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Oryza sativa
cluster # 11401 cluster # 11401       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11401#0 length = 1859 sequences # 6  
consensus_11401#1 length = 1217 sequences # 3  

consensusID : consensus_11401#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1859
fasta sequence
                              [TTCTTTCTCTCCTCTCGCTGTTCCCGACGGAGGAAGGGTGGCAGTGGCACGCACGCACGCCGGCCTCGCCTCAGCCTCGCCTCCTCGCGCGCGCGCGGCCGGACGGGAGGCACACGGTGCGCGGCCGGCCGGCCTCATTCGCTCACCTCGTCATTGAACTATATAAAAAGGTTGTTTGTCATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAGAAAAGGCCCGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAAGCACCCCTGCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAATCTTAGTAGAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGACAGTTTCAGATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAAACCGAAGAGCATAAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCATTCCTGGCTAGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAAGGGGTCATATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTCAAGCTCGTGTCAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAGGTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGAACGCTGGTGTGGCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCTAAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGCAACAGAAAC--CTACAACTCCGCAAGGAC-TTGAACTTGATGACAGCCACTGGGGATCAAACTGGTTAGAGAGGTGGATGGCTGTACGTCCATGGGAGAACAGGTTGCTTGACAGTAACACCAAAGAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGATCACACCAAAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGAAAGGCATAAACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGCCAAATATACCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAGCTTTGGAAGAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACCAAAAGCCAAGCTTGTGCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTAATGTTGGTGGGGGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCTGAT-CCAAAACCAC-GGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGTTGCAGGCCTGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATTTGCTGTCCTCCAGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAATACTGTATCTTAGATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGT-GCACGGTTGTGGGTATGTCGTGCCATATTTTTCTTTTG-CATTTCCATCAGTTTTTTTACCCTCTTGTATGTTGTTGTGAGTTTTGAAAGAAGGAACTATGTTATGTCTGAAAAGTGTGGTCCTGTGCAGCATTGCAGCTGTCTTTCTTTCCTTATAAATTCAAATCTGCCCCTTCTTTATTGTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK067192             [TTCTTTCTCTCCTCTCGCTGTTCCCGACGGAGGAAGGGTGGCAGTGGCACGCACGCACGCCGGCCTCGCCTCAGCCTCGCCTCCTCGCGCGCGCGCGGCCGGACGGGAGGCACACGGTGCGCGGCCGGCCGGCCTCATTCGCTCACCTCGTCATTGAACTATATAAAAAGGTTGTTTGTCATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAGAAAAGGCCCGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAAGCACCCCTGCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAATCTTAGTAGAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGACAGTTTCAGATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAAACCGAAGAGCATAAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCATTCCTGGCTAGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAAGGGGTCATATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTCAAGCTCGTGTCAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAGGTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGAACGCTGGTGTGGCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCTAAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGCAACAGAAAC  CTACAACTCCGCAAGGAC TTGAACTTGATGACAGCCACTGGGGATCAAACTGGTTAGAGAGGTGGATGGCTGTACGTCCATGGGAGAACAGGTTGCTTGACAGTAACACCAAAGAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGATCACACCAAAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGAAAGGCATAAACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGCCAAATATACCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAGCTTTGGAAGAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACCAAAAGCCAAGCTTGTGCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTAATGTTGGTGGGGGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCTGAT CCAAAACCAC GGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGTTGCAGGCCTGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATTTGCTGTCCTCCAGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAATACTGTATCTTAGATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGT GCACGGTTGTGGGTATGTCGTGCCATATTTTTCTTTTG CATTTCCATCAGTTTTTTTACCCTCTTGTATGTTGTTGTGAGTTTTGAAAGAAGGAACTAT                                                                                                        ]
[+] EMBL CA766683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAGTTNTACTGCAGGCCCTTGTAAGGGGTCCTATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTCAAGCTCGTGTTAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAGGTCCCTGAACAAGATGATCATGAGAATCACGTTCGAGAAATTGAGGAACGCTGGTGTGGCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCTAAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGCAACAGAAAC  CTACAACTCCGCAAGGAC TTGAACTTGATGACAGCCACTGGGGATCAAACTGGTTAGAGAGGTGGATGGCTGTACGCCCATGGGAGAACAGGTTGCTTGACAGTAACACCAAAGAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGATCACACCAAAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGAAAGGCATAAACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGCCAAATATACCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAGCTTTGGAAGAAGTCAGCTNCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACC AAAGCCCAGCTTGGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSR02501A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTAGTAAGAGCTCAAGCTCGTGTCAGAGCAAGNCAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAGGTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGCACGCTGGTGTGGCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCTAAGCGTGAGACAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGCAACAGAAACNNCNA AANTCCGCAAGGACTTTGANCTTGATGACAGCCACTGGGGNTCAAACTGGTTAGAGNGGTGGATGGCTGTACGTCCCTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU093396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCA GCAACCAAAAGTCAAAGTTTNCA ATAAAG TTTGGAANAAGTCAGTTCCCAGCCAACAG TCTTGGGTCTTTGTCCACATGCCAACCAAAAGCCAAGCTTG GCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTAATGTTGGT GGGGACCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCTGAT CCAAAACCACGGGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGTTGCAGGCCTGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATTTGCTGTCCTCCAGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAATACTGTATCTTAGATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGT GCACGGTTGTGGGTATGTCGTGCCATATTTTTCTTTTG CATTTCCATCAGTTTTTTTACCCTCTTGTATGTTGTTGTGAGTTTTGAAAGAAGGAACTATGTTATGTCTGAAAAGTGTGGTCCTGTGCAGCATTGCAGCTGTCTTTCTTTCCTTATAAATTCAAATCTGCCCCTTCTTTATTGTTAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU075455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATGCCAACCAAAAGCCAAGCTTGTGCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTAATGTTGGTGGGGGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCTGAT CCAAAACCAC GGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGTTGCAGGCCTGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATTTGCTGTCCTCCAGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAATACTGTATCTTAGATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGTGGCACGGTTGTGGGTATGTCGTGCCATATTTTTCTTTTGNCATTTCCATCAGTTTNTTTACCCTCTTGTATGTTGTTGTGAGTTTTGAAAGAAGGAACTATGTT                                                                                                     ]
[+] EMBL AU075456             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCAAGTCTGATCCCAAAACCAC GGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGTTGCAGGCCTGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATTTGCTGTCCTCCAGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAATACTGTATCTTAGATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGT GCACGGTTGTGGGTATGTCGTGCCATATTTTTCTTTTG CATTTCCATCAGTTTTTTTACCCTCTTGTATGTTGTTGTGAGTTTTGAAAGAAGGAACTATGTTATGTCTGAAAAaaa                                                                                       ]


>consensus_11401#0 TTCTTTCTCTCCTCTCGCTGTTCCCGACGGAGGAAGGGTGGCAGTGGCACGCACGCACGC CGGCCTCGCCTCAGCCTCGCCTCCTCGCGCGCGCGCGGCCGGACGGGAGGCACACGGTGC GCGGCCGGCCGGCCTCATTCGCTCACCTCGTCATTGAACTATATAAAAAGGTTGTTTGTC ATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAGAAAAGGCC CGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAAGCACCCCT GCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAATCTTAGTA GAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGACAGTTTCA GATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAAACCGAAGAGCAT AAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCATTCCTGGCT AGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAAGGGGTCAT ATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTCAA GCTCGTGTCAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAG GTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGAACGCTGGTGTGGC AGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCT AAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGCAA CAGAAACCTACAACTCCGCAAGGACTTGAACTTGATGACAGCCACTGGGGATCAAACTGG TTAGAGAGGTGGATGGCTGTACGTCCATGGGAGAACAGGTTGCTTGACAGTAACACCAAA GAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGATCACACCA AAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGAAAGGCATA AACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGCCAAATATA CCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAGCTTTGGAA GAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACCAAAAGCCAAG CTTGTGCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTAATGTTGGTGGG GGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCT GATCCAAAACCACGGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGTTGCAGGCC TGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATTTGCTGTCCTCC AGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAATACTGTATCTTA GATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGTGCACGGTTGTGGGTATGTCGTGCC ATATTTTTCTTTTGCATTTCCATCAGTTTTTTTACCCTCTTGTATGTTGTTGTGAGTTTT GAAAGAAGGAACTATGTTATGTCTGAAAAGTGTGGTCCTGTGCAGCATTGCAGCTGTCTT TCTTTCCTTATAAATTCAAATCTGCCCCTTCTTTATTGTTAAAAAAAAAAAAAAAAAAA



consensusID : consensus_11401#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1217
fasta sequence
                              [ACACAGCAAAAAAAAAAAGAAATCCAAAAGGGTGGAGTTGGAGCTCAGGAATCCATCCCCAGACAGAGGAGGAGGAGGAGGAAGGGGTGGTCGCCTCGCCAAGTCGGTGGCGATTTTGACCCCTCTTCGCCGCTGGCAAGGTATTACCGTGCTAACTGGTTAAAGGAGAAGGGTTGAAAGGCCAATATGGGCATTTCAGCCAAGTGGATTAAATCACTTGTTGGGATAAAAAAGCATGAAAAAGCACAAACTTCTGAAAGCAGTGGAGTGAGGAGCTCTACTGCGCAGTTGCTACACAAGCGAAAACATTCTATTGATACTGAAAGTGCTGCTGCAGTCGAAGAACTCAGTGTACAAACTGAGCCATTGGCATGTGACACCAACATTCAGGCAATATCAAATATCACCTCCTCACCCGGTACAACTCTTCAAGTATCTCAGATTGAATTGGATACAAGGGAGAATCATGCTGCAATAGTTATTCAATCTGCCTTTCGAGCGTTCTTGGCTAGGAGGGCTTTACGAGCATTAAAAGGATTAGTTAGACTCCAGGCTCTTGTTCGTGGCCATGCTGTCCGAAAGCAAGCAGCAGAAACACTTCAATGTATGCAAGCATTGGTAAGAGCTCAAGCTCGTGTCAGAGCAAGACGAGTTCGAATTTCTTTGGAAAGTCAAGTGACGCAAAAGAAGGCTTCAGAACAGAATGTTCACGAGGACCATGTTTGGGAAATTGAGGAACGCTGGTGTGACGGTATTGGCTCAGCGGAACAAATGCAAGCTAAAGTATTAAAAAGACAGGAAGCTGCTGCTAAGCGGGAAAGAGCAATGGCATACGCTTTAACACACCAGTGGCAAGCAGGTTCCAGGAAACAGAAAGCAGCAACCCTCCAAGGGCTTGAGGTGGATGAGAATCAGTGGAGCCAGAATTGGTTAGAGAGGTGGATGGCTGCACGCCCATGGGAGAACAGGTTGCTTGATACTAATGCCAAAGAGAGTGCTCCAACTGGTGATGATAACCATGCTGATGAAAATG-AGGCCAAGGCTCCGAACAAACCAAAAGGAAAAGTGTCCATTTCTACCACTCATCCGAATGGCTCAAACAAGAAGAACGGTGCAAATCATAAGAAGTCGCATTCCGATATAAGTGGCTCTTCATCAGGGCAATCTGCAGGTGTTCTGCCCACAAATTCTTTGGGATCATCCAAGCTAAAACCAAA]

[+] EMBL AK102525             [ACACAGCAAAAAAAAAAAGAAATCCAAAAGGGTGGAGTTGGAGCTCAGGAATCCATCCCCAGACAGAGGAGGAGGAGGAGGAAGGGGTGGTCGCCTCGCCAAGTCGGTGGCGATTTTGACCCCTCTTCGCCGCTGGCAAGGTATTACCGTGCTAACTGGTTAAAGGAGAAGGGTTGAAAGGCCAATATGGGCATTTCAGCCAAGTGGATTAAATCACTTGTTGGGATAAAAAAGCATGAAAAAGCACAAACTTCTGAAAGCAGTGGAGTGAGGAGCTCTACTGCGCAGTTGCTACACAAGCGAAAACATTCTATTGATACTGAAAGTGCTGCTGCAGTCGAAGAACTCAGTGTACAAACTGAGCCATTGGCATGTGACACCAACATTCAGGCAATATCAAATATCACCTCCTCACCCGGTACAACTCTTCAAGTATCTCAGATTGAATTGGATACAAGGGAGAATCATGCTGCAATAGTTATTCAATCTGCCTTTCGAGCGTTCTTGGCTAGGAGGGCTTTACGAGCATTAAAAGGATTAGTTAGACTCCAGGCTCTTGTTCGTGGCCATGCTGTCCGAAAGCAAGCAGCAGAAACACTTCAATGTATGCAAGCATTGGTAAGAGCTCAAGCTCGTGTCAGAGCAAGACGAGTTCGAATTTCTTTGGAAAGTCAAGTGACGCAAAAGAAGGCTTCAGAACAGAATGTTCACGAGGACCATGTTTGGGAAATTGAGGAACGCTGGTGTGACGGTATTGGCTCAGCGGAACAAATGCAAGCTAAAGTATTAAAAAGACAGGAAGCTGCTGCTAAGCGGGAAAGAGCAATGGCATACGCTTTAACACACCAGTGGCAAGCAGGTTCCAGGAAACAGAAAGCAGCAACCCTCCAAGGGCTTGAGGTGGATGAGAATCAGTGGAGCCAGAATTGGTTAGAGAGGTGGATGGCTGCACGCCCATGGGAGAACAGGTTGCTTGATACTAATGCCAAAGAGAGTGCTCCAACTGGTGATGATAACCATGCTGATGAAAATG AGGCCAAGGCTCCGAACAAACCAAAAGGAAAAGTGTCCATTTCTACCACTCATCCGAATGGCTCAAACAAGAAGAACGGTGCAAATCATAAGAAGTCGCATTCCGATATAAGTGGCTCTTCATCAGGGCAATCTGCAGGTGTTCTGCCCACAAATTCTTTGGGATCATCCAAGCTAAAACCAAA]
[+] EMBL CB670633             [                                                                                                                                                                                                                                                                 AAGCAGTGGAGTGAGGAGCTCTACTGCGCAGTTGCTACACAAGCGAAAACATTCTATTGATACTGAAAGTGCTGCTGCAGTCCCAGAACTCAGTGTACAAACTGAGCCATTGGCATGTGACACCAACATTCAGGCAATATCAAATATCACCTCCTCACCCGGTACAACTCTTCAAGTATCTCAGATTGAATTGGATACAAGGGAGAATCATGCTGCAATAGTTATTCAATCTGCCTTTCGAGCGTTCTTGGCTAAGAGGGCTTTACGAGCATTAAAAGGATTAGTTAGACTCCAGGCTCTTGTTCGTGGCCATGCTGTCCGAAAGCAAGCAGCACAAACACTTCAATGTATGCAAGCATTGGTAAGAGCTCAAGCTCGTGTCAGAGCAAGACGAGTTCCAATTTCTTTGGAAAGTCAAGTGACGCAAAAGAAGGCTTCAGAACAGAATGTTCACGAGGACCATGTTTGGGAAATTGAGGAACGCTGGTGTGACGGTATTGGCTCAGCGGAACAAATGCAAGCTAAAGTATTAAAAAGACAGGAAGCTGCTGCTAAGCGGGAAAGAGCAATGGCATACGCTTTAACACACCAGTGGCAAGCAGGTTCCAGGAAACAGAAAGCAGCAACCCTCCAAGGGCTTGAGGTGGATGAGAATCAGTGGAGCCAGAATTGGTTAGAGAGGTGGATGGCTGCACGCCCATGGGAGAACAGGTTGCTTGATACTAATGCCAAAGAGAGTGCTCCAACTGGTGATGATA                                                                                                                                                                                                           ]
[+] EMBL C26313               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTTCTTTGGAAAGTCAAGTGACGCAAAAGAAGGCTTCAGAACAGAATGTTCACGAGGACCATGTTTGGGAAATTGAGGAACGCTGGTGTGACGGTATTGGCTCAGCGGAACAAATGCAAGCTAAAGTATTAAAAAGACAGGAAGCTGCTGCTAAGCGGGAAAGAGCAATGGCATACGCTTTAACACACCAGTGGCAAGCAGGTTCCAGGAAACAGAAAGCAGCAACCCTCCAAGGGCTTGAGGTGGATGAGAATCAGTGGAGCCAGAATTGGTTAGAGAGGTGGATGGCTGCACGCCCATGGGAGAACAGGTTGCTTGATACTAATGCCAAAGAGAGTTCTCCAACTGGTGATGATAACCATGCTGATGAAAATGAAGGCCAAGGCTCCGACCAACCCAAAAGGA                                                                                                                                                           ]


>consensus_11401#1 ACACAGCAAAAAAAAAAAGAAATCCAAAAGGGTGGAGTTGGAGCTCAGGAATCCATCCCC AGACAGAGGAGGAGGAGGAGGAAGGGGTGGTCGCCTCGCCAAGTCGGTGGCGATTTTGAC CCCTCTTCGCCGCTGGCAAGGTATTACCGTGCTAACTGGTTAAAGGAGAAGGGTTGAAAG GCCAATATGGGCATTTCAGCCAAGTGGATTAAATCACTTGTTGGGATAAAAAAGCATGAA AAAGCACAAACTTCTGAAAGCAGTGGAGTGAGGAGCTCTACTGCGCAGTTGCTACACAAG CGAAAACATTCTATTGATACTGAAAGTGCTGCTGCAGTCGAAGAACTCAGTGTACAAACT GAGCCATTGGCATGTGACACCAACATTCAGGCAATATCAAATATCACCTCCTCACCCGGT ACAACTCTTCAAGTATCTCAGATTGAATTGGATACAAGGGAGAATCATGCTGCAATAGTT ATTCAATCTGCCTTTCGAGCGTTCTTGGCTAGGAGGGCTTTACGAGCATTAAAAGGATTA GTTAGACTCCAGGCTCTTGTTCGTGGCCATGCTGTCCGAAAGCAAGCAGCAGAAACACTT CAATGTATGCAAGCATTGGTAAGAGCTCAAGCTCGTGTCAGAGCAAGACGAGTTCGAATT TCTTTGGAAAGTCAAGTGACGCAAAAGAAGGCTTCAGAACAGAATGTTCACGAGGACCAT GTTTGGGAAATTGAGGAACGCTGGTGTGACGGTATTGGCTCAGCGGAACAAATGCAAGCT AAAGTATTAAAAAGACAGGAAGCTGCTGCTAAGCGGGAAAGAGCAATGGCATACGCTTTA ACACACCAGTGGCAAGCAGGTTCCAGGAAACAGAAAGCAGCAACCCTCCAAGGGCTTGAG GTGGATGAGAATCAGTGGAGCCAGAATTGGTTAGAGAGGTGGATGGCTGCACGCCCATGG GAGAACAGGTTGCTTGATACTAATGCCAAAGAGAGTGCTCCAACTGGTGATGATAACCAT GCTGATGAAAATGAGGCCAAGGCTCCGAACAAACCAAAAGGAAAAGTGTCCATTTCTACC ACTCATCCGAATGGCTCAAACAAGAAGAACGGTGCAAATCATAAGAAGTCGCATTCCGAT ATAAGTGGCTCTTCATCAGGGCAATCTGCAGGTGTTCTGCCCACAAATTCTTTGGGATCA TCCAAGCTAAAACCAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11401#0      TTCTTTCTCTCCTCTCGCTGTTCCCGACGGAGGAAGGGTGGCAGTGGCACGCACGCACGC 60
consensus_11401#1      ---------------------ACACAGCAAAAAAAAAAAGAAATCCAAAAGGGTGGAGTT 39
                                             * *  *  *  **    *  *     * *   * *   

consensus_11401#0      CGGCCTCGCCTCAGCCTCGCCTCCTCGCGCGCGCGCGGCCGGACGGGAGGCACACGGTGC 120
consensus_11401#1      GGAGCTCAGGAATCCATCCCCAGACAGAGGAGGAGGAGGAGGAAGGGGTGGTCGCCTCGC 99
                        *  ***       * ** **     * *   * *  *  *** ***  *  * *   **

consensus_11401#0      GCGGCCGGCCGGCCTCATTCGCTCACCTCGTCATTGA-ACTATATAAAAAGGTTGTTTG- 178
consensus_11401#1      CAAGTCGGTGGCGATTTTGACCCCTCTTCGCCGCTGGCAAGGTATTACCGTGCTAACTGG 159
                          * ***  *   *  *   * * * *** *  **  *   *** *    * *   ** 

consensus_11401#0      TCATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAGAAAAGG 238
consensus_11401#1      TTAAAGGAGAAGGGTTGAAA-GGCCAATATGGGCATTTCAGCCAAGTGGATTAAATCACT 218
                       * *  **       * ***  **   * **      **     ***      * *  *  

consensus_11401#0      CCCGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAAGCACCC 298
consensus_11401#1      TGTTGGG-ATAAAAAAGCATGAAAAAGCACAAACTTCTGAAAGCAGTGGAGTGAGGAGCT 277
                           *     * **** ** ***** ******* * * ** *** * * *   ** * * 

consensus_11401#0      CTGCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAATCTTAG 358
consensus_11401#1      CTACTGCGCAGTTGCTACACAAGCGAAAACATTCTATTGATACTGAAAGTGCTGCTGCAG 337
                       ** **** ******** ***** ** ********* * ********* ****      **

consensus_11401#0      TAGAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGACAGTTT 418
consensus_11401#1      TCGAAGAACTCAGTGTACAAACTGAGCCATTGGCATGTGACACCAACATTCAGGCAATAT 397
                       * ********    ** **** *** ****** *   ***********  *** ** * *

consensus_11401#0      CAGATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAAACCGAAGAGC 478
consensus_11401#1      CAAATATCACCTCCTCACCCGGTACAACTCTTCAAGTA------TCTCAGATTGAATTGG 451
                       ** **  **  ** ***  * *****   ***  ****      ***** *  ***  * 

consensus_11401#0      ATAAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCATTCCTGG 538
consensus_11401#1      ATA---CAAGGGAGAATCATGCTGCAATAGTTATTCAATCTGCCTTTCGAGCGTTCTTGG 508
                       ***   * *  *** **   ******* * * ***** ***** ******** *** ***

consensus_11401#0      CTAGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAAGGGGTC 598
consensus_11401#1      CTAGGAGGGCTTTACGAGCATTAAAAGGATTAGTTAGACTCCAGGCTCTTGTTCGTGGCC 568
                       ****  ********** ***** ****** ****** *** ***** *****  * ** *

consensus_11401#0      ATATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTC 658
consensus_11401#1      ATGCTGTCCGAAAGCAAGCAGCAGAAACACTTCAATGTATGCAAGCATTGGTAAGAGCTC 628
                       **    *  *******  ** ************* ***********  * **********

consensus_11401#0      AAGCTCGTGTCAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGA 718
consensus_11401#1      AAGCTCGTGTCAGAGCAAGACGAGTTCGAATTTCTTTGGAAAGTCAAGTGACGCAAAAGA 688
                       ********************* ******  ******* ** *  *****  * *  ****

consensus_11401#0      AGGTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGAACGCTGGTGTG 778
consensus_11401#1      AGGCTTCAGAACAGAATGTTCACGAGGACCATGTTTGGGAAATTGAGGAACGCTGGTGTG 748
                       ***   * *****  *** *** *** * ****** * **********************

consensus_11401#0      GCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTG 838
consensus_11401#1      ACGGTATTGGCTCAGCGGAACAAATGCAAGCTAAAGTATTAAAAAGACAGGAAGCTGCTG 808
                        * ******* ** *  *** ** **************** ***** *************

consensus_11401#0      CTAAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGC 898
consensus_11401#1      CTAAGCGGGAAAGAGCAATGGCATACGCTTTAACACACCAGTGGCAAGCAGGTTCCAGGA 868
                       ******* ** ************** ***** ** ** *** * *************** 

consensus_11401#0      AACAGAAACCTACAACTCCGCAAGGACTTGAACTTGATGACAGCCACTGGGGATCAAACT 958
consensus_11401#1      AACAGAAAGCAGCAACCCTCCAAGGGCTTGAGGTGGATGAGAATCAGTGGAGCCAGAATT 928
                       ******** *  **** *  ***** *****  * ***** *  ** *** *    ** *

consensus_11401#0      GGTTAGAGAGGTGGATGGCTGTACGTCCATGGGAGAACAGGTTGCTTGACAGTAACACCA 1018
consensus_11401#1      GGTTAGAGAGGTGGATGGCTGCACGCCCATGGGAGAACAGGTTGCTTGATACTAATGCCA 988
                       ********************* *** *********************** * ***  ***

consensus_11401#0      AAGAAACTATGCCACTGTGTGATGATAAGCAGGAT-ATGGAAACAAAGTC-----TCAGA 1072
consensus_11401#1      AAGAGAGTGCTCCAACTGGTGATGATAACCATGCTGATGAAAATGAGGCCAAGGCTCCGA 1048
                       **** * *   ***    ********** ** * * *** ***  * * *     ** **

consensus_11401#0      TCACACCAAAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGA 1132
consensus_11401#1      ACAAACCAAAAGGAAAAGTGTCCATTTCTACCACTCATCCGAATGGCTCAAACAAGAAGA 1108
                        ** ****** ** *****     **** *   * * * * ***** ** **********

consensus_11401#0      AAGGCATAAACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGC 1192
consensus_11401#1      ACGGTGCAAATCATAAGAAGTCGCATTCCGATATAAGTGGCTCTTCATCAGGGCAATCTG 1168
                       * **   *** ***** ** **  **** *** *** * *  ******  ** *  **  

consensus_11401#0      CAAATATACCTTCAACA---TCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATG 1249
consensus_11401#1      CAGGTGTTCTGCCCACAAATTCTTTGGGATCATCCAAGCTAAAACCAAA----------- 1217
                       **  * * *   * ***   ************* *** * ***  ****           

consensus_11401#0      AAGCTTTGGAAGAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAAC 1309
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      CAAAAGCCAAGCTTGTGCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTA 1369
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      ATGTTGGTGGGGGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCA 1429
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      GTGCCAAGTCTGATCCAAAACCACGGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTG 1489
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      AGTTGCAGGCCTGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATT 1549
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      TGCTGTCCTCCAGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAAT 1609
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      ACTGTATCTTAGATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGTGCACGGTTGTGGG 1669
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      TATGTCGTGCCATATTTTTCTTTTGCATTTCCATCAGTTTTTTTACCCTCTTGTATGTTG 1729
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      TTGTGAGTTTTGAAAGAAGGAACTATGTTATGTCTGAAAAGTGTGGTCCTGTGCAGCATT 1789
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      GCAGCTGTCTTTCTTTCCTTATAAATTCAAATCTGCCCCTTCTTTATTGTTAAAAAAAAA 1849
consensus_11401#1      ------------------------------------------------------------
                                                                                   

consensus_11401#0      AAAAAAAAAA 1859
consensus_11401#1      ----------
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)