|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11504#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 826 fasta sequence
[TTTTTTTTTTTTTTAATGAACCATCCACTGGAATTGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCANCGNCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTAGAAAATCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGCTGAGGTGCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCATCAACACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAATGCCGCTCCTTGTTTGGTTCATGATCAACCGAAAGCTGTTTTGCTACACCACTCTTGCTAATAACTGCTCGTGAATCTCCAACATTTGCAACTACTAGGTTCACAGAATTTTCACTGCTTATTAATATGGCAGTAACAGCAGTGGAGCCTCCTCTGCCCAACTCAGCTGCGCTTTCCAATATTTTTGCATCCGTAAGTTGATATGCATTTCGAATTGCAGCTTGTGGGTTGCTCAAGAATTCTGCTTTAAGATATTATCAAAGAGATGTGAGCGCAGGAAGTCTGGAACAGTGTGGCCCAAATGCCCAT]
[-] EMBL C98529 [TTTTTTTTTTTTTTAATGAACCATCCACTGGAATTGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCANCGNCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTAGAAAATCAGTATTCTCGTCTATAG ]
[+] EMBL CB668038 [ tcTTTTTTTTAATGAACCATCCACTGGAATTGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTAGAAAATCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGCTGAGGTGCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCATCAACACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAATGCCGCTCCTTGTTTGGTTCATGATCAACCGAAAGCTGTTTTGCTACACCACTCTTGCTAATAACTGCTCGTGAATCTCCAACATTTGCAACTACTAGGTTCACAGAATTTTCACTGCTTATTAATATGGCAGTAACAGCAGTGGAGCCTCCTCTGCCCAACTCAGCTGCGCTTTCCAATATTTTTGCATCCGTAAGTTGATATGCATTTCGAATTGCAGCTTGTGGGTTGCTCAAGAATTCTGCTTTAAGATATTATCAAAGAGATGTGAGCGCAGGAAGTCTGGAACAGTGTGGCCCAAATGCCCAT]
consensusID : consensus_11504#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 786 fasta sequence
[TCTTTTTTTTAATGAACCATCCACTGGAATTGTAGGGATAATCTATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTGGATATGTATGATCTTGAAATTATAATCGTTGCATATGATAAAAGAACGTCGCTAATGCAACTTAGCAGCTCATTAAGGCTGGGAACCCCTCCTCCCCGGCACGCAAAACGGAGCACGTACTATTGCACAATTAATTATGTATTAACTTTTTTTTTGAAAAATGGATTAATATAATTTTTTAAAACAACTTTCGTATAGAAATTTTTTACAAAAAAACACACCGTTTAGCAGTTTGAAAAGCATGCACGTGGAAAACGAGCGAGGTGAGTTGGGAAAACTAGCATAAAAAGAGTAAAGAACTCAACTAAAACAAAAAAAAAAACAATCATGCAATAGTCATAGATGCAGCTTAAGAAAATAGAAAAATCAAGGTTCGCAACTCATGAGTCAGGATGTGCTTATGCATGCCAAATTACATACTTCATTCATCCCAAAATATAAGCATTTTTAGAATAGTGCCAAATCA]
[+] EMBL CB645442 [TCTTTTTTTTAATGAACCATCCACTGGAATTGTAGGGATAATCTATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTGGATATGTATGATCTTGAAATTATAATCGTTGCATATGATAAAAGAACGTCGCTAATGCAACTTAGCAGCTCATTAAGGCTGGGAACCCCTCCTCCCCGGCACGCAAAACGGAGCACGTACTATTGCACAATTAATTATGTATTAACTTTTTTTTTGAAAAATGGATTAATATAATTTTTTAAAACAACTTTCGTATAGAAATTTTTTACAAAAAAACACACCGTTTAGCAGTTTGAAAAGCATGCACGTGGAAAACGAGCGAGGTGAGTTGGGAAAACTAGCATAAAAAGAGTAAAGAACTCAACTAAAACAAAAAAAAAAACAATCATGCAATAGTCATAGATGCAGCTTAAGAAAATAGAAAAATCAAGGTTCGCAACTCATGAGTCAGGATGTGCTTATGCATGCCAAATTACATACTTCATTCATCCCAAAATATAAGCATTTTTAGAATAGTGCCAAATCA]
consensusID : consensus_11504#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 716 fasta sequence
[CTGGAATTGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTGGATATGTTTGATCTTGAAATTATAATCCGTTGCATATGATAAAAGAACTTCGCTAATGCCACTTAGCACTCATTAAGGCTGGGAACCCTCCTCCCCGGCACGCCAAACGGAGCACTTCTAATGCACAATTAATTATTTTTAACTTTTTTTTTTGAAAAATGGAATAATATANTTTTTAAACACTTTCCTTNTAAAAATTTTTACAAAAAACCNCCTTTAACATTTGAAAACCTCCCNTTGAAAACAACAAGGTATTTTGGGAACTACCTNAAAAATTTAAAANCCCCTAACAAAAAAACACCTCCTATCCTAATCCCTTAAAAAAAAAACAGTCCCCCCATCGGATTCTTGCGCCATATCTCTCNCCNATTACTTTNAATCCACACTTAATTATTTTCCANTAAAAACCNTNTGATGCA]
[+] EMBL BE229266 [CTGGAATTGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTGGATATGTTTGATCTTGAAATTATAATCCGTTGCATATGATAAAAGAACTTCGCTAATGCCACTTAGCACTCATTAAGGCTGGGAACCCTCCTCCCCGGCACGCCAAACGGAGCACTTCTAATGCACAATTAATTATTTTTAACTTTTTTTTTTGAAAAATGGAATAATATANTTTTTAAACACTTTCCTTNTAAAAATTTTTACAAAAAACCNCCTTTAACATTTGAAAACCTCCCNTTGAAAACAACAAGGTATTTTGGGAACTACCTNAAAAATTTAAAANCCCCTAACAAAAAAACACCTCCTATCCTAATCCCTTAAAAAAAAAACAGTCCCCCCATCGGATTCTTGCGCCATATCTCTCNCCNATTACTTTNAATCCACACTTAATTATTTTCCANTAAAAACCNTNTGATGCA]
consensusID : consensus_11504#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 627 fasta sequence
[TTTTTTTTTTGGAACCATCCAGGGGAATGTAGGGATAATATATGAACATGTCCCATGGGGCATTCAACAATCGGCAATGTTCGACAAGACTTGATCCATTTGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAACAAAAGTAACAACACTGAAACNCATCAGAGTGGTAGCAATGTGTACACTGTGGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTGTGCTTTTCCGGTTCACGGCCTGGCTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGGCCTCTGTGGGTTGGACATCACCTTCCANTAATCCATCACTTGGCAAGAATTAGAAAATCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGCTGAGGTGCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCATCAACACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAATGCCGCTCCTTGTTGGGTTCATGATCAACCGAAAGCTGTTTGGCTACACCACTCTTGCTAATAACG]
[-] EMBL BM421981 [TTTTTTTTTTGGAACCATCCAGGGGAATGTAGGGATAATATATGAACATGTCCCATGGGGCATTCAACAATCGGCAATGTTCGACAAGACTTGATCCATTTGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAACAAAAGTAACAACACTGAAACNCATCAGAGTGGTAGCAATGTGTACACTGTGGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTGTGCTTTTCCGGTTCACGGCCTGGCTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGGCCTCTGTGGGTTGGACATCACCTTCCANTAATCCATCACTTGGCAAGAATTAGAAAATC ]
[-] EMBL BM419228 [ ttttTGTTCGACAAGACTTGATCCATTGGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAACAAAAGTAACAACACTGAAAC CATCAGA TGGTAGCAA TGTACACT T GTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCT TGCTTTTCCGGTTCACGGCCT GCTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACC GCCTCT T GGTTGGACATCACCTTCCA TAATCCATCACTT GCAAGAATTAGAAAATCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGCTGAGGTGCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCATCAACACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAATGCCGCTCCTTGTTGGGTTCATGATCAACCGAAAGCTGTTTGGCTACACCACTCTTGCTAATAACG]
consensusID : consensus_11504#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 606 fasta sequence
[TTTTTTNTTTTNTTTNTNTNNTNNNNNNTNNNNTNTNNTNNAAGAACCATNCACTGGAATNGTAGGGATAATATATGAACATGTCCCATGNGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTAGAAAATCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGCTGAGGTGCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCATCAACACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAATGCCGCTCCTTGTTTGGTTCATGATCAACCGAAAGCTGTTTTGCTACACCACTCTTGCTAATA]
[-] EMBL CA756391 [TTTTTTNTTTTNTTTNTNTNNTNNNNNNTNNNNTNTNNTNNAAGAACCATNCACTGGAATNGTAGGGATAATATATGAACATGTCCCATGNGGGCATTCAACAATCGGCAATGTTCGACAAGACTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTAGAAAATCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGCTGAGGTGCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCATCAACACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAATGCCGCTCCTTGTTTGGTTCATGATCAACCGAAAGCTGTTTTGCTACACCACTCTTGCTAATA]
consensusID : consensus_11504#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 581 fasta sequence
[TTTTTTTTTTTGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTTGATCCATTTGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTANAAAATCAGTATTCTCGTCTATAGGTTCTCCACCACATCTGGCTCTGAACTGAAGTGCTCTTTAGGTCCGGTCTCCAATGCCTTGCAANCGCAACTGACATCACACNCGTAATCTCCGGTTATTTTGAAANAAACNCCTTTTNCCCATGAATGCCGNCCTNNTTGGTCCCTGCAATCCGCCCCCGGGGATCCTATTCTAAANGCCCCCCNGNGAA]
[+] EMBL AA753483 [TTTTTTTTTTTGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACAAGACTTGATCCATTTGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAATTGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTTGCTTTTCCGGTTCACGGCCTGCTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTANAAAATCAGTATTCTCGTCTATAGGTTCTCCACCACATCTGGCTCTGAACTGAAGTGCTCTTTAGGTCCGGTCTCCAATGCCTTGCAANCGCAACTGACATCACACNCGTAATCTCCGGTTATTTTGAAANAAACNCCTTTTNCCCATGAATGCCGNCCTNNTTGGTCCCTGCAATCCGCCCCCGGGGATCCTATTCTAAANGCCCCCCNGNGAA]
[-] EMBL BQ907320 [ ttttttttTGTTCGACAAGACTTGATCCATTTGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAACAAAAGTAACAACACTGAAACCATCAGATGGTAGCAA TGTACACTTGTATGAGACTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTGGCTTTTCCGGTTCACGGCCTGCTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCTTGATTTCATCCACCGCCTCTTGGTTGGACATCACCTTCCATAATCCATCACTTGCAAGAATTAGAAAATCAGTATTCTCGTCTATAGGTTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11504#0 --------------------------TTTTTTTTTTTTTTAATGAACCATCCACTGGAAT 34
consensus_11504#4 TTTTTTNTTTTNTTTNTNTNNTNNNNNNTNNNNTNTNNTNNAAGAACCATNCACTGGAAT 60
consensus_11504#3 --------------------------------TTTTTTTTTTGGAACCATCCAGGGGAAT 28
consensus_11504#5 --------------------------------------------------TTTTTTTTTT 10
consensus_11504#1 ------------------------------TCTTTTTTTTAATGAACCATCCACTGGAAT 30
consensus_11504#2 -----------------------------------------------------CTGGAAT 7
*
consensus_11504#0 TGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACA 94
consensus_11504#4 NGTAGGGATAATATATGAACATGTCCCATGNGGGCATTCAACAATCGGCAATGTTCGACA 120
consensus_11504#3 -GTAGGGATAATATATGAACATGTCCCAT-GGGGCATTCAACAATCGGCAATGTTCGACA 86
consensus_11504#5 TGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACA 70
consensus_11504#1 TGTAGGGATAATCTATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACA 90
consensus_11504#2 TGTAGGGATAATATATGAACATGTCCCATTGGGGCATTCAACAATCGGCAATGTTCGACA 67
*********** **************** *****************************
consensus_11504#0 AGACT----------------------------------------AACCAGAATATTCAA 114
consensus_11504#4 AGACT----------------------------------------AACCAGAATATTCAA 140
consensus_11504#3 AGACTTGATCCATTTGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAA 146
consensus_11504#5 AGACTTGATCCATTTGCGGACTTTTATTCCCAACAAGAAAAGATTAACCAGAATATTCAA 130
consensus_11504#1 AGACT----------------------------------------AACCAGAATATTCAA 110
consensus_11504#2 AGACT----------------------------------------AACCAGAATATTCAA 87
***** ***************
consensus_11504#0 CAAAAGTAACAACACTGAAACC-ATCAGA-TGGTAGCAAT-TGTACACTT--GTATGAGA 169
consensus_11504#4 CAAAAGTAACAACACTGAAACC-ATCAGA-TGGTAGCAAT-TGTACACTT--GTATGAGA 195
consensus_11504#3 CAAAAGTAACAACACTGAAACNCATCAGAGTGGTAGCAATGTGTACACTGTGGTATGAGA 206
consensus_11504#5 CAAAAGTAACAACACTGAAACC-ATCAGA-TGGTAGCAAT-TGTACACTT--GTATGAGA 185
consensus_11504#1 CAAAAGTAACAACACTGAAACC-ATCAGA-TGGTAGCAAT-TGTACACTT--GTATGAGA 165
consensus_11504#2 CAAAAGTAACAACACTGAAACC-ATCAGA-TGGTAGCAAT-TGTACACTT--GTATGAGA 142
********************* ****** ********** ******** ********
consensus_11504#0 CTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTT-TGCTTTT 228
consensus_11504#4 CTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTT-TGCTTTT 254
consensus_11504#3 CTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTTGTGCTTTT 266
consensus_11504#5 CTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTT-TGCTTTT 244
consensus_11504#1 CTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTT-TGCTTTT 224
consensus_11504#2 CTCTGTTTCTGCTAGCAGAGGAATTTTACAACGATGCAGGAGATGTCGTCTT-TGCTTTT 201
**************************************************** *******
consensus_11504#0 CCGGTTCACGGCCTG-CTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCT 287
consensus_11504#4 CCGGTTCACGGCCTG-CTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCT 313
consensus_11504#3 CCGGTTCACGGCCTGGCTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCT 326
consensus_11504#5 CCGGTTCACGGCCTG-CTCCGTTAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCT 303
consensus_11504#1 CCGGTTCACGGCCTG-CTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCT 283
consensus_11504#2 CCGGTTCACGGCCTG-CTCCGTCAGATGCTTCGCAGCTGCCTGAGCATCCTTGAAGTCCT 260
*************** ****** *************************************
consensus_11504#0 TGATTTCATCCANCGNCTCTTG---GTTGGACATCACCTTCCAT-AATCCATCACTTG-C 342
consensus_11504#4 TGATTTCATCCACCGCCTCTTG---GTTGGACATCACCTTCCAT-AATCCATCACTTG-C 368
consensus_11504#3 TGATTTCATCCACCGGCCTCTGTGGGTTGGACATCACCTTCCANTAATCCATCACTTGGC 386
consensus_11504#5 TGATTTCATCCACCGCCTCTTG---GTTGGACATCACCTTCCAT-AATCCATCACTTG-C 358
consensus_11504#1 TGATTTCATCCACCGCCTCTTG---GTTGGACATCACCTGG-AT--ATGTATGATCTT-- 335
consensus_11504#2 TGATTTCATCCACCGCCTCTTG---GTTGGACATCACCTGG-AT--ATGTTTGATCTT-- 312
************ ** * ** ************** * ** * * *
consensus_11504#0 AAGAATTAGAAAA-TCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGC 401
consensus_11504#4 AAGAATTAGAAAA-TCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGC 427
consensus_11504#3 AAGAATTAGAAAA-TCAGTATTCTCGTCTATAGGTTCCTCCACCACATCTGGCTCTGAGC 445
consensus_11504#5 AAGAATTANAAAA-TCAGTATTCTCGTCTATAGGTTC-TCCACCACATCTGGCTCTGAAC 416
consensus_11504#1 -GAAATTATAATC-GTTGCATATGATAAAAGAACGTCGCTAATGCAACTTAGCAGCTCAT 393
consensus_11504#2 -GAAATTATAATCCGTTGCATATGATAAAAGAACTTCGCTAATGCCACTTAGCA-CTCAT 370
***** ** * ** * * ** * * * **
consensus_11504#0 TGAGGT---GCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCAT 458
consensus_11504#4 TGAGGT---GCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCAT 484
consensus_11504#3 TGAGGT---GCTTCTTTAGGCTCCGGTCTCCAAATGCCCTTGCAACCGCAAGCTGACCAT 502
consensus_11504#5 TGAAGT---GCT-CTTTAGG-TCCGGTCTCCAA-TGCC-TTGCAANCGCAA-CTGAC-AT 467
consensus_11504#1 TAAGGCTGGGAACCCCTCCTCCCCGGCACGCAA--AACGGAGCACGTACTATTGCACAAT 451
consensus_11504#2 TAAGGCTGGGAACCC-TCCTCCCCGGCACGCCA--AACGGAGCACTT-CTAATGCACAAT 426
* * * * * * **** * * * *** * * ** **
consensus_11504#0 CAA-CACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAA 517
consensus_11504#4 CAA-CACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAA 543
consensus_11504#3 CAA-CACGCGGTACATCTCCTGGTAAGTTTGAAACAAAGCCACCTTTTTTCTCGATTGAA 561
consensus_11504#5 CA--CACNCG-TA-ATCTCC-GGTTATTTTGAAANAAA--CNCCTTTTNCCCA---TGAA 517
consensus_11504#1 TAATTATGTATTAACTTTTTTTTTGA----AAAATGGATTAATATAATTTTTTAAAACAA 507
consensus_11504#2 TAATTATTTTTAACTTTTTTTTTTGA----AAAATGGAATAATATANTTTTT--AAACAC 480
* * * * * * * *** * * * *
consensus_11504#0 TGCCGCTCCTTGTTTGGTTCATGATCAACCGAAAGCTGTTTTGCTACACCACTCT----T 573
consensus_11504#4 TGCCGCTCCTTGTTTGGTTCATGATCAACCGAAAGCTGTTTTGCTACACCACTCT----T 599
consensus_11504#3 TGCCGCTCCTTGTTGGGTTCATGATCAACCGAAAGCTGTTTGGCTACACCACTCT----T 617
consensus_11504#5 TGCCGNCCTNNTTGGTCCCTGCAATCCGCCCCCGGGGATCCTATTCTAAANGCCC----C 573
consensus_11504#1 CTTTCGTATAGAAATTTTTTACAAAAAAACACACCGTTTAGCAGTTTGAAAAGCATGCAC 567
consensus_11504#2 TTTCCTTNTAAAAATTTTT-ACAAAAAACCNCC---TTTAACA-TTTGAAAACCT--CCC 533
* * * * *
consensus_11504#0 GCTAATAACTGCTCGTGAATCTCCAACATTTGCAACTACTAGGTTCACAGAATTTTCACT 633
consensus_11504#4 GCTAATA----------------------------------------------------- 606
consensus_11504#3 GCTAATAACG-------------------------------------------------- 627
consensus_11504#5 CCNGNGAA---------------------------------------------------- 581
consensus_11504#1 GTGGAAAACGAGCGAGGTGAGTTGGGAAAACTAGCATAAAAAGAGTAAAGAACTCAACTA 627
consensus_11504#2 NTTGAAAAC-AACAAGGTATTTTGGGAA--CTA-CCTNAAAAATTTAAAANCCCC----- 584
*
consensus_11504#0 GCTTATTAATATGGCAGTAACAGCAGTGGAGCCTCCTCTGCCCAACTCAGCTGCGCTTTC 693
consensus_11504#4 ------------------------------------------------------------
consensus_11504#3 ------------------------------------------------------------
consensus_11504#5 ------------------------------------------------------------
consensus_11504#1 AAACAAAAAAAAAAACAATCATGCAATAGTCATAGATGCAGCTTAAGAAAATAGAAAAAT 687
consensus_11504#2 ---TAACAAAAAAACACCTCCTATCCTAATCC---------CTTAAAAAAA--AAACAGT 630
consensus_11504#0 CAATATTTTTGCATCCGTAAGTTGATATGCATTTCGAATTGCAGCTTGTGGGTTGCTCAA 753
consensus_11504#4 ------------------------------------------------------------
consensus_11504#3 ------------------------------------------------------------
consensus_11504#5 ------------------------------------------------------------
consensus_11504#1 CAAGGTTCGCAACTCATGAGTCAGGATGTGCTTATGCATGCCAAATTACATACTTCATTC 747
consensus_11504#2 CCCCCCATCGGATTCTTGCGCCATATCTCTCNCCNATTACTTTNAATCCACACTTAATTA 690
consensus_11504#0 GAATTCTGCTTTAAGATATTATCAAAGAGATGTGAGCGCAGGAAGTCTGGAACAGTGTGG 813
consensus_11504#4 ------------------------------------------------------------
consensus_11504#3 ------------------------------------------------------------
consensus_11504#5 ------------------------------------------------------------
consensus_11504#1 ATCCCAAAATATAAGCATTTTTAGAATAGTGCCAAATCA--------------------- 786
consensus_11504#2 TTTTCCANTAAAAACCNTNTGATGCA---------------------------------- 716
consensus_11504#0 CCCAAATGCCCAT 826
consensus_11504#4 -------------
consensus_11504#3 -------------
consensus_11504#5 -------------
consensus_11504#1 -------------
consensus_11504#2 -------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||