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Oryza sativa
cluster # 11438 cluster # 11438       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11438#0 length = 1283 sequences # 4  
consensus_11438#1 length = 941 sequences # 3  
consensus_11438#2 length = 790 sequences # 2  

consensusID : consensus_11438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1283
fasta sequence
                              [ATCCAAGCAAAACCCACCATCCAAACACATCCTCAATGACTAGAGTTCAACGTGAGCTTCTAAAGAAAAGAGAGAAGTTCAACGTGAGCTGCTCCTGTTCACGGGTCCCACGCCCCCACGTCATCACGCGGGCAGGATAAAAAAAACCGACAGCGAAAGTGCGCGATGACGTCACGACAGCGACGCACCACGCATGCTCATCCCCCTACAGTCCCCTCGGCCCACTCATCCCGGCCCAAATAAAAAGCCCATCCGCCGCCTCGCTGTACAGTACCGCGGGGCCCACGCCCCGCACTACGCACGGATCCCGCCGCGCGTCCGACTCAGCGCCCACGCCACGTCCGCACCCACCGCATCTCCACCCACACCCACTGACCTATGGGCCCCACCACCCCACCCCACCCACCGGGCAACACCTGTACCCGCACCGAACAGCGTACTAGTGTACTACTACTACTTGGACCCATCAGACCGACACGTGGGCCCCACAGCAACCGCGCCGTCCACGTGTCACCCTACATGCGCGACGGACCAATGGAAGGGCGCCACGTGGGAGTGTGAACCGTTAGGCGTACACGGCGGTGTGTACACGAGGGGGAGGAGGGGGGTCACCGATTCACCAAACCCTAGGGCCTCCTTTTTTTTTTTTTTTTTCGCTGCTTCGCTTTTTTTGCTGCTGCTGCTGCTGCTGCTTCGTCGCACCGCCCCGAAGCCCTGTGGGATATGGATCCAGAGATACACGACTGATGGTGATAAGCTTCAATACAAGGGCCCAACTGTGACCA-CCACTTTGGGTATGAGCATCGACTCATCGAAAACGCAACACCATGACGACGAGGCCCAGCTTCACAAGAACATTAATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACACACCAGAGGCTTACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTCTTTTTATCTAACCACAACACCCATCATCAAACCAGTGTGTGTTC-TTTTTTAGCAAAAAGCTGTTGTTTTAGTTCTTCTCACAACTCACCGGGGCCCTGTAGAGCTGCCCCCAAATCGCAGCCATATGTATTATTTATGGCTCGTGGCCGAGAAGAAATGAGTTTGTGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAA-CCTAGCG-CTTAGAATTT-TTATGTTTGCTAACATTTGATGAGGGAATGTAACCGCCCAATTCGGTGGCCTGATCGTTTTTATGAAAAAATGTG]

[+] EMBL AY333183             [ATCCAAGCAAAACCCACCATCCAAACACATCCTCAATGACTAGAGTTCAACGTGAGCTTCTAAAGAAAAGAGAGAAGTTCAACGTGAGCTGCTCCTGTTCACGGGTCCCACGCCCCCACGTCATCACGCGGGCAGGATAAAAAAAACCGACAGCGAAAGTGCGCGATGACGTCACGACAGCGACGCACCACGCATGCTCATCCCCCTACAGTCCCCTCGGCCCACTCATCCCGGCCCAAATAAAAAGCCCATCCGCCGCCTCGCTGTACAGTACCGCGGGGCCCACGCCCCGCACTACGCACGGATCCCGCCGCGCGTCCGACTCAGCGCCCACGCCACGTCCGCACCCACCGCATCTCCACCCACACCCACTGACCTATGGGCCCCACCACCCCACCCCACCCACCGGGCAACACCTGTACCCGCACCGAACAGCGTACTAGTGTACTACTACTACTTGGACCCATCAGACCGACACGTGGGCCCCACAGCAACCGCGCCGTCCACGTGTCACCCTACATGCGCGACGGACCAATGGAAGGGCGCCACGTGGGAGTGTGAACCGTTAGGCGTACACGGCGGTGTGTACACGAGGGGGAGGAGGGGGGTCACCGATTCACCAAACCCTAGGGCCTCCTTTTTTTTTTTTTTTTTCGCTGCTTCGCTTTTTTTGCTGCTGCTGCTGCTGCTGCTTCGTCGCACCGCCCCGAAGCCCTGTGGGATATGGATCCAGAGATACACGACTGATGGTGATAAGCTTCAATACAAGGGCCCAACTGTGACCA CCACTTTGGGTATGAGCATCGACTCATCGAAAACGCAACACCATGACGACGAGGCCCAGCTTCACAAGAACATTAATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACACACCAGAGGCTTACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTCTTTTTATCTAACCACAACACCCATCATCAAACCAGTGTGTGTTC TTTTTTAGCAAAAAGCTGTTGTTTTAGTTCTTCTCACAACTCACCGGGGCCCTGTAGAGCTGCCCCCAAATCGCAGCCATATGTATTATTTATGGCTCGTGGCCGAGAAGAAATGAGTTTGTGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAA CCTAGCG CTTAGAATTT TTATGTTTGCTAACATTTGATGAGGGAATGTAACCGCCCAATTCGGTGGCCTGATCGTTTTTATGAA        ]
[+] EMBL AY072932             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGCCCTGTGGGATATGGATCCAGAGATACACGACTGATGGTGATAAGCTTCAATACAAGGGCCCAACTGTGACCACCCACTTT GGTATGAGCATCGACTCATCGAAAACGCAACACCATGACGACGAGGCCCAGCTTCACAAGAACATTAATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACACACCAGAGGCTTACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTCTTTTTATCTAACCACAACACCCATCATCAAACCAGTGTGTGTTC TTTTTTAGCAAAAAGCTGTTGTTTTAGTTCTTCTCACAACTCACCGGGGCCCTGTAGAGCTGCCCCCAAATCGCAGCCATATGTATTATTTATGGCTCGTGGCCGAGAAGAAATGAGTTTGTGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAA CCTAGCG CTTAGAATTT TTATGTTTGCTAACATTTGATGAGGGAATGTAACCGCCCAATTCGGTGGCCTGATCGTTTTTATGAA        ]
[-] EMBL CF324862             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAACACTAATAATAACAGCGACGGGAACTATGTAGGTGGCAGCCACAAACCAGAGGCTAACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTCTTCTTATCTAACCACAACACCCATCATCAAACCAGTGTGTGTTC TTTTTTAGCAAAAAGCTGTTGTTTTAGTTCTTCTCACAACTCACCGGGGCCCTGTAGAGCTGCCCCCAAATCGCAGCCATATGTATTATTTATGGCTCGTTGCCGAGAAGAAATGAGTTTGTGTTCTGTGTTTGTGTGGTGTGTGTTTTGTTAACCGATTGATGTAGCTATTGTAACAAAGCTTAGCGCCTTAGAATTTATTATGTTTGCTACCATTTCATGAGGGAATGTATCCGGCCAATTCGGTGGCTTGATCGGTTTTATGATAAAATGTG]
[+] EMBL BU673561             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CACTAATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACAAACCAGAGGCTAACTCTAGGTGAGAGAGAATCATGAGGAAGTAACGACAAAGATGAGATGAGGTGTTCTTCTTATCTAACCACAACACCCATCATCAAACCAGTGTGTGTTCTTTTTTTAGCAAAAAGCTGTTGTTTTAGTTCTTCTCACAACTCACCGGGGCCCTGTAGAGCTGCCCCCAAATCGCAGCCATATGTATTATTTATGGCTCGTTGCCGAGAAGAAATGAGTTTGTGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAA CCTAGCG CTTAGAATTT TTATGTTTGCTAACATTTGATGAGGGAATGTAACCGGCCAATTCGGTGGCC                        ]


>consensus_11438#0 ATCCAAGCAAAACCCACCATCCAAACACATCCTCAATGACTAGAGTTCAACGTGAGCTTC TAAAGAAAAGAGAGAAGTTCAACGTGAGCTGCTCCTGTTCACGGGTCCCACGCCCCCACG TCATCACGCGGGCAGGATAAAAAAAACCGACAGCGAAAGTGCGCGATGACGTCACGACAG CGACGCACCACGCATGCTCATCCCCCTACAGTCCCCTCGGCCCACTCATCCCGGCCCAAA TAAAAAGCCCATCCGCCGCCTCGCTGTACAGTACCGCGGGGCCCACGCCCCGCACTACGC ACGGATCCCGCCGCGCGTCCGACTCAGCGCCCACGCCACGTCCGCACCCACCGCATCTCC ACCCACACCCACTGACCTATGGGCCCCACCACCCCACCCCACCCACCGGGCAACACCTGT ACCCGCACCGAACAGCGTACTAGTGTACTACTACTACTTGGACCCATCAGACCGACACGT GGGCCCCACAGCAACCGCGCCGTCCACGTGTCACCCTACATGCGCGACGGACCAATGGAA GGGCGCCACGTGGGAGTGTGAACCGTTAGGCGTACACGGCGGTGTGTACACGAGGGGGAG GAGGGGGGTCACCGATTCACCAAACCCTAGGGCCTCCTTTTTTTTTTTTTTTTTCGCTGC TTCGCTTTTTTTGCTGCTGCTGCTGCTGCTGCTTCGTCGCACCGCCCCGAAGCCCTGTGG GATATGGATCCAGAGATACACGACTGATGGTGATAAGCTTCAATACAAGGGCCCAACTGT GACCACCACTTTGGGTATGAGCATCGACTCATCGAAAACGCAACACCATGACGACGAGGC CCAGCTTCACAAGAACATTAATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACAC ACCAGAGGCTTACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGA GGTGTTCTTTTTATCTAACCACAACACCCATCATCAAACCAGTGTGTGTTCTTTTTTAGC AAAAAGCTGTTGTTTTAGTTCTTCTCACAACTCACCGGGGCCCTGTAGAGCTGCCCCCAA ATCGCAGCCATATGTATTATTTATGGCTCGTGGCCGAGAAGAAATGAGTTTGTGTTTTGT GTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAACCTAGCGCT TAGAATTTTTATGTTTGCTAACATTTGATGAGGGAATGTAACCGCCCAATTCGGTGGCCT GATCGTTTTTATGAAAAAATGTG



consensusID : consensus_11438#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 941
fasta sequence
                              [CATCCCGGAGTGGTGACAGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTGACCACAAGGATTCGTCTGCACCTAAGAAAAGGAAATCTGGTAATACATCGGCAGAAGGGATAGATCTTTGGAGTACTCCCCCAGCCTTAGCTGTGCCCGCAGGGCAGGGGGAAGCAAGTCCTGGGTTGGCACTTGCTCGACGTGATGGTGTTGCTCACCTGGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATCTAACAGAGAGTCTGCCAGGAGATCAAGGTTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAGAACAGTGCCCTTCGGTCAGAGCTTGATCAGCTTAAGAAGGCCTGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACAAGGGACCAACTGTGACAACCACTCTGGGTATGAGCATCGACTCATCGAAGACGCAACACCATGACGACGAGGGCCAGCTTCACAAGAACACTAATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACAAACCAGAGGCTAACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTTTTTTTATTTAACCCCAACACCCATCATCAAACCAGTGTGTGTTTTTTTTTAGCAAAAAGCTGTTGTTTTAGTTTTTTTCACAACTCCCCGGGGCCCTGTAGAGCTGCCCCCAAATTGCAGCCATATGTATTATTTATGGCTCGTTG-CCGAGAAGAAATGAGTTTGTGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAACCTAGCGCTTAGAATTTTTATGTTTGCTAACATTTGATGAGGGAATGTAACCGGCCAATTCGGTGGCCTGATC]

[+] EMBL BP184413             [CATCCCGGAGTGGTGACAGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTGACCACAAGGATTCGTCTGCACCTAAGAAAAGGAAATCTGGTAATACATCGGCAGAAGGGATAGATCTTTGGAGTACTCCCCCAGCCTTAGCTGTGCCCGCAGGGCAGGGGGAAGCAAGTCCTGGGTTGGCACTTGCTCGACGTGATGGTGTTGCTCACCTGGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATCTAACAGAGAGTCTGCCAGGAGATCAAGGTTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAGAACAGTGCCCTTCGGTCAGAGCTTGATCAGCTTAAGAAGGCCTGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACAAGGGACCAACTGTGACAACCACTCT GGTATGAGCATCGACTCATCGAAGACGCAACACCATGACGACGAGGGCCAag                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB665130             [                                                                                                                                                                          GAAGCAAGTCCTGGGTTGGCACTTGCTCGACGTGATGGTGTTGCTCACCTGGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATTTAACAGAGAGTCTGCCAGGAGATCAAGGTTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAGAACAGTGCCCTTCGGTCAGAGCTTGATCAGCTTAAGAAGGCCTGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACAAGGGACCAACTGTGACAACCCCTCTGGGTATGAGCATCGACTCATCGAAGACGCAACACCATGACGACGAGGGCCAGCTTCACAAGAACACTAATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACAAACCAGAGGCTAACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTTTTTTTATTTAACCCCAACACCCATCATCAAACCAGTGTGTGTTTTTTTTTAGCAAAAAGCTGTTGTTTTAGTTTTTTTCACAACTCCCCGGGGCCCTGTAGAGCTGCCCCCAAATTGCAGCCATATGTATTATTTATGGCTCGTTG CCGAGAAGAAATGAGTTTGTGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAACCTAGCGCTTAGAATTTTTATGTTTGCTAACATTTGATGAGGGAATGTAACCGGCCAATTCGGTGGCCTGATC]
[-] EMBL CB662916             [                                                                                                                                                                          GAAGCAAGTCCTGGGTTGGCACTTGCTCGACGTGATGGTGTTGCTCACCTGGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATCTAACAGAGAGTCTGCCAGGAGATCAAGGTTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAGAACAGTGCCCTTCGGTCAGAGCTTGATCAGCTTAAGAAGGCCTGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACAAGGGACCAACTGTGACAACCACTCTGGGTATGAGCATCGACTCATCGAAGACGCAACACCATGACGACGAGGGCCAGCTTCTCAAGAACACTTATAATAACAGCAACGGGAACTATGTAGGTGGCAGCCACAAACCAGAGGCTAATTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTCTTCTTATTTAACCACAACACCCATCATCAAACCAGTGTGTGTTGTTTTTTAGCAAAAAGCTGTTGTTTTAGTTTTTGTCACAAATCACTGGGGCCCTGTAGAGGTGCCCCCAAATCGCAGCCATAAGTATTATTTTTGGGTGGTTGTCCGAGAAGAAAg                                                                                                                                           ]


>consensus_11438#1 CATCCCGGAGTGGTGACAGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTG ACCACAAGGATTCGTCTGCACCTAAGAAAAGGAAATCTGGTAATACATCGGCAGAAGGGA TAGATCTTTGGAGTACTCCCCCAGCCTTAGCTGTGCCCGCAGGGCAGGGGGAAGCAAGTC CTGGGTTGGCACTTGCTCGACGTGATGGTGTTGCTCACCTGGATGAGCGTGAATTGAAGA GGGAGAGGCGCAAACAATCTAACAGAGAGTCTGCCAGGAGATCAAGGTTGCGCAAGCAGC AAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAGAACAGTGCCCTTC GGTCAGAGCTTGATCAGCTTAAGAAGGCCTGTGAGGATATGGAAGCAGAGAATACACGAC TGATGGGTGATAAGGCTCAATACAAGGGACCAACTGTGACAACCACTCTGGGTATGAGCA TCGACTCATCGAAGACGCAACACCATGACGACGAGGGCCAGCTTCACAAGAACACTAATA ATAACAGCAACGGGAACTATGTAGGTGGCAGCCACAAACCAGAGGCTAACTTTAGGTGAG AGAGAATCATGAGGAAGTGACGACAAAGATGAGATGAGGTGTTTTTTTTATTTAACCCCA ACACCCATCATCAAACCAGTGTGTGTTTTTTTTTAGCAAAAAGCTGTTGTTTTAGTTTTT TTCACAACTCCCCGGGGCCCTGTAGAGCTGCCCCCAAATTGCAGCCATATGTATTATTTA TGGCTCGTTGCCGAGAAGAAATGAGTTTGTGTTTTGTGTTTGTGTGGTGTGTGTTTTGTA AACCGATTGATGTAGCTATTGTAACAAACCTAGCGCTTAGAATTTTTATGTTTGCTAACA TTTGATGAGGGAATGTAACCGGCCAATTCGGTGGCCTGATC



consensusID : consensus_11438#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 790
fasta sequence
                              [GCCGCCGCGTCGCCTGAGAAGGGAAGCTCCGCGGCGCCCTCTGGGGATGATGCATCCCGGAGTGGTGACAGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTGACCACAAGGATTCGTCTGCACCTAAGAAAAGGAAATCTGGTAATACATCGGCAGAAGGTGAGCCGTCTCAAGCTACGCTTGTGCCCTATGCTGCTGTCGAGTCACCGTATCCGTTGAAGGGGAGGTCTGCGTCGAAGCTTCCAGTTTCTGCACCAGGGCGGGCGGCACTTCCTAATGCCACACCTAATTTGAACATAGGGATAGATCTTTGGAATACTCCCCCAGCCTTAGCTGTGCCCGCAGGGCAGGGGGAAGCAAGTCCTGGGTTGGCACTTGCGCGACGTGATGGTGTTGCTCACCTGGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATCTAACAGAGAGTCTGCCAGGAGATCAAGGTTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAGAACAGTGCCCTTCGGTCAGAGCTTGATCAGGTTAAGAAGGCCTGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACAGGGACCAACTGTGACAACCACTCTGGGGATGAGCATGCGCTGATGAAGACAGCAGACGATGACGACGAGGGCCAGTTTACGGGACGGTCGCGATACGAGATGGGGACTATGGGGGGGGGCGCCACGAAGCGGGAGGTGACTTTAGGTGTGAGG]

[+] EMBL CF324653             [GCCGCCGCGTCGCCTGAGAAGGGAAGCTCCGCGGCGCCCTCTGGGGATGATGCATCCCGGAGTGGTGACAGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTGACCACAAGGATTCGTCTGCACCTAAGAAAAGGAAATCTGGTAATACATCGGCAGAAGGTGAGCCGTCTCAAGCTACGCTTGTGCCCTATGCTGCTGTCGAGTCACCGTATCCGTTGAAGGGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA757353             [                                                                                                                                                                                  CTCAAGCTACGCTTGTGCCCTATGCTGCTGTCGAGTCACCGTATCCGTTGAAGGGGAGGTCTGCGTCGAAGCTTCCAGTTTCTGCACCAGGGCGGGCGGCACTTCCTAATGCCACACCTAATTTGAACATAGGGATAGATCTTTGGAATACTCCCCCAGCCTTAGCTGTGCCCGCAGGGCAGGGGGAAGCAAGTCCTGGGTTGGCACTTGCGCGACGTGATGGTGTTGCTCACCTGGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATCTAACAGAGAGTCTGCCAGGAGATCAAGGTTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAGAACAGTGCCCTTCGGTCAGAGCTTGATCAGGTTAAGAAGGCCTGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACAGGGACCAACTGTGACAACCACTCTGGGGATGAGCATGCGCTGATGAAGACAGCAGACGATGACGACGAGGGCCAGTTTACGGGACGGTCGCGATACGAGATGGGGACTATGGGGGGGGGCGCCACGAAGCGGGAGGTGACTTTAGGTGTGAGG]


>consensus_11438#2 GCCGCCGCGTCGCCTGAGAAGGGAAGCTCCGCGGCGCCCTCTGGGGATGATGCATCCCGG AGTGGTGACAGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTGACCACAAG GATTCGTCTGCACCTAAGAAAAGGAAATCTGGTAATACATCGGCAGAAGGTGAGCCGTCT CAAGCTACGCTTGTGCCCTATGCTGCTGTCGAGTCACCGTATCCGTTGAAGGGGAGGTCT GCGTCGAAGCTTCCAGTTTCTGCACCAGGGCGGGCGGCACTTCCTAATGCCACACCTAAT TTGAACATAGGGATAGATCTTTGGAATACTCCCCCAGCCTTAGCTGTGCCCGCAGGGCAG GGGGAAGCAAGTCCTGGGTTGGCACTTGCGCGACGTGATGGTGTTGCTCACCTGGATGAG CGTGAATTGAAGAGGGAGAGGCGCAAACAATCTAACAGAGAGTCTGCCAGGAGATCAAGG TTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGAACTGACAACTGAG AACAGTGCCCTTCGGTCAGAGCTTGATCAGGTTAAGAAGGCCTGTGAGGATATGGAAGCA GAGAATACACGACTGATGGGTGATAAGGCTCAATACAGGGACCAACTGTGACAACCACTC TGGGGATGAGCATGCGCTGATGAAGACAGCAGACGATGACGACGAGGGCCAGTTTACGGG ACGGTCGCGATACGAGATGGGGACTATGGGGGGGGGCGCCACGAAGCGGGAGGTGACTTT AGGTGTGAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11438#1      ------------------------------------------------------------
consensus_11438#2      ------------------------------------------------------------
consensus_11438#0      ATCCAAGCAAAACCCACCATCCAAACACATCCTCAATGACTAGAGTTCAACGTGAGCTTC 60
                                                                                   

consensus_11438#1      ------------------------------------------------------------
consensus_11438#2      ---------------------------------------------------GCCGCCGCG 9
consensus_11438#0      TAAAGAAAAGAGAGAAGTTCAACGTGAGCTGCTCCTGTTCACGGGTCCCACGCCCCCACG 120
                                                                                   

consensus_11438#1      -------------------------------------------CATCCCGGAGTGGTGAC 17
consensus_11438#2      TCGCCTGAGAAGGGAAGCTCCGCGGCGCCCTCTGGGGATGATGCATCCCGGAGTGGTGAC 69
consensus_11438#0      TCATC--ACGCGGGCAGGATAAAAAAAACCGACAGCGAAAGTGCGCGATGACGTCACGAC 178
                                                                  *     *  **   ***

consensus_11438#1      AGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTGACCACAAGGATTCGTCT 77
consensus_11438#2      AGTGGCAGCGAGGAGTCGTCTGATACTAGAGATGATGACACTGACCACAAGGATTCGTCT 129
consensus_11438#0      AGCGAC-GCACCACGCATGCTCATCCCCCTACAGTCCCCTCGGCCCACTCATCCCGGCCC 237
                       ** * * **     *    ** ** *       *    * * * ****        * * 

consensus_11438#1      GCACCTAAGA---AAAGGAAATCTGGTAATACATCGGCAGAAGG---------------- 118
consensus_11438#2      GCACCTAAGA---AAAGGAAATCTGGTAATACATCGGCAGAAGGTGAGCCGTCTCAAGCT 186
consensus_11438#0      AAATAAAAAGCCCATCCGCCGCCTCGCTGTACAGTACCGCGGGGCCCAC-GCCCCGCACT 296
                         *   **     *   *    ** *   ****    *    **                

consensus_11438#1      ------------------------------------------------------------
consensus_11438#2      ACGCTTGTGCCCTATGCTGCTGTCGAGTCACCGTATCCGTTGAAGGGGAGGTC--TGCGT 244
consensus_11438#0      ACGCACGGATCCCGCCGCGCGTCCGACTCAGCGCCCACGCCACGTCCGCACCCACCGCAT 356
                                                                                   

consensus_11438#1      ------------------------------------------------------------
consensus_11438#2      CGAAGCTTCCAGTTTCTGCACCAGGGCGGGCGGCACTTC--CTAATGCCACACCTAATTT 302
consensus_11438#0      CTCCACCCACACCCACTGACCTATGGGCCCCACCACCCCACCCCACCCACCGGGCAACAC 416
                                                                                   

consensus_11438#1      ---------GATAGATCTTTGGAGTACTCCCCCAGCCTTAGCTGTGCCCG-CAG---GGC 165
consensus_11438#2      GAACATAGGGATAGATCTTTGGAATACTCCCCCAGCCTTAGCTGTGCCCG-CAG---GGC 358
consensus_11438#0      CTGTACCCGCACCGAACAGCGTACTAGTGTACTACTACTACTTGGACCCATCAGACCGAC 476
                                 *  ** *   * * ** *   * *    **  **  ***  ***   * *

consensus_11438#1      AGGGGGAAGCAAGTCCTGGGTTGGCACTTGCTCGACGTGATG---GTGTTGCTCACC--T 220
consensus_11438#2      AGGGGGAAGCAAGTCCTGGGTTGGCACTTGCGCGACGTGATG---GTGTTGCTCACC--T 413
consensus_11438#0      ACGTGGGCCCCACAGCAACCGCGCCGTCCACGTGTCACCCTACATGCGCGACGGACCAAT 536
                       * * **   * *   *      * *     *  * *    *    * *   *  ***  *

consensus_11438#1      GGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATCTA--ACAGAGAGTCTGCCAGG 278
consensus_11438#2      GGATGAGCGTGAATTGAAGAGGGAGAGGCGCAAACAATCTA--ACAGAGAGTCTGCCAGG 471
consensus_11438#0      GGAAGGGCGCCACGTGG-GAGTGTGAACCGTTAGGCGTACACGGCGGTGTGTACACGAGG 595
                       *** * ***  *  **  *** * **  **  *    *  *   * * * **   * ***

consensus_11438#1      AGATCAAGG----TTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGA 334
consensus_11438#2      AGATCAAGG----TTGCGCAAGCAGCAAGAGTGTGAGGAACTAGCTCGGAAGGTTGCTGA 527
consensus_11438#0      GGGAGGAGGGGGGTCACCGATTCACCAAACCCTAGGGCCTCCTTTTTTTTTTTTTTTTTC 655
                        *    ***    *  *  *  ** ***      * *   *    *       **  *  

consensus_11438#1      ACTGACA-ACTGAGAACAGTGCC-CTTCGGTCAGAGCTTGATCAGCTTAA---GAAGGCC 389
consensus_11438#2      ACTGACA-ACTGAGAACAGTGCC-CTTCGGTCAGAGCTTGATCAGGTTAA---GAAGGCC 582
consensus_11438#0      GCTGCTTCGCTTTTTTTGCTGCTGCTGCTGCTGCTGCTTCGTCGCACCGCCCCGAAGCCC 715
                        ***     **        ***  ** * *     ****  **          **** **

consensus_11438#1      TGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACAAGGGA 449
consensus_11438#2      TGTGAGGATATGGAAGCAGAGAATACACGACTGATGGGTGATAAGGCTCAATACA-GGGA 641
consensus_11438#0      TGTG-GGATATGGATCCAGAGA-TACACGACTGATGG-TGATAAGCTTCAATACAAGGGC 772
                       **** *********  ****** ************** *******  ******** *** 

consensus_11438#1      CCAACTGTGACAACCACTCTGGGTATGAGCATCGACTCATCGAAGACGCAACACCATGAC 509
consensus_11438#2      CCAACTGTGACAACCACTCTGGGGATGAGCATGCGCTGAT-GAAGACAGCAGACGATGAC 700
consensus_11438#0      CCAACTGTGACCACCACTTTGGGTATGAGCATCGACTCATCGAAAACGCAACACCATGAC 832
                       *********** ****** **** ********   ** ** *** **   * ** *****

consensus_11438#1      GACGAGGGCCAGCTTCACAAGAACACTAATAATAACAGCAACGGGAACTATGTAGGTGGC 569
consensus_11438#2      GACGAGGGCCAGTTT-ACGGGA-CGGTCGCGATACGAG--ATGGGGACTATGGGGGGGGG 756
consensus_11438#0      GACGAGGCCCAGCTTCACAAGAACATTAATAATAACAGCAACGGGAACTATGTAGGTGGC 892
                       ******* **** ** **  ** *  *    ***  **  * *** ******  ** ** 

consensus_11438#1      AGCCACAAACCAGAGGCTAACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGA 629
consensus_11438#2      CGCCACGAAGCGGGAGGTGACTTTAGGTGTGAGG-------------------------- 790
consensus_11438#0      AGCCACACACCAGAGGCTTACTTTAGGTGAGAGAGAATCATGAGGAAGTGACGACAAAGA 952
                        *****  * * *  * * ********** ***                           

consensus_11438#1      TGAGATGAGGTGTTTTTTTTATTTAACCCCAACACCCATCATCAAACCAGTGTGTGTTTT 689
consensus_11438#2      ------------------------------------------------------------
consensus_11438#0      TGAGATGAGGTGTTCTTTTTATCTAACCACAACACCCATCATCAAACCAGTGTGTGTTCT 1012
                                                                                   

consensus_11438#1      TTTTTAGCAAAAAGCTGTTGTTTTAGTTTTTTTCACAACTCCCCGGGGCCCTGTAGAGCT 749
consensus_11438#2      ------------------------------------------------------------
consensus_11438#0      TTTTTAGCAAAAAGCTGTTGTTTTAGTTCTTCTCACAACTCACCGGGGCCCTGTAGAGCT 1072
                                                                                   

consensus_11438#1      GCCCCCAAATTGCAGCCATATGTATTATTTATGGCTCGTTGCCGAGAAGAAATGAGTTTG 809
consensus_11438#2      ------------------------------------------------------------
consensus_11438#0      GCCCCCAAATCGCAGCCATATGTATTATTTATGGCTCGTGGCCGAGAAGAAATGAGTTTG 1132
                                                                                   

consensus_11438#1      TGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAAC 869
consensus_11438#2      ------------------------------------------------------------
consensus_11438#0      TGTTTTGTGTTTGTGTGGTGTGTGTTTTGTAAACCGATTGATGTAGCTATTGTAACAAAC 1192
                                                                                   

consensus_11438#1      CTAGCGCTTAGAATTTTTATGTTTGCTAACATTTGATGAGGGAATGTAACCGGCCAATTC 929
consensus_11438#2      ------------------------------------------------------------
consensus_11438#0      CTAGCGCTTAGAATTTTTATGTTTGCTAACATTTGATGAGGGAATGTAACCGCCCAATTC 1252
                                                                                   

consensus_11438#1      GGTGGCCTGATC------------------- 941
consensus_11438#2      -------------------------------
consensus_11438#0      GGTGGCCTGATCGTTTTTATGAAAAAATGTG 1283
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)