These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11497#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1272 fasta sequence [CAACGCCTCACGAACTCCGCGCGCTTCCCCTCCTCGCCGCCGCCGCCGCGGCGTGGGAGAATGAAGGCCATCGGTAGCGGCGGCGAGTGGTGGTGGAACCTCCCGTCCCTCCGCCGCAAGCCCGACCGGCGCCGCCGCGGCCGGCGGA-ACACGGACCCGCGCGGCCGGCGCCGCGGT-CCCCCACCGGAGCCGCTGTCGTCGTCGTCGTCGGAGTCCATCGGCCAAAGCCGCGGCTGGCCCATCGACTTCCCGTTCACGCAGGCCGTGACCGCCGCCTCTCTCACGCTTACGGGTGACACCATCGCGCAGGTCCGCCAGCGCATCGTCGACCGCCGCCTCCGCGGCCCCGAACCAGACAGCAAGGGTTTGGTACCGGACTTGTTGATGAGCCATGATTGGCTACGCGCGCTTCGTATGGCTTCATATGGATTTCTTCTTTATGGTCCGGGATCGCACGCATGGTACCAGTTCCTTGATCAGTGTATGCCGAAGCCAACATTTGCAAATCTATCCACTAAGGTCATACTGAACCAGATTGCGCTTGGTCCTTGTGTTATTGGTGTAATTTTTGCCTGGAATAACTTATGGATAGGGAAACTGTCAGAACTTCCATCTAAATATCGGAATGATGCCCTTCCTACACTTCTTTTTGGGTTTAGATTTTGGATTCCTGTATCGATCATTAACTTTTGGATGGTTCCTTTGTCTGCTCGTGTTGCCTTCATGTCCTCTTGTGCCATTTTTTGGAACTTCTACCTGTCAACCACTATGAGCAAGTGAAACCTCTAGTATACCTTCAGGGCATGTACAAGCCTCATTTGTCATGATACATGTGGTTCCGTAGCAAATGTTTTGCTTGGGTTATTGTGGGACTAAATGAACTGCTACGGATGAGGGTTTGAAGGAGCTAATTTTTGCTCTGGTGGTAGAGTACATGGTAGAGTCACCTCACCTCCTGTGGACAATTCTGTCGCCTGCCTCGTCATTGACGGAATTCTGGTAGTGGTCTCGAGGACAAAGTCGATGGAGAAAGAAATTGTGTTTCTCTAAACATGTGTGAGCCATCTACCATCTACCTCTAATTTGATAGGAAAGATGCTTGTAATTTTGATCATTTGTTCAATAAG-CTAAACTTGTATGCAAG-TACATACCGATACCCAGACT-CTGAATAGAAGCACATTATTCAGATGGAGCAATTTTCACTTGTATTCCTTGCGTTTGGTTTTGAAGTTTTGAACTCAGCTGCAGAGGCTTTTTTTTAAAAAAAAAAAA] [+] EMBL AK070733 [CAACGCCTCACGAACTCCGCGCGCTTCCCCTCCTCGCCGCCGCCGCCGCGGCGTGGGAGAATGAAGGCCATCGGTAGCGGCGGCGAGTGGTGGTGGAACCTCCCGTCCCTCCGCCGCAAGCCCGACCGGCGCCGCCGCGGCCGGCGGA ACACGGACCCGCGCGGCCGGCGCCGCGGT CCCCCACCGGAGCCGCTGTCGTCGTCGTCGTCGGAGTCCATCGGCCAAAGCCGCGGCTGGCCCATCGACTTCCCGTTCACGCAGGCCGTGACCGCCGCCTCTCTCACGCTTACGGGTGACACCATCGCGCAGGTCCGCCAGCGCATCGTCGACCGCCGCCTCCGCGGCCCCGAACCAGACAGCAAGGGTTTGGTACCGGACTTGTTGATGAGCCATGATTGGCTACGCGCGCTTCGTATGGCTTCATATGGATTTCTTCTTTATGGTCCGGGATCGCACGCATGGTACCAGTTCCTTGATCAGTGTATGCCGAAGCCAACATTTGCAAATCTATCCACTAAGGTCATACTGAACCAGATTGCGCTTGGTCCTTGTGTTATTGGTGTAATTTTTGCCTGGAATAACTTATGGATAGGGAAACTGTCAGAACTTCCATCTAAATATCGGAATGATGCCCTTCCTACACTTCTTTTTGGGTTTAGATTTTGGATTCCTGTATCGATCATTAACTTTTGGATGGTTCCTTTGTCTGCTCGTGTTGCCTTCATGTCCTCTTGTGCCATTTTTTGGAACTTCTACCTGTCAACCACTATGAGCAAGTGAAACCTCTAGTATACCTTCAGGGCATGTACAAGCCTCATTTGTCATGATACATGTGGTTCCGTAGCAAATGTTTTGCTTGGGTTATTGTGGGACTAAATGAACTGCTACGGATGAGGGTTTGAAGGAGCTAATTTTTGCTCTGGTGGTAGAGTACATGGTAGAGTCACCTCACCTCCTGTGGACAATTCTGTCGCCTGCCTCGTCATTGACGGAATTCTGGTAGTGGTCTCGAGGACAAAGTCGATGGAGAAAGAAATTGTGTTTCTCTAAACATGTGTGAGCCATCTACCATCTACCTCTAATTTGATAGGAAAGATGCTTGTAATTTTGATCATTTGTTCAATAAG CTAAACTT ] [+] EMBL OSC391 [ CGCGCGCTTCCCCTCCTCGCCGCCGCCGCCGCGTNGNGNGAGAATGAAGGCCATCGGTAGCGGCGGCGAGTGGTGGTGGAACCTCCCGTCCCTCCGCCGCAAGCCCGACCGGCGCCGCC CGGCCGGCGGATACACGGACCCGCGCGGCCGGCGCCGGGNTNCCCCCACCGGAGCCGCTGTCGTCGTCGTCGTCGGAGTCCATCGGCCAAAGCCGCGGCTGGCCCATCGACTTCCCGTTCACGCAGG ] [+] EMBL CB685574 [ GCGCGCTTCCCCTCCTCGCCGCCGCCGCCGCGGCGTGGGAGAATGAAGGCCATCGGTAGCGGCGGCGAGTGGTGGTGGAACCTCCCGTCCCTCCGCCGCAAGCCCGACCGGCGCCGCCGCGGCCGGCGGA ACACGGACCCGCGCGGCCGGCGCCGCGGT CCCCCACCGGAGCCGCTGTCGTCGTCGTCGTCGGAGTCCATCGGCCAAAGCCGCGGCTGGCCCATCGACTTCCCGTTCACGCAGGCCGTGACCGCCGCCTCTCTCACGCTTACGGGTGACACCATCGCGCAGGTCCGCCAGCGCATCGTCGACCGCCGCCTCCGCGGCCCCGAACCAGACAGCAAGGGTTTGGTACCGGACTTGTTGATGAGCCATGATTGGCTACGCGCGCTTCGTATGGCTTCATATGGATTTCTTCTTTATGGTCCGGGATCGCACGCGTGGTACCAGTTCCTTGATCAGTGTATGCCGAAGCCAACATTTGCAAATCTATCCACTAAGGTCATACTGAACCAGATTGCGCTTGGTCCTTGTGTTATTGGTGTAATTTTTGCCTGGAATAACTTATGGATAGGGAAACTGTCAGAACTTCCATCTAAATATCGGAATGATGCCCTTCCTACACTTCTTTTTGGGTTTAGATTTTGGATTCCTGTATCGATCATTAACTTTTGGATGGTTCCTTTGTCTGCTCGTGTTGCCTTCATGTCCTCTTGTGCCATTTTTTGGAACTTCTACCTGTCAACCACTATGAGCAAGTGAAACCTCTAGTATACCTTCACGGCATGTACAAGCCTCATTTGT ] [+] EMBL AU173905 [ GCGCGCTTCCCCTCCTCGCCGCCGCCGCCGCGGCGTGGGAGAATGAAGGCCATCGGTAGCGGCGGCGAGTGGTGGTGGAACCTCCCGTCCCTCCGCCGCAAGCCCGACCGGCGCCGCCGCGGCCGGCGGA ACACGGACCCGCGCGGCCGGCGCCGCGGT CCCCCACCGGAGCCGCTGTCGTCGTCGTCGTCGGAGTCCATCGGCCAAAGCCGCGGCTGGCCCATCGACTTCCCGTTCACGCAGGCCGTGACCGCCGCCTCTCTCACGCTTACGGGTGACACCATCGCGCAGGTCCGCCAGCGCATCGTCGACCGCCGCCTCCGCGGCCCCGAACCAGACAGCAAGGGTTTGGTACCGGACTTGTTGATGAGCCATGATTGGCTACGCGCGCTTCGTATGGCTTCATATGGATTTCTTCTTTATGGTCCG ] [-] EMBL CB685575 [ GCATGGTACCAGTTCCTTGATCAGTGTATGCCGAAGCCAACATTTGCAAATCTATCCACTAAGGTCATATTGACCCAGATTGCGCTTGGTCCTTGTGTTATTGGTGTAATTTTTGCCTGGAATAACTTATGGATAGGGAAACTGTCAGAACTTCCATCTAAATATCGGAATGATGCCCTTCGTACACTTCTTTTTGGGTTTAGATTTTGGATTCCTGTATCGATCATTAACTTTTGGATGGTTCCTTTGTCTGCTCGTGTTGCCTTCATGTCCTCTTGTGCCATTTTTTGGAACTTCTACCTGTCAACCAATATGAGCAAGTGAAACCTATAGTATACCTTCAGGGCATGTACAAGCGTCATTTGTCATGATACATGTGGTTCGGTAGCAAATGTTTTGCTTGGGTTATTGTGGGACTAAATGAACTGATGCGGATGAGGGTTTGAAGGAGATAATTTTTGCTCTGGTGGTAGAGTACATGGTAGAGTCTCCTCCCCTCCTGTGGACAATTGTGTGGCTTGCCTGGTCATGGAGGGAATTGTGGTAGT ] [-] EMBL CA762586 [ GGAAACCGTCAGAGCTTCCATCTGAATATGGGAATAATG CCTTCCTACACTTC TTTTGGGTTTAGATTTTGGATTCCTGTATCGATCATTAACTTTTGGATGGTTCCTTTGTCTGCTCGTGTTGCCTTCATGTCCTCTTGTGCCATTTTTAGGAACTTCTACCTGTCACCCACTATGAGCAAGTGAAACCTCTAGTATACCTTCAGGGCATGTACAAGCCTCATTTGTCATGATACATGTGGTTCCGTAGCAAATGTTTTGCTTGGGTTATTGTGGGACTAAATGAACTGCTACGGATGAGGGTTTGAAGGAGCTAATTTTTGCTCTGGTGGTAGAGTACATGGTAGAGTCACCTCACCTCC TGGACAATTCTGTCGCCTGCCTCGTCATTGACGGAATTCTGGTAGTGGTCTCGAGGACAAAGACGATGGAGAAAGAAATTGTGTTTCTCTAAACATGTGTGAGCCATCTACCATCTACCTCTAATTTGATAGGAAAGATGCTTGTAATTTTGATCATTTGTTCAATAAG CTAAACTTGTATGCAAG TACATACCGATACCCAGACT TTGAATAGAAGCACATTATTCAGATGGAGCAATTTTCACTTGTATTCCTTGCGTTTGGTTTTGAAGTTTTGAACTCAGCTGCAGAGGCTTTTTTTTAAAAAAAAAAAA] [+] EMBL AK059617 [ TAACTTTTGGATGGTTCCTTTGTCTGCTCGTGTTGCCTTCATGTCCTCTTGTGCCATTTTTTGGAACTTCTACCTGTCAACCACTATGAGCAAGTGAAACCTCTAGTATACCTTCAGGGCATGTACAAGCCTCATTTGTCATGATACATGTGGTTCCGTAGCAAATGTTTTGCTTGGGTTATTGTGGGACTAAATGAACTGCTACGGATGAGGGTTTGAAGGAGCTAATTTTTGCTCTGGTGGTAGAGTACATGGTAGAGTCACCTCACCTCCTGTGGACAATTCTGTCGCCTGCCTCGTCATTGACGGAATTCTGGTAGTGGTCTCGAGGACAAAGTCGATGGAGAAAGAAATTGTGTTTCTCTAAACATGTGTGAGCCATCTACCATCTACCTCTAATTTGATAGGAAAGATGCTTGTAATTTTGATCATTTGTTCAATAAG CTAAACTT ] [+] EMBL AA753041 [ GTTGCCTTCATGT CNCCCGTGCCATTNANTGGAA TTCTACCTGTCAACCACTATGAGCAAGTGAAACCTCTAGTATNCCTTCAGGGCATGTACAAGCCTCATTTGTCATGATACATGTGGTTCCGTAGCAAATGTTTTGCTTGGGTTATTGTGGGACTAAATGAACTGCTACGGATGAGGGTTTGAAGGAGCTAATTTTTGCTCTGGTGGTAGAGTACATGGTAGAGTCACCTCACCTCCTGTGGACAATTCTGTCGCCTGCCTCGTCATTGACGGAATTCTGGTAGTGGTCTCGAGGACAAAGTCGATGGAGAAAGATNTTNTGTTTCTCTAAACATGTGTGAGCCATCTACCATCTACCTCTAATTTGATAGGAAAGATGCTTGTAATTTNGATCATNTGTTCAATAAGCCNAAACTTGTATGCNAGTTACATNCCGATACCCAGACTCCTGAA ] [+] EMBL AU056547 [ CTGTGGACAATTCTGTCGCCTGCCTCGTCATTGACGGAATTCTGGTNGTGGTCTCGNGGACAAAGTCGATGGNGAAAGAAATTGTGTTTCTCTAAACATGTGTGAGCCATCTACCATCTACCTCTAATTTGATAGGAAAGATGCTTGTAATTTTGATCATTTGTTCAATAAG CTAAACTTGTATGCAAG TACATACCGATACCCNGACT CTGAATAGANGNACATTATTCAGNTGGNGCAAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||