These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11404#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2205 fasta sequence [TCGCCGAGACGAGGTGTTCCGATTTTGACTTGCTACCGGAATCCTCGCTGAAAGCAAAACCCCCATCTCCCGCGGCTTCTCGTCGGCCGCCGCCGCGGTCGCTCGCCGTCGCCGATGAGATCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCCACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGAGGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGAGGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTGGTGCAAGGACTGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGCGGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGGCGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGACCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACACGCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACGTTGATGAGTTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATGGCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTTATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATATTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTATTATAAAAAAAGGA] [+] EMBL AK103588 [TCGCCGAGACGAGGTGTTCCGATTTTGACTTGCTACCGGAATCCTCGCTGAAAGCAAAACCCCCATCTCCCGCGGCTTCTCGTCGGCCGCCGCCGCGGTCGCTCGCCGTCGCCGATGAGATCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCCACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGAGGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGAGGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTGGTGCAAGGACTGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGCGGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGGCGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGACCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACACGCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACGTTGATGAGTTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATGGCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTTATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATATTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTA ] [+] EMBL CB631615 [ TCGCCGATGAGATCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCCACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGAGGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGAGGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTGGTGCAAGGACCCCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGCGGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGGCGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGACCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACACGCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGGCATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCCACAGCTTTGGCTACTGCTCT ] [+] EMBL CB666171 [ AATCCCCTTA GTTGATGAGTTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATGGCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTTATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTG ] [-] EMBL CB666172 [ TTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATATTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTATTATAAAAAAAGGA] consensusID : consensus_11404#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 885 fasta sequence [CGAGACAAGGGGGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTGAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGGTATATTTGATAATACTTTTTCCTCCACTTAAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTANTTGGCACGTGCGCGGNANAATAGCATGAGACACCTTTTTTCTTCGATAGGAAAAAACATTGGTTATATGNAGCAAAGGTGGAATTAAGGATTTTCNTTTACTTTTAGCTAAATTTACTGNCTANAAANGGGGAAAATTACATGATAGNAG] [+] EMBL CA766911 [CGAGACAAGGGGGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTGAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGGTATATTTGATAATACTTTTTCCTCCACTTAAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTANTTGGCACGTGCGCGGNANAATAGCATGAGACACCTTTTTTCTTCGATAGGAAAAAACATTGGTTATATGNAGCAAAGGTGGAATTAAGGATTTTCNTTTACTTTTAGCTAAATTTACTGNCTANAAANGGGGAAAATTACATGATAGNAG] [+] EMBL BI812560 [ ATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAAC ATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCC AAGAAAGATTTTCATGTCAAC AAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATAC TTTTCCTCCCCTT AGGAATTTGCTAATGCTTTCTTTAAaaaaaaaa ] consensusID : consensus_11404#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 779 fasta sequence [TGGCACGTCAGCTCTTTGTGTGAGAGGGTATAAAGCAATAATTAGCAAGCATTTAGCATCTCTGTTTGCTATGTAACTAGAAGCAAAATTTTATTTTCTAATGCATCCGTGTCGAGTGAACAATATTTCCTCATTCTTCTCCCATGATATGCGAAGGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACA-AAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGT-GCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATGTTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAGTAGAATTCTTTTCCCT] [-] EMBL CB631616 [TGGCACGTCAGCTCTTTGTGTGAGAGGGTATAAAGCAATAATTAGCAAGCATTTAGCATCTCTGTTTGCTATGTAACTAGAAGCAAAATTTTATTTTCTAATGCATCCGTGTCGAGTGAACAATATTTCCTCATTCTTCTCCCATGATATGCGAAGGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACA AAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGT GCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATGTTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAGTAGAATTCTTTTCCCT] [+] EMBL BQ908365 [ CGCCAAAGAAAGATTTTCATGTCAACANAAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATGTTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCAAAAAAA ] consensusID : consensus_11404#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence [ACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGGTTTAATACTTTGTTCTTTAATAGTTTGTCTTACTACTGTTATGATTCAAAGTTGATGATTGGGCATGTCACTATGTCCTCTTAATTATATACAGCTATTTTATATTTTAATTTCCATTGATGTACTGACTGTACTTTCTTTTTTGTTATTCTCTTATGTGTCTATGG] [+] EMBL CF306737 [ACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGGTTTAATACTTTGTTCTTTAATAGTTTGTCTTACTACTGTTATGATTCAAAGTTGATGATTGGGCATGTCACTATGTCCTCTTAATTATATACAGCTATTTTATATTTTAATTTCCATTGATGTACTGACTGTACTTTCTTTTTTGTTATTCTCTTATGTGTCTATGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 TCGCCGAGACGAGGTGTTCCGATTTTGACTTGCTACCGGAATCCTCGCTGAAAGCAAAAC 60 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 CCCCATCTCCCGCGGCTTCTCGTCGGCCGCCGCCGCGGTCGCTCGCCGTCGCCGATGAGA 120 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 TCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCC 180 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 ACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGA 240 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGA 300 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTG 360 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GTGCAAGGACTGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGC 420 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGG 480 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 CGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGA 540 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 CCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACAC 600 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTT 660 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 CCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGT 720 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGA 780 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 TTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAA 840 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 CATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAAT 900 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 TTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGG 960 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 AATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAA 1020 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 TCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCAT 1080 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACGTTGATGAG 1140 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 TTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATG 1200 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------------------------------------------ consensus_11404#2 ------------------------------------------------------------ consensus_11404#0 GCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTT 1260 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 ------------------------CGAGACAAGGGGGGTTTTGACAGAATATGTTCTGGT 36 consensus_11404#2 --------------------------------------------------------TGGC 4 consensus_11404#0 ATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGT 1320 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 TTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTAT 96 consensus_11404#2 ACGT-CAGCTCTTTGTGTGAGAGGGTATAAAGCAATAATT----AGCAAGCATTTAGCAT 59 consensus_11404#0 TTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTAT 1380 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 TT-TGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTGAAGGGGCTTGGGCTGG 155 consensus_11404#2 CTCTGTTTGCTATG--TAACTAGAAGCAAAATTTTATTT--TCTAATGCATCCGTGTCGA 115 consensus_11404#0 TT-TGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGG 1439 consensus_11404#3 ---------------------------ACATGTGGAAGTTCCCAGCGCCATTCCTGATGA 33 * * * * * * * consensus_11404#1 GAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAA--GTATCATAGGTTCAAGAA 213 consensus_11404#2 GTG-AACAATATTTCCTCATTCTTCTCCCATGATATGCGAAGGTATCATAGGTTCAAGAA 174 consensus_11404#0 GAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAA--GTATCATAGGTTCAAGAA 1497 consensus_11404#3 ACACGGTG-CATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCAC 92 **** * * ** * * ** * consensus_11404#1 AGGCCATCGTAATAAG-AATTGTGACAAGAACCCCCAAA-----CTTCTAGCGGTGCTTC 267 consensus_11404#2 AGGCCATCGTAATAAG-AATTGTGACAAGAACCCCCAAA-----CTTCTAGCGGTGCTTC 228 consensus_11404#0 AGGCCATCGTAATAAG-AATTGTGACAAGAACCCCCAAA-----CTTCTAGCGGTGCTTC 1551 consensus_11404#3 CGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTC 152 ** * * ** * *** ** * * *** *** ** consensus_11404#1 AAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCA 327 consensus_11404#2 AAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCA 288 consensus_11404#0 AAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCA 1611 consensus_11404#3 CCAACA-GCTTTGGCTACTGCTCTTGACATA-AATTTGAGCAACATTTCACTTGTTTTCA 210 ** * * * * * ** * ** ** ** ** *** ** * *** consensus_11404#1 TCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCC 387 consensus_11404#2 TCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCC 348 consensus_11404#0 TCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCC 1671 consensus_11404#3 TCAC----TGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATT-TTCATTCTTCT 265 *** ** * ***** * * * * * **** * * * ** ** * ** consensus_11404#1 TCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCT 447 consensus_11404#2 TCACAGG----------------------------------------------------- 355 consensus_11404#0 TCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCT 1731 consensus_11404#3 GT---------------------------------------------------------- 267 consensus_11404#1 TTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACA 507 consensus_11404#2 -----------------------GAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACA 392 consensus_11404#0 TTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACA 1791 consensus_11404#3 ---------------------------TTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCT 300 *** ** ** ** * * ** * * consensus_11404#1 TGAACATGACGCAAACAATATT-ATTGATTAAGAAGACACATTTACACAAGCAGCAGACA 566 consensus_11404#2 TGAACATGACGCAAACAATATT-ATTGATTAAGAAGACACATTTACACAAGCAGCAGACA 451 consensus_11404#0 TGAACATGACGCAAACAATATT-ATTGATTAAGAAGACACATTTACACAAGCAGCAGACA 1850 consensus_11404#3 TTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGG---AGTTCTACTAACAGTTGCTA 357 * *** * ** *** * **** ** * * ** ** * *** * * consensus_11404#1 ATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATAT-CTGTCAAGA 625 consensus_11404#2 ATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATAT-CTGTCAAGA 510 consensus_11404#0 ATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATAT-CTGTCAAGA 1909 consensus_11404#3 A----------AGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCT 407 * * *** *** ** ** * * * *** ** * consensus_11404#1 ACTGTGCATAAATAGTATTGGTATATTTGATAATACTTTTTCCTCCACTTAAGGAATTTG 685 consensus_11404#2 ACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTT-CCTCCACTTA-GGAATTTG 568 consensus_11404#0 ACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTT-CCTCCACTTA-GGAATTTG 1967 consensus_11404#3 GTTATGTCTGGTTTCCGCTGGTGCAT--GACACAGATTCT-CCTCCA-------GGTTTA 457 * ** * * ** * ** ** * ** * ****** *** consensus_11404#1 CTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTANTTGGCACGTG 745 consensus_11404#2 CTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATT-GGCACGTG 627 consensus_11404#0 CTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATT-GGCACGTG 2026 consensus_11404#3 ATACTTTGTTCTTTAATAGTTTGTCTT---ACTACTGTTATGATTCAAAGTTGATGATTG 514 ** * ********* * * * * * *** ** * * * ** consensus_11404#1 CGCGGNANAATAGCATGAGACACCTTTTTTCTTCGATAGGAAAAAACATTGGTTATATGN 805 consensus_11404#2 CGCGGAAGAATAGCATGAGACACCTTTTT-CTTCGATAGGAAAATACATTGTTTATATGT 686 consensus_11404#0 CGCGGAAGAATAGCATGAGACACCTTTTT-CTTCGATAGGAAAATACATTGTTTATATGT 2085 consensus_11404#3 ---GGCATGTCACTATG-----TCCTCTTAATTATATACAGCTATTTTATATTTTAATTT 566 ** * * *** * * ** ** *** * * ** ** consensus_11404#1 AGCAAAGGTGGAATTAAGGATTTTCNTTTACTTTTAGCTAAATTTACTGNCTANAAANGG 865 consensus_11404#2 AGCAATGTTGTAATTTATGATTTTCTTT-ACTTTTAGCTAAATTTACTGCATAGAAATGT 745 consensus_11404#0 AGCAATATTGTAATTTATGATTTTCTTT-ACTTTTAGCTAAATTTACTGCATAGAAATGT 2144 consensus_11404#3 C-CATTGATGTACT----GACTGTACTTTCTTTTTTGTTAT-TCTCTTATGTGTCTATGG 620 ** ** * * ** * * ** **** * ** * * * * * * consensus_11404#1 GGAAA-ATTACATGATAGNAG--------------------------------------- 885 consensus_11404#2 GTAAATATTACATGATAGTAGAATTCTTTTCCCT-------------------------- 779 consensus_11404#0 GTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTATTATAAAAAAAGG 2204 consensus_11404#3 ------------------------------------------------------------ consensus_11404#1 - consensus_11404#2 - consensus_11404#0 A 2205 consensus_11404#3 - |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||