cluster # 11379

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Oryza sativa
cluster # 11379 cluster # 11379 Sequences # 8 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11379#0 length = 2840 sequences # 4
consensus_11379#1 length = 688 sequences # 1

consensus_11379#2 length = 670 sequences # 1
consensus_11379#3 length = 669 sequences # 1
consensus_11379#4 length = 627 sequences # 1

consensusID : consensus_11379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2840
fasta sequence

                              [TTTTCCTCGGGCAAGAACTGCTTTGTCCACTCCGCTGCCATTTGTGCTGCTCCCTCCTCCTCTCCTCCTCGCTGGATTCGTGGCGACCAGGCCGAGAAAAAGAAGCAGAGATAGAGAGAGATAGAAGAGAGAGAGAGAATCAAAGCAAAGCAGCCATAGTGAGAGAGAGAAGAGGAGAAAAGAGAGGGATAAAAGGAGCTTGAGCTCACAAACAACAAGCCTCTCTCCTTCTCCTCCTTCTTCTTCTTCTCAACGATGTCCTAGCTAGGAATAGCTTCTCTTGTTTGTAGCAGTAGGCTGCTACGCGAGCCAATCGCCCAATCTGAGCTCCCTAAGGTTGGCAGTGGGCTGCATTGGCGGCAGAGAGAGAGAGAGAGAGAGATCCCTTGGTTGGACTCCCACCGTCGAAAACCCAATCTTGGGTGGCAACTGATTTGGCTGGTTCTTTTTGTTCCAAGATTTGTGGTCAGCGGATCAAAAAAATCCTTCCACTTTTTTTGAGGCGATTTGGTTCCGGATTTGAAGGTTTCTTGCCGCGAAGATCGCGGGTTGGTACTGTTTTGCCTGGTAGATCCCTTTCGTTTGGCTGCAGAGGAGGAGCTATGAGACAATGAGAGAAGAGAGCGCCAAGAAGAGCAAGCTTTCATGGTCCAAATCGCTCGTGAGGAAGTGGTTCAACATCAGGACCAAGGCACAGGACTTCCATGCTGATTCTGAAACCACAACCCAAGGTAGGGATGGTGGTGGTGGAGCAGGGGGGAGGGCCAGCTTCTCAGCGAGCTCTGCAAGCACAAGTTCAGCCAAGAAAAGCAGAACAGACCGGTCGTCGTCGAAGCGGAGCGCTGATCGCGTCCGCCGAGGGAGGAATGATTTCGATCTAGCACGCCTGACAGAGGTTCAAGATTACAGAATCTTTGCCGCAACATGGAATGTCGGAGGCAAGTCCCCACCAAGGGGGCTAAATTTAGATGAGTGGCTTCACTCTTCTCCTCCTGCTGATATCTACGTGTTAGGATTTCAGGAGATTGTCCCTTTGAATGCTGGAAATGTTCTTGGCACTGAAGATAATATTCCAGCAAAGAAGTGGGTATCTCTTATTAGGAGGACCCTGAACAAGAATCCTGGGGCCAGTGGTTCTGGTGTCTATCATACGCCGTCACCAGTCCTTAATCCAGTCGTAGAACTAGAAGCTGATTTTGAGGCATCTGCAAGAAGGCAGGAGAACTACTCTTTCTTTCACCGTCGATCATTCCATAATCTCAGCCGCAGTTTAAGAATGGATGCAGACTACATGTTCCCACAACCAAAGTTGGACAGAAGATTTAGCGTTTGTGACCCAGTCAGCTTAGGAGGTAGACCAAGTGACTTTGATGGTAATTTGCGGTGGCTTGGGTCACCAGATGAGGAGAACATCGATGAGGAACTCTCTAACGCTGCACAATGTTCTCCACTTCCTTATAGCTGCAATACAACGGCACCTACTGAAGCTAACGACGAGCAACCCAATGGATCAAGGTATTGTTTGGTTGCCAGCAAACAAATGGTTGGCATATTTCTCACTGTCTGGGTGCGCAATGAAATAAGAGATGATGTGAGAAACTTGAAAGTTTCTTGTGTGGGTAGAGGATTGATGGGTTATCTTGGAAATAAGGGTTCTATATCAATAAGCATGTCTTTGCACCAGACAAGCTTCTGCTTCATTTGTTGCCATTTGACCTCAGGGGAAAAGGAAGGGGATGAATTGCGCAGGAATTCTGATGTTATGGAAATATTAAGAAAGACAAGGTTTCCACGGGTTCGTGGTGCTAATGATGTCAAATCACCTGAAACGATTCTTGAGCATGACCGTATAATATGGCTTGGGGATTTGAACTATCGTATTGCCCTCTCCTATTGTTCAGCAAGAGCTCTTGTCGAAATGCATAACTGGAAACAATTATTAGAAAAAGATCAGCTTCGAATACAACAAAGATACGGGAGAGTTTTTCAGGGCTGGAAAGAAGGAAGGATTTATTTTCCTCCCACGTACAAGTATTCGTTCAATTCAGATCGTTATGCCGGAGAGGGCATGCATCCCAAAGAAAAAAGAAGAACGCCTGCATGGTGTGATCGCATTCTCTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGGGGAGTCTCGCTTCTCCGATCACAGGCCAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGG-ATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTT-----TTTTTCTTTTTATCTGCTTAGAGTATCAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTTACAATCATGTGTATAACCTTTTTATTTTGGTGCCTGAACAGTCAAGTAAGGCATGCATTAGTACTACTCAT]

[+] EMBL AK067194             [TTTTCCTCGGGCAAGAACTGCTTTGTCCACTCCGCTGCCATTTGTGCTGCTCCCTCCTCCTCTCCTCCTCGCTGGATTCGTGGCGACCAGGCCGAGAAAAAGAAGCAGAGATAGAGAGAGATAGAAGAGAGAGAGAGAATCAAAGCAAAGCAGCCATAGTGAGAGAGAGAAGAGGAGAAAAGAGAGGGATAAAAGGAGCTTGAGCTCACAAACAACAAGCCTCTCTCCTTCTCCTCCTTCTTCTTCTTCTCAACGATGTCCTAGCTAGGAATAGCTTCTCTTGTTTGTAGCAGTAGGCTGCTACGCGAGCCAATCGCCCAATCTGAGCTCCCTAAGGTTGGCAGTGGGCTGCATTGGCGGCAGAGAGAGAGAGAGAGAGAGATCCCTTGGTTGGACTCCCACCGTCGAAAACCCAATCTTGGGTGGCAACTGATTTGGCTGGTTCTTTTTGTTCCAAGATTTGTGGTCAGCGGATCAAAAAAATCCTTCCACTTTTTTTGAGGCGATTTGGTTCCGGATTTGAAGGTTTCTTGCCGCGAAGATCGCGGGTTGGTACTGTTTTGCCTGGTAGATCCCTTTCGTTTGGCTGCAGAGGAGGAGCTATGAGACAATGAGAGAAGAGAGCGCCAAGAAGAGCAAGCTTTCATGGTCCAAATCGCTCGTGAGGAAGTGGTTCAACATCAGGACCAAGGCACAGGACTTCCATGCTGATTCTGAAACCACAACCCAAGGTAGGGATGGTGGTGGTGGAGCAGGGGGGAGGGCCAGCTTCTCAGCGAGCTCTGCAAGCACAAGTTCAGCCAAGAAAAGCAGAACAGACCGGTCGTCGTCGAAGCGGAGCGCTGATCGCGTCCGCCGAGGGAGGAATGATTTCGATCTAGCACGCCTGACAGAGGTTCAAGATTACAGAATCTTTGCCGCAACATGGAATGTCGGAGGCAAGTCCCCACCAAGGGGGCTAAATTTAGATGAGTGGCTTCACTCTTCTCCTCCTGCTGATATCTACGTGTTAGGATTTCAGGAGATTGTCCCTTTGAATGCTGGAAATGTTCTTGGCACTGAAGATAATATTCCAGCAAAGAAGTGGGTATCTCTTATTAGGAGGACCCTGAACAAGAATCCTGGGGCCAGTGGTTCTGGTGTCTATCATACGCCGTCACCAGTCCTTAATCCAGTCGTAGAACTAGAAGCTGATTTTGAGGCATCTGCAAGAAGGCAGGAGAACTACTCTTTCTTTCACCGTCGATCATTCCATAATCTCAGCCGCAGTTTAAGAATGGATGCAGACTACATGTTCCCACAACCAAAGTTGGACAGAAGATTTAGCGTTTGTGACCCAGTCAGCTTAGGAGGTAGACCAAGTGACTTTGATGGTAATTTGCGGTGGCTTGGGTCACCAGATGAGGAGAACATCGATGAGGAACTCTCTAACGCTGCACAATGTTCTCCACTTCCTTATAGCTGCAATACAACGGCACCTACTGAAGCTAACGACGAGCAACCCAATGGATCAAGGTATTGTTTGGTTGCCAGCAAACAAATGGTTGGCATATTTCTCACTGTCTGGGTGCGCAATGAAATAAGAGATGATGTGAGAAACTTGAAAGTTTCTTGTGTGGGTAGAGGATTGATGGGTTATCTTGGAAATAAGGGTTCTATATCAATAAGCATGTCTTTGCACCAGACAAGCTTCTGCTTCATTTGTTGCCATTTGACCTCAGGGGAAAAGGAAGGGGATGAATTGCGCAGGAATTCTGATGTTATGGAAATATTAAGAAAGACAAGGTTTCCACGGGTTCGTGGTGCTAATGATGTCAAATCACCTGAAACGATTCTTGAGCATGACCGTATAATATGGCTTGGGGATTTGAACTATCGTATTGCCCTCTCCTATTGTTCAGCAAGAGCTCTTGTCGAAATGCATAACTGGAAACAATTATTAGAAAAAGATCAGCTTCGAATACAACAAAGATACGGGAGAGTTTTTCAGGGCTGGAAAGAAGGAAGGATTTATTTTCCTCCCACGTACAAGTATTCGTTCAATTCAGATCGTTATGCCGGAGAGGGCATGCATCCCAAAGAAAAAAGAAGAACGCCTGCATGGTGTGATCGCATTCTCTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGGGGAGTCTCGCTTCTCCGATCACAGGCCAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGG ATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTTTTTTCTTTTTCTTTTTATCTGCTTAGAGTATTAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTTACAATCATGTGTATAACCTTTTTATTTTGGTGCCTGAACAGTCAAGTAAGGCATG                ]
[+] EMBL CB663577             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGATGTTATGGAAATATTAAGAAAGACAAGGTTTCCACGGGTTCGTGGTGCTAATGATGTCAAATCACCTGAAACGATTCTTGAGCATGACCGTATAATATGGCTTGGGGATTTGAACTATCGTATTGCCCTCTCCTATTGTTCAGCAAGAGCTCTTGTCGAAATGCATAACTGGAAACAATTATTAGAAAAAGATCAGCTTCGAATACAACAAAGATACGGGAGAGTTTTTCAGGGCTGGAAAGAAGGAAGGATTTATTTTCCTCCCACGTACAAGTATTCGTTCAATTCAGATCGTTATGCCGGAGAGGGCATGCATCCCAAAGAAAAAAGAAGAACGCCTGCATGGTGTGATCGCATTCTCTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGGGGAGTCTCGCTTCTCCGATCACAGGCCAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGTACAATTCTCAATTTTGCAGa                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA764077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGG ATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTT     TTTTTCTTTTTATCTGCTTAGAGTATCAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTTACAATCATGTGTATAACCTTTTTATTTTGGTGCCTGAACAGTCAAGTAAGGCATGCATTAGTACTACTCA ]
[+] EMBL CB096611             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGG ATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCC TTTT     TTTTTCTTTTTATCTGCTTAGAGTATCAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTTACAATCATGTGTATAACCTTTTTATTTTGGTGCCTGAACAGTCAAGTAAGGCATGCATTAGTACTACTCAT]




>consensus_11379#0
TTTTCCTCGGGCAAGAACTGCTTTGTCCACTCCGCTGCCATTTGTGCTGCTCCCTCCTCC
TCTCCTCCTCGCTGGATTCGTGGCGACCAGGCCGAGAAAAAGAAGCAGAGATAGAGAGAG
ATAGAAGAGAGAGAGAGAATCAAAGCAAAGCAGCCATAGTGAGAGAGAGAAGAGGAGAAA
AGAGAGGGATAAAAGGAGCTTGAGCTCACAAACAACAAGCCTCTCTCCTTCTCCTCCTTC
TTCTTCTTCTCAACGATGTCCTAGCTAGGAATAGCTTCTCTTGTTTGTAGCAGTAGGCTG
CTACGCGAGCCAATCGCCCAATCTGAGCTCCCTAAGGTTGGCAGTGGGCTGCATTGGCGG
CAGAGAGAGAGAGAGAGAGAGATCCCTTGGTTGGACTCCCACCGTCGAAAACCCAATCTT
GGGTGGCAACTGATTTGGCTGGTTCTTTTTGTTCCAAGATTTGTGGTCAGCGGATCAAAA
AAATCCTTCCACTTTTTTTGAGGCGATTTGGTTCCGGATTTGAAGGTTTCTTGCCGCGAA
GATCGCGGGTTGGTACTGTTTTGCCTGGTAGATCCCTTTCGTTTGGCTGCAGAGGAGGAG
CTATGAGACAATGAGAGAAGAGAGCGCCAAGAAGAGCAAGCTTTCATGGTCCAAATCGCT
CGTGAGGAAGTGGTTCAACATCAGGACCAAGGCACAGGACTTCCATGCTGATTCTGAAAC
CACAACCCAAGGTAGGGATGGTGGTGGTGGAGCAGGGGGGAGGGCCAGCTTCTCAGCGAG
CTCTGCAAGCACAAGTTCAGCCAAGAAAAGCAGAACAGACCGGTCGTCGTCGAAGCGGAG
CGCTGATCGCGTCCGCCGAGGGAGGAATGATTTCGATCTAGCACGCCTGACAGAGGTTCA
AGATTACAGAATCTTTGCCGCAACATGGAATGTCGGAGGCAAGTCCCCACCAAGGGGGCT
AAATTTAGATGAGTGGCTTCACTCTTCTCCTCCTGCTGATATCTACGTGTTAGGATTTCA
GGAGATTGTCCCTTTGAATGCTGGAAATGTTCTTGGCACTGAAGATAATATTCCAGCAAA
GAAGTGGGTATCTCTTATTAGGAGGACCCTGAACAAGAATCCTGGGGCCAGTGGTTCTGG
TGTCTATCATACGCCGTCACCAGTCCTTAATCCAGTCGTAGAACTAGAAGCTGATTTTGA
GGCATCTGCAAGAAGGCAGGAGAACTACTCTTTCTTTCACCGTCGATCATTCCATAATCT
CAGCCGCAGTTTAAGAATGGATGCAGACTACATGTTCCCACAACCAAAGTTGGACAGAAG
ATTTAGCGTTTGTGACCCAGTCAGCTTAGGAGGTAGACCAAGTGACTTTGATGGTAATTT
GCGGTGGCTTGGGTCACCAGATGAGGAGAACATCGATGAGGAACTCTCTAACGCTGCACA
ATGTTCTCCACTTCCTTATAGCTGCAATACAACGGCACCTACTGAAGCTAACGACGAGCA
ACCCAATGGATCAAGGTATTGTTTGGTTGCCAGCAAACAAATGGTTGGCATATTTCTCAC
TGTCTGGGTGCGCAATGAAATAAGAGATGATGTGAGAAACTTGAAAGTTTCTTGTGTGGG
TAGAGGATTGATGGGTTATCTTGGAAATAAGGGTTCTATATCAATAAGCATGTCTTTGCA
CCAGACAAGCTTCTGCTTCATTTGTTGCCATTTGACCTCAGGGGAAAAGGAAGGGGATGA
ATTGCGCAGGAATTCTGATGTTATGGAAATATTAAGAAAGACAAGGTTTCCACGGGTTCG
TGGTGCTAATGATGTCAAATCACCTGAAACGATTCTTGAGCATGACCGTATAATATGGCT
TGGGGATTTGAACTATCGTATTGCCCTCTCCTATTGTTCAGCAAGAGCTCTTGTCGAAAT
GCATAACTGGAAACAATTATTAGAAAAAGATCAGCTTCGAATACAACAAAGATACGGGAG
AGTTTTTCAGGGCTGGAAAGAAGGAAGGATTTATTTTCCTCCCACGTACAAGTATTCGTT
CAATTCAGATCGTTATGCCGGAGAGGGCATGCATCCCAAAGAAAAAAGAAGAACGCCTGC
ATGGTGTGATCGCATTCTCTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGG
GGAGTCTCGCTTCTCCGATCACAGGCCAGTGTACAGCATTTTCATGGCAGAAGTTGAGAT
TGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCT
ACTACCCCATTCTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACAT
GTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCAT
TAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGATATTGGGCAA
TTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACAC
TCACTCCAACTTTAGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTTTTTTTCT
TTTTATCTGCTTAGAGTATCAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAG
CTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATAC
TTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCT
TGCACAGTTACAATCATGTGTATAACCTTTTTATTTTGGTGCCTGAACAGTCAAGTAAGG
CATGCATTAGTACTACTCAT

consensusID : consensus_11379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence

                              [TTTTTTGGAGCAACAAAGTACAACATAGATAGATTATACCTTTATTAGGAGGTCACATCTTCAGAGTAACTCCAAGAGAGTGTACCGACACACAAAGAAGAAGCAGCGGAAATCTCCTGAAGACTGGAGGACTAAGAGAACTATTCTAATTCTACTCCACTAGCACTAGAATACTAAACTAAACTTTAGAGTGAGCTTGATCTTTTTCTCGGAGTGTGTGAAGGAGTGGAGGAGGTGAAGCCTATTTATAGCTCAAGTATGACTGTTTGACTGTTGTGGCGGTTGGAATGGTCGGAAATGCCCCACAACCGTCATTGAGAAGCAATCTTGGACGTCCACGTGGAGGGCCGAGCTGAGACGACATAACCAGGATTCGGCCGAATAAGGAAGGTTAGAATATCCTAAACAAAAAAAGGAATGAAGGTTTCCACTCATGCGCATCAATCACAGCACACAAATGAAATAAATTAAAAAATAATTCCAAAAAGGTAAAACAAAACTGTAATGTGCACATGATATTTTGGTTTTACAAAATAGTTAACCTTGTAAATCAGGAGGTGTGGTCCAAATGCTTCTTTTCATTGTACCTGTTCTGCTTTTCTTGGCTGAACTTGTGCTTGCAGAGTTCGCTGAGAAGCTGTCCCTCCCCCCTGCTTGGGATCCAGTTTGCCCCATGGTTGGCTGCTGG]

[+] EMBL CA760111             [TTTTTTGGAGCAACAAAGTACAACATAGATAGATTATACCTTTATTAGGAGGTCACATCTTCAGAGTAACTCCAAGAGAGTGTACCGACACACAAAGAAGAAGCAGCGGAAATCTCCTGAAGACTGGAGGACTAAGAGAACTATTCTAATTCTACTCCACTAGCACTAGAATACTAAACTAAACTTTAGAGTGAGCTTGATCTTTTTCTCGGAGTGTGTGAAGGAGTGGAGGAGGTGAAGCCTATTTATAGCTCAAGTATGACTGTTTGACTGTTGTGGCGGTTGGAATGGTCGGAAATGCCCCACAACCGTCATTGAGAAGCAATCTTGGACGTCCACGTGGAGGGCCGAGCTGAGACGACATAACCAGGATTCGGCCGAATAAGGAAGGTTAGAATATCCTAAACAAAAAAAGGAATGAAGGTTTCCACTCATGCGCATCAATCACAGCACACAAATGAAATAAATTAAAAAATAATTCCAAAAAGGTAAAACAAAACTGTAATGTGCACATGATATTTTGGTTTTACAAAATAGTTAACCTTGTAAATCAGGAGGTGTGGTCCAAATGCTTCTTTTCATTGTACCTGTTCTGCTTTTCTTGGCTGAACTTGTGCTTGCAGAGTTCGCTGAGAAGCTGTCCCTCCCCCCTGCTTGGGATCCAGTTTGCCCCATGGTTGGCTGCTGG]




>consensus_11379#1
TTTTTTGGAGCAACAAAGTACAACATAGATAGATTATACCTTTATTAGGAGGTCACATCT
TCAGAGTAACTCCAAGAGAGTGTACCGACACACAAAGAAGAAGCAGCGGAAATCTCCTGA
AGACTGGAGGACTAAGAGAACTATTCTAATTCTACTCCACTAGCACTAGAATACTAAACT
AAACTTTAGAGTGAGCTTGATCTTTTTCTCGGAGTGTGTGAAGGAGTGGAGGAGGTGAAG
CCTATTTATAGCTCAAGTATGACTGTTTGACTGTTGTGGCGGTTGGAATGGTCGGAAATG
CCCCACAACCGTCATTGAGAAGCAATCTTGGACGTCCACGTGGAGGGCCGAGCTGAGACG
ACATAACCAGGATTCGGCCGAATAAGGAAGGTTAGAATATCCTAAACAAAAAAAGGAATG
AAGGTTTCCACTCATGCGCATCAATCACAGCACACAAATGAAATAAATTAAAAAATAATT
CCAAAAAGGTAAAACAAAACTGTAATGTGCACATGATATTTTGGTTTTACAAAATAGTTA
ACCTTGTAAATCAGGAGGTGTGGTCCAAATGCTTCTTTTCATTGTACCTGTTCTGCTTTT
CTTGGCTGAACTTGTGCTTGCAGAGTTCGCTGAGAAGCTGTCCCTCCCCCCTGCTTGGGA
TCCAGTTTGCCCCATGGTTGGCTGCTGG

consensusID : consensus_11379#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 670
fasta sequence

                              [ATTCTNTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGGGGAGTCTCGCTTCTCCGATCACAGGCCAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCTNAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTTTTTTTCTTTTTATCTGCTTAGAGTATCAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTTAAAAAAAAAAAAAA]

[-] EMBL CA758960             [ATTCTNTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGGGGAGTCTCGCTTCTCCGATCACAGGCCAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCTNAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTTTTTTTCTTTTTATCTGCTTAGAGTATCAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTTAAAAAAAAAAAAAA]




>consensus_11379#2
ATTCTNTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGGGGAGTCTCGCTTC
TCCGATCACAGGCCAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGG
AGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTCT
NAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAG
GGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGAT
ATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGATATTGGGCAATTTTGCAGGCAAC
CATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTT
AGCTTCTTAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTTTTTTTCTTTTTATCTGCTTA
GAGTATCAATAAACACCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCA
GCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGAC
AAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTTAAAA
AAAAAAAAAA

consensusID : consensus_11379#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence

                              [CAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTTTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGTACAATTTTCAATTTTGCAGATATAATTAAATGAAAACCTCTTGCAAAACCTAAGTTGATTGACACTGTTTTTATGGTGCCATTTCAGGATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTTTTAGTTTTTTTGAGCAAGCTAAAGCTTCCTTTTTTTTTTCTTTTTCTTTTTATCTGCTTAGAGTATCAATAAACCCCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCT]

[-] EMBL CB663578             [CAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTTTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGTACAATTTTCAATTTTGCAGATATAATTAAATGAAAACCTCTTGCAAAACCTAAGTTGATTGACACTGTTTTTATGGTGCCATTTCAGGATATTGGGCAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTTTAGCTTTTTAGTTTTTTTGAGCAAGCTAAAGCTTCCTTTTTTTTTTCTTTTTCTTTTTATCTGCTTAGAGTATCAATAAACCCCAATATATTATTTTCCCCTTCCCTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCT]




>consensus_11379#3
CAGTGTACAGCATTTTCATGGCAGAAGTTGAGATTGTACACCATAGGAGGAAAAACATGG
GATATTTCAGCTCTAGAATTGAGGTGGAAGAGCTACTACCCCATTTTCAGAGCTACAGAG
AAATAAACTTTTACTGATTTTGAGTTACCAACATGTTGTAAGATTAGGGTACTGGCCAAA
AATACAAACATGCAGGGTTCAAGAGTCAGCTCATTAGGTGATCAGATATACTCAAGCAAG
ATGTGCAAATACTAACTTAAAGGTACAATTTTCAATTTTGCAGATATAATTAAATGAAAA
CCTCTTGCAAAACCTAAGTTGATTGACACTGTTTTTATGGTGCCATTTCAGGATATTGGG
CAATTTTGCAGGCAACCATTATGTCAAATGGAGATGTATCAGCCCATGCCACTAACTATA
CACTCACTCCAACTTTAGCTTTTTAGTTTTTTTGAGCAAGCTAAAGCTTCCTTTTTTTTT
TCTTTTTCTTTTTATCTGCTTAGAGTATCAATAAACCCCAATATATTATTTTCCCCTTCC
CTTTGGAAGCTTTGTAAAACCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAA
ACATTATACTTAGCTTTAGGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATG
TGAGAAGCT

consensusID : consensus_11379#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence

                              [GGCAACTGCTGTTGCAGCTACATCGGCGGTGACGCCGCCACAGCTCCGCCAAGCTAGGCTTCCTCCCGGCGACTGCTCCCCCAATCTCTGGCGCCCTCTCTGTTGTTTGCTCATCGATCATTGAGGGCGAGGTGGTGGGGAAAGGGGACCGTGAAGCAGTGGAGTTCTCGATGGGCGACGGCGATGGCAGGGCGGTTGCTCCCGTGTCTGTCCGCGAGGCAGCCATGGCTATTCCGGTGGCCGTCAGCGAGGTCCCCACGGAGCACTTCGTGAGGGACATCGGCGCAGCCATGGGGGTTCGCTTCCTGGCGTGCGAGGCGACCTACTACAATGGGGATCTCGTAGGTGGAGCTCTTATCCCCAAACCAGCAGCCAACCATGGGGCAAACTGGATCCCAAGGTAGGGATGGTGGTGGTGGAGCAGGGGGGAGGGACAGTTTCTCAGCGAACTCTGCAAGCACAAGTTCAGCCAAGAAAAGCAGAATAGGTACAGTGAAAAGAAGCATTTGGACCACGCCTCCTGATTTACAAGGTTAACTATTTTGTAAAACCAAAATATTATGTGCACATTACAGTTTTGTTTTACCTTTATTGAATTATTTTGTAATTTATTTTATGTGTGTGCTG]

[+] EMBL AK121145             [GGCAACTGCTGTTGCAGCTACATCGGCGGTGACGCCGCCACAGCTCCGCCAAGCTAGGCTTCCTCCCGGCGACTGCTCCCCCAATCTCTGGCGCCCTCTCTGTTGTTTGCTCATCGATCATTGAGGGCGAGGTGGTGGGGAAAGGGGACCGTGAAGCAGTGGAGTTCTCGATGGGCGACGGCGATGGCAGGGCGGTTGCTCCCGTGTCTGTCCGCGAGGCAGCCATGGCTATTCCGGTGGCCGTCAGCGAGGTCCCCACGGAGCACTTCGTGAGGGACATCGGCGCAGCCATGGGGGTTCGCTTCCTGGCGTGCGAGGCGACCTACTACAATGGGGATCTCGTAGGTGGAGCTCTTATCCCCAAACCAGCAGCCAACCATGGGGCAAACTGGATCCCAAGGTAGGGATGGTGGTGGTGGAGCAGGGGGGAGGGACAGTTTCTCAGCGAACTCTGCAAGCACAAGTTCAGCCAAGAAAAGCAGAATAGGTACAGTGAAAAGAAGCATTTGGACCACGCCTCCTGATTTACAAGGTTAACTATTTTGTAAAACCAAAATATTATGTGCACATTACAGTTTTGTTTTACCTTTATTGAATTATTTTGTAATTTATTTTATGTGTGTGCTG]




>consensus_11379#4
GGCAACTGCTGTTGCAGCTACATCGGCGGTGACGCCGCCACAGCTCCGCCAAGCTAGGCT
TCCTCCCGGCGACTGCTCCCCCAATCTCTGGCGCCCTCTCTGTTGTTTGCTCATCGATCA
TTGAGGGCGAGGTGGTGGGGAAAGGGGACCGTGAAGCAGTGGAGTTCTCGATGGGCGACG
GCGATGGCAGGGCGGTTGCTCCCGTGTCTGTCCGCGAGGCAGCCATGGCTATTCCGGTGG
CCGTCAGCGAGGTCCCCACGGAGCACTTCGTGAGGGACATCGGCGCAGCCATGGGGGTTC
GCTTCCTGGCGTGCGAGGCGACCTACTACAATGGGGATCTCGTAGGTGGAGCTCTTATCC
CCAAACCAGCAGCCAACCATGGGGCAAACTGGATCCCAAGGTAGGGATGGTGGTGGTGGA
GCAGGGGGGAGGGACAGTTTCTCAGCGAACTCTGCAAGCACAAGTTCAGCCAAGAAAAGC
AGAATAGGTACAGTGAAAAGAAGCATTTGGACCACGCCTCCTGATTTACAAGGTTAACTA
TTTTGTAAAACCAAAATATTATGTGCACATTACAGTTTTGTTTTACCTTTATTGAATTAT
TTTGTAATTTATTTTATGTGTGTGCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11379#0      TTTTCCTCGGGCAAGAACTGCTTTGTCCACTCCGCTGCCATTTGTGCTGCTCCCTCCTCC 60
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      TCTCCTCCTCGCTGGATTCGTGGCGACCAGGCCGAGAAAAAGAAGCAGAGATAGAGAGAG 120
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      ATAGAAGAGAGAGAGAGAATCAAAGCAAAGCAGCCATAGTGAGAGAGAGAAGAGGAGAAA 180
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      AGAGAGGGATAAAAGGAGCTTGAGCTCACAAACAACAAGCCTCTCTCCTTCTCCTCCTTC 240
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      TTCTTCTTCTCAACGATGTCCTAGCTAGGAATAGCTTCTCTTGTTTGTAGCAGTAGGCTG 300
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CTACGCGAGCCAATCGCCCAATCTGAGCTCCCTAAGGTTGGCAGTGGGCTGCATTGGCGG 360
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CAGAGAGAGAGAGAGAGAGAGATCCCTTGGTTGGACTCCCACCGTCGAAAACCCAATCTT 420
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      GGGTGGCAACTGATTTGGCTGGTTCTTTTTGTTCCAAGATTTGTGGTCAGCGGATCAAAA 480
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      AAATCCTTCCACTTTTTTTGAGGCGATTTGGTTCCGGATTTGAAGGTTTCTTGCCGCGAA 540
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      GATCGCGGGTTGGTACTGTTTTGCCTGGTAGATCCCTTTCGTTTGGCTGCAGAGGAGGAG 600
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CTATGAGACAATGAGAGAAGAGAGCGCCAAGAAGAGCAAGCTTTCATGGTCCAAATCGCT 660
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CGTGAGGAAGTGGTTCAACATCAGGACCAAGGCACAGGACTTCCATGCTGATTCTGAAAC 720
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CACAACCCAAGGTAGGGATGGTGGTGGTGGAGCAGGGGGGAGGGCCAGCTTCTCAGCGAG 780
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CTCTGCAAGCACAAGTTCAGCCAAGAAAAGCAGAACAGACCGGTCGTCGTCGAAGCGGAG 840
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CGCTGATCGCGTCCGCCGAGGGAGGAATGATTTCGATCTAGCACGCCTGACAGAGGTTCA 900
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      AGATTACAGAATCTTTGCCGCAACATGGAATGTCGGAGGCAAGTCCCCACCAAGGGGGCT 960
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      AAATTTAGATGAGTGGCTTCACTCTTCTCCTCCTGCTGATATCTACGTGTTAGGATTTCA 1020
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      GGAGATTGTCCCTTTGAATGCTGGAAATGTTCTTGGCACTGAAGATAATATTCCAGCAAA 1080
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      GAAGTGGGTATCTCTTATTAGGAGGACCCTGAACAAGAATCCTGGGGCCAGTGGTTCTGG 1140
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      TGTCTATCATACGCCGTCACCAGTCCTTAATCCAGTCGTAGAACTAGAAGCTGATTTTGA 1200
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      GGCATCTGCAAGAAGGCAGGAGAACTACTCTTTCTTTCACCGTCGATCATTCCATAATCT 1260
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CAGCCGCAGTTTAAGAATGGATGCAGACTACATGTTCCCACAACCAAAGTTGGACAGAAG 1320
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      ATTTAGCGTTTGTGACCCAGTCAGCTTAGGAGGTAGACCAAGTGACTTTGATGGTAATTT 1380
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      GCGGTGGCTTGGGTCACCAGATGAGGAGAACATCGATGAGGAACTCTCTAACGCTGCACA 1440
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      ATGTTCTCCACTTCCTTATAGCTGCAATACAACGGCACCTACTGAAGCTAACGACGAGCA 1500
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      ACCCAATGGATCAAGGTATTGTTTGGTTGCCAGCAAACAAATGGTTGGCATATTTCTCAC 1560
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      TGTCTGGGTGCGCAATGAAATAAGAGATGATGTGAGAAACTTGAAAGTTTCTTGTGTGGG 1620
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      TAGAGGATTGATGGGTTATCTTGGAAATAAGGGTTCTATATCAATAAGCATGTCTTTGCA 1680
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CCAGACAAGCTTCTGCTTCATTTGTTGCCATTTGACCTCAGGGGAAAAGGAAGGGGATGA 1740
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      ATTGCGCAGGAATTCTGATGTTATGGAAATATTAAGAAAGACAAGGTTTCCACGGGTTCG 1800
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      TGGTGCTAATGATGTCAAATCACCTGAAACGATTCTTGAGCATGACCGTATAATATGGCT 1860
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      TGGGGATTTGAACTATCGTATTGCCCTCTCCTATTGTTCAGCAAGAGCTCTTGTCGAAAT 1920
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      GCATAACTGGAAACAATTATTAGAAAAAGATCAGCTTCGAATACAACAAAGATACGGGAG 1980
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      AGTTTTTCAGGGCTGGAAAGAAGGAAGGATTTATTTTCCTCCCACGTACAAGTATTCGTT 2040
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      CAATTCAGATCGTTATGCCGGAGAGGGCATGCATCCCAAAGAAAAAAGAAGAACGCCTGC 2100
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      --------------------------------------------------GGCAACTGCT 10
consensus_11379#1      ------------------------------------------------------------
                                                                                   

consensus_11379#0      ATGGTGTGATCGCATTCTCTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGG 2160
consensus_11379#2      -------------ATTCTNTGGTATGGTAATGGCCTCAACCAGCTGTGCTATGTTCGTGG 47
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      GTTGCAGCTACATCGGCGGTGACGCCGCCACAGCTCCGCCAAGCTAGGCT-TCCTCCCGG 69
consensus_11379#1      ---------TTTTTTGGAGCAACAAAGT-ACAACATAGATAGATTATACCTTTATTAGGA 50
                                                                                   

consensus_11379#0      GGAGTCTCGCTTCTCCGATCACAGGC-CAGTGT-ACAGCATTTTCATGGCAGAAGTTGAG 2218
consensus_11379#2      GGAGTCTCGCTTCTCCGATCACAGGC-CAGTGT-ACAGCATTTTCATGGCAGAAGTTGAG 105
consensus_11379#3      ---------------------------CAGTGT-ACAGCATTTTCATGGCAGAAGTTGAG 32
consensus_11379#4      CGACT---GCTCCCCCAATCTCTGGCGCCCTCT-CTGTTGTTTGCTCATCGATCATTGAG 125
consensus_11379#1      GGTCACATCTTCAGAGTAACTCCAAGAGAGTGTACCGACACACAAAGAAGAAGCAGCGGA 110
                                                     * *                        *  

consensus_11379#0      ATTGTA-CACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGA------ATTGAGGT 2271
consensus_11379#2      ATTGTA-CACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGA------ATTGAGGT 158
consensus_11379#3      ATTGTA-CACCATAGGAGGAAAAACATGGGATATTTCAGCTCTAGA------ATTGAGGT 85
consensus_11379#4      GGCGAGGTGGTGGGGAAAGGGGACCGTGAAGCAGTGGAGTTCTCGATGGGCGACGGCGAT 185
consensus_11379#1      AATCTCCTGAAGACTGGAGGACTAAGAGAACTATTCTAATTCT---------ACTCCACT 161
                                         *        *    * *  *  ***         *      *

consensus_11379#0      GGAAGAGCTACTACCCCATTCTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGT 2331
consensus_11379#2      GGAAGAGCTACTACCCCATTCTNAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGT 218
consensus_11379#3      GGAAGAGCTACTACCCCATTTTCAGAGCTACAGAGAAATAAACTTTTACTGATTTTGAGT 145
consensus_11379#4      GGCAGGGCGGTTGCTCCCGTGTCTGTCCGCGAGGCAGCCATGGCTATTCCGGT----GGC 241
consensus_11379#1      AGCA---CTAGAATACTAAACTAAACTTTAGAGTGAGCTTGATCTTTTTC--TCGGAGTG 216
                        * *   *       *     *         **  *        * *     *       

consensus_11379#0      TACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAG 2391
consensus_11379#2      TACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAG 278
consensus_11379#3      TACCAACATGTTGTAAGATTAGGGTACTGGCCAAAAATACAAACATGCAGGGTTCAAGAG 205
consensus_11379#4      CGTCAGCGAG--GTCCCCACGGAGCACTT-CGTGAGGGACATCGGCGCAGCCATGGGGGT 298
consensus_11379#1      TGTGAAGGAGTGGAGGAGGTGAAG--CCTATTTATAGCTCAAGTATGACTGTTTGACTGT 274
                           *    *  *          *  *            **     *      *      

consensus_11379#0      T-CAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGG- 2449
consensus_11379#2      T-CAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGG- 336
consensus_11379#3      T-CAGCTCATTAGGTGATCAGATATACTCAAGCAAGATGTGCAAATACTAACTTAAAGGT 264
consensus_11379#4      T-CGCTTCCTGGCGTGC---GAGGCGACCTACTACAATGGGGATCTCGTAGGTGGAGCT- 353
consensus_11379#1      TGTGGCGGTTGGAATGGTCGGAAATGCCCCACAACCGTCATTGAGAAGCAATCTTGGACG 334
                       *        *    **    **      * *  *   *           *          

consensus_11379#0      ------------------------------------------------------------
consensus_11379#2      ------------------------------------------------------------
consensus_11379#3      ACAATTTTCAATTTTGCAGATATAATTAAATGAAAACCTCTTGCAAAACCTAAGTTGATT 324
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      TC---------------------------------------------------------- 336
                                                                                   

consensus_11379#0      ----------------------------ATATTGGGCAATTTTGCAGGCAACCATTATGT 2481
consensus_11379#2      ----------------------------ATATTGGGCAATTTTGCAGGCAACCATTATGT 368
consensus_11379#3      GACACTGTTTTTATGGTGCCATTTCAGGATATTGGGCAATTTTGCAGGCAACCATTATGT 384
consensus_11379#4      ----------------------------CTTATCCCCAAACCAGCAGCCAACCATGGGGC 385
consensus_11379#1      -------------------CACGTGGAGGGCCGAGCTGAGACGACA--TAACCAGGATTC 375
                                                             *     **   *****      

consensus_11379#0      CAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTT-TAGCTTCT 2540
consensus_11379#2      CAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTT-TAGCTTCT 427
consensus_11379#3      CAAATGGAGATGTATCAGCCCATGCCACTAACTATACACTCACTCCAACTT-TAGCTTTT 443
consensus_11379#4      AAACTGGATCCCAAGGTAGGGATGGTGGTGGTGGAGCAGGGGG--GAGGGA-CAGTTTCT 442
consensus_11379#1      GGCCGAATAAGGAAGGTTAGAATATCCTAAACAAAAAAAGGAATGAAGGTTTCCACTCAT 435
                                    *       **              *        *         *  *

consensus_11379#0      TAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTTTTTTTCTTTTT------ATCTGCTTAG 2594
consensus_11379#2      TAGTTTCTCTGAGCAAGCTAATGCTTCCTTTTTTTTTTCTTTTT------ATCTGCTTAG 481
consensus_11379#3      TAGTTTTTTTGAGCAAGCTAAAGCTTCCTTTTTTTTTTCTTTTTCTTTTTATCTGCTTAG 503
consensus_11379#4      CAGCGAA-CTCTGCAAGCACAAGTTCAGCCAAGAAAAGCAGAAT----------AGGTAC 491
consensus_11379#1      GCGCATCAATCACAGCACACAAATGAAATAAATTAAAAAATAAT---TCCAAAAAGGTAA 492
                         *      *       *  *                      *             ** 

consensus_11379#0      AGTATCAATA-AACACCAATATATTATTTTCCCCTTCCCT---TTGGAAGCTTTGTAAAA 2650
consensus_11379#2      AGTATCAATA-AACACCAATATATTATTTTCCCCTTCCCT---TTGGAAGCTTTGTAAAA 537
consensus_11379#3      AGTATCAATA-AACCCCAATATATTATTTTCCCCTTCCCT---TTGGAAGCTTTGTAAAA 559
consensus_11379#4      AGTGAAAAGA-AGCATTTGGACCACGCCTCCTGATTTACAAGGTTAACTATTTTGTAAAA 550
consensus_11379#1      AACAAAACTGTAATGTGCACATGATATTTTG-GTTTTACAAAATAGTTAACCTTGTAAAT 551
                       *     *    *        *       *     **  *    *        ******* 

consensus_11379#0      CCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTT-TA 2709
consensus_11379#2      CCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTT-TA 596
consensus_11379#3      CCAGCTAGTGTATCCCATGCAAGTTGTGGAATTATTGTAAAACATTATACTTAGCTT-TA 618
consensus_11379#4      CC----AAAATATTATGTGCACATTACAGTTTTGTTTTACCTTTATTGAATTATTTTGTA 606
consensus_11379#1      C-----AGGAGGTGTGGTCCAAATGCTTCTTTTCATTGTACCTGTTCTGCTTTTCTT--G 604
                       *     *     *    * **  *       **  *         *    **   **   

consensus_11379#0      GGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTT 2769
consensus_11379#2      GGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCTTGCACAGTT 656
consensus_11379#3      GGACAAACTGTTCCTAGGCTGAGGGAGGAATGATGAGACATGTGAGAAGCT--------- 669
consensus_11379#4      ATTTATTTTATGTGTGTGCTG--------------------------------------- 627
consensus_11379#1      GCTGAACTTGTGCTTGCAGAGTTCGCTGAGAAGCTGTCCCTCCCCCCTGCTTGGGATCCA 664
                           *   * *   *     *                                       

consensus_11379#0      ACAATCATGTGTATAACCTTTTTATTTTGGTGCCTGAACAGTCAAGTAAGGCATGCATTA 2829
consensus_11379#2      AAAAAAAAAAAAAA---------------------------------------------- 670
consensus_11379#3      ------------------------------------------------------------
consensus_11379#4      ------------------------------------------------------------
consensus_11379#1      GTTTGCCCCATGGTTGGCTGCTGG------------------------------------ 688
                                                                                   

consensus_11379#0      GTACTACTCAT 2840
consensus_11379#2      -----------
consensus_11379#3      -----------
consensus_11379#4      -----------
consensus_11379#1      -----------