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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11431#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3743 fasta sequence
[TCTGCACTGCTAGTGTACNTACTCCGTCAATATTTATTTAATAGATTAGATGAGATAAGAGGAGCAAAAGACCCCACTTGCTTAGCCTCCAATCTAACCCCGGAGAACTACTGGAGTATCGCGCGGAGAGCGGAAGAGAGAGCAGAGGCTGTGGAGGCGGAGAGCGGAGAGCGAGCGGACATGGCGGCGGCGGCGGCACCGGCGCCGGCGGAGAGCAATGTGGAGTTCATCCGCGCGCGGAGCGACAAGCGGGAGTACCGCCGGGTGGTGCTCCCCAACGCGCTCGAGTGCCTCCTCATCAGCGACTCCGAAACCGACAAGGCGGCGGCGTGTATGGAGTTTGG-CGTGGGCTCGTTCAGCGACCCGGAGGGGC-TCGAGGGCCTCGCCCACTTCCTCGAGCATATGCTATTTTATGCCAGTGAGAAATACCCTGGGGAACAAGATTACACGAAGTATATCACAGAGCATGGTGGCTCTTGCAATGCCTACACAAGTTCGGAGACAACAAATTTCTA-TTTTGATGTCAATGTGGCCAATTTTGAAGAAGCATTAGACAGATTTGCTCAGTTTTTTATTAAGCCATTGATGTCGCAAGATGCTGTTCTTAGAGAGATTAA-GGCTGTTGATTCTGAACACAAGAAAAACTTGTTGTCTGATGGCT-GGAGAATGTATCAGCTCCAAAAACATCTGGCTTCAAAGGATCACCCCTATCATAAATTCAGTACTGGGAGTTGGGAAACGCTAGAAACAAAACCAAAAGAGAGGGGATTGGACATTAGACAGGAGCTTCTGAAGTTCTATGAGAATTATTCAGCAAACCTGATGCACCTTGTTGTTTATGGAAAGGAGAGCCTGGATTGCATCCAAAGCTTTGTTGAGCGCTTGTTTAGTGACATAAAAAACACTGATCAGAGAAGCTTCAAATGCCCAAGTCAACCTCTTTCAGAGCAGCATATGCAGCTTGTTATCAAAGCAATCCCGATATCTGAAGGCGATTACCTAAAAATATCATGGCCCGTTACACCCAACATCCACTTTTACAAAGAAGGTCCTTCCCGTTATCTGAGTCACTTAATTGGGCATGAAGGCGAGGGATCCATCTTCCATATTATAAAGGAACTAGGATGGGCTATGAATTTGTCGGCCGGGGAGGGCAGTGACAGTGCTCAATACTCCTTTTTTTCAATTAGCATGAGGCTCACCGATGCTGGTCATGAACACATGGAAGACATCATTGGCTTGGTTTTCAAATATATTCTTCTACTAAAAGAAAATGGGATCCATGAGTGGATCTTTGATGAGCTTGTGGCGATAAATGAAACGGAATTCCACTATCAGGACAAAGTCCATCCAATCAGCTATGTGACAGATACTGTCTCAACCATGCGGTTATTCCCACCAGAAGAATGGCTGGTTGGAGCATCACTACCGTCCAAGTATGCTCCAAATAGAATAAATATGATACTTGATGAGTTGTCAGCTGAAAGAGTAAGGATACTGTGGGAATCTAAAAAGTTCAAAGGATCTACTGATTCTGTTGAGCCATGGTATAGTACAGCGTATTCTGTTGAAAATGTTACTCCTTCCATGATACAGCAATGGATTCAAAAAGCTCCTACTGAGAAGCTCTGTATCCCAAAGCCTAACATTTTCATTCCAAAAGATTTATCGCTCAAAGAAGCGCATGAAAAGGTTAAATATCCAGCAATATTGAGAAAGACACCACTTTCACGGTTGTGGTATAAGCCTGACATGCTGTTCTCCACTCCAAAGGTTCACATTATAATTGATTTCCACTGTCCGTTAACAAGCCATTCCCCCGAGGCAGTCATTTCTACGAGTCTCTTTGTTGATTTGTTAGCTGATTACTTGAATGCATATGCGTATGATGCTCAAATTGCTGGTTTATTCTATTCAATATATCGCACTTCTGCTGGATTCCAGGTCTCAGTAGGTGGTTACAATGACAAAATGCGGATTCTGCTAGATGCCATTATGAAGCATATATCTAACTTTGAAGTTAAACCGAACAGGTTTTGTGCCTTGAAGGAAACTGCTGTCAAGGACTACCAAAATTTCAAGTTCAGCCAACCATACTCTCAAGCTTCATACTATCTCTCGTTGATATTGGAGGATCAGAAATGGCCTTTGGCTGAGAAACTTGAGGCTCTTTCTAAGCTTGAACCAGATTCTCTTGCAAAGTTCATGCCACATTTGCTATCGAAGACATTTTTGGAATGCTATATTCATGGGAACATTGAACCAAATGAGGCAACATCTATTGTCCAGGAGATTGAAGATACTATATTCAATACCCCTAATTCTGTGTTCAAATCAATGTCTCCATCACAATATCTGATTAAAAGGGTTATCATGCTTGAAAATGAGTTAAAATGCTACCACCAAATTGAGGGCTTAAATCAGAAGAATGAAAATTCATCAGTGGTCCAATATATTCAGGTTCATCTGGACGATGCCCTTTCAAATATCAAACTTCAACTGTTTGCTTTAATTGCGAGCCAGCCTGCCTTCAACCAGCTGCGAACTGTTGAGCAGCTTGGCTATATAGCAGGTCTTTCTTTAAGATCTGATTGTGGAGTCTGGGCACTCGAGGTTGTTATTCAGTCCACAGTAAAGGATCCTTCACATCTTGATGCTAGGATTGATGAATTCTTCAAGATGTTTGAAAGCAAAATTCATGAATTGTCAGACAAGGATTTTAAGAGGAATGTAAAATCACTTGTCGATTCGAAACTGGAGAAATTCAAAAATTTGTGGGAGGAATCCCACTTCTATTGGGGAGAGATTGAGGCAGGAACTCTCAAGTTTGACAGGGTCGAGTCTGAGGTAGCTCTTCTAAGAGAGCTGAAGAAAGAAGAATTCATCGAATTTTTTGATCAGCATATAAGACTTGGTGCCCCTCAAAGGAAAACTGTAAGCGTGCAAGTCTTCGGCGGCGAACATTTGGCAGAGTTCAAGAAGGCCATTGCTGAAGCTGATACACCCAAAACTTACCGAATCACTGACATATTCGGCTTCAAGCGATCCAGACCTTTGTACCGCTCACTGAAGGGAGGGCCAGGCCGGATCACAATGGACTGACAGCTAGAATTAGTTACACTCTCTTATAGTATTATTCTTTCTCGCGGTGATATATAGCTTGTGTATATGCATGAACTGAATTTTGAC-GGCATTTTAATGGCCGGAGTATACACGATTGCTATTCTTATGGTATGATTCACCAATGCACGTACTTCCGAATGAAATATAACAACTGTAC-AGACTACTAGAGAGTAATGCACAAACTTGTAAAAAAAAAGGACCTTTTGAGTTCTAACAACTATACACTCTGTACAAACACACGAGCAATTGATGCACAAGGAGACGCCCTGAGGGAGCTGAGAATAGCAGTTGTACACTTGTACGCCGGCGAGGCGGCCAGCAGGTGCCACCATCCGCGCACGCGTCACCAGACGGCTTTTGCCTACGGCGCCACGCTCCTGCGGCGGCCAGCGCCCCACTCGTAGCCGCGGCGGTGCCAGCGGCAGCGGAACGACCCGCGGTGCGCCGTGGGCGAGCACACGCAGTAGTGGTGCGGCTGAGCCTGATGAGGCTGCTCCCGCCGCGGCACGGGCGGCGGGGAACCCACTCGCGCCACCGGCGGCGCCCTCCGCCGCTTGACCTCGCACCCCGGCGGCAGAGGCGGCAGCCCAGGATGGCACATGCTCCCTCGCGGCGGAGAT]
[+] EMBL CF306229 [TCTGCACTGCTAGTGTACNTACTCCGTCAATATTTATTTAATAGATTAGATGAGATAAGAGGAGCAAAAGACCCCACTTGCTTAGCCTCCAATCTAACCCCGGAGAACTACTGGAGTATCGCGCGGAGAGCGGAAGAGAGAGCAGAGGCTGTGGAGGCGGAGAGCGGAGAGCGAGCGGACATGGCGGCGGCGGCGGCACCGGCGCCGGCGGAGAGCAATGTGGAGTTCATCCGCGCGCGGAGCGACAAGCGGGAGTACCGCCGGGTGGTGCTCCCCAACGCGCTCGAGTGCCTCCTCATCAGCGACTCCGAAACCGACAAGGCGGCGGCGTGTATGGAGTTTGGCCGTGGGCTCGTTCAGCGACCCGGAGGGGCTTCGAGGGCCTCGCCCACTTCCTCGAGCATATGCTATTTTATGCCAGTGAGAAATACCCTGGGGAACAAGATTACACGAAGTATATCACAGAGCATGGTGGCTCTTGCAATGCCTACACAAGTTCGGAGACAACAAATTTCTATTTTTGATGTCAATGTGGCCAATTTTGAAGAAGCATTAGACAGATTTGCTCAGTTTTTTATTAAGCCATTGATGTCGCAAGATGCTGTTCTTAGAGAGATTAAGGGCTGTTGATTCTGAACACAAGAAAAACTTGTTGTCTGATGGCTGGGAGAATGTATCAGCTCCAAAAACATCTGGCTTCAAAGGATCA ]
[+] EMBL AK100383 [ AAAGACCCCACTTGCTTAGCCTCCAATCTAACCCCGGAGAACTACTGGAGTATCGCGCGGAGAGCGGAAGAGAGAGCAGAGGCTGTGGAGGCGGAGAGCGGAGAGCGAGCGGACATGGCGGCGGCGGCGGCACCGGCGCCGGCGGAGAGCAATGTGGAGTTCATCCGCGCGCGGAGCGACAAGCGGGAGTACCGCCGGGTGGTGCTCCCCAACGCGCTCGAGTGCCTCCTCATCAGCGACTCCGAAACCGACAAGGCGGCGGCGTGTATGGAGGTTGG CGTGGGCTCGTTCAGCGACCCGGAGGGGC TCGAGGGCCTCGCCCACTTCCTCGAGCATATGCTATTTTATGCCAGTGAGAAATACCCTGGGGAACAAGATTACACGAAGTATATCACAGAGCATGGTGGCTCTTGCAATGCCTACACAAGTTCGGAGACAACAAATTTCTA TTTTGATGTCAATGTGGCCAATTTTGAAGAAGCATTAGACAGATTTGCTCAGTTTTTTATTAAGCCATTGATGTCGCAAGATGCTGTTCTTAGAGAGATTAA GGCTGTTGATTCTGAACACAAGAAAAACTTGTTGTCTGATGGCT GGAGAATGTATCAGCTCCAAAAACATCTGGCTTCAAAGGATCACCCCTATCATAAATTCAGTACTGGGAGTTGGGAAACGCTAGAAACAAAACCAAAAGAGAGGGGATTGGACATTAGACAGGAGCTTCTGAAGTTCTATGAGAATTATTCAGCAAACCTGATGCACCTTGTTGTTTATGGAAAGGAGAGCCTGGATTGCATCCAAAGCTTTGTTGAGCGCTTGTTTAGTGACATAAAAAACACTGATCAGAGAAGCTTCAAATGCCCAAGTCAACCTCTTTCAGAGCAGCATATGCAGCTTGTTATCAAAGCAATCCCGATATCTGAAGGCGATTACCTAAAAATATCATGGCCCGTTACACCCAACATCCACTTTTACAAAGAAGGTCCTTCCCGTTATCTGAGTCACTTAATTGGGCATGAAGGCGAGGGATCCATCTTCCATATTATAAAGGAACTAGGATGGGCTATGAATTTGTCGGCCGGGGAGGGCAGTGACAGTGCTCAATACTCCTTTTTTTCAATTAGCATGAGGCTCACCGATGCTGGTCATGAACACATGGAAGACATCATTGGCTTGGTTTTCAAATATATTCTTCTACTAAAAGAAAATGGGATCCATGAGTGGATCTTTGATGAGCTTGTGGCGATAAATGAAACGGAATTCCACTATCAGGACAAAGTCCATCCAATCAGCTATGTGACAGATACTGTCTCAACCATGCGGTTATTCCCACCAGAAGAATGGCTGGTTGGAGCATCACTACCGTCCAAGTATGCTCCAAATAGAATAAATATGATACTTGATGAGTTGTCAGCTGAAAGAGTAAGGATACTGTGGGAATCTAAAAAGTTCAAAGGATCTACTGATTCTGTTGAGCCATGGTATAGTACAGCGTATTCTGTTGAAAATGTTACTCCTTCCATGATACAGCAATGGATTCAAAAAGCTCCTACTGAGAAGCTCTGTATCCCAAAGCCTAACATTTTCATTCCAAAAGATTTATCGCTCAAAGAAGCGCATGAAAAGGTTAAATATCCAGCAATATTGAGAAAGACACCACTTTCACGGTTGTGGTATAAGCCTGACATGCTGTTCTCCACTCCAAAGGTTCACATTATAATTGATTTCCACTGTCCGTTAACAAGCCATTCCCCCGAGGCAGTCATTTCTACGAGTCTCTTTGTTGATTTGTTAGCTGATTACTTGAATGCATATGCGTATGATGCTCAAATTGCTGGTTTATTCTATTCAATATATCGCACTTCTGCTGGATTCCAGGTCTCAGTAGGTGGTTACAATGACAAAATGCGGATTCTGCTAGATGCCATTATGAAGCATATATCTAACTTTGAAGTTAAACCGAACAGGTTTTGTGCCTTGAAGGAAACTGCTGTCAAGGACTACCAAAATTTCAAGTTCAGCCAACCATACTCTCAAGCTTCATACTATCTCTCGTTGATATTGGAGGATCAGAAATGGCCTTTGGCTGAGAAACTTGAGGCTCTTTCTAAGCTTGAACCAGATTCTCTTGCAAAGTTCATGCCACATTTGCTATCGAAGACATTTTTGGAATGCTATATTCATGGGAACATTGAACCAAATGAGGCAACATCTATTGTCCAGGAGATTGAAGATACTATATTCAATACCCCTAATTCTGTGTTCAAATCAATGTCTCCATCACAATATCTGATTAAAAGGGTTATCATGCTTGAAAATGAGTTAAAATGCTACCACCAAATTGAGGGCTTAAATCAGAAGAATGAAAATTCATCAGTGGTCCAATATATTCAGGTTCATCTGGACGATGCCCTTTCAAATATCAAACTTCAACTGTTTGCTTTAATTGCGAGCCAGCCTGCCTTCAACCAGCTGCGAACTGTTGAGCAGCTTGGCTATATAGCAGGTCTTTCTTTAAGATCTGATTGTGGAGTCTGGGCACTCGAGGTTGTTATTCAGTCCACAGTAAAGGATCCTTCACATCTTGATGCTAGGATTGATGAATTCTTCAAGATGTTTGAAAGCAAAATTCATGAATTGTCAGACAAGGATTTTAAGAGGAATGTAAAATCACTTGTCGATTCGAAACTGGAGAAATTCAAAAATTTGTGGGAGGAATCCCACTTCTATTGGGGAGAGATTGAGGCAGGAACTCTCAAGTTTGACAGGGTCGAGTCTGAGGTAGCTCTTCTAAGAGAGCTGAAGAAAGAAGAATTCATCGAATTTTTTGATCAGCATATAAGACTTGGTGCCCCTCAAAGGAAAACTGTAAGCGTGCAAGTCTTCGGCGGCGAACATTTGGCAGAGTTCAAGAAGGCCATTGCTGAAGCTGATACACCCAAAACTTACCGAATCACTGACATATTCGGCTTCAAGCGATCCAGACCTTTGTACCGCTCACTGAAGGGAGGGCCAGGCCGGATCACAATGGACTGACAGCTAGAATTAGTTACACTCTCTTATAGTATTATTCTTTCTCGCGGTGATATATAGCTTGTGTATATGCATGAACTGAATTTTGAC GGCATTTTAATGGCCGGAGTATACACGATTGCTATTCTTATGGTATGATTCACCAATGCACGTACTTCCGAATGAAATATAACAACTGTAC AGACTACTAGAGAGTAATGCACAAACTTG ]
[+] EMBL CB646243 [ GGGAATCTTTAAAGTTCAAAGGATCTACTGATTCTGTTGAGCCATGGTATAGTACAGCGTATTCTGTTGAAAATGTTACTCCTTCCATGATACAGCAATGGATTCAAAAAGCTCCTACTGAGAAGCTCTGTATCCCAAAGCCTAACATTTTCATTCCAAAAGATTTATCGCTCAAAGAAGCGCATGAAAAGGTTAAATATCCAGCAATATTGAGAAAGACACCACTTTCACGGTTGTGGTATAAGCCTGACATGCTGTTCTCCACTCCAAAGGTTCACATTATAATTGATTTCCACTGTCCGTTAACAAGCCATTCCCCCGAGGCAGTCATTTCTACGAGTCTCTTTGTTGATTTGTTAGCTGATTACTTGAATGCATATGCGTATGATGCTCAAATTGCTGGTTTATTCTATTCAATATATCGCACTTCTGCTGGATTCCAGGTCTCAGTAGGTGGTTACAATGACAAAATGCGGATTCTGCTAGATGCCATTATGAAGCATATATCTAACTTTGAAGTTAAACCGAACAGGTTTTGTGCCTTGAAGGAAACTGCTGTCAAGGACTACCAAAATTTCAAGTTCAGCCAACCATACTCTCAAGCTTCATACTATCTCTCGTTGATATTGGAGGATCAGAAATGGCCTTTGGCTGAGAAACTTGAGGCTCTTTCTAAGCTTGAACCAGATTCTCTTGCAAAGTTCATGCCACATTTGCTATCGAAGACATTTTTGGAATGCTATATTCATGGGAACATTGAA CAAATGAGGC ]
[-] EMBL CB630154 [ AGCTTGGCTATATAGCAGGTCTTTCTTTAAGATCTGATTGTGGAGTCTGGGCACTCGAGGTTGTTATTCAGTCCACAGTAAAGGATCCTTCACATCTTGATGCTAGGATTGATGAATTCTTCAAGATGTTTGAAAGCAAAATTCATGAATTGTCAGACAAGGATTTTAAGAGGAATGTAAAATCACTTGTCGATTCGAAACTGGAGAAATTCAAAAATTTGTGGGAGGAATCCCACTTCTATTGGGGAGAGATTGAGGCAGGAACTCTCAAGTTTGACAGGGTCGAGTCTGAGGTAGCTCTTCTAAGAGAGCTGAAGAAAGAAGAATTCATCGAATTTTTTGATCAGCATATAAGAGTTGGTGCCCCTCAAAGGAAAACTGTAAGCGTGCAAGTCTTCGGCGGCGAACATTTGGCAGAGTTCAAGAAGGCCATTGCTGAAGCTGATACACCCAAAACTTACCGAATCACTGACATATTCGGCTTCAAGCGATCCAGACCTTTGTACCGCTCACTGAAGGGAGGGCCAGGCCGGATCACAATGGACTGACAGCTAGAATTAGTT ACTCTCTTATAGTCTTATTCTTTCTCGCGGTGATATATAGCTTGTGTATATGCATGAACTGAATTTTGACGGGCATTTTAATGGCCGGAGTATACACGATTGCTATTCTTATGGTATGATTCACCAATGCACGTACTTCCGAATGAAATGTAACAACTGTGCGAGACTACTAGAGAGTAATGCACAAACTTGTAAAAAAAAAGGA ]
[-] EMBL CB646244 [ GCTTGGCTATATAGCAGGTCTTTCTTTAAGATCTGATTGTGGAGTCTGGGCACTCGAGGTTGTTATTCAGTCCACAGTAAAGGATCCTTCACATCTTGATGCTAGGATTGATGAATTCTTCAAGATGTTTGAAAGCAAAATTCATGAATTGTCAGACAAGGATTTTAAGAGGAATGTAAAATCACTTGTCGATTCGAAACTGGAGAAATTCAAAAATTTGTGGGAGGAATCCCACTTCTATTGGGGAGAGATTGAGGCAGGAACTCTCAAGTTTGACAGGGTCGAGTCTGAGGTAGCTCTTCTAAGAGAGCTGAAGAAAGAAGAATTCATCGAATTTTTTGATCAGCATATAAGACTTGGTGCCCCTCAAAGGAAAACTGTAAGCGTGCAAGTCTTCGGCGGCGAACATTTGGCAGAGTTCAAGAAGGCCATTGCTGAAGCTGATACACCCAAAACTTACCGAATCACTGACATATTCGGCTTCAAGCGATCCAGACCTTTGTACCGCTCACTGAAGGGAGGGCCAGGCCGGATCACAATGGACTGACAGCTAGAATTAGTTACACTCTCTTATAGTATTATTCTTTCTCGCGGTGATATATAGCTTGTGTATATGCATGAACTGAATTTTGAC GGCATTTTAATGGCCGGAGTATACACGATTGCTATTCTTATGGTATGATTCACCAATGCACGTACTTCCGAATGAAATATAACAACTGTAC AGACTACTAGAGAGTAAaaaaaaaaa ]
[-] EMBL CF330951 [ CCCCTCAAAGGAAAACTGTAAGCGTGCAAGTCTTCGGCGGCGAACATTTGGCAGAGTTCAAGAAGGCCATTGCTGAAGCTGATACACCCAAAACTTACCGAATCACTGACATATTCGGCTTCAAGCGATCCAGACCTTTGTACCGCTCAATAAAAGGAGGGCCAGGCCGGATCACAATGGACTGACAGCTAGAATTAGTTACACTCTCTTATAGTATTATTCTTTCTCGCGGTGATATATAGCTTGTGTATATGCATGAACTGAATTTTGAC GGCATTTTAATGGCCGGAGTATACACGATTGCTATTCTTATGGTATGATTCACCAATGCACGTACTTCCGAATGAAAaaa ]
[+] EMBL AU225107 [ gccgcttcTTGTACCGCTCACTGAAGGGAGGGCCAGGCCGGATCACAATGGACTGACAGCTAGAATTAGTTACACTCTCTTATAGTATTATTCTTTCTCGCGGTGATATATAGCTTGTGTATATGCATGAACTGAATTTTGAC GGCATTTTAATGGCCGGAGTATACACGATTGCTATTCTTATGGTATGATTCACCAATGCACGTACTTCCGAgcgg ]
[-] EMBL AK107825 [ TGCACGTACTTCCGAATGAAATATAACAACTGTAC AGACTACTAGAGAGTAATGCACAAACTTGTATAATTGTCTTTCCTTTTGAGTTCTAACAACTATACACTCTGTACAAACACACGAGCAATTGATGCACAAGGAGACGCCCTGAGGGAGCTGAGAATAGCAGTTGTACACTTGTACGCCGGCGAGGCGGCCAGCAGGTGCCACCATCCGCGCACGCGTCACCAGACGGCTTTTGCCTACGGCGCCACGCTCCTGCGGCGGCCAGCGCCCCACTCGTAGCCGCGGCGGTGCCAGCGGCAGCGGAACGACCCGCGGTGCGCCGTGGGCGAGCACACGCAGTAGTGGTGCGGCTGAGCCTGATGAGGCTGCTCCCGCCGCGGCACGGGCGGCGGGGAACCCACTCGCGCCACCGGCGGCGCCCTCCGCCGCTTGACCTCGCACCCCGGCGGCAGAGGCGGCAGCCCAGGATGGCACATGCTCCCTCGCGGCGGAGAT]
consensusID : consensus_11431#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[ATATTTTGACCAATTGTTTGATGTGAAAAATATCAGCATGGTGGCTCTTGCAATGCTTACACAAGTTCGGAGACAACAAATTTCTATTTTGATGTCAATGTGGCCAATTTTGAAGAAGCATTAGACAGATTTGCTCAGTTTTTTATTAAGCCATTGATGTCGCAAGATGCTGTTCTTAGAGAGATTAAGGCTGTTGATTCTGGTAAGTTCTGATTATTCGCTTTGCACATGGTGATTGGTGATGCTATTTGTATCTAACATCGTATTATGCTTCTTATAATGTGGGTAGTTAACATGACATAACTACAACCCTATAAAAATCGCTTCAAAACTCACAGTTGTTTAATTTGGAGTAGCAATAAGCATATATTTTGGCTAACTTTGCTTTGTTTCGTCCTAGAACACAAGAAAAACTTGTTGTTTGATGGCTGGAGAATGTATCAGGTACTGCAACATTTCAAATTTGGTAGTTGATGTGTCATGTATTCTTCCTTGCAACACTGTGAAATCTGTATGACTGTATCAGAAGCTACAACCATTAAAGCATAGGATTATGTATCCCTTTCACTCAAAGAATATGTATATATTCTTTATTTACAAGGCATGTTTCCTTATATAAATATATATATAAACAATTGGTGAGACTATACACACGTTAATGGTCCTCCAATAAAAAAAAAAAAAA]
[-] EMBL CA763140 [ATATTTTGACCAATTGTTTGATGTGAAAAATATCAGCATGGTGGCTCTTGCAATGCTTACACAAGTTCGGAGACAACAAATTTCTATTTTGATGTCAATGTGGCCAATTTTGAAGAAGCATTAGACAGATTTGCTCAGTTTTTTATTAAGCCATTGATGTCGCAAGATGCTGTTCTTAGAGAGATTAAGGCTGTTGATTCTGGTAAGTTCTGATTATTCGCTTTGCACATGGTGATTGGTGATGCTATTTGTATCTAACATCGTATTATGCTTCTTATAATGTGGGTAGTTAACATGACATAACTACAACCCTATAAAAATCGCTTCAAAACTCACAGTTGTTTAATTTGGAGTAGCAATAAGCATATATTTTGGCTAACTTTGCTTTGTTTCGTCCTAGAACACAAGAAAAACTTGTTGTTTGATGGCTGGAGAATGTATCAGGTACTGCAACATTTCAAATTTGGTAGTTGATGTGTCATGTATTCTTCCTTGCAACACTGTGAAATCTGTATGACTGTATCAGAAGCTACAACCATTAAAGCATAGGATTATGTATCCCTTTCACTCAAAGAATATGTATATATTCTTTATTTACAAGGCATGTTTCCTTATATAAATATATATATAAACAATTGGTGAGACTATACACACGTTAATGGTCCTCCAATAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11431#0 TCTGCACTGCTAGTGTACNTACTCCGTCAATATTTATTTAATAGATTAGATGAGATAAGA 60
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GGAGCAAAAGACCCCACTTGCTTAGCCTCCAATCTAACCCCGGAGAACTACTGGAGTATC 120
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GCGCGGAGAGCGGAAGAGAGAGCAGAGGCTGTGGAGGCGGAGAGCGGAGAGCGAGCGGAC 180
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 ATGGCGGCGGCGGCGGCACCGGCGCCGGCGGAGAGCAATGTGGAGTTCATCCGCGCGCGG 240
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AGCGACAAGCGGGAGTACCGCCGGGTGGTGCTCCCCAACGCGCTCGAGTGCCTCCTCATC 300
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AGCGACTCCGAAACCGACAAGGCGGCGGCGTGTATGGAGTTTGGCGTGGGCTCGTTCAGC 360
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GACCCGGAGGGGCTCGAGGGCCTCGCCCACTTCCTCGAGCATATGCTATTTTATGCCAGT 420
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GAGAAATACCCTGGGGAACAAGATTACACGAAGTATATCACAGAGCATGGTGGCTCTTGC 480
consensus_11431#1 -----ATATTTTGACCAATTGTTTGATGTGAAAAATATC----AGCATGGTGGCTCTTGC 51
*** ** ** * * *** ***** *****************
consensus_11431#0 AATGCCTACACAAGTTCGGAGACAACAAATTTCTATTTTGATGTCAATGTGGCCAATTTT 540
consensus_11431#1 AATGCTTACACAAGTTCGGAGACAACAAATTTCTATTTTGATGTCAATGTGGCCAATTTT 111
***** ******************************************************
consensus_11431#0 GAAGAAGCATTAGACAGATTTGCTCAGTTTTTTATTAAGCCATTGATGTCGCAAGATGCT 600
consensus_11431#1 GAAGAAGCATTAGACAGATTTGCTCAGTTTTTTATTAAGCCATTGATGTCGCAAGATGCT 171
************************************************************
consensus_11431#0 GTTCTTAGAGAGATTAAGGCTGTTGATTCTGAACACAAGAAAAACTTGTT-GTCTGATGG 659
consensus_11431#1 GTTCTTAGAGAGATTAAGGCTGTTGATTCTG---GTAAGTTCTGATTATTCGCTTTGCAC 228
******************************* *** ** ** * *
consensus_11431#0 CTGGAGAATGTATCAGCTCCAAAAACATCTGGCTTCAAAGGATCACCCCTATCATAAATT 719
consensus_11431#1 ATGGTGATTG--GTGATGCTATTTGTATCTAACATC---GTATTATGCTTCTTATAA--- 280
*** ** ** * * **** * ** * ** * * * * ****
consensus_11431#0 CAGTACTGGGAGTTGGGAAACGCTAGAAACAAAACCAAAAGAGAGGGGATTGGACATTAG 779
consensus_11431#1 ---TGTGGGTAGTT--AACATGACATAACTACAACCCTATAAAAATCGCTTCAAAACTC- 334
* ** **** * * * * ** * **** * * * * ** * * *
consensus_11431#0 ACAGGAGCTTCTGAAGTTCTATGAGAATTATTCAGCAAACCTGATGCACCTTGTTGTTTA 839
consensus_11431#1 ACAGTTGTTT---AATTTGGAGTAGCAATAAGCATATATTTTGGCTAACTTTGCTTTGTT 391
**** * ** ** ** * ** * ** ** * ** ** *** * * *
consensus_11431#0 TGGAAAGGAGAGCCTGGATTGCATCCAAAGCTTTGTTGAGCGCTTGTTTAGTGACATAAA 899
consensus_11431#1 TCGT--------CCTAGAACACAAGAAAAACTT-GTTGTTTGATGGCTGGAGAATGTATC 442
* * *** ** ** *** *** **** * * * * * **
consensus_11431#0 AAACACTGATCAGAGAAGCTTCAAATGCCCAAGTCAACCTCTTTCAGAGCAGCATATGCA 959
consensus_11431#1 AGGTACTG-----CAACATTTCAAATTTGGTAGTTGATGTGTCATGTATTCTTCCTTGCA 497
* **** * ******* *** * * * * ****
consensus_11431#0 GCTTGTTATCAAAGCAATCCCGATATCTGAAGGCGATTACCTAAAAATATCATGGCCCGT 1019
consensus_11431#1 AC--ACTGTGAAA----TCTGTATGACTGTATCAGA--AGCTACAACCATTAAAG--CAT 547
* * * *** ** ** *** * ** * *** ** ** * * * *
consensus_11431#0 TACACCCAACATCCACTTTTACAAAGAAGGTCCTTCCCGTTATCTGAGTCACTTAATTGG 1079
consensus_11431#1 AGGATTATGTATCC-CTTTCACTCAAAGAATA--------TGTATATATTCTTTATTTAC 598
* **** **** ** * * * * * * * *** **
consensus_11431#0 GCATGAAGGCGAGGGATCCATCTTCCATAT-TATAAAGGAACTAGGATGGGCTATGAATT 1138
consensus_11431#1 -----AAGGCATGTTTCCTTATATAAATATATATATAAACAATTGGTGAGACTATACACA 653
***** * * * **** **** * * * ** * **** *
consensus_11431#0 TGTCGGCCGGGGAGGGCAGTGACAGTGCTCAATACTCCTTTTTTTCAATTAGCATGAGGC 1198
consensus_11431#1 CGTTAAT--GGTCCTCCAATAAAAAAAAAAAAAA-------------------------- 685
** ** ** * * * ** *
consensus_11431#0 TCACCGATGCTGGTCATGAACACATGGAAGACATCATTGGCTTGGTTTTCAAATATATTC 1258
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TTCTACTAAAAGAAAATGGGATCCATGAGTGGATCTTTGATGAGCTTGTGGCGATAAATG 1318
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AAACGGAATTCCACTATCAGGACAAAGTCCATCCAATCAGCTATGTGACAGATACTGTCT 1378
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CAACCATGCGGTTATTCCCACCAGAAGAATGGCTGGTTGGAGCATCACTACCGTCCAAGT 1438
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 ATGCTCCAAATAGAATAAATATGATACTTGATGAGTTGTCAGCTGAAAGAGTAAGGATAC 1498
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TGTGGGAATCTAAAAAGTTCAAAGGATCTACTGATTCTGTTGAGCCATGGTATAGTACAG 1558
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CGTATTCTGTTGAAAATGTTACTCCTTCCATGATACAGCAATGGATTCAAAAAGCTCCTA 1618
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CTGAGAAGCTCTGTATCCCAAAGCCTAACATTTTCATTCCAAAAGATTTATCGCTCAAAG 1678
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AAGCGCATGAAAAGGTTAAATATCCAGCAATATTGAGAAAGACACCACTTTCACGGTTGT 1738
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GGTATAAGCCTGACATGCTGTTCTCCACTCCAAAGGTTCACATTATAATTGATTTCCACT 1798
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GTCCGTTAACAAGCCATTCCCCCGAGGCAGTCATTTCTACGAGTCTCTTTGTTGATTTGT 1858
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TAGCTGATTACTTGAATGCATATGCGTATGATGCTCAAATTGCTGGTTTATTCTATTCAA 1918
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TATATCGCACTTCTGCTGGATTCCAGGTCTCAGTAGGTGGTTACAATGACAAAATGCGGA 1978
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TTCTGCTAGATGCCATTATGAAGCATATATCTAACTTTGAAGTTAAACCGAACAGGTTTT 2038
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GTGCCTTGAAGGAAACTGCTGTCAAGGACTACCAAAATTTCAAGTTCAGCCAACCATACT 2098
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CTCAAGCTTCATACTATCTCTCGTTGATATTGGAGGATCAGAAATGGCCTTTGGCTGAGA 2158
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AACTTGAGGCTCTTTCTAAGCTTGAACCAGATTCTCTTGCAAAGTTCATGCCACATTTGC 2218
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TATCGAAGACATTTTTGGAATGCTATATTCATGGGAACATTGAACCAAATGAGGCAACAT 2278
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CTATTGTCCAGGAGATTGAAGATACTATATTCAATACCCCTAATTCTGTGTTCAAATCAA 2338
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TGTCTCCATCACAATATCTGATTAAAAGGGTTATCATGCTTGAAAATGAGTTAAAATGCT 2398
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 ACCACCAAATTGAGGGCTTAAATCAGAAGAATGAAAATTCATCAGTGGTCCAATATATTC 2458
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AGGTTCATCTGGACGATGCCCTTTCAAATATCAAACTTCAACTGTTTGCTTTAATTGCGA 2518
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GCCAGCCTGCCTTCAACCAGCTGCGAACTGTTGAGCAGCTTGGCTATATAGCAGGTCTTT 2578
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CTTTAAGATCTGATTGTGGAGTCTGGGCACTCGAGGTTGTTATTCAGTCCACAGTAAAGG 2638
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 ATCCTTCACATCTTGATGCTAGGATTGATGAATTCTTCAAGATGTTTGAAAGCAAAATTC 2698
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 ATGAATTGTCAGACAAGGATTTTAAGAGGAATGTAAAATCACTTGTCGATTCGAAACTGG 2758
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AGAAATTCAAAAATTTGTGGGAGGAATCCCACTTCTATTGGGGAGAGATTGAGGCAGGAA 2818
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CTCTCAAGTTTGACAGGGTCGAGTCTGAGGTAGCTCTTCTAAGAGAGCTGAAGAAAGAAG 2878
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 AATTCATCGAATTTTTTGATCAGCATATAAGACTTGGTGCCCCTCAAAGGAAAACTGTAA 2938
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GCGTGCAAGTCTTCGGCGGCGAACATTTGGCAGAGTTCAAGAAGGCCATTGCTGAAGCTG 2998
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 ATACACCCAAAACTTACCGAATCACTGACATATTCGGCTTCAAGCGATCCAGACCTTTGT 3058
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 ACCGCTCACTGAAGGGAGGGCCAGGCCGGATCACAATGGACTGACAGCTAGAATTAGTTA 3118
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CACTCTCTTATAGTATTATTCTTTCTCGCGGTGATATATAGCTTGTGTATATGCATGAAC 3178
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TGAATTTTGACGGCATTTTAATGGCCGGAGTATACACGATTGCTATTCTTATGGTATGAT 3238
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TCACCAATGCACGTACTTCCGAATGAAATATAACAACTGTACAGACTACTAGAGAGTAAT 3298
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GCACAAACTTGTAAAAAAAAAGGACCTTTTGAGTTCTAACAACTATACACTCTGTACAAA 3358
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CACACGAGCAATTGATGCACAAGGAGACGCCCTGAGGGAGCTGAGAATAGCAGTTGTACA 3418
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CTTGTACGCCGGCGAGGCGGCCAGCAGGTGCCACCATCCGCGCACGCGTCACCAGACGGC 3478
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 TTTTGCCTACGGCGCCACGCTCCTGCGGCGGCCAGCGCCCCACTCGTAGCCGCGGCGGTG 3538
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CCAGCGGCAGCGGAACGACCCGCGGTGCGCCGTGGGCGAGCACACGCAGTAGTGGTGCGG 3598
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CTGAGCCTGATGAGGCTGCTCCCGCCGCGGCACGGGCGGCGGGGAACCCACTCGCGCCAC 3658
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 CGGCGGCGCCCTCCGCCGCTTGACCTCGCACCCCGGCGGCAGAGGCGGCAGCCCAGGATG 3718
consensus_11431#1 ------------------------------------------------------------
consensus_11431#0 GCACATGCTCCCTCGCGGCGGAGAT 3743
consensus_11431#1 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||