cluster # 11476

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Oryza sativa
cluster # 11476 cluster # 11476 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11476#0 length = 1375 sequences # 2
consensus_11476#1 length = 1313 sequences # 2

consensus_11476#2 length = 1179 sequences # 2
consensus_11476#3 length = 781 sequences # 2
consensus_11476#4 length = 423 sequences # 1

consensusID : consensus_11476#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1375
fasta sequence

                              [TAGTCGATCTCCCCGTCGCTTCGGTCTCGACTCCTCGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGGTGAGCACACTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAGAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTGCTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGA-GGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCA-AGGGACAGCAGGAG-CCCA-ATGAGAGCT-GACAGCCGTAGCCCTGCTGA-CCATGAG-CGCCG-TGACATGAGTACAGCTGCCA-ATGGCCGGAG-CCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGC-GCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCA-ATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCGCGGTTTCTGGAAAAAAA]

[+] EMBL AK071635             [TAGTCGATCTCCCCGTCGCTTCGGTCTCGACTCCTCGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGGTGAGCACACTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAGAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTGCTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGA GGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCA AGGGACAGCAGGAG CCCA ATGAGAGCT GACAGCCGTAGCCCTGCTGA CCATGAG CGCCG TGACATGAGTACAGCTGCCA ATGGCCGGAG CCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGC GCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCA ATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCG                 ]
[+] EMBL BI808860             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACGGGAGGGAACC CAGCCCTACCCCTAATGCCA CAGGAGTCC GCACCACAGGGACACCA GAGCCCCACATGAGAGCTGGACAACCGTA CCCTGCTGACCCATGAGCCGCCGTTGACATGAGTACAGCTGCCACAT GCC GAGCCCCAAG CCCAGGGATTATGAAGACAAT GCAATCATC GGCCTCGCCTAGAGGAAGCGGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCACATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCCCCGCGGTTTCTGGAAAAAAA]




>consensus_11476#0
TAGTCGATCTCCCCGTCGCTTCGGTCTCGACTCCTCGTCTCCTCGGCCGCCGCCGCCGCC
GCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTG
CTTCTCCCGTCGGACCCTCGCCGGTGAGCACACTTCAAGATGCCTCGCTATGATGACCGT
GATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCG
CGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTG
GATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCA
AGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAA
GGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGT
TCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGA
GACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAGAGGGACTGCCGG
AACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTGCTCAAGATCCCCATCCCCTCGTCGT
GGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAG
TCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGC
CCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGC
CCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGC
CCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGC
AGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCT
GACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGAT
TATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGA
GGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATC
AATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATC
TGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTG
TACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCGCGGTTTCTGGAAAAAAA

consensusID : consensus_11476#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1313
fasta sequence

                              [CGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCG]

[+] EMBL AK060171             [CGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCG]
[+] EMBL CB677229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGT                                     ]




>consensus_11476#1
CGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAG
CAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCT
CGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTA
GGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGG
AGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGG
GATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATT
GTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGA
GGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGT
GACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATA
GAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCC
CCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGC
TACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCT
CGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCC
CGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCT
CGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCT
ACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGAC
AGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGC
CCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCA
TCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCT
TAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTG
GGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCAT
GCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCG

consensusID : consensus_11476#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1179
fasta sequence

                              [CGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGNCCCTGNGAGGGATCACGTGAATATATGGGCAGAGGNACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGGTATGGAAAGGAGGATATCATTTCCTTGATTTCAACATGGGAATCTCTTACTTATCTTATATGTGATCATTATTAATTTTAGCAGTCATGATCTTCCTATTGAGTCCTGAATGTATGTTGATTCATGTTGATTTTGCTAGGACTGGTTAATTGATTTATACTTGCCAAAAACTAATCTATTGGATGTTAACCCGAAAGTCTCCCGATCACTCTTATAAAACTGAGTTCCTCAGTTGCTTAATCTCTCCCCCTAATCCTCATGTTCTGCTTAATTGGTATCAAACACTGATGGCCTCCTCCATTTCGTTTTGACCACCCGCTCCCCGTTTCCAAGGGAGGGGATCCCCCTAATTACCCGACCCTCCCGGACCCCCCTCCCCACAGTTNCGAGCCCCTAGGGGAACCCCCCCTTCACCTTCCCCCCCCTTGGGGGGACCCCCCCCTCCACCCCTCCCCACCCTTAAGGGGAACCCCTTCCCCACCCCCCANAAGCCCTTATGGGACACCCCCCCCTCAATCCCCANACCC]

[+] EMBL AU162167             [CGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGNCCCTGNGAGGGATCACGTGAATATATGGGCAGAGGNACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA753689             [                                                                                                                                                                                                                                                                                                                                                                                          ggGGGATCACGTGAATATATGGGCAGAGG ACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGGTATGGAAAGGAGGATATCATTTCCTTGATTTCAACATGGGAATCTCTTACTTATCTTATATGTGATCATTATTAATTTTAGCAGTCATGATCTTCCTATTGAGTCCTGAATGTATGTTGATTCATGTTGATTTTGCTAGGACTGGTTAATTGATTTATACTTGCCAAAAACTAATCTATTGGATGTTAACCCGAAAGTCTCCCGATCACTCTTATAAAACTGAGTTCCTCAGTTGCTTAATCTCTCCCCCTAATCCTCATGTTCTGCTTAATTGGTATCAAACACTGATGGCCTCCTCCATTTCGTTTTGACCACCCGCTCCCCGTTTCCAAGGGAGGGGATCCCCCTAATTACCCGACCCTCCCGGACCCCCCTCCCCACAGTTNCGAGCCCCTAGGGGAACCCCCCCTTCACCTTCCCCCCCCTTGGGGGGACCCCCCCCTCCACCCCTCCCCACCCTTAAGGGGAACCCCTTCCCCACCCCCCANAAGCCCTTATGGGACACCCCCCCCTCAATCCCCANACCC]




>consensus_11476#2
CGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGG
TGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGAT
CGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGC
ACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGAT
ATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGG
TACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGG
GTTCCACGTGGNCCCTGNGAGGGATCACGTGAATATATGGGCAGAGGNACCACCACCTGG
TTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGG
AGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCG
GAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCG
TGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGGTATGGAAA
GGAGGATATCATTTCCTTGATTTCAACATGGGAATCTCTTACTTATCTTATATGTGATCA
TTATTAATTTTAGCAGTCATGATCTTCCTATTGAGTCCTGAATGTATGTTGATTCATGTT
GATTTTGCTAGGACTGGTTAATTGATTTATACTTGCCAAAAACTAATCTATTGGATGTTA
ACCCGAAAGTCTCCCGATCACTCTTATAAAACTGAGTTCCTCAGTTGCTTAATCTCTCCC
CCTAATCCTCATGTTCTGCTTAATTGGTATCAAACACTGATGGCCTCCTCCATTTCGTTT
TGACCACCCGCTCCCCGTTTCCAAGGGAGGGGATCCCCCTAATTACCCGACCCTCCCGGA
CCCCCCTCCCCACAGTTNCGAGCCCCTAGGGGAACCCCCCCTTCACCTTCCCCCCCCTTG
GGGGGACCCCCCCCTCCACCCCTCCCCACCCTTAAGGGGAACCCCTTCCCCACCCCCCAN
AAGCCCTTATGGGACACCCCCCCCTCAATCCCCANACCC

consensusID : consensus_11476#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 781
fasta sequence

                              [GATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACC-AAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATGAGTTGATAGACCATGCCATCTGTTGGTTGTACTAAAAAAAAGA]

[-] EMBL CB677230             [GATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACC AAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATGAGTTGATAGACCATGCCATCTGTTGGTTGTACTAAAAAAAAGA]
[+] EMBL C98454               [                                                                                                                                                                                                                                                                                                                                                                                                                     nCAGGAGTCATGCACCAAAGGNACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTANAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGAaaaaaa                                                                      ]




>consensus_11476#3
GATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGA
ATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTG
GTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGG
ATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCC
CCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCC
CTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTG
CTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCAC
CAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCC
GTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATG
GCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCC
CTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGT
TGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTG
TTATTGACGCCTTTCATGAGTTGATAGACCATGCCATCTGTTGGTTGTACTAAAAAAAAG
A

consensusID : consensus_11476#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 423
fasta sequence

                              [TATGAAGCATGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGATGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCATAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGGAAACAGCCCTTAAGAAATCTCCAAAGCGTTGGGAAAGAAGCTTACTCCAAGAATCCCCCATCCCCCCTCCGTTCCCGTTGGGGGTAAGGAAACCCCGTTGGGTTTGGAACCCTTCCCGGCCAGG]

[+] EMBL AA754135             [TATGAAGCATGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGATGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCATAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGGAAACAGCCCTTAAGAAATCTCCAAAGCGTTGGGAAAGAAGCTTACTCCAAGAATCCCCCATCCCCCCTCCGTTCCCGTTGGGGGTAAGGAAACCCCGTTGGGTTTGGAACCCTTCCCGGCCAGG]




>consensus_11476#4
TATGAAGCATGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGATGCAAG
GTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGG
GGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCATAGGACCACCACCTGGTTC
TGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGA
CTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGGA
AACAGCCCTTAAGAAATCTCCAAAGCGTTGGGAAAGAAGCTTACTCCAAGAATCCCCCAT
CCCCCCTCCGTTCCCGTTGGGGGTAAGGAAACCCCGTTGGGTTTGGAACCCTTCCCGGCC
AGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11476#0      TAGTCGATCTCCCCGTCGCTTCGGTCTCGACTCCTCGTCTCCTCGGCCGCCGCCGCCGCC 60
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      ---------------------------------------------CGTCTCCTCGGCCGC 15
consensus_11476#2      ------------------------------------------------------------
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      GCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTG 120
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      CGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGC 75
consensus_11476#2      ------------------------------------------------------------
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      CTTCTCCCGTCGGACCCTCGCCGGTGAGCACACTTCAAGATGCCTCGCTATGATGACCGT 180
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      CGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGT 135
consensus_11476#2      ------------------------------------------------------------
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      GATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCG 240
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      GATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCG 195
consensus_11476#2      ------------------------------------------------------------
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      CGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTG 300
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      CGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTG 255
consensus_11476#2      ------------------------------------------------------------
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      GATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCA 360
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      GATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCA 315
consensus_11476#2      ------------------------------------------------------------
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      AGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAA 420
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      AGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAA 375
consensus_11476#2      ------------------------------------------------------------
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      GGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGT 480
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      GGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGT 435
consensus_11476#2      --------------------------------------CGCCGCCGCCGCCGCCGAGCAG 22
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      TCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGA 540
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      TCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGA 495
consensus_11476#2      AGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGAC 82
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      GACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAGAGGGACTGCCGG 600
consensus_11476#3      -------------GATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGG 47
consensus_11476#1      GACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGG 555
consensus_11476#2      CCTCGCCGTTCAAGATGCC-TCGCTATGATGACCGTGATCGCTACGA---TGACCGTTAC 138
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      AACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTGCTCAAGATCCCCATCCCCTCGTCGT 660
consensus_11476#3      AACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGT 107
consensus_11476#1      AACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGT 615
consensus_11476#2      GGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTT 198
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      GGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTA-GCAGGAGCTACAGCCGCTCCCA 719
consensus_11476#3      GGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTA-GCAGGAGCTACAGCCGCTCCCA 166
consensus_11476#1      GGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTA-GCAGGAGCTACAGCCGCTCCCA 674
consensus_11476#2      GAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCA 258
consensus_11476#4      -----------------------------------------TATGAAGCATGAGTTTGCA 19
                                                                   *   **   * *  **

consensus_11476#0      GTCTCCAAGG--AGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGG 777
consensus_11476#3      GTCTCCAAGG--AGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGG 224
consensus_11476#1      GTCTCCAAGG--AGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGG 732
consensus_11476#2      TTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGG 318
consensus_11476#4      TTTGTTGAATTTAGTGATGCTCGGGATGCTGATGATGCAAGGTACAACCTGGATGGTCGG 79
                        *     *    ** ***   **  ***         *****  *   *  **  *****

consensus_11476#0      AGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCC-CTAGGGGGAGCCCCCGTGACAGT-- 834
consensus_11476#3      AGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCC-CTAGGGGGAGCCCCCGTGACAGT-- 281
consensus_11476#1      AGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCC-CTAGGGGGAGCCCCCGTGACAGT-- 789
consensus_11476#2      GACTTTGATGGAAGCCGC-ATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGNCCCTG 377
consensus_11476#4      GACTTTGATGGAAGCCGC-ATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCC--- 135
                         *  *   ******* *  ***  ** *      ***  ***   ** ****       

consensus_11476#0      CGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCC--CTAGGGGAAGCCCTCGTGATA 892
consensus_11476#3      CGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCC--CTAGGGGAAGCCCTCGTGATA 339
consensus_11476#1      CGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCC--CTAGGGGAAGCCCTCGTGATA 847
consensus_11476#2      NGAGGGATCACGTGAATATATGGGCAGAGGNACCACCACCTGGTTCTGGCCGCTGCTTTA 437
consensus_11476#4      TGGAGGATCACGTGAATATATGGGCATAGGA-CCACCACCTGGTTCTGGCCGCTGCTTTA 194
                        *  *    * * * *    * *  * *       **  ** *     ***   *   **

consensus_11476#0      GCCGCAGCCCTAGGAGA-----AGTGCTTCACCACCCAACGGGAG----GAACCGCAGCC 943
consensus_11476#3      GCCGCAGCCCTAGGAGA-----AGTGCTTCACCACCCAACGGGAG----GAACCGCAGCC 390
consensus_11476#1      GCCGCAGCCCTAGGAGA-----AGTGCTTCACCACCCAACGGGAG----GAACCGCAGCC 898
consensus_11476#2      ACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGAT 497
consensus_11476#4      ACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGAT 254
                        * *  *   *    *       *  * * **  *  * * ****    ***   ***  

consensus_11476#0      CTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAG-AGCT 1002
consensus_11476#3      CTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAG-AGCT 449
consensus_11476#1      CTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAG-AGCT 957
consensus_11476#2      GCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGG--AACAGCCCT--AAG 553
consensus_11476#4      GCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGGAAACAGCCCTTAAGA 314
                            * *  **    **** * * *  *  ******* ** **    **          

consensus_11476#0      GACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGG 1062
consensus_11476#3      GACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGG 509
consensus_11476#1      GACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGG 1017
consensus_11476#2      AATCTC--AAGCGT---GGAAGAAGCT-ACTC-AAGA--TCCCCATCCCCTCGTCGTGGG 604
consensus_11476#4      AATCTCCAAAGCGTTGGGAAAGAAGCTTACTCCAAGAATCCCCCATCCCCCCTCCGTTCC 374
                        *   *   ***       *  * *    *    * *      ** *  *     *    

consensus_11476#0      AGCCCAAGCCCCAGGGATTATGAAGACAATGGCAAT-----CATCGGGCCTCGCCTAGAG 1117
consensus_11476#3      AGCCCAAGCCCCAGGGATTATGAAGACAATGGCAAT-----CATCGGGCCTCGCCTAGAG 564
consensus_11476#1      AGCCCAAGCCCCAGGGATTATGAAGACAATGGCAAT-----CATCGGGCCTCGCCTAGAG 1072
consensus_11476#2      AGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGGTATGGAAAGGAG 664
consensus_11476#4      CGTTGG-GGGTAAGGAAACCCCGTTGGGTTTGGAAC---CCTTCCCGGCCAGG------- 423
                        *     *    ***                * *          * **    *       

consensus_11476#0      GAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGT 1177
consensus_11476#3      GAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGT 624
consensus_11476#1      GAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGT 1132
consensus_11476#2      GATAT-CATTTCCTTGATTTCAACATGGGAATCTCTTACTTATCTTATATGTGATCAT-T 722
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      ATCAGTCTTAAAGTTTATGAAT---CAATTTAAACCTGTTGGAGATTTTAGTCATATCTA 1234
consensus_11476#3      ATCAGTCTTAAAGTTTATGAAT---CAATTTAAACCTGTTGGAGATTTTAGTCATATCTA 681
consensus_11476#1      ATCAGTCTTAAAGTTTATGAAT---CAATTTAAACCTGTTGGAGATTTTAGTCATATCTA 1189
consensus_11476#2      ATTAATTTTAGCAGTCATGATCTTCCTATTGAGTCCTGAATGTATGTTGATTCATGT--- 779
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      TGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGT 1294
consensus_11476#3      TGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATGAGT 741
consensus_11476#1      TGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGT 1249
consensus_11476#2      TGATTTTGCTAGGACT--GGTTAAT-TGATTTATACTTGCCAAAAAC-TAATCTATTGGA 835
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      TGATAGACC--ATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGC 1352
consensus_11476#3      TGATAGACC--ATGCCATCTGTTGGTTGTACTAAAAAAAAGA------------------ 781
consensus_11476#1      TGATAGACC--ATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGC 1307
consensus_11476#2      TGTTAACCCGAAAGTCTCCCGATCACTCTTATAAAACTGAGTTCCTCAGTTGCTTAATCT 895
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      CCACCGCGGTTTCTGGAAAAAAA------------------------------------- 1375
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      CCACCG------------------------------------------------------ 1313
consensus_11476#2      CTCCCCCTAATCCTCATGTTCTGCTTAATTGGTATCAAACACTGATGGCCTCCTCCATTT 955
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      ------------------------------------------------------------
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      ------------------------------------------------------------
consensus_11476#2      CGTTTTGACCACCCGCTCCCCGTTTCCAAGGGAGGGGATCCCCCTAATTACCCGACCCTC 1015
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      ------------------------------------------------------------
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      ------------------------------------------------------------
consensus_11476#2      CCGGACCCCCCTCCCCACAGTTNCGAGCCCCTAGGGGAACCCCCCCTTCACCTTCCCCCC 1075
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      ------------------------------------------------------------
consensus_11476#3      ------------------------------------------------------------
consensus_11476#1      ------------------------------------------------------------
consensus_11476#2      CCTTGGGGGGACCCCCCCCTCCACCCCTCCCCACCCTTAAGGGGAACCCCTTCCCCACCC 1135
consensus_11476#4      ------------------------------------------------------------
                                                                                   

consensus_11476#0      --------------------------------------------
consensus_11476#3      --------------------------------------------
consensus_11476#1      --------------------------------------------
consensus_11476#2      CCCANAAGCCCTTATGGGACACCCCCCCCTCAATCCCCANACCC 1179
consensus_11476#4      --------------------------------------------