTCCCAACTACGAAGGGGAGGCGCTGATTACAGCTGATCTAGACCTTGGAGAAATCGTGCGAGCCAAGTTTGACTTTGATGTGGTGGGCCACTATGCTCGACCTGAGGTCTTGAGCTTGGTAGTGAATGACCAGCCGCACCTCCCTGTGTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCATTGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAGAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGGTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTACGATGG                                                                                                ]
[+] EMBL AB027054             [                                                                                                                           GTCCCCTCGGGCTCGGGCGGTGGGCCGCCGGTGATTGCGGAGGTGGAGATGAACGGCGGCGCCACCTCGGGCGCCGCAACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTCTACGACACCCCGGCCACTCTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTATGGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATCCTCGTGGATCCACATTTGGCTTTGGGGCCAACATAAGCATTGGTAATCCAAAAGACAAGGGGAAGGAAGAATTCCGGAAGTATCATGCGGCGGCAATAGAAGTGCCTGGCCCAGAGGTGACACGCTTGGCTGCTATGGCTGGAAAATATAAAGTATTTTTAGTGATGGGAGTGATTGAAAGGGAAGGTTACACTCTGTATTGCTCGGTGCTCTTCTTTGATCCTCTAGGACGGTACCTAGGTAAGCACCGAAAGCTCATGCCAACAGCATTAGAACGAATAATATGGGGATTTGGAGATGGATCAACAATTCCTGTTTATGATACTCCACTTGGAAAGATCGGAGCCCTAATTTGCTGGGAAAATAAAATGCCACTGTTGCGGACAGCACTTTATGGTAAAGGTATTGAGATATATTGTGCTCCAACTGCTGATTCCAGACAAGTTTGGCAAGCCTCCATGACTCATATTGCCTTAGAGGGGGGATGCTTTGTCCTGTCAGCAAATCAATTCTGCCGTAGAAAGGACTATCCTCCACCACCGGAGTATGTATTTACTGGTTTAGGTGAAGAGCCTTCTCCAGACACTGTTGTCTGCCCTGGAGGTAGCGTCATCATTTCACCATCCGGAGAAGTCTTGGCAGGTCCCAACTACGAAGGGGAGGCGCTGATTACAGCTGATCTAGACCTTGGAGAAATCGTGCGAGCCAAGTTTGATTTTGATGTGGTGGGCCACTATGCTCGACCTGAGGTCTTGAGCTTGGTAGTGAATGACCAGCCGCACCTCCCTGTGTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAA                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C98035               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                nTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAGTCAANCGNAAAACTGATTACTGTCACTAGACGGTGAATCATTGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCNGTCCAGAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTNGGTGTCNGATCAAACTTGGTTCCCCTCCNTATCAAATATGAGTAGTGCATGAACTGGCACTACGATGGTTTCACTGTCACACATGTGGTTATTTTACGTTCTACTCCCTTGGTGCCATATTACAGATTATTTTAGTTTTATCATAAGTTAANNTTNTNTAAAAA]


>consensus_11366#0 CTCCTAGTCACACTTGACAGTTCAGCTTCAGCTCCTCCCCCACCATCTCCCTCCTCGCCG CCGGCCCCCATTTCTCCCGCGTCCACTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCT ATGGTCCCCTCGGGCTCGGGCGGTGGGCCGCCGGTGATTGCGGAGGTGGAGATGAACGGC GGCGCCGACTCGGGCGCCGCCACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTC TACGACACCCCGGCCACTCTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTAT GGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATCCTCGTGGATCCACA TTTGGCTTTGGGGCCAACATAAGCATTGGTAATCCAAAAGACAAGGGGAAGGAAGAATTC CGGAAGTATCATGCGGCGGCAATAGAAGTGCCTGGCCCAGAGGTGACACGCTTGGCTGCT ATGGCTGGAAAATATAAAGTATTTTTAGTGATGGGAGTGATTGAAAGGGAAGGTTACACT CTGTATTGCTCGGTGCTCTTCTTTGATCCTCTAGGACGGTACCTAGGTAAGCACCGAAAG CTCATGCCAACAGCATTAGAACGAATAATATGGGGATTTGGAGATGGATCAACAATTCCT GTTTATGATACTCCACTTGGAAAGATCGGAGCCCTAATTTGCTGGGAAAATAAAATGCCA CTGTTGCGGACAGCACTTTATGGTAAAGGTATTGAGATATATTGTGCTCCAACTGCTGAT TCCAGACAAGTTTGGCAAGCCTCCATGACTCATATTGCCTTAGAGGGGGGATGCTTTGTC CTGTCAGCAAATCAATTCTGCCGTAGAAAGGACTATCCTCCACCACCGGAGTATGTATTT TCTGGTTTAGGTGAAGAGCCTTCTCCAGACACTGTTGTCTGCCCTGGAGGTAGCGTCATC ATTTCACCATCCGGAGAAGTCTTGGCAGGTCCCAACTACGAAGGGGAGGCGCTGATTACA GCTGATCTAGACCTTGGAGAAATCGTGCGAGCCAAGTTTGATTTTGATGTGGTGGGCCAC TATGCTCGACCTGAGGTCTTGAGCTTGGTAGTGAATGACCAGCCGCACCTCCCTGTGTCT TTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTAC TAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCATT GGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAG AACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGG TGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTA CGATGGTTTCACTGTCACACATGTGGTTATTTTACGTTCTACTCCCTTGGTGCCATATTA CAGATTATTTTAGTTTTATCATAAGTTAANNTTNTNTAAAAA



consensusID : consensus_11366#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 551
fasta sequence
                              [TTTTTGGTTNNGGGAGNCCTTTTCCAANATGTTTTCCCCGGGNGGNGTTTNTATTCACCATCCGGGNGANTTTGGCGGTCCNAATAGGAAGGGNGGGGNGATAAAAGTAATTTAGCCTTGGAGAATTCTGNGACCNAAGTTNGATTTTGATGTGGGGGCNATATGNTCGACCTGAGTTNTTGAGCTTGGTAGNGAATGACCAGCCGCACNTCCCCTGTGTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCATTGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAGAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGGTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTACGATGGTTTCACTGTCAAAAAAAAAAAAA]

[+] EMBL AA753846             [TTTTTGGTTNNGGGAGNCCTTTTCCAANATGTTTTCCCCGGGNGGNGTTTNTATTCACCATCCGGGNGANTTTGGCGGTCCNAATAGGAAGGGNGGGGNGATAAAAGTAATTTAGCCTTGGAGAATTCTGNGACCNAAGTTNGATTTTGATGTGGGGGCNATATGNTCGACCTGAGTTNTTGAGCTTGGTAGNGAATGACCAGCCGCACNTCCCCTGTGTCTTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCATTGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAGAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGGTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTACGATGGTTTCACTGTCAAAAAAAAAAAAA]


>consensus_11366#1 TTTTTGGTTNNGGGAGNCCTTTTCCAANATGTTTTCCCCGGGNGGNGTTTNTATTCACCA TCCGGGNGANTTTGGCGGTCCNAATAGGAAGGGNGGGGNGATAAAAGTAATTTAGCCTTG GAGAATTCTGNGACCNAAGTTNGATTTTGATGTGGGGGCNATATGNTCGACCTGAGTTNT TGAGCTTGGTAGNGAATGACCAGCCGCACNTCCCCTGTGTCTTTCACTTCTGCCGCTGAG AAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTACTAAGCAAGATAATCAGAG TCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCATTGGCTCCGATCGTTCATGC TTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCAGAACAAACTTCTGAGGTCT GTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAGGTGTCAGATCAAACTTGGT TCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACTACGATGGTTTCACTGTCAA AAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11366#0      CTCCTAGTCACACTTGACAGTTCAGCTTCAGCTCCTCCCCCACCATCTCCCTCCTCGCCG 60
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      CCGGCCCCCATTTCTCCCGCGTCCACTTCGAGCGGCGGCGCGCGTGCCGTACCGATGGCT 120
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      ATGGTCCCCTCGGGCTCGGGCGGTGGGCCGCCGGTGATTGCGGAGGTGGAGATGAACGGC 180
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      GGCGCCGACTCGGGCGCCGCCACGGTCAGGGCCACCGTCGTGCAGGCCTCCACCGTGTTC 240
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      TACGACACCCCGGCCACTCTAGATAAAGCAGAGAGGTTGATAGAGGAGGCTGCTGGGTAT 300
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      GGTTCACAGTTGGTTGTGTTCCCAGAAGCTTTTGTTGGCGGCTATCCTCGTGGATCCACA 360
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      TTTGGCTTTGGGGCCAACATAAGCATTGGTAATCCAAAAGACAAGGGGAAGGAAGAATTC 420
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      CGGAAGTATCATGCGGCGGCAATAGAAGTGCCTGGCCCAGAGGTGACACGCTTGGCTGCT 480
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      ATGGCTGGAAAATATAAAGTATTTTTAGTGATGGGAGTGATTGAAAGGGAAGGTTACACT 540
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      CTGTATTGCTCGGTGCTCTTCTTTGATCCTCTAGGACGGTACCTAGGTAAGCACCGAAAG 600
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      CTCATGCCAACAGCATTAGAACGAATAATATGGGGATTTGGAGATGGATCAACAATTCCT 660
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      GTTTATGATACTCCACTTGGAAAGATCGGAGCCCTAATTTGCTGGGAAAATAAAATGCCA 720
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      CTGTTGCGGACAGCACTTTATGGTAAAGGTATTGAGATATATTGTGCTCCAACTGCTGAT 780
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      TCCAGACAAGTTTGGCAAGCCTCCATGACTCATATTGCCTTAGAGGGGGGATGCTTTGTC 840
consensus_11366#1      ------------------------------------------------------------
                                                                                   

consensus_11366#0      CTGTCAGCAAATCAATTCTGCCGTAGAAAGGACTATCCTCCACCACCGGAGTATGTATTT 900
consensus_11366#1      ----------------------------------------------------------TT 2
                                                                                 **

consensus_11366#0      TCTGGTTTAGGTGAAGAGCCTTCTCCAGACACTGTTGTCTGCCCTGGAGGTAGCGTCATC 960
consensus_11366#1      TTTGGTTNNGG----GAGNCCTTTTCCAANA----TGTTTTCCCCG--GGNGGNGTTTNT 52
                       * *****  **    *** * * * *  * *    *** * *** *  **  * **    

consensus_11366#0      ATTTCACCATCCGGAGAAGTCTTGGCAGGTCCCAACTACGAAGGGGAGGCGCTGATTACA 1020
consensus_11366#1      ATT-CACCATCCGGGNGANT-TTGGC-GGTCCNAATAGGAAGGGNGGGGNGATAA----A 105
                       *** **********   * * ***** ***** **     * ** * ** * * *    *

consensus_11366#0      GCTGATCTAGACCTTGGAGAAATCGTGCGAGCCAAGTTTGATTTTGATGTGGTGGGCCAC 1080
consensus_11366#1      AGTAATTTAG-CCTTGGAGAATTC-TGNGACCNAAGTTNGATTTTGATGTGG-GGGCNA- 161
                         * ** *** ********** ** ** ** * ***** ************* **** * 

consensus_11366#0      TATGCTCGACCTGAGGTCTTGAGCTTGGTAGTGAATGACCAGCCGCACCTCCC-TGTGTC 1139
consensus_11366#1      TATGNTCGACCTGAGTTNTTGAGCTTGGTAGNGAATGACCAGCCGCACNTCCCCTGTGTC 221
                       **** ********** * ************* **************** **** ******

consensus_11366#0      TTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTA 1199
consensus_11366#1      TTTCACTTCTGCCGCTGAGAAGACGACAGCCGCAAAAAGTGACAGCACTGCAAAGCCCTA 281
                       ************************************************************

consensus_11366#0      CTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCAT 1259
consensus_11366#1      CTAAGCAAGATAATCAGAGTCAATCGCAAAACTGATTACTGTCACTAGACGGTGAATCAT 341
                       ************************************************************

consensus_11366#0      TGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCA 1319
consensus_11366#1      TGGCTCCGATCGTTCATGCTTGACGTCCCTGTCATCCCCTTGCTTGTAAATTGCAGTCCA 401
                       ************************************************************

consensus_11366#0      GAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAG 1379
consensus_11366#1      GAACAAACTTCTGAGGTCTGTAGAACTTGCCCCTTTTATGCTGTGTATCTATCAAGGTAG 461
                       ************************************************************

consensus_11366#0      GTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACT 1439
consensus_11366#1      GTGTCAGATCAAACTTGGTTCCCCTCCATATCAAATATGAGTAGTGCATGAACTGGCACT 521
                       ************************************************************

consensus_11366#0      ACGATGGTTTCACTGTCACACATGTGGTTATTTTACGTTCTACTCCCTTGGTGCCATATT 1499
consensus_11366#1      ACGATGGTTTCACTGTCAAAAAAAAAAAAA------------------------------ 551
                       ****************** * *       *                              

consensus_11366#0      ACAGATTATTTTAGTTTTATCATAAGTTAANNTTNTNTAAAAA 1542
consensus_11366#1      -------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)