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Oryza sativa
cluster # 11388 cluster # 11388       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11388#0 length = 1033 sequences # 3  
consensus_11388#1 length = 847 sequences # 4  
consensus_11388#2 length = 810 sequences # 1  
consensus_11388#3 length = 157 sequences # 1  

consensusID : consensus_11388#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1033
fasta sequence
                              [TCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGTGTACGTAGCCTACGCAAAAATAGGATTGGGAGTCAAAAGGAAGAAACGAAGCATATCGTGAATTGGTCAGCCAGCCACATTACCAATTTTCTCCGGCAGCATTGAGGTATAGAAATCATAATAGACATTAGAGTCTAGCTCTCGGCTGGTTGATCTTCCACACACTGTAACTGTTGGTGTAGTTTAACAAACCGATGAAGCAATGTAGTGGAGATGCTCTAGTTGTCCAGACGAGAAATGGCGGCACTGAAGCTGGTCAGATCAGGATGAAGCAGCAAAGGCCTGCC-GTTGTTGGCCAAGAAATTCTGAAACTATCAAGTACACCTTCAGGATCAATATATGGTAGCATCATCCTTTTGAAGCGTCGTCTAAAATCCTTACGTACCAAGCCCTGTTAGCTCAGTTTTTCTACTGAACATGAACACATTTACTTGTCTATAGCTAGCTAGTATTTGTCGATCCGGAGGTTAGAAACACAAACAAAAATGATATCGTGGTCCGACCAAAATGGGACGGACATACCCCACAATGGCGCCGTGTGGACCCAACTGAAACATT-GGGTAGTTGGCGACAGCTCTTTTGGGCTGAAACTTCTAAGTTTTCAAGTGATGAGGTATATTCTATTAAAAAA]

[+] EMBL AK100176             [TCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGTGTACGTAGCCTACGCAAAAATAGGATTGGGAGTCAAAAGGAAGAAACGAAGCATATCGTGAATTGGTCAGCCAGCCACATTACCAATTTTCTCCGGCAGCATTGAGGTATAGAAATCATAATAGACATTAGAGTCTAGCTCTCGGCTGGTTGATCTTCCACACACTGTAACTGTTGGTGTAGTTTAACAAACCGATGAAGCAATGTAGTGGAGATGCTCTAGTTGTCCAGACGAGAAATGGCGGCACTGAAGCTGGTCAGATCAGGATGAAGCAGCAAAGGCCTGCC GTTGTTGGCCAAGAAATTCTGAAACTATCAAGTACACCTTCAGGATCAATATATGGTAGCATCATCCTTTTGAAGCGTCGTCTAAAATCCTTACGTACCAAGCCCTGTTAGCTCAGTTTTTCTACTGAACATGAACACATTTACTTGTCTATAGCTAGCTAGTATTTATCGATCCGGAGGTTAGAAACACAAACAAAAATGATATCGTGGTCCGACCAAAATGGGACGGACATACCCCACAATGGCGCCGTGTGGACCCAACTGAAACATT GGGTAGTTGGCGACAGCTCTTTTGGGCTGAAACTTCTAAGTTTTCAAGTGATGAGGT                ]
[+] EMBL C28080               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCACTGAAGCTGGTCAGATCAGGATGAAGCAGCAAAGGCCTGCCTNTGGTTGGCCAAGAAATTCTGAAACTATCAAGTACACCTTCAGGATCAATATATGGTAGCATCATCCTTTTGAAGCGTCGTCTAAAATCCTTACGTACCAAGCCCTGTTAGCTCAGTTTTTCTACTGAACATGAACACATTTACTTGTCTATAGCTAGCTAGTATTTGTCGATCCGGA GTTAGAAACACAAACAAAAATGATATCGTGGTCCGACCAAAATGGGACGGACATACCCCACAATGGCGCCGTGTGGACCCAACTGAAACATTNGGGT                                                                     ]
[+] EMBL AU091571             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACTGAAGCTGGTCAGATCAGGATGAAGCAGCAAAGGCCTGCC GTTGTTGGCCAAGAAATTCTGAAACTATCAAGTACACCTTCAGGATCAATATATGGTAGCATCATCCTTTTGAAGCGTCGTCTAAAATCCTTACGTACCAAGCCCTGTTAGCTCAGTTTTTCTACTGAACATGAACACATTTACTTGTCTATAGCTAGCTAGTATTTGTCGATCCGGAGGTTAGAAACACAAACAAAAATGATATCGTGGTCCGACCAAAATGGGACGGACATACCCCACAATGGCGCCGTGTGGACCCAACTGAAACATT GGGTAGTTGGCGACAGCTCTTTTGGGCTGAAACTTCTAAGTTTTCAAGTGATGAGGTATATTCTATTAAAAAA]


>consensus_11388#0 TCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTCCTC ACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGGAAA CCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCC GCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCG GCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACG AACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCG TGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGTGTACGTAGCCTACGCAAA AATAGGATTGGGAGTCAAAAGGAAGAAACGAAGCATATCGTGAATTGGTCAGCCAGCCAC ATTACCAATTTTCTCCGGCAGCATTGAGGTATAGAAATCATAATAGACATTAGAGTCTAG CTCTCGGCTGGTTGATCTTCCACACACTGTAACTGTTGGTGTAGTTTAACAAACCGATGA AGCAATGTAGTGGAGATGCTCTAGTTGTCCAGACGAGAAATGGCGGCACTGAAGCTGGTC AGATCAGGATGAAGCAGCAAAGGCCTGCCGTTGTTGGCCAAGAAATTCTGAAACTATCAA GTACACCTTCAGGATCAATATATGGTAGCATCATCCTTTTGAAGCGTCGTCTAAAATCCT TACGTACCAAGCCCTGTTAGCTCAGTTTTTCTACTGAACATGAACACATTTACTTGTCTA TAGCTAGCTAGTATTTGTCGATCCGGAGGTTAGAAACACAAACAAAAATGATATCGTGGT CCGACCAAAATGGGACGGACATACCCCACAATGGCGCCGTGTGGACCCAACTGAAACATT GGGTAGTTGGCGACAGCTCTTTTGGGCTGAAACTTCTAAGTTTTCAAGTGATGAGGTATA TTCTATTAAAAAA



consensusID : consensus_11388#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 847
fasta sequence
                              [TTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGCTCCGCCACCTTGTGCCCCGCCATCG-CCGTCGCTCGCTCGCTCGCTCAT-GAGCTGTTGCTTGTTTTGCCGCTGCGACTCGCCGTTCCTAGCCTCGCCGCCGACATATCCACTCACGAGCTCGCACCCGCCACCGTCGTCGCCATCGCCTGTTCTCGGCCAGGGTTAGGATTGGAGCAGCATAGAGAACAAGCGACGACTACTTAACCTAGTATATATAGTAGTATTTTTCTTTCAACTACTTGCAAGCGTGAGCTTCTTCAGTTGACCCAAATTGAACAACATATTATGGAATTTATCAGGATGTACGATCCTTCATTATTTCTACATCCTCCATTTCAAAATGAGTTAACCTATTGTTCAGATTTGCAGTACTAGCATATTCAATATTAGATTAACTTATTTTGGTACGAAAAAAAAAAAAAAAAAANTTNAAAAAAANNAA]

[+] EMBL AK071577             [TTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGCTCCGCCACCTTGTGCCCCGCCATCG CCGTCGCTCGCTCGCTCGCTCAT GAGCTGTTGCTTGTTTTGCCGCTGCGACTCGCCGTTCCTAGCCTCGCCGCCGACATATCCACTCACGAGCTCGCACCCGCCACCGTGGTCGCCATCGCCTGTTCTCGGCCAGGGTTAGGATTGGAGCAGCATAGAGAACAAGCGACGACTACATAACCTAGTATATATAGTAGTATTTTTCTTTCAACTACTTGCAAGCGTGAGCTTCTTCAGTTGACCCAAATTGAACAACATATTATGGAATTTATCAGGATGTACGATCCTTCATTATTTCTACATCCTCCATTTCAAAATGAGTTAACCTATTGT                                                                                     ]
[+] EMBL AU075863             [                                               CCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGTACCACCGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGCTCCGCCACCTTGTGCNCCGCCATCGNCGGTCGCTCGCTCGCTCGCTCATGGAGCTGTTGCTTGTTTTG                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OS0185A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCGCTGCGACTCGCCGTTCCTAGCCTCGCCGCCGACATATCCACTCACGAGCTCGCACCCGCCACCGTCGTCGCCATCGCCTGTTCTCGGCCAGGGTTAGGATTGGAGCAGCATAGAGAACAAGCGACGACTACTTAACCTAGTATATATAGTAGTATTTTTCTTTCAACTACTTGCAAGCGTGAGCTTCTTCAGTTGACCCAAATTGAACAACATATTATGGAATTTATCAGGATGTACGATCCTTCATTATTTCTACATCCTCCATTTCAAAATGAGTTAACCTATTGTTCAGATTTGCAGTACTAGCATATTCAATATTAGATTAACTTA                                           ]
[+] EMBL C97951               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCTGCGACTCGCCGTTCCTAGCCTCGCCGCCGACATATCCACTCACGAGCTCGCACCCGCCACCGTCGTCGCCATCGCCTGTTCTCGGCCAGGGTTAGGATTGGAGCAGCATAGAGAACAAGCGACGACTACTTAACCTAGTATATATAGTAGTATTTTTCTTTCAACTACTTGCAAGCGTGAGCTTCTTCAGTTGACCCAAATTGAACAACATATTATGGAATTTATCAGGATGTACGATCCTTCATTATTTCTACATCCTCCATTTCAAAATGAGTTAACCTATTGTTCAGATTTGCAGTACTAGCATATTCAATATTAGATTAACTTATTTTGGTACGAAAAAAAAAAAAAAAAAANTTNAAAAAAANNAA]


>consensus_11388#1 TTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTC CTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGG AAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCC GCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGT CCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACG ACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGC CCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGCTCCGCCACCTTGTGC CCCGCCATCGCCGTCGCTCGCTCGCTCGCTCATGAGCTGTTGCTTGTTTTGCCGCTGCGA CTCGCCGTTCCTAGCCTCGCCGCCGACATATCCACTCACGAGCTCGCACCCGCCACCGTC GTCGCCATCGCCTGTTCTCGGCCAGGGTTAGGATTGGAGCAGCATAGAGAACAAGCGACG ACTACTTAACCTAGTATATATAGTAGTATTTTTCTTTCAACTACTTGCAAGCGTGAGCTT CTTCAGTTGACCCAAATTGAACAACATATTATGGAATTTATCAGGATGTACGATCCTTCA TTATTTCTACATCCTCCATTTCAAAATGAGTTAACCTATTGTTCAGATTTGCAGTACTAG CATATTCAATATTAGATTAACTTATTTTGGTACGAAAAAAAAAAAAAAAAAANTTNAAAA AAANNAA



consensusID : consensus_11388#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 810
fasta sequence
                              [CCTCTCCTTCCTTCGGCCTTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGAGAACGCAGAACAAATCTTTGAAAAGGCAAGCAAGAAGTAGGTGTACGTGAACTATCAGGTAATTAGGAAAACACATATGGGGAGCATTGATCAATGATCTCCTCGTCACCCACAAATACCTTTAGGCTTGGAAGACATCAAGAATACAGTAGGGACACTTGTATCCAAGGGCGGAGACAAGGGTAGAGCAGCTAGAGCTTGGGAATTTGATGAAACTACTACTGGCTCAGTATAACGGTGTTTAGGCATGTGTCTTAGGGTTTTTAATGGAACTTCATGGGTTGTTAGATGGCACGAACATTGAGTTTCTAATTGTTCTATTTGTATCAGAAGCTACAACATGTAAAGTTGAGTTACATTGTTTGTCTTCAAAGTAAAAGAGACAGA]

[+] EMBL AK111270             [CCTCTCCTTCCTTCGGCCTTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATGCGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCACCGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCGCCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGGAGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAAGCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGCAATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAGAGAGAACGCAGAACAAATCTTTGAAAAGGCAAGCAAGAAGTAGGTGTACGTGAACTATCAGGTAATTAGGAAAACACATATGGGGAGCATTGATCAATGATCTCCTCGTCACCCACAAATACCTTTAGGCTTGGAAGACATCAAGAATACAGTAGGGACACTTGTATCCAAGGGCGGAGACAAGGGTAGAGCAGCTAGAGCTTGGGAATTTGATGAAACTACTACTGGCTCAGTATAACGGTGTTTAGGCATGTGTCTTAGGGTTTTTAATGGAACTTCATGGGTTGTTAGATGGCACGAACATTGAGTTTCTAATTGTTCTATTTGTATCAGAAGCTACAACATGTAAAGTTGAGTTACATTGTTTGTCTTCAAAGTAAAAGAGACAGA]


>consensus_11388#2 CCTCTCCTTCCTTCGGCCTTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATG CGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCAC CGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCG CCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGG AGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAA GCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGC AATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAG AGAGAACGCAGAACAAATCTTTGAAAAGGCAAGCAAGAAGTAGGTGTACGTGAACTATCA GGTAATTAGGAAAACACATATGGGGAGCATTGATCAATGATCTCCTCGTCACCCACAAAT ACCTTTAGGCTTGGAAGACATCAAGAATACAGTAGGGACACTTGTATCCAAGGGCGGAGA CAAGGGTAGAGCAGCTAGAGCTTGGGAATTTGATGAAACTACTACTGGCTCAGTATAACG GTGTTTAGGCATGTGTCTTAGGGTTTTTAATGGAACTTCATGGGTTGTTAGATGGCACGA ACATTGAGTTTCTAATTGTTCTATTTGTATCAGAAGCTACAACATGTAAAGTTGAGTTAC ATTGTTTGTCTTCAAAGTAAAAGAGACAGA



consensusID : consensus_11388#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 157
fasta sequence
                              [ATTATTTCTACATCCTCCATTTCAAAATGNGTTANCCTATTGTTCAGATTTGCAGTNCTNGCATATTCAATATTAGATTNACTTATTTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU095640             [ATTATTTCTACATCCTCCATTTCAAAATGNGTTANCCTATTGTTCAGATTTGCAGTNCTNGCATATTCAATATTAGATTNACTTATTTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11388#3 ATTATTTCTACATCCTCCATTTCAAAATGNGTTANCCTATTGTTCAGATTTGCAGTNCTN GCATATTCAATATTAGATTNACTTATTTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11388#1      ------------------TTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATG 42
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      ---------------------TCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATG 39
consensus_11388#2      CCTCTCCTTCCTTCGGCCTTTTCTCGCTCCCCTTCCTCCTGCGCACGCGTTCTCCCGATG 60
                                                                                   

consensus_11388#1      CGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCAC 102
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      CGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCAC 99
consensus_11388#2      CGCCGCCGCCTCCTGCTCCTCACGCCACCGTTCTGTGCCGCCGGCCCCGCAAGGGACCAC 120
                                                                                   

consensus_11388#1      CGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCG 162
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      CGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCG 159
consensus_11388#2      CGCGCCGCCCCGCCTCGGAAACCGCCTGGGCGCCGCCACCTCCTGCCGCCGTCACCTGCG 180
                                                                                   

consensus_11388#1      CCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGG 222
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      CCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGG 219
consensus_11388#2      CCGACTTCGCGAGGAGCCGCCGCGTCGCCTGCCTTGGGAAGCCGCCGCCTGCCACCTGGG 240
                                                                                   

consensus_11388#1      AGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAA 282
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      AGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAA 279
consensus_11388#2      AGCACCCGCCGTCGAAGTCCGGCGCCGGTTCCTCGCCGGGAACCGCCGCCGCCGCCGCAA 300
                                                                                   

consensus_11388#1      GCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGC 342
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      GCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGC 339
consensus_11388#2      GCTCCTGCCCGAGCTACGACGAACGCCGCGCCGAGCACCACGCCGCTGCACGCCGCCTGC 360
                                                                                   

consensus_11388#1      AATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAG 402
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      AATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAG 399
consensus_11388#2      AATGACGCCTCCAGCCGCCCGTGAACTCGCCGCCCCAAACCACGCTGCCCACGAAATCAG 420
                                                                                   

consensus_11388#1      AGCTCCGCCACCTTGTGCCCCGCCATCGCCGTCGCTCGCTCGCTCGCTCATGAGCTGTTG 462
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      AGTGTACGTAGCCTACGCAAAAATAGGATTGGGAGTCAAAAGGAAGAAACGAAGCATATC 459
consensus_11388#2      AGAGAACGCAG---------AACAAATCTTTGAAAAGGCAAGCAAGAAGT-AGGTGTA-C 469
                                                                                   

consensus_11388#1      CTTGTTTTGCCGCTGCGACTCGCCGTTCCTAGCCTCGCCGCCGACATATCCACTCACGAG 522
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      GTGAATTGGTCAGCCAGCCACATTACCAATTTTCTCCGGCAGCATTGAGGTATAGAAATC 519
consensus_11388#2      GTGAACTA-TCAGGTAATTAGGAAAACACATAT---GGGGAGCATTGATCAAT-GATCTC 524
                                                                                   

consensus_11388#1      CTCGCACCCGCCACCGTCGTCGCCATCGCCTGTTCTCGGCCAGGGTTAGGATTGGAGCAG 582
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      ATAATAGACATTAGAGTCTAGCTCTCGGCTGGTTGATCTTCCACACACTGTAACTGTTGG 579
consensus_11388#2      CTCGTCACCCACAAA---TACCTTTAGGCTTGGAAGACATCAAGAAT-----ACAGTAGG 576
                                                                                   

consensus_11388#1      CATAGAGAACAAGCGACGACTACTTAACCTAGTATATATAGTAGTATTTTTCTTTCAACT 642
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      TGTAGTT-TAACAAACCGATGAAGCAATGTAGTGGAGATGCTCTAGTTGTCCAGACGAGA 638
consensus_11388#2      GACACTTGTATCCAAGGGCGGAGACAAGG--GTAGAGCAGCTAGAGCTTG------GGAA 628
                                                                                   

consensus_11388#1      ACTTGCAAGCGTGAGCTTCTTCAGTTGACCCAAATTGAACAACATATTATGGAATTTATC 702
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      AATGGCGGCACTGAAGCTGGTCAGATCAGGATGAAGCAGCAAAGGCCTGCCGTTGTTGGC 698
consensus_11388#2      TTTGATGAAACTACTACTGGC----TCAGTATAACGGTGTTTAGGCATGTGTCTTAGGGT 684
                                                                                   

consensus_11388#1      AGGATG----TACGATCCTTCATTATTTCTACATCCTCCATTTCAAAATGAGTTAACCTA 758
consensus_11388#3      ---------------------ATTATTTCTACATCCTCCATTTCAAAATGNGTTANCCTA 39
consensus_11388#0      CAAGAAATTCTGAAACTATCAAGTACACCTTCAGGATCAATATATGGTAGCATCATCCTT 758
consensus_11388#2      TTTTAA----TGGAACT-TCATGGGTTGTTAGATGGCACGAACATTG-AGTTTCTAATTG 738
                                                    *  *                *  *     * 

consensus_11388#1      TTGTTCAGATTTGCAGTACTAGCATATTCAATATTAGATTAACTTATTTTGGTACGAAAA 818
consensus_11388#3      TTGTTCAGATTTGCAGTNCTNGCATATTCAATATTAGATTNACTTATTTTGGTAAAAAAA 99
consensus_11388#0      TTGAAGCGTCGTCTAAAATCCTTACGTACCAAGCCCTGTTAGCTCAGTTTTTCTACTGAA 818
consensus_11388#2      TTCTATTTGTATCAGAAGCTACAACATGTAAAGTTGAGTTA-CATTGTTTGTCTTCAAAG 797
                       **         *           *  *   *       **  *    ***        * 

consensus_11388#1      AAAAAAAAAAAAAANTTNAAAAAAANNAA------------------------------- 847
consensus_11388#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-- 157
consensus_11388#0      CATGAACACATTTACTTGTCTATAGCTAGCTAGTATTTGTCGATCCGGAGGTTAGAAACA 878
consensus_11388#2      TA-AAAGAGACAGA---------------------------------------------- 810
                        *  ** * *   *                                              

consensus_11388#1      ------------------------------------------------------------
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      CAAACAAAAATGATATCGTGGTCCGACCAAAATGGGACGGACATACCCCACAATGGCGCC 938
consensus_11388#2      ------------------------------------------------------------
                                                                                   

consensus_11388#1      ------------------------------------------------------------
consensus_11388#3      ------------------------------------------------------------
consensus_11388#0      GTGTGGACCCAACTGAAACATTGGGTAGTTGGCGACAGCTCTTTTGGGCTGAAACTTCTA 998
consensus_11388#2      ------------------------------------------------------------
                                                                                   

consensus_11388#1      -----------------------------------
consensus_11388#3      -----------------------------------
consensus_11388#0      AGTTTTCAAGTGATGAGGTATATTCTATTAAAAAA 1033
consensus_11388#2      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)