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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11405#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1515 fasta sequence
[GCAACTGCATCCACGAACAAAACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTAATTTGGGTGGAGGTGAACAAAAA]
[+] EMBL CB670686 [GCAACTGCATCCACGAACAAAACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTG ]
[+] EMBL AK064777 [ CTGCATCCACGAACAAAACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGA GAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGAGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACAGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATA ]
[+] EMBL CB646146 [ AACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTT ]
[+] EMBL CB679454 [ ATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGNCAGAAGCCATATTTAAG ]
[+] EMBL AK104538 [ AGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTAATTTG ]
[+] EMBL AK060919 [ AGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTAATTTG ]
[-] EMBL CB679455 [ ACNTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTAGGGGGTCTATGCCAAAGGATTCG ]
[-] EMBL CB646147 [ GGGGTGGCCATGGTTTTTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTATTTTAGGTGGAGGTG ]
[-] EMBL CB670687 [ TGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTTGAGGCGATGGCCACGTTCGTCGGCCAGGTTTTGGTGATCTCCCTCATCGCGCTTTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCCCCGGGCTGCTGTTGATTTCCATGGGCATCGTGCTGAAGCTTTTGCTGGAGAACAAGGAGAACGTTCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGATGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGGCAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTTTTTCATGTAATGTTTTGCTGTTGCGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAAGTACAGATTAATTTGGTTGGAGGTGAACAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||