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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11424 cluster # 11424       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11424#0 length = 595 sequences # 9  

consensusID : consensus_11424#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 595
fasta sequence
                              [ACGAGCCTATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC-CGAGGCGGAGACGAAGGCGATGATCACC-CTCCGCAGCTGCGAGGGC-CAGGTGTTCGAGGTCGCGGAGGCC-GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGGCGGGGCGGCCGCCGCCGCCGACGGCGACGCCCCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACGTTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCCGAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTCGAATGAAGACCCCCCCCCCCCCCCCC]

[+] EMBL BP184895             [ACGAGGCTATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGGCGGGGCGGCCGCCGCCGCCGACGGCGACGCCCCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACGTTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCCGAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTCGAATGAAGACCCCCCCCCCCCCCCCC]
[+] EMBL AU082411             [     CCGATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGG                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU082412             [     CCGATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGAAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGC                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BI799594             [   aatCTATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGC                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI797829             [          TCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGCACGAGGCGGAGACGAAGGCGATGATCACCACTCCGCAGCTGCGAGGGCACAGGTGTTCGAGGTCGCGGAGGCCAGTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGcg                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI798025             [             ATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGC GC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCC ACGTCATCGAGTACTGCAGCAAGCACGTCGAGGCGCG                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C97213               [                       AGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGTTGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGTCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTTGAGGCG                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU082358             [                       AGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGC                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL C99448               [                                                                                                                                                                                                                                                                                                         CCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACGTTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCCGAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTC                          ]


>consensus_11424#0 ACGAGCCTATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGCCGAGG CGGAGACGAAGGCGATGATCACCCTCCGCAGCTGCGAGGGCCAGGTGTTCGAGGTCGCGG AGGCCGTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACA CCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCA GCAAGCACGTCGAGGCGCGCGGCGGGGCGGCCGCCGCCGCCGACGGCGACGCCCCCGCCC CCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACGTTCGACGCCGAGT TCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCAAACTACCTCAACA TCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACAC CAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCCGAGGAAGAAGAGG AGGTGAGGAGGGAGAACCAGTGGGCCTTCGAATGAAGACCCCCCCCCCCCCCCCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)