These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11434#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2538 fasta sequence [CGCTTTCCTCTCCTTGCCACCACCACCTCTCCTCCTATTGTAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGTTCTTCGATCGCCCGCCTTTCCATACCCATTCCTTCTGTATTTCATTCTTGATTTTGGGGGGAAGATGGGATAAACAATTGGTTATCCAGTAGATAACTTCGTTGATCGATTGACGTCGATTTTTATTTTTATTGCTAATGGAGAAGAAGCTAGGTGATATTAACTTGTTTGTTTCTAGCAACATGAGGGTACAAGATCTCTTTCAGTTTTGACACAACCAAATGAGCATCCAAAGTAACACTACTGTACTTAGTATCGCGATGTTCTTCAAAATGCTGTGTTAATGAAAATGAAATAGTGTGCTGACAGTTGATTCATGCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGAGTGCACTTCAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGGTGGGTCTCTAAATCTATTAAATTATCTGATACATTTTTATTCCCCTCAAAATTAGTTCTGCTGGAAGCAAAAACTACTATATTGGACTTTGAGTTGCCTAGTAAGATTTTAGTATAAAACTATTGTTGCATAGCTAATCGGAGGCCAAAGACCAGTAACCAAGTACTACTTCTGAATATGTTGTGACTTGTGATCAATGTATTAATTACATGCATTTTCTGCAATAATATTACCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAATTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACAACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGGTGTTCAGTGATCTCCACTAGAATTTGATTAGAAACCAAATTGCAGCACTGTGTGAATACTTCAGTAATTTTTTTCCTCCTCCATATGCAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCACGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTT-CCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCAACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACA-TCCCCTTCTATGTTGAG--TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTAAAAAAAA] [+] EMBL AK067799 [CGCTTTCCTCTCCTTGCCACCACCACCTCTCCTCCTATTGTAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGTTCTTCGATCGCCCGCCTTTCCATACCCATTCCTTCTGTATTTCATTCTTGATTTTGGGGGGAAGATGGGATAAACAATTGGTTATCCAGTAGATAACTTCGTTGATCGATTGACGTCGATTTTTATTTTTATTGCTAATGGAGAAGAAGCTAGGTGATATTAACTTGTTTGTTTCTAGCAACATGAGGGTACAAGATCTCTTTCAGTTTTGACACAACCAAATGAGCATCCAAAGTAACACTACTGTACTTAGTATCGCGATGTTCTTCAAAATGCTGTGTTAATGAAAATGAAATAGTGTGCTGACAGTTGATTCATGCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGAGTGCACTTCAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGGTGGGTCTCTAAATCTATTAAATTATCTGATACATTTTTATTCCCCTCAAAATTAGTTCTGCTGGAAGCAAAAACTACTATATTGGACTTTGAGTTGCCTAGTAAGATTTTAGTATAAAACTATTGTTGCATAGCTAATCGGAGGCCAAAGACCAGTAACCAAGTACTACTTCTGAATATGTTGTGACTTGTGATCAATGTATTAATTACATGCATTTTCTGCAATAATATTACCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAATTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACAACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGGTGTTCAGTGATCTCCACTAGAATTTGATTAGAAACCAAATTGCAGCACTGTGTGAATACTTCAGTAATTTTTTTCCTCCTCCATATGCAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCACGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTT CCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCAACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACA TCCCCTTCTATGTTGAG TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAA ] [-] EMBL CF276367 [ AAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTTCCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC AAAAAAAAAACTCAACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACATTCCCCTTCTATGTTGAGTTTTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTAAAAAAAA] consensusID : consensus_11434#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 810 fasta sequence [ATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATGTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCTCGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCATCTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC-AAAAAAAAAAACTCAACCTAAGGATAATCCAGA-TTCGTTGTTCTA-GGAGGGGTCACATCCCCTTCTATGTTGAG--TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAAAGTTAGGTTGCAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CB673108 [ATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATGTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCTCGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCATCTTCCATACAGCACTATGGCCTTACTTTGCTCATATCAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAAACTCAACCTAAGGATAATCCAGA TTCGTTGTTCTA GGAGGGGTCACATCCCCTTCTATGTTGAG TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAAGATTATTATT ] [+] EMBL AU075977 [ AGTAGATGTCAACTTCCATACAGCACTNTGGCCTTACTTTGCNCATAACAACATACATNTTAAGAATGAGTGGCTTCANAATGCCGGTNCCGGCGTCATCGCCCATNTGGCGGACAGCNTAAAACAGCAGGAGTCCCGGAAATATTNCCGTGCCAACTTNTAAGATCTTCAGNCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATANCCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC AAAAAAAAAAACTCAACCTAAGGATAATCCAGA TTCGTTGTTCTA GGAGGGGTCACATCCCCTTCTATGTTGAGTTTTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGC TTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTATTTAGTTAGGTTGCAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF336627 [ TCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGG AATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC AAAAAAAAAAACTCAACCTAAGGATAATCCAGATTTCGTTG TCTAGGGAGGGGTCACATCCCCTTCTATGTTGAG TTTTTTTTTTTGGGACGGATGGAGTACGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAA ] [-] EMBL CF336628 [ AAAAAAACTCAACCTAAGGATAATCCAGA TTCGTTGTTCTA GGAGGGGTCACATCCCCTTCTATGTTGAG TTTTTTTTTTTGGGACGGATGGAGTACGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAAA ] consensusID : consensus_11434#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence [TGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAACTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACCACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCG] [+] EMBL CF303362 [TGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAACTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACCACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCG] consensusID : consensus_11434#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence [TTATAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAGGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACATCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGA] [+] EMBL CF276366 [TTATAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAGGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACATCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGA] consensusID : consensus_11434#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 374 fasta sequence [CCGCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGG] [+] EMBL OSC100221 [CCGCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11434#0 CGCTTTCCTCTCCTTGCCACCACCACCTCTCCTCCTATTGTAGCCACCAACTCCGCCGCC 60 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGTTCTTCGATCG 120 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 CCCGCCTTTCCATACCCATTCCTTCTGTATTTCATTCTTGATTTTGGGGGGAAGATGGGA 180 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TAAACAATTGGTTATCCAGTAGATAACTTCGTTGATCGATTGACGTCGATTTTTATTTTT 240 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 ATTGCTAATGGAGAAGAAGCTAGGTGATATTAACTTGTTTGTTTCTAGCAACATGAGGGT 300 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 ACAAGATCTCTTTCAGTTTTGACACAACCAAATGAGCATCCAAAGTAACACTACTGTACT 360 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TAGTATCGCGATGTTCTTCAAAATGCTGTGTTAATGAAAATGAAATAGTGTGCTGACAGT 420 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TGATTCATGCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAA 480 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 GCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAG 540 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 ATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAG 600 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 AAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGCTAGTTCGTCAAATA 660 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTAT 720 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGG 780 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 GTGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAA 840 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 GTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGAGTGCACTT 900 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 CAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCAC 960 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 ACCTTGGTGTTAGAGGGAAAAATCAGGTGGGTCTCTAAATCTATTAAATTATCTGATACA 1020 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TTTTTATTCCCCTCAAAATTAGTTCTGCTGGAAGCAAAAACTACTATATTGGACTTTGAG 1080 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TTGCCTAGTAAGATTTTAGTATAAAACTATTGTTGCATAGCTAATCGGAGGCCAAAGACC 1140 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 AGTAACCAAGTACTACTTCTGAATATGTTGTGACTTGTGATCAATGTATTAATTACATGC 1200 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 ATTTTCTGCAATAATATTACCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGA 1260 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAATTCTTTCTCACGG 1320 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 ATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAA 1380 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 AATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTC 1440 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAG 1500 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 CAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACT 1560 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 CCTAGTTAGTACAACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCA 1620 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 AACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGG 1680 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 CGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGGTGTTCAGTGATCTCCACTAG 1740 consensus_11434#1 ------------------------------------------------------------ consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 AATTTGATTAGAAACCAAATTGCAGCACTGTGTGAATACTTCAGTAATTTTTTTCCTCCT 1800 consensus_11434#1 --------------------------ATGGCGAACAT-CTTCAATAAGAAGAGAAAAAGA 33 consensus_11434#3 ------------------------TTATAGCCACCAA--CTCCGCCGCCTCCGCCTCCGC 34 consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 -------------------------TGCAATTGCTGGGCTGGAACCAATTAATTTTATTA 35 consensus_11434#0 CCATATGCAGCCCTCACATCGTT--CACTGGATGGCTACAAGCACATTGTGAATATGGAA 1858 consensus_11434#1 CCTTACAAAGCCCTCACATCGTT--CACTGGATGGCTACAAGCACATTGTGAATATGGAA 91 consensus_11434#3 CTCCGCCCCTCCACCGCCGCCTC--CGGCCGGCCGTCAGAACTTGACAGTGG-TAGAGAA 91 consensus_11434#4 --------------------CCG--CGGCCGGCCGTCAGAACTTGACAGTGG-TAGAGAA 37 consensus_11434#2 CCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGCTTCCATTTCTTCAAGGGC 95 * * * * * consensus_11434#0 TATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAA 1918 consensus_11434#1 TATTGTTCGCCTATATCATGTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAA 151 consensus_11434#3 CTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATG 151 consensus_11434#4 CTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATG 97 consensus_11434#2 TATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTG 155 * * * * ** * * * consensus_11434#0 GA-AGCTGCACAGAGTAGACCAAA--CAAAGAAAACACTGAAGAATATC--ACGAAATGA 1973 consensus_11434#1 GA-AGCTGCACAGAGTAGACCAAA--CAAAGAAAACACTGAAGAATATC--TCGAAATGA 206 consensus_11434#3 GA-AAAATCCCAAGGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCAT 210 consensus_11434#4 GA-AAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCAT 156 consensus_11434#2 CCCAACTCTTTCTCACGGATGGTGAACCTAGCAA--GCCACCTCTTCTGCTAGAGATGGC 213 * * * * * * * * consensus_11434#0 TGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTT----GGAAGAAAGTAGATGTC 2029 consensus_11434#1 TGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTT----GGAAGAAAGTAGATGTC 262 consensus_11434#3 TGCAAGCCCCAGTGACT--GGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGAC 268 consensus_11434#4 TGCAAGCCCCAGTGACT--GGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGAC 214 consensus_11434#2 ATCTGATCATGAGGATAAAAAATTTATGTA-----AGTCATAAGAAAGGTCTTAAGGCTA 268 ** * * ** *** ** consensus_11434#0 AACTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAAT--- 2086 consensus_11434#1 ATCTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAAT--- 319 consensus_11434#3 AATTTTTTCAT----CTATGG---TAGCTAGTTCGTCA-AATATCTACATCAAAACTTTC 320 consensus_11434#4 AATTTTTTCAT----CTATGG---TAGCTAGTTCGTCA-AATATCTACACCAAAACTTTC 266 consensus_11434#2 ACTTATTATAG-----TAGAACA-TATCTTCTTCGTTCAAACAT-TGTAGTAGAACATAT 321 * * * ** ** * ** * ** ** * * consensus_11434#0 GAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCC-----CATGTGGCGGACAGCATAA 2141 consensus_11434#1 GAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCC-----CATGTGGCGGACAGCATAA 374 consensus_11434#3 GATGGGATTGATGTTGCTGGAAGAAGG--------------TATTGGATGTGATTCAGAA 366 consensus_11434#4 GATGGGATTGATGTTGCTGGAAGAAGGGTTAGCAAATGAAGTATTGGATGTGATTCAGAA 326 consensus_11434#2 TGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTT--CAAGAACCGCATTTTGTAC 379 * * * * * * * * consensus_11434#0 AACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGC 2201 consensus_11434#1 AACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGC 434 consensus_11434#3 GATGGCTGGATTGA--GAAAGATTTCCTTCCTAGCACAT----TCTTTGGG----TGGGT 416 consensus_11434#4 GATGGCTGGATTGA--GAAAGATTTCCTTCCTAGCACAT----TCTTTGGG----TGG-- 374 consensus_11434#2 GCTAAT--GTTTCGTACGACCGTATCCTTCCTTACTCCTA---GTTAGTACCACATGATT 434 * * * * *** * * * * * ** consensus_11434#0 TGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCT 2261 consensus_11434#1 TGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCT 494 consensus_11434#3 TTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGC-AATGAAGGATGCAAGTCA 475 consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 TCCTCTGCCTGATATGCAA--ACGAATTTTTTTTTGCT--CCAAACCATTTTCTATTTTG 490 consensus_11434#0 CTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCA 2321 consensus_11434#1 CTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCA 554 consensus_11434#3 AAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGA------------ 523 consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 CTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCG--------------- 535 consensus_11434#0 ACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACATCCCCTTCTATGTTGAGT 2381 consensus_11434#1 ACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACATCCCCTTCTATGTTGAGT 614 consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTA 2441 consensus_11434#1 TTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTA 674 consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 GCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGT 2501 consensus_11434#1 GCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGT 734 consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 TGAAAATAAATTAGTGAAACATTATTATTA-----AAAAAAA------------------ 2538 consensus_11434#1 TGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAAAGTTAGGTTGCAAAAAAA 794 consensus_11434#3 ------------------------------------------------------------ consensus_11434#4 ------------------------------------------------------------ consensus_11434#2 ------------------------------------------------------------ consensus_11434#0 ---------------- consensus_11434#1 AAAAAAAAAAAAAAAA 810 consensus_11434#3 ---------------- consensus_11434#4 ---------------- consensus_11434#2 ---------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||