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Oryza sativa
cluster # 11432 cluster # 11432       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11432#0 length = 2090 sequences # 7  
consensus_11432#1 length = 568 sequences # 1  
consensus_11432#2 length = 447 sequences # 1  

consensusID : consensus_11432#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2090
fasta sequence
                              [CTCAAAGTGAACCCAAAAACCCTAGCGCCGCCGCCGCCGCCATGGAAGAAGCGTGGCCGCCTCACGCCCCCG--CCGGAAGCTGCGGCTCCTCCCGGAGGAGGAGGAGGTGGAGGAGCATGGGGCGCGGCGGCGGTGGCGCAGCGGAAGGAGGTGGCCGAGGAGTCGTCGGCGCATGCGGTGAGCCGGCTGGTGGCGAGCTGCGCCAACACGAGCGGCGTGGCGGTGGCCGTGGTGGACGCCAACGCCGTCATATCGGGCGGAGCCGCGCTCTCCTCGTCCGCCGCCCGCCTCGTCACGGTGCCCGAGGTGCTGGAGGAGGTGCGCGACGCGTCCGCGCGCCGCCGCCTCGCGCTCCTCATGGCCCCTGTCGAGACCCTCGACCCTGCCCCTGAATTCGTCAAGAAAGTTGTCAAATTTGCCCGGGAAACAGGAGACCTCCAGACGCTTTCAGATGTTGATATCAAGATTATTGCTCTAGCTTACATGCTGGAAGCTGAGATCCATGGGACTAACCATTTGCGGGAGCAGCCACCTCCTCTGCGTGTGGTGAATGTGAGAAACCTGAAAGAGGCTCCACTGCCAGGTTGGGGCTCTAATGTGCAGAACCTAGCAGAATGGGAAGAGTTGGACCAGATGTCTGAAGCAGGTGGGGATCTCAAGTCACGCATACTTCCACTGAAGGATCTTGAGAACCACGAAATACCGAATAGTGAGACCAACAGTATTTCTGACAAGCAAGGTGATGAAGAGCATCAGCCTGCAAAGAAAGATGTAGGTATTGCTTGGGAAGATGATGAGAATAATGAAGGTTGGTTGCCTGCTGTTAGTCGCAGTACACACAGAAGATATCTACGAAGGAAGGCGAGACGTGATGCCCTCAAGGAATCTGAACAAAGTATTGAGACAAGTTCTGCTGCCCCATCAATTGATGACGATAAAATTTTATCTGAAAATGGTTTGAATCCAGTGGATGGCCCTTCCGCTGATACTGATGTTATGGAGCACCAAGAAGTGAATGAACCTGAAATTGTTGCAGATCATTCGCAATCTGATAATAAGGACAATGGGGTAGGCAATGTTGGTGATGTTGAGGAGACCGGCGGTACGGACGCATGCATTGAAGAGTTGGATAATTTGGATATCAAAAGCGACTCTGAGGAAGGTGTCGATTCATCTCTTGCAGATGATGGGAGCAGTGAGCAGAGTTGGGCGTTGAGGTCCTTATCTGAATCTACTGTAGCATGCATAACCAGTGACTATGCCATGCAAAATGTCATCCTGCAGATTGGTCTCCGTCTCTTGGCACCAGGTGGCATGCAAATACGTCAGTTGCACAGGTGGGTTCTGAGGTGTCATGCTTGCTATAAGGTGACCCAAGAGATTGGGAAAATATTTTGCCCAAAATGTGGCAACGGTGGCACCTTACGGAAGGTTTCGGTAACAGTTGGTGAAAATGGGATCACTATGGCCTCACGACGTCCGCGTGTGACACTTCGAGGCACAAAATTTTCCCTCCCAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAGCAGGACGATGATTTC-TTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGAAAGTACCACTGAAACCTCCAGT-GAGGAAGGCCCTTGCAAT-GTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTACTATCAT-GGTTTTGTACTGCATTGTTTGACGAGAGAAGT-AGAGTGTATCACCTTGAT-GGNGATT-GTGGAG-AAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACATCTATGTAAGGCTCAGTTCCATAGTACCATTTTCATATCAATTACAGCTGGAGTATTTTGAGTGCATGAATTGCGAATACATCCAGAGGTTTAACGTTTTTTCGAACAAAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTGAC]

[+] EMBL AK102050             [CTCAAAGTGAACCCAAAAACCCTAGCGCCGCCGCCGCCGCCATGGAAGAAGCGTGGCCGCCTCACGCCCCCG  CCGGAAGCTGCGGCTCCTCCCGGAGGAGGAGGAGGTGGAGGAGCATGGGGCGCGGCGGCGGTGGCGCAGCGGAAGGAGGTGGCCGAGGAGTCGTCGGCGCATGCGGTGAGCCGGCTGGTGGCGAGCTGCGCCAACACGAGCGGCGTGGCGGTGGCCGTGGTGGACGCCAACGCCGTCATATCGGGCGGAGCCGCGCTCTCCTCGTCCGCCGCCCGCCTCGTCACGGTGCCCGAGGTGCTGGAGGAGGTGCGCGACGCGTCCGCGCGCCGCCGCCTCGCGCTCCTCATGGCCCCTGTCGAGACCCTCGACCCTGCCCCTGAATTCGTCAAGAAAGTTGTCAAATTTGCCCGGGAAACAGGAGACCTCCAGACGCTTTCAGATGTTGATATCAAGATTATTGCTCTAGCTTACATGCTGGAAGCTGAGATCCATGGGACTAACCATTTGCGGGAGCAGCCACCTCCTCTGCGTGTGGTGAATGTGAGAAACCTGAAAGAGGCTCCACTGCCAGGTTGGGGCTCTAATGTGCAGAACCTAGCAGAATGGGAAGAGTTGGACCAGATGTCTGAAGCAGGTGGGGATCTCAAGTCACGCATACTTCCACTGAAGGATCTTGAGAACCACGAAATACCGAATAGTGAGACCAACAGTATTTCTGACAAGCAAGGTGATGAAGAGCATCAGCCTGCAAAGAAAGATGTAGGTATTGCTTGGGAAGATGATGAGAATAATGAAGGTTGGTTGCCTGCTGTTAGTCGCAGTACACACAGAAGATATCTACGAAGGAAGGCGAGACGTGATGCCCTCAAGGAATCTGAACAAAGTATTGAGACAAGTTCTGCTGCCCCATCAATTGATGACGATAAAATTTTATCTGAAAATGGTTTGAATCCAGTGGATGGCCCTTCCGCTGATACTGATGTTATGGAGCACCAAGAAGTGAATGAACCTGAAATTGTTGCAGATCATTCGCAATCTGATAATAAGGACAATGGGGTAGGCAATGTTGGTGATGTTGAGGAGACCGGCGGTACGGACGCATGCATTGAAGAGTTGGATAATTTGGATATCAAAAGCGACTCTGAGGAAGGTGTCGATTCATCTCTTGCAGATGATGGGAGCAGTGAGCAGAGTTGGGCGTTGAGGTCCTTATCTGAATCTACTGTAGCATGCATAACCAGTGGCTATGCCATGCAAAATGTCATCCTGCAGATTGGTCTCCGTCTCTTGGCACCAGGTGGCATGCAAATACGTCAGTTGCACAGGTGGGTTCTGAGGTGTCATGCTTGCTGTAAGGTGACCCAAGAGATTGGGAAAATATTTTGCCCAAAATGTGGCAACGGTGGCACCTTACGGAAGGTTTCGGTAACAGTTGGTGAAAATGGGATCACTATGGCCTCACGACGTCCGCGTGTGACACTTCGAGGCACAAAATTTTCCCTCCCAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAGCAGGACGATGATTTC TTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGAAAGTACCACTGAAACCTCCAGT GAGGAAGGCCCTTGCAAT GTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTACTATCAT GGTTTTGTACTGCATTGTTTGACGAGAGAAGT AGAGTGTATCCCCTTGAT GGTGATT GTGGAG AAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACATCTATGTAAGGCTCAGTTCCATAGTACCATTTTCATATCAATTACAGCTGGAGTATTT                                                                                                    ]
[+] EMBL C93539               [                      tantnCCGCCGCCGCCGCCATGGAAGAAGCGTGGCCGCCTCTCGCCCCCGCCCCGGAAGCTGCGGCTCCTCCCGGAGGAGGAGGAGGTGGAGGAGCATGGGGCGNGGCGGCGGTGGCGCA CGGAAGNAGGTGGCCGAGGAGTCGTCGGCGCATNCGGTGAGCCGGCTGGTGGCGAGCTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB649459             [                                                                                                                                                                                                                    AGCGGCGTGGCGGTGGCCGTGGTGGACGCCAACGCCGTCATATCGGGCGGAGCCTCTCTCTCCTCGTCCGCCGCCCGCCTCGTCACGGTGCCCGAGGTGCTGGAGGAGGTGCGCGACGCGTCCGCGCGCCGCCGCCTCGCGCTCCTCATGGCCCCTGTCGAGACCCTCGACCCTGCCCCTGAGTTCGTCAAGATAGTTGTCCCCTTTGCCCGGGAAACGGGACACCTCCAGACGCTTTCAGATGTTGATATCAAGATTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF197083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACGCATACTTCCACTGAAGGATCTTGAGAACCACGAAATACCGAATAGTGAGACCAACAGTATTTCTGACAAGCAAGGTGATGAAGAGCATCGGCCTGCAAAGAAAGATGTAGGTATTGCTTGGGAAGATGATGAGAATAATGAAGGTTGGTTGCCTGCCGTTAGTCGCAGTACACACAGAAGATATCTACGAAGGAAGGCGAGACGTGATGCCCTCAAGGAATCTGAACAAAGTTTTGAGACAAGTTCTGCTGCCCCATCAATTGATGACGATAAAATTTTATCTGAAAATGGTTTGAATCCAGTGGATGGCCCTTCCGCTGATACTGATGTTATGGAGCACCAAGAAGTGAATGAACCTGAAATTGTTGCAGATCATTCGNAATCTGATAATAAGGACAATGGGGTANNCAATGTTGGTGATGTTGANNNNNNCGGCGGTACGNANGCATGCATTNANNNGTTGGATAATTTGGATATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA765683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAATGTTGATGATGTTGAGGAGACCGGCGGTACGGACGCATGCATTGAAGAGTTGGATAATTTGGATATCAAAAGCGACTCTGAGGAAGGTGTCGATTCATCTCTTGCAGATGATGGGAGCAGTGAGCAGAGTTGGGCGTTGAGGTCCTTATCTGAATCTACTGTAGCATGCATAACCAGTGACTATGCCATGCAAAATGTCATCCTGCAGATTGGTCTCCGTCTCTTGGCACCAGGTGGCATGCAAATACGTCAGTTGCACAGGTGGGTTCTGAGGTGTCATGCTTGCTATAAGGTGACCCAAGAGATTGGGAAAATATTTTGCCCAAAATGTGGCAACGGTGGCACCTTACGGAAGGTTTCGGTAACAGTTGGTGAAAATGGGATCACTATGGCCTCACGACGGCCGCGTGTGACACTTCGAGGCACAAAATTTTCCCTCCCAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAGCAGGACGATGATTTC TTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGAAAGTACCGCTGAAACCTCCAGTGGAGGAAGGCCCTTGCAATGGTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGNTCCCCATTTGGTGCTCTTTTACTATCATGGGTTTTGTACTGCATTGGTTGACGAGAGAAGTAANAGTGTATCACCTTGATGGGNGATTGGNGGAGAAAAAAAGTCA                                                                                                                                                                                                                   ]
[+] EMBL CF330954             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATTGAAGAGTTGGATAATTTGGATATCAAAATCGACTCTGAGGAAGGTGTCGATTCATCTCTTGCAGATGATGGGAGCAGTGAGCAGAGTTGGGCGTTGAGGTCCTTATCTGAATCTACTGTAGCATGCATAATCAGTGACTATGCCATGCAAAATGTCATCCTGCAGATTGGTCTCCGTCTCTTGGCACCAGGTGGCATGCAAATACGTCAGTTGCACAGGTGGGTTCTGAGGTGTCATGCTTGCTATAAGGTGACCCAAGAGATTGGGAAAATATTTTGCCCAAAATGTGGCAACGGTGGCACCTTACGGAAGGTTTCGGTAACAGTTGGTGAAAATGGGATCACTATGGCCTCACGACGTCCGCGTGTGACACTTCGAGGCACAAAATTTTCCCTCCCAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAGCAGGACGATGATTTCTTTGGGTGTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF330955             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCCTCCCAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAGCAGGACGATGATTTC TTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGAAAGTACCACTGAAACCTCCAGT GAGGAAGGCCCTTGCAAT GTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCTCCATTTGTTGCTCTTTTACTATCAT GGTTTTGTACTGCATTGTTTGACGAGAGAAGT AGAGTGTATCACCTTGAT AGAAATT GTGGAG AAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACATCTATGTAAGGCTCAGTTCCATAGTACCATTTTCATATCAATTACAGCTGGAGTATTTTGAGTGCATGAATTGCGAATACATCCAGAGGTTTAACGTTTTTTCGAACAAAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTGAC]


>consensus_11432#0 CTCAAAGTGAACCCAAAAACCCTAGCGCCGCCGCCGCCGCCATGGAAGAAGCGTGGCCGC CTCACGCCCCCGCCGGAAGCTGCGGCTCCTCCCGGAGGAGGAGGAGGTGGAGGAGCATGG GGCGCGGCGGCGGTGGCGCAGCGGAAGGAGGTGGCCGAGGAGTCGTCGGCGCATGCGGTG AGCCGGCTGGTGGCGAGCTGCGCCAACACGAGCGGCGTGGCGGTGGCCGTGGTGGACGCC AACGCCGTCATATCGGGCGGAGCCGCGCTCTCCTCGTCCGCCGCCCGCCTCGTCACGGTG CCCGAGGTGCTGGAGGAGGTGCGCGACGCGTCCGCGCGCCGCCGCCTCGCGCTCCTCATG GCCCCTGTCGAGACCCTCGACCCTGCCCCTGAATTCGTCAAGAAAGTTGTCAAATTTGCC CGGGAAACAGGAGACCTCCAGACGCTTTCAGATGTTGATATCAAGATTATTGCTCTAGCT TACATGCTGGAAGCTGAGATCCATGGGACTAACCATTTGCGGGAGCAGCCACCTCCTCTG CGTGTGGTGAATGTGAGAAACCTGAAAGAGGCTCCACTGCCAGGTTGGGGCTCTAATGTG CAGAACCTAGCAGAATGGGAAGAGTTGGACCAGATGTCTGAAGCAGGTGGGGATCTCAAG TCACGCATACTTCCACTGAAGGATCTTGAGAACCACGAAATACCGAATAGTGAGACCAAC AGTATTTCTGACAAGCAAGGTGATGAAGAGCATCAGCCTGCAAAGAAAGATGTAGGTATT GCTTGGGAAGATGATGAGAATAATGAAGGTTGGTTGCCTGCTGTTAGTCGCAGTACACAC AGAAGATATCTACGAAGGAAGGCGAGACGTGATGCCCTCAAGGAATCTGAACAAAGTATT GAGACAAGTTCTGCTGCCCCATCAATTGATGACGATAAAATTTTATCTGAAAATGGTTTG AATCCAGTGGATGGCCCTTCCGCTGATACTGATGTTATGGAGCACCAAGAAGTGAATGAA CCTGAAATTGTTGCAGATCATTCGCAATCTGATAATAAGGACAATGGGGTAGGCAATGTT GGTGATGTTGAGGAGACCGGCGGTACGGACGCATGCATTGAAGAGTTGGATAATTTGGAT ATCAAAAGCGACTCTGAGGAAGGTGTCGATTCATCTCTTGCAGATGATGGGAGCAGTGAG CAGAGTTGGGCGTTGAGGTCCTTATCTGAATCTACTGTAGCATGCATAACCAGTGACTAT GCCATGCAAAATGTCATCCTGCAGATTGGTCTCCGTCTCTTGGCACCAGGTGGCATGCAA ATACGTCAGTTGCACAGGTGGGTTCTGAGGTGTCATGCTTGCTATAAGGTGACCCAAGAG ATTGGGAAAATATTTTGCCCAAAATGTGGCAACGGTGGCACCTTACGGAAGGTTTCGGTA ACAGTTGGTGAAAATGGGATCACTATGGCCTCACGACGTCCGCGTGTGACACTTCGAGGC ACAAAATTTTCCCTCCCAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATT TTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAG CAGGACGATGATTTCTTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGAAAGTA CCACTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGAATCCGAAT GACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTAC TATCATGGTTTTGTACTGCATTGTTTGACGAGAGAAGTAGAGTGTATCACCTTGATGGNG ATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAA TTTTGCAGAACATCTATGTAAGGCTCAGTTCCATAGTACCATTTTCATATCAATTACAGC TGGAGTATTTTGAGTGCATGAATTGCGAATACATCCAGAGGTTTAACGTTTTTTCGAACA AAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTGAC



consensusID : consensus_11432#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 568
fasta sequence
                              [NAAAATTTTTTTGGCCNAAAAATTGGGCAAACGGGTGGGCACCTTACGGAAAGTTTCGGGTAACAGTTGGTGAAAATGGGGATCACTAATGGCCTNACGACGTCGGCGTGTGACACTTCGAGGCACAAAATTTTCCCTCCCAAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAGCAGGACGATGATTTCTTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGAAAGTACCACTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTACTATCATGGTTTTGTACTGCATTGTTTGACGAGAGAAGTAGAGTGTATCACCTTGATGGTGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACAAAAAAAAAAAA]

[+] EMBL AU093021             [NAAAATTTTTTTGGCCNAAAAATTGGGCAAACGGGTGGGCACCTTACGGAAAGTTTCGGGTAACAGTTGGTGAAAATGGGGATCACTAATGGCCTNACGACGTCGGCGTGTGACACTTCGAGGCACAAAATTTTCCCTCCCAAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAAACAAGCAGGACGATGATTTCTTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGAAAGTACCACTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTACTATCATGGTTTTGTACTGCATTGTTTGACGAGAGAAGTAGAGTGTATCACCTTGATGGTGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACAAAAAAAAAAAA]


>consensus_11432#1 NAAAATTTTTTTGGCCNAAAAATTGGGCAAACGGGTGGGCACCTTACGGAAAGTTTCGGG TAACAGTTGGTGAAAATGGGGATCACTAATGGCCTNACGACGTCGGCGTGTGACACTTCG AGGCACAAAATTTTCCCTCCCAAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATC CCATTTTGCGTGAAGACCAGCTTCCCCAGAAGGTTCTGCACCCTAAATCGAAGAAGTCAA ACAAGCAGGACGATGATTTCTTGGGTGTCGAGGACATATTTTCGCACAGCGGTGAAAAGA AAGTACCACTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGAATC CGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCT TTTACTATCATGGTTTTGTACTGCATTGTTTGACGAGAGAAGTAGAGTGTATCACCTTGA TGGTGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTA TACAATTTTGCAGAACAAAAAAAAAAAA



consensusID : consensus_11432#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence
                              [CAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGTAAGGTTCTGCGACCCTAAATCGAAGAAGTCAAACAAGCAGGACGANGATTTCTTGGGTGTCGAGGACATATTTTCGCACAGTCGGTGTAAAAGAAAGTACCGCTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTACTATCATGGTTTTGGTACTGCATTGTTTGACGAGAGAAGTGAGAGTGTATCACCTTGATGGTGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACATCTATGTAAGGCTCAGTTCCANTAAAAAAAAAA]

[+] EMBL BQ908134             [CAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAGTAAGGTTCTGCGACCCTAAATCGAAGAAGTCAAACAAGCAGGACGANGATTTCTTGGGTGTCGAGGACATATTTTCGCACAGTCGGTGTAAAAGAAAGTACCGCTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTACTATCATGGTTTTGGTACTGCATTGTTTGACGAGAGAAGTGAGAGTGTATCACCTTGATGGTGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACATCTATGTAAGGCTCAGTTCCANTAAAAAAAAAA]


>consensus_11432#2 CAAGGTGGAAGAGATGCCATAACTAAGAATCCCATTTTGCGTGAAGACCAGCTTCCCCAG TAAGGTTCTGCGACCCTAAATCGAAGAAGTCAAACAAGCAGGACGANGATTTCTTGGGTG TCGAGGACATATTTTCGCACAGTCGGTGTAAAAGAAAGTACCGCTGAAACCTCCAGTGAG GAAGGCCCTTGCAATGTTCAGTGGGAAACGGAATCCGAATGACAACCACTTTTCTCGCAA GAAGCATTGAATTTCTGTTCCCCATTTGTTGCTCTTTTACTATCATGGTTTTGGTACTGC ATTGTTTGACGAGAGAAGTGAGAGTGTATCACCTTGATGGTGATTGTGGAGAAAAAAGTC ATCCTGTAGACTGAACTCTGATGAAGCATGTAAGCTATACAATTTTGCAGAACATCTATG TAAGGCTCAGTTCCANTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11432#0      CTCAAAGTGAACCCAAAAACCCTAGCGCCGCCGCCGCCGCCATGGAAGAAGCGTGGCCGC 60
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      CTCACGCCCCCGCCGGAAGCTGCGGCTCCTCCCGGAGGAGGAGGAGGTGGAGGAGCATGG 120
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      GGCGCGGCGGCGGTGGCGCAGCGGAAGGAGGTGGCCGAGGAGTCGTCGGCGCATGCGGTG 180
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      AGCCGGCTGGTGGCGAGCTGCGCCAACACGAGCGGCGTGGCGGTGGCCGTGGTGGACGCC 240
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      AACGCCGTCATATCGGGCGGAGCCGCGCTCTCCTCGTCCGCCGCCCGCCTCGTCACGGTG 300
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      CCCGAGGTGCTGGAGGAGGTGCGCGACGCGTCCGCGCGCCGCCGCCTCGCGCTCCTCATG 360
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      GCCCCTGTCGAGACCCTCGACCCTGCCCCTGAATTCGTCAAGAAAGTTGTCAAATTTGCC 420
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      CGGGAAACAGGAGACCTCCAGACGCTTTCAGATGTTGATATCAAGATTATTGCTCTAGCT 480
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      TACATGCTGGAAGCTGAGATCCATGGGACTAACCATTTGCGGGAGCAGCCACCTCCTCTG 540
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      CGTGTGGTGAATGTGAGAAACCTGAAAGAGGCTCCACTGCCAGGTTGGGGCTCTAATGTG 600
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      CAGAACCTAGCAGAATGGGAAGAGTTGGACCAGATGTCTGAAGCAGGTGGGGATCTCAAG 660
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      TCACGCATACTTCCACTGAAGGATCTTGAGAACCACGAAATACCGAATAGTGAGACCAAC 720
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      AGTATTTCTGACAAGCAAGGTGATGAAGAGCATCAGCCTGCAAAGAAAGATGTAGGTATT 780
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      GCTTGGGAAGATGATGAGAATAATGAAGGTTGGTTGCCTGCTGTTAGTCGCAGTACACAC 840
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      AGAAGATATCTACGAAGGAAGGCGAGACGTGATGCCCTCAAGGAATCTGAACAAAGTATT 900
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      GAGACAAGTTCTGCTGCCCCATCAATTGATGACGATAAAATTTTATCTGAAAATGGTTTG 960
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      AATCCAGTGGATGGCCCTTCCGCTGATACTGATGTTATGGAGCACCAAGAAGTGAATGAA 1020
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      CCTGAAATTGTTGCAGATCATTCGCAATCTGATAATAAGGACAATGGGGTAGGCAATGTT 1080
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      GGTGATGTTGAGGAGACCGGCGGTACGGACGCATGCATTGAAGAGTTGGATAATTTGGAT 1140
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      ATCAAAAGCGACTCTGAGGAAGGTGTCGATTCATCTCTTGCAGATGATGGGAGCAGTGAG 1200
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      CAGAGTTGGGCGTTGAGGTCCTTATCTGAATCTACTGTAGCATGCATAACCAGTGACTAT 1260
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      GCCATGCAAAATGTCATCCTGCAGATTGGTCTCCGTCTCTTGGCACCAGGTGGCATGCAA 1320
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      ATACGTCAGTTGCACAGGTGGGTTCTGAGGTGTCATGCTTGCTATAAGGTGACCCAAGAG 1380
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      -----------------------------------------------------------N 1
                                                                                   

consensus_11432#0      ATTGGGAAAATATTTTGCCCAAAATGTGGCAACGGTGGCACCTTACGGAAGGTTTCGG-T 1439
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      AAAATTTTTTTGGCCNAAAAATTGGGCAAACGGGTGGGCACCTTACGGAAAGTTTCGGGT 61
                                                                                   

consensus_11432#0      AACAGTTGGTGAAAATGGGATCACT--ATGGCCTCACGACGTCCGCGTGTGACACTTCGA 1497
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      AACAGTTGGTGAAAATGGGGATCACTAATGGCCTNACGACGTCGGCGTGTGACACTTCGA 121
                                                                                   

consensus_11432#0      GGCACAAAATTTTCCCTCCCAA-TGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCC 1556
consensus_11432#2      ----------------------------CAAGGTGGAAGAGATGCCATAACTAAGAATCC 32
consensus_11432#1      GGCACAAAATTTTCCCTCCCAAATGCCCCAAGGTGGAAGAGATGCCATAACTAAGAATCC 181
                                                   ********************************

consensus_11432#0      CATTTTGCGTGAAGACCAGCTTCCCCAG-AAGGTTCTGC-ACCCTAAATCGAAGAAGTCA 1614
consensus_11432#2      CATTTTGCGTGAAGACCAGCTTCCCCAGTAAGGTTCTGCGACCCTAAATCGAAGAAGTCA 92
consensus_11432#1      CATTTTGCGTGAAGACCAGCTTCCCCAG-AAGGTTCTGC-ACCCTAAATCGAAGAAGTCA 239
                       **************************** ********** ********************

consensus_11432#0      AACAAGCAGGACGATGATTTCTTGGGTGTCGAGGACATATTTTCGCACAG-CGGTG-AAA 1672
consensus_11432#2      AACAAGCAGGACGANGATTTCTTGGGTGTCGAGGACATATTTTCGCACAGTCGGTGTAAA 152
consensus_11432#1      AACAAGCAGGACGATGATTTCTTGGGTGTCGAGGACATATTTTCGCACAG-CGGTG-AAA 297
                       ************** *********************************** ***** ***

consensus_11432#0      AGAAAGTACCACTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGA 1732
consensus_11432#2      AGAAAGTACCGCTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGA 212
consensus_11432#1      AGAAAGTACCACTGAAACCTCCAGTGAGGAAGGCCCTTGCAATGTTCAGTGGGAAACGGA 357
                       ********** *************************************************

consensus_11432#0      ATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGC 1792
consensus_11432#2      ATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGC 272
consensus_11432#1      ATCCGAATGACAACCACTTTTCTCGCAAGAAGCATTGAATTTCTGTTCCCCATTTGTTGC 417
                       ************************************************************

consensus_11432#0      TCTTTTACTATCATGGTTTTG-TACTGCATTGTTTGACGAGAGAAGT-AGAGTGTATCAC 1850
consensus_11432#2      TCTTTTACTATCATGGTTTTGGTACTGCATTGTTTGACGAGAGAAGTGAGAGTGTATCAC 332
consensus_11432#1      TCTTTTACTATCATGGTTTTG-TACTGCATTGTTTGACGAGAGAAGT-AGAGTGTATCAC 475
                       ********************* ************************* ************

consensus_11432#0      CTTGATGGNGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTA 1910
consensus_11432#2      CTTGATGGTGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTA 392
consensus_11432#1      CTTGATGGTGATTGTGGAGAAAAAAGTCATCCTGTAGACTGAACTCTGATGAAGCATGTA 535
                       ******** ***************************************************

consensus_11432#0      AGCTATACAATTTTGCAGAACATCTATGTAAGGCTCAGTTCCATAGTACCATTTTCATAT 1970
consensus_11432#2      AGCTATACAATTTTGCAGAACATCTATGTAAGGCTCAGTTCCANTAAAAAAAAAA----- 447
consensus_11432#1      AGCTATACAATTTTGCAGAACAAAAAAAAAAAA--------------------------- 568
                       **********************   *   **                             

consensus_11432#0      CAATTACAGCTGGAGTATTTTGAGTGCATGAATTGCGAATACATCCAGAGGTTTAACGTT 2030
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   

consensus_11432#0      TTTTCGAACAAAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTGAC 2090
consensus_11432#2      ------------------------------------------------------------
consensus_11432#1      ------------------------------------------------------------
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)