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Oryza sativa
cluster # 11397 cluster # 11397       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11397#0 length = 1085 sequences # 5  
consensus_11397#1 length = 519 sequences # 1  
consensus_11397#2 length = 431 sequences # 2  
consensus_11397#3 length = 204 sequences # 1  

consensusID : consensus_11397#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1085
fasta sequence
                              [CCTCCCTCCCTCCTCCTCCGTCTCCATCCAACGCCGACGACTCGAGCCTCGACGGCGACGACCCCACACCGGCGGCGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCCTCAGCGTGGTGGTGCTCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTCTAAAGACCCAGGAGCTATATGCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTCATTTTATATCTCTGTATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAATAGTTTGGTACATGAGGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACACCTTTCGTCATCACTTCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGAGGTTTACTTTTAGAGAGGTTATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACC--GATAC-TTCACTGAG-CCCCA--TTTC-GTTCA-TTGGATAAGCTGGGTTGCGGGCATC-GTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGACTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACAATGGAAATGCTATCTTTTAGTGTACAACGTGGTATGATCCTTCAGCTTGGAAGAATAAAGTATTCTGTGTTCTGTCTTCATTTTCATAGAAACTGGAGGCTATGCGCAGGG]

[+] EMBL AK104759             [CCTCCCTCCCTCCTCCTCCGTCTCCATCCAACGCCGACGACTCGAGCCTCGACGGCGACGACCCCACACCGGCGGCGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCCTCAGCGTGGTGGTGCTCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTCTAAAGACCCAGGAGCTATATGCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTCATTTTATATCTCTGTATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAATAGTTTGGTACATGAGGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACACCTTTCGTCATCACTTCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGAGGTTTACTTTTAGAGAGGTTATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACC  GATAC TTCACTGAG CCCCA  TTTC GTTCA TTGGATAAGCTGGGTTGCGGGCATC GTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGACTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACAATGGAAATGCTATCTTTTAGTGTACAACGTGGTATGATCCTTCAGCTTGGAAGAATAAAGTATTCTGTG                                          ]
[+] EMBL AK060156             [CCTCCCTCCCTCCTCCTCCGTCTCCATCCAACGCCGACGACTCGAGCCTCGACGGCGACGACCCCACACCGGCGGCGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCCTCAGCGTGGTGGTGCTCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTCTAAAGACCCAGGAGCTATATGCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTCATTTTATATCTCTGTATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAATAGTTTGGTACATGAGGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACACCTTTCGTCATCACTTCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGAGGTTTACTTTTAGAGAGGTTATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACC  GATAC TTCACTGAG CCCCA  TTTC GTTCA TTGGATAAGCTGGGTTGCGGGCATC GTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGACTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACAATGGAAATGCTATCTTTTAGTGTACAACGTGGTATGATCCTTCAGCTTGGAAGAATAAAGTATTCTGTG                                          ]
[+] EMBL AK065994             [                       CCATCCAACGCCGACGACTCGAGCCTCGACGGCGACGACCCCACACCGGCGGCGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCCTCAGCGTGGTGGTGCTCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTCTAAAGACCCAGGAGCTATATGCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTCATTTTATATCTCTGTATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAATAGTTTGGTACATGAGGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACACCTTTCGTCATCACTTCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGAGGTTTACTTTTAGAGAGGTTATGTGGGTATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACC  GATAC TTCACTGAG CCCCA  TTTC GTTCA TTGGATAAGCTGGGTTGCGGGCATC GTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACAATGGAAATGCTATCTTTTAGTGTACAACGTGGTATGATCCTTCAGCTTGGAAGAATAAAGTATTCTGTGTTCTGTCTTCATTTTCATAGAAACTGGAGGCTATGCGCAGGG]
[+] EMBL CF312370             [                       CCATCCAACGCCGACGACTCGAGCCTCGACGGCGACGACCCCACACCGGCGGCGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCCCCTCAGCGTGGTGGTGCTCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTCTAAAGACCCAGGAGCTATATGCACTTGTGTTTGCTGCTCGTTACTTGGGCCTGTTCATTCATTTTATATCTCTGTATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAAT  TTTGGTACATGAGGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACACCTTTCGTCATCACTTCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGAGGTTTACTTTTAGAGAGGTTATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACC  GATAC TTCACTGAG CCCCA  TTTC GTTCA T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI802589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ctTACCCGGATACTTTAACTGAGCCCCCAGGTTTCAGTTCACTTGGATAAGCTTGGTTCCGGGCATCAGTCCAGACTCTCTTGTAT CTGACTTCTTCTACTAGTACATAATGAGCTGGAAGAACCATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCAGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACAATGGAAATGCTATCTTCTAGTGTACAATGTGGTATGATCCTTCAGCTTGGAAGAATAAAGTATTCTGTGTTCaaaaaa                                 ]


>consensus_11397#0 CCTCCCTCCCTCCTCCTCCGTCTCCATCCAACGCCGACGACTCGAGCCTCGACGGCGACG ACCCCACACCGGCGGCGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCC TCAGCGTGGTGGTGCTCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTC TAAAGACCCAGGAGCTATATGCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTC ATTTTATATCTCTGTATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAA TAGTTTGGTACATGAGGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACA CCTTTCGTCATCACTTCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGA GGTTTACTTTTAGAGAGGTTATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTC TACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATG TCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCA CTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGT ATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTAC CAGCCTGAGCTCATTTTTCATCCAAGATAGACTAGGTAAAACTTGTTAAATAGATAGAAA GGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTC TATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTT GTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATA GGTTTTGAGACACAATGGAAATGCTATCTTTTAGTGTACAACGTGGTATGATCCTTCAGC TTGGAAGAATAAAGTATTCTGTGTTCTGTCTTCATTTTCATAGAAACTGGAGGCTATGCG CAGGG



consensusID : consensus_11397#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 519
fasta sequence
                              [GACGAGACAAGGGGGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCAGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTGTTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCT]

[+] EMBL CA764760             [GACGAGACAAGGGGGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCAGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTGTTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCT]


>consensus_11397#1 GACGAGACAAGGGGGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACT TGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCT AGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCA TTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTT CTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGC TCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATAC ACCAAGGCCACTGCTCCAGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTG TTTATTTCTTTTCCTGTTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTA AGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCT



consensusID : consensus_11397#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 431
fasta sequence
                              [TTGGTGATGATGCAGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTATTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTTTGAGTTAAAAAAAAAAAAAAA]

[+] EMBL OSC17741             [TTGGTGATGATGCAGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTATTCCTATT                                                                                                     ]
[-] EMBL CF319698             [                      CGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCCGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTTTGAGTTAAAAAAAAAAAAAAA]


>consensus_11397#2 TTGGTGATGATGCAGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTT CACTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTT GTATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCT ACCAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGA AAGGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGC TCTATCCTCTTGTTTATTTCTATTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACC TTGTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTTTGAGTTAAAA AAAAAAAAAAA



consensusID : consensus_11397#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 204
fasta sequence
                              [TTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCCTTGTATCTTGTTAGACAAAATTTTTAAAAAAGGCCACCAGAGAAGGGGGAAAATTTGGGAAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACACATGGAAATGCTATCTTTTAGTGTAAAAAAAAAA]

[+] EMBL BI806500             [TTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCCTTGTATCTTGTTAGACAAAATTTTTAAAAAAGGCCACCAGAGAAGGGGGAAAATTTGGGAAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACACATGGAAATGCTATCTTTTAGTGTAAAAAAAAAA]


>consensus_11397#3 TTTCCTGCTCTATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAA GGGTCACCCTTGTATCTTGTTAGACAAAATTTTTAAAAAAGGCCACCAGAGAAGGGGGAA AATTTGGGAAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACACATGGAAATG CTATCTTTTAGTGTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      CCTCCCTCCCTCCTCCTCCGTCTCCATCCAACGCCGACGACTCGAGCCTCGACGGCGACG 60
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      ACCCCACACCGGCGGCGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCC 120
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      TCAGCGTGGTGGTGCTCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTC 180
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      TAAAGACCCAGGAGCTATATGCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTC 240
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      ATTTTATATCTCTGTATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAA 300
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      TAGTTTGGTACATGAGGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACA 360
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      CCTTTCGTCATCACTTCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGA 420
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ----------GACGAGACAAGGGGGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTC 50
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      GGTTTACTTTTAGAGAGGTTATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTC 480
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      TACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATG 110
consensus_11397#2      --------------------------------------------------------TTGG 4
consensus_11397#0      TACCTCAACTTGTGTTGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATG 540
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      TCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCA 170
consensus_11397#2      TGATGATGC--AGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCA 62
consensus_11397#0      TCTTCTTTCTAGGTGCATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCA 600
consensus_11397#3      -------------------------------------TTTCCTGCTCTATC--CTCTTGT 21
                                                            *  *  * **** *    ***  

consensus_11397#1      CTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGT 230
consensus_11397#2      CTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGT 122
consensus_11397#0      CTGAGCCCCATTTCGTTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGT 660
consensus_11397#3      TTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCCTTGTATCTTGTT 81
                        *    *   *    **  * **** **  *   * *  *  **   *        *  *

consensus_11397#1      ATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTAC 290
consensus_11397#2      ATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTAC 182
consensus_11397#0      ATGCTGACTTCTTCTACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTAC 720
consensus_11397#3      AGACAAAATTTTTAAAAAAGGCCACCAGAGAAGGGGGAAAATTTGGGAAGTACCAG--GA 139
                       *  *  * ** **  *  *   **  *      **   **   ** ****    **    

consensus_11397#1      CAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAA 350
consensus_11397#2      CAGCCTGAGCTCATTTTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAA 242
consensus_11397#0      CAGCCTGAGCTCATTTTTCATCCAAGATAGACTAGGTAAAACTTGTTAAATAGATAGAAA 780
consensus_11397#3      CGTTCTGAGTTATGATAGGTTTTGAGACACACATGGAAATGCTATCTTTTAGTGTAAAAA 199
                       *   ***** *    *    *   *** *  *  ** **  **   *       ** ***

consensus_11397#1      GGCATGATACACCAAGGCCACTGCTCCAGGTTATGATATATGCATCTTGGTTTCCTGCTC 410
consensus_11397#2      GGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTC 302
consensus_11397#0      GGCATGATACACCAAGGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTC 840
consensus_11397#3      AAAAA------------------------------------------------------- 204
                          *                                                        

consensus_11397#1      TATCCTCTTGTTTATTTCTTTTCCTGTTTGTCGGATGAGAGGAAATCCAAGGGTCACCTT 470
consensus_11397#2      TATCCTCTTGTTTATTTCTATTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTT 362
consensus_11397#0      TATCCTCTTGTTTATTTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTT 900
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      GTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCT----------- 519
consensus_11397#2      GTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTTTGAGTTAAAAAA 422
consensus_11397#0      GTATCTTGTAAGACAATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATA 960
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      AAAAAAAAA--------------------------------------------------- 431
consensus_11397#0      GGTTTTGAGACACAATGGAAATGCTATCTTTTAGTGTACAACGTGGTATGATCCTTCAGC 1020
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      ------------------------------------------------------------
consensus_11397#2      ------------------------------------------------------------
consensus_11397#0      TTGGAAGAATAAAGTATTCTGTGTTCTGTCTTCATTTTCATAGAAACTGGAGGCTATGCG 1080
consensus_11397#3      ------------------------------------------------------------
                                                                                   

consensus_11397#1      -----
consensus_11397#2      -----
consensus_11397#0      CAGGG 1085
consensus_11397#3      -----
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)