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Oryza sativa
cluster # 11403 cluster # 11403       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11403#0 length = 2086 sequences # 7  
consensus_11403#1 length = 601 sequences # 1  
consensus_11403#2 length = 147 sequences # 1  

consensusID : consensus_11403#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2086
fasta sequence
                              [GGCCACTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCTCCGGAGCCTTCCCGTCTCGGCGGCGGCCACGCGTTCGTCGACCGGCGCCTATGGGGGCAATCACCTCGGCCGAGCTCAACTTCCTCATCTTCCGGTATCTCCAGGAGTCCGGTTTCATTCATGCCGCATTCACATTAGGGTATGAAGCAGGGATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTTATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAATGATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAGGTTAAGGCTGAAGAAGATTCTCTTGCTGGTGGAGGTCCCACACCAATGGATGTAAGCACAACTGCTCATGAAATTTCTAGTGCTGATGTGACTGTTTTGGAAGGACACAGCTCAGAGGTGTTCGCTTGTGCATGGAGTCCAGCTGGTTCCCTTCTAGCGTCTGGGTCAGGAGACTCGACAGCTAGAATCTGGACAATTCCAGATGGACCATGTGGTTCCATCACACAATCATCTCCTCCAGGTGTTCATGTTTTGAAACATTTTAAGGGTCGAACTAATGAGAAGAGCAAGGATGTCACCACACTTGACTGGAATGGGGAAGGAACTCTATTGGCTACTGGTTCCTATGATGGGCAGGCAAGAATATGGAATAGCGATGGAGAGTTGAAGCAGACTTTGTTCAAACACAAGGGACCTATATTTTCCTTGAAATGGAATAAGAAAGGAGATTTCCTCCTAAGTGGAAGTGTTGATAAAACTGCTATTGTGTGGGATACAAAGACATGGGAGTGTAAGCAGCAATTTGAATTTCATTCAGCTCCAACACTGGATGTTGACTGGAGAAACAATAATTCTTTTGCAACATGCTCAACTGATAATATGATCTATGTTTGCAAGATTGGGGATCAGCGCCCAGTTAAATCCTTCAGTGGTCATCAGAGTGAAGTTAATGCTATCAAGTGGGATCCAACTGGTTCTCTGCTGGCTTCATGTTCAGATGATTGGACTGCTAAGATATGGAGTATGAAGCAGGATAAATGTGTTTATGATTTTAAGGAGCATACTAAGGAAATATACACTATTAGATGGAGCCCAACAGGACCAGGAACAAATAATCCCAATCAACAGTTGCTTTTGGCAAGTGCCTCTTTTGATTCGACTATCAAGCTATGGGAAGTTGAGCAAGGACGCC-TTCTGTACAGCTTGGCTGGCCACAGGCAACCTGTGTATTCGGTCGCATTTAGCCCTGGTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAGTCTGTCTCATGGATTTCAGGATGTAGTTTAAACCA-GTGGATGGATGAAGTAATACAAGCAGATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTCTAGGTTTTAGGTACCTTTAGTTTGCCAGTGCTTGT-ACAGTTATTTCCTTGCGGAGAAACTGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTCGCAATGCTCATCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATCTTTGTCATTACCATAACAAATGCTTAATTGCTATGGTACCAAAAGATTGAGTTGCTAAAAAAAC]

[+] EMBL AK111882             [GGCCACTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCTCCGGAGCCTTCCCGTCTCGGCGGCGGCCACGCGTTCGTCGACCGGCGCCTATGGGGGCAATCACCTCGGCCGAGCTCAACTTCCTCATCTTCCGGTATCTCCAGGAGTCCGGTTTCATTCATGCCGCATTCACATTAGGGTATGAAGCAGGGATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTTATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAATGATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAGGTTAAGGCTGAAGAAGATTCTCTTGCTGGTGGAGGTCCCACACCAATGGATGTAAGCACAACTGCTCATGAAATTTCTAGTGCTGATGTGACTGTTTTGGAAGGACACAGCTCAGAGGTGTTCGCTTGTGCATGGAGTCCAGCTGGTTCCCTTCTAGCGTCTGGGTCAGGAGACTCGACAGCTAGAATCTGGACAATTCCAGATGGACCATGTGGTTCCATCACACAATCATCTCCTCCAGGTGTTCATGTTTTGAAACATTTTAAGGGTCGAACTAATGAGAAGAGCAAGGATGTCACCACACTTGACTGGAATGGGGAAGGAACTCTATTGGCTACTGGTTCCTATGATGGGCAGGCAAGAATATGGAATAGCGATGGAGAGTTGAAGCAGACTTTGTTCAAACACAAGGGACCTATATTTTCCTTGAAATGGAATAAGAAAGGAGATTTCCTCCTAAGTGGAAGTGTTGATAAAACTGCTATTGTGTGGGATACAAAGACATGGGAGTGTAAGCAGCAATTTGAATTTCATTCAGCTCCAACACTGGATGTTGACTGGAGAAACAATAATTCTTTTGCAACATGCTCAACTGATAATATGATCTATGTTTGCAAGATTGGGGATCAGCGCCCAGTTAAATCCTTCAGTGGTCATCAGAGTGAAGTTAATGCTATCAAGTGGGATCCAACTGGTTCTCTGCTGGCTTCATGTTCAGATGATTGGACTGCTAAGATATGGAGTATGAAGCAGGATAAATGTGTTTATGATTTTAAGGAGCATACTAAGGAAATATACACTATTAGATGGAGCCCAACAGGACCAGGAACAAATAATCCCAATCAACAGTTGCTTTTGGCAAGTGCCTCTTTTGATTCGACTATCAAGCTATGGGAAGTTGAGCAAGGACGCC TTCTGTACAGCTTGGCTGGCCACAGGCAACCTGTGTATTCGGTCGCATTTAGCCCTGGTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAGTCTGTCTCATGGATTTCAGGATGTAGTTTAAACCA GTGGATGGATGAAGTAATACAAGCAGATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTCTAGGTTTTAGGTACCTTTAGTTTGCCAGTGCTTGT ACAGTTATTTCCTTGCGGAGAAACTGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTCGCAATGCTCATCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATCTTTGTCATTACCATAACAAATGCTTAATTGCTATGGTAC                         ]
[+] EMBL CB636793             [                       CCCCTCTCCCCTCTCCTCCGGAGCCTTCCCGTCTCGGCGGCGGCCACGCGTTCGTCGACCGGCGCCTATGGGGGCAATCACCTCGGCCGAGCTCAACTTCCTCATCTTCCGGTATCTCCAGGAGTCCGGTTTCATTCATGCCGCATTCACATTAGGGTATGAAGTAGGGATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTTATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAATGATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAGGTTAAGGCTGAAGAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB637255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAACAGGACCAGGAACAAATAATCCCAATCAACAGTTGCTTTTGGCAAGTGCCTCTTTTGATTCGACTATCAAGCTATGGGAAGTTGAGCAAGGACGCC TTCTGTACAGCTTGGCTGGCCACAGGCAACCTGTGTATTCGGTCGCATTTAGCCCTGGTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAGTCTGTCTCATGGATTTCAGGATGTAGTTTAAACCA GTGGATGGATGAAGTAATACAAGCAGATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTCTAGGTTTTAGGTACCTTTAGTTTGCCAGTGCTTGT ACAGTTATTTCCTTGCGGAGAAACTGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTCGCAATGCTCATCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATCTTTGTCATTACCATAA                                                ]
[+] EMBL BM421668             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              actaATGGGAA TTGACCAAGGACCCCTTTCTG CCA CTT GCTGCCCACAGCCAACCTGTGTATTCGTTCGCATTTACCCCT GTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACATCCAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGCCAGCAAGATTGCAGCATGTTTCTCGAAC ACACAGTCTGTCTCATGGATTTCAGGATGTAGTTTCAACCACGTGGATGGATGAAGTAATACAAGCAGATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATT CCTTAACTCTAGGTTTTAGGTACCTTTAGTTTGCCAGTGCTTGTCACAGTTATTTCCTTGCGGAGAAACTGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTC CAATGCTCATCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATCTTTGTCATTACCATCACCNATGCTTAATTGCTATGGTACCAAAA                    ]
[-] EMBL CB636794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTTGTGTATTCGGTCGCATTTAGCCCTGGTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAGTCTGTCTCATGGATTTCAGGATGTAGTTTAAACCA GTGGATGGATGAAGTAATACAAGCAGATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTCTAGGTTTTAGGAACAAAAAGTTTGCCAGTGCTTGT ACAGTTATTTCCTTGCGGAGAAACTGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTCGCAATGCTCATCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTA AATAGTCATTACCATA                                                 ]
[-] EMBL CF325627             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGGTCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAGTCTGTCTCATGGATTTCAGGATGTAGTTTAAACCA GTGGATGGATGAAGTAATACAAGCAGATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTCTAGGTTTTAGGTACCTTTAGTTTGCCAGTGCTTGT ACAGTTATTTCCTCGCGGAGAAACTGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTCGCAATGCTCATCGTATTTAGTAATATATTAGTATCAATTGTTTATTCGAGATTATCTTTGTCATTACCATAACAAATGCTTAATTGATATGGTACCATTTGATTGAGTTGCTAAAAAAAC]
[-] EMBL CB637856             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGTTAAAGAAGGGAGGATTTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTGTGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTTTCGAACAACACAGTCTGTTTCATGGATTTCAGGATGTAGTTTAAACCA GTGGATGGATTAAGTAATACAAGCATATGCTTGGCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTTTAGGTTTTAGGGACCTTTAGTTTGCCAGTGCTTGT ACAGTTATTTCCTTGAGGAGAAACTGACCATAGGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTTTTCGCAATGCTCATCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATTTTTGTCATTA                                                      ]


>consensus_11403#0 GGCCACTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCTCCGGAGCCTTCCCGTCTCGG CGGCGGCCACGCGTTCGTCGACCGGCGCCTATGGGGGCAATCACCTCGGCCGAGCTCAAC TTCCTCATCTTCCGGTATCTCCAGGAGTCCGGTTTCATTCATGCCGCATTCACATTAGGG TATGAAGCAGGGATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTT ATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAAT GATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAAT GTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGT GACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGT GAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCT GAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAG GTTAAGGCTGAAGAAGATTCTCTTGCTGGTGGAGGTCCCACACCAATGGATGTAAGCACA ACTGCTCATGAAATTTCTAGTGCTGATGTGACTGTTTTGGAAGGACACAGCTCAGAGGTG TTCGCTTGTGCATGGAGTCCAGCTGGTTCCCTTCTAGCGTCTGGGTCAGGAGACTCGACA GCTAGAATCTGGACAATTCCAGATGGACCATGTGGTTCCATCACACAATCATCTCCTCCA GGTGTTCATGTTTTGAAACATTTTAAGGGTCGAACTAATGAGAAGAGCAAGGATGTCACC ACACTTGACTGGAATGGGGAAGGAACTCTATTGGCTACTGGTTCCTATGATGGGCAGGCA AGAATATGGAATAGCGATGGAGAGTTGAAGCAGACTTTGTTCAAACACAAGGGACCTATA TTTTCCTTGAAATGGAATAAGAAAGGAGATTTCCTCCTAAGTGGAAGTGTTGATAAAACT GCTATTGTGTGGGATACAAAGACATGGGAGTGTAAGCAGCAATTTGAATTTCATTCAGCT CCAACACTGGATGTTGACTGGAGAAACAATAATTCTTTTGCAACATGCTCAACTGATAAT ATGATCTATGTTTGCAAGATTGGGGATCAGCGCCCAGTTAAATCCTTCAGTGGTCATCAG AGTGAAGTTAATGCTATCAAGTGGGATCCAACTGGTTCTCTGCTGGCTTCATGTTCAGAT GATTGGACTGCTAAGATATGGAGTATGAAGCAGGATAAATGTGTTTATGATTTTAAGGAG CATACTAAGGAAATATACACTATTAGATGGAGCCCAACAGGACCAGGAACAAATAATCCC AATCAACAGTTGCTTTTGGCAAGTGCCTCTTTTGATTCGACTATCAAGCTATGGGAAGTT GAGCAAGGACGCCTTCTGTACAGCTTGGCTGGCCACAGGCAACCTGTGTATTCGGTCGCA TTTAGCCCTGGTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGG TCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTG TGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAGTCTGTCTC ATGGATTTCAGGATGTAGTTTAAACCAGTGGATGGATGAAGTAATACAAGCAGATGCTTG GCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTCTAGGTTT TAGGTACCTTTAGTTTGCCAGTGCTTGTACAGTTATTTCCTTGCGGAGAAACTGACCATA GGATATAGTTATGTGTAGAGCGAAATCTTTCCAACATCATGTCTTCGCAATGCTCATCGT ATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATCTTTGTCATTACCATAACA AATGCTTAATTGCTATGGTACCAAAAGATTGAGTTGCTAAAAAAAC



consensusID : consensus_11403#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 601
fasta sequence
                              [GATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTTATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAATGATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAGGTTAAGGCTCTAAGAAGATTCTCTTGCTGGTGGAGGTGGCAAATAATCAATTAGCTTCTCTGGAGTGACATATCCTAGAGCCCGTGACTTATGGGTGGTGTATGATCAATTATCCCTGCCAAAAACTCCATAATATCCTTGTGGTCCCACACCAATGGATGTAAGCACAACTGCTCATGAAATTTCTAGTGC]

[+] EMBL CB637254             [GATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTTATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAATGATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAGGTTAAGGCTCTAAGAAGATTCTCTTGCTGGTGGAGGTGGCAAATAATCAATTAGCTTCTCTGGAGTGACATATCCTAGAGCCCGTGACTTATGGGTGGTGTATGATCAATTATCCCTGCCAAAAACTCCATAATATCCTTGTGGTCCCACACCAATGGATGTAAGCACAACTGCTCATGAAATTTCTAGTGC]


>consensus_11403#1 GATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTTATCACTATCGT GCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAATGATGAAGATCT TGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAATGTTGAAGAGTT GCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGTGACAAGGACAA GGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGTGAACGGGAGAG GGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCTGAAAGAGACAG GGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAGGTTAAGGCTCT AAGAAGATTCTCTTGCTGGTGGAGGTGGCAAATAATCAATTAGCTTCTCTGGAGTGACAT ATCCTAGAGCCCGTGACTTATGGGTGGTGTATGATCAATTATCCCTGCCAAAAACTCCAT AATATCCTTGTGGTCCCACACCAATGGATGTAAGCACAACTGCTCATGAAATTTCTAGTG C



consensusID : consensus_11403#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 147
fasta sequence
                              [GTAGTTATGTTTAGAGCGAAATCGTGTTCCAACAGTCATGTCTTCGCAANGCTCANCGTATTGAGTACTATATTAGTAACATTGGTGTATNCGAGATTATCTTTGTCATTACCATAACAAATGCTNAATTGCTANGGTACCATTTGA]

[+] EMBL BI807202             [GTAGTTATGTTTAGAGCGAAATCGTGTTCCAACAGTCATGTCTTCGCAANGCTCANCGTATTGAGTACTATATTAGTAACATTGGTGTATNCGAGATTATCTTTGTCATTACCATAACAAATGCTNAATTGCTANGGTACCATTTGA]


>consensus_11403#2 GTAGTTATGTTTAGAGCGAAATCGTGTTCCAACAGTCATGTCTTCGCAANGCTCANCGTA TTGAGTACTATATTAGTAACATTGGTGTATNCGAGATTATCTTTGTCATTACCATAACAA ATGCTNAATTGCTANGGTACCATTTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11403#0      GGCCACTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCTCCGGAGCCTTCCCGTCTCGG 60
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      CGGCGGCCACGCGTTCGTCGACCGGCGCCTATGGGGGCAATCACCTCGGCCGAGCTCAAC 120
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TTCCTCATCTTCCGGTATCTCCAGGAGTCCGGTTTCATTCATGCCGCATTCACATTAGGG 180
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TATGAAGCAGGGATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGCTCTT 240
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      ATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGAAAAT 300
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCTCTTGAAATAATCACAAAAAAT 360
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAGTGACCGT 420
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCCTGGGGGT 480
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGACAGAGCT 540
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTATTGATAAG 600
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GTTAAGGCTGAAGAAGATTCTCTTGCTGGTGGAGGTCCCACACCAATGGATGTAAGCACA 660
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      ACTGCTCATGAAATTTCTAGTGCTGATGTGACTGTTTTGGAAGGACACAGCTCAGAGGTG 720
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TTCGCTTGTGCATGGAGTCCAGCTGGTTCCCTTCTAGCGTCTGGGTCAGGAGACTCGACA 780
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GCTAGAATCTGGACAATTCCAGATGGACCATGTGGTTCCATCACACAATCATCTCCTCCA 840
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GGTGTTCATGTTTTGAAACATTTTAAGGGTCGAACTAATGAGAAGAGCAAGGATGTCACC 900
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      ACACTTGACTGGAATGGGGAAGGAACTCTATTGGCTACTGGTTCCTATGATGGGCAGGCA 960
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      AGAATATGGAATAGCGATGGAGAGTTGAAGCAGACTTTGTTCAAACACAAGGGACCTATA 1020
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TTTTCCTTGAAATGGAATAAGAAAGGAGATTTCCTCCTAAGTGGAAGTGTTGATAAAACT 1080
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GCTATTGTGTGGGATACAAAGACATGGGAGTGTAAGCAGCAATTTGAATTTCATTCAGCT 1140
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      CCAACACTGGATGTTGACTGGAGAAACAATAATTCTTTTGCAACATGCTCAACTGATAAT 1200
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      ATGATCTATGTTTGCAAGATTGGGGATCAGCGCCCAGTTAAATCCTTCAGTGGTCATCAG 1260
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      AGTGAAGTTAATGCTATCAAGTGGGATCCAACTGGTTCTCTGCTGGCTTCATGTTCAGAT 1320
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GATTGGACTGCTAAGATATGGAGTATGAAGCAGGATAAATGTGTTTATGATTTTAAGGAG 1380
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      CATACTAAGGAAATATACACTATTAGATGGAGCCCAACAGGACCAGGAACAAATAATCCC 1440
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      AATCAACAGTTGCTTTTGGCAAGTGCCTCTTTTGATTCGACTATCAAGCTATGGGAAGTT 1500
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GAGCAAGGACGCCTTCTGTACAGCTTGGCTGGCCACAGGCAACCTGTGTATTCGGTCGCA 1560
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TTTAGCCCTGGTGGTGAGTACTTAGCAAGTGGTTCCCTTGATCAATGCCTACACATATGG 1620
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TCCGTTAAAGAAGGGAGGATCTTGAAGACATACAGAGGGAGTGGTGGCATTTTTGAAGTG 1680
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TGCTGGAATAAAGAAGGCAGCAAGATTGCAGCATGTTTCTCGAACAACACAGTCTGTCTC 1740
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      ATGGATTTCAGGATGTAGTTTAAACCAGTGGATGGATGAAGTAATACAAGCAGATGCTTG 1800
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      GCTATCTGTTCTTCCGTGATCAGCTGGGGAGAACAGGATTATTGCCTTAACTCTAGGTTT 1860
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ------------------------------------------------------------
                                                                                   

consensus_11403#0      TAGGTACCTTTAGTTTGCCAGTGCTTGTACAGTTATTTCCTTGCGGAGAAACTGACCATA 1920
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      ---------------GATCCATAAGGGTGGGATTGATGGAAATCTAGTTCCACCTGGTGC 45
                                                                                   

consensus_11403#0      GGATATAGTTAT-GTGTAGAGCGAAATCTT--TCCAACA-TCATGTCTTCGCAATGCTCA 1976
consensus_11403#2      ----GTAGTTAT-GTTTAGAGCGAAATCGTGTTCCAACAGTCATGTCTTCGCAANGCTCA 55
consensus_11403#1      TCTTATCACTATCGTGCAGAAAGGCCTCCAATACATAGAACTAGAAGCAAATACGGATGA 105
                            *   *** **  ***  *   **     *  * *   *         *  * * *

consensus_11403#0      TCGTATTTAGTACTATATTAGTAACAATTGTTTATTCGAGATTATCTTTGTCATTACCAT 2036
consensus_11403#2      NCGTATTGAGTACTATATTAGTAACATTGGTGTATNCGAGATTATCTTTGTCATTACCAT 115
consensus_11403#1      AAATGATGAAGATCTTGCGAAGGATTTTGCCCTTCTTGAACCT---CTTGAAATAATCAC 162
                          *  * *  *   *   *   *   *    *    **   *    ***  ** * ** 

consensus_11403#0      AACAAATGCTTAATTGCTATGGTACCAAAAGATTGAGTTGCTAAAAAAAC---------- 2086
consensus_11403#2      AACAAATGCTNAATTGCTANGGTACCATTTGA---------------------------- 147
consensus_11403#1      AAAAAATGTTGAAGAGTTGCAACAGATTGTTAAGAAAAGGAAAAGGGAGAAGACTCAAAG 222
                       ** ***** * **  * *     *       *                            

consensus_11403#0      ------------------------------------------------------------
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      TGACCGTGACAAGGACAAGGGAAAAGAAAAGGAACGTATGGAGGAGCATGAACGACGCCC 282
                                                                                   

consensus_11403#0      ------------------------------------------------------------
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      TGGGGGTGAACGGGAGAGGGAGCGCCATGACCAAGAAAAAGAGTTAGAGAAGGAGAAAGA 342
                                                                                   

consensus_11403#0      ------------------------------------------------------------
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      CAGAGCTGAAAGAGACAGGGATCAAGATAAAGAGAAAGAAAAGCTGCACACAGAGCGTAT 402
                                                                                   

consensus_11403#0      ------------------------------------------------------------
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      TGATAAGGTTAAGGCTCTAAGAAGATTCTCTTGCTGGTGGAGGTGGCAAATAATCAATTA 462
                                                                                   

consensus_11403#0      ------------------------------------------------------------
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      GCTTCTCTGGAGTGACATATCCTAGAGCCCGTGACTTATGGGTGGTGTATGATCAATTAT 522
                                                                                   

consensus_11403#0      ------------------------------------------------------------
consensus_11403#2      ------------------------------------------------------------
consensus_11403#1      CCCTGCCAAAAACTCCATAATATCCTTGTGGTCCCACACCAATGGATGTAAGCACAACTG 582
                                                                                   

consensus_11403#0      -------------------
consensus_11403#2      -------------------
consensus_11403#1      CTCATGAAATTTCTAGTGC 601
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)