cluster # 11515

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Oryza sativa
cluster # 11515 cluster # 11515 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11515#0 length = 1749 sequences # 6

consensus_11515#1 length = 786 sequences # 1
consensus_11515#2 length = 514 sequences # 2

consensusID : consensus_11515#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1749
fasta sequence

                              [AGTTGCATCGATCGATCCTTGGCGATCGATCGAGCTAGCTGCTGCGAAAATGGCGGCCTCCTCCTTCCTCGTTGAGTGCCTGTCATGGCTTGTCGTCGTCCTCTTCTCCCTGTACATCTTCCAGCTTCTCCGCGACGCCCGCCGCCGCCTCCCCCCGGGTCCCTGGCCGCCGAAGCCGCTCGTCGGCGACCTCCTCGACCTCGGCGAGGACGGCAAGCAGCACCGCACGTTCCTCCGCCTCGCCGGCCGCTACGGCGGCCTCATGTGCCTCCGCTTCGGCATGGTGCCCCACGTGATCGTCTCCACCCCGGACGCCCTGCGCGCGGTGTTCGCCGCCGCCGGCGCCGGCGGCGGCGGCGGCGGGGAAGGCAAGAAGGTGGATGGCATCGCGGGCCTCCCGAGCCTCGACGTGCTCAGCGCCATGGGCCACCGCGCGCACACCATCTTCGCGCTCCCGAGCCAGGACGGCAAGTGGCGCGCGCTCCGCAAGTTCGCCGCCGCCGAGATGCTCGCGCCGCGGCGGATCTCGTCCGCGGCGGCCGGCGCGCAGCTGCAGACCAAGATCGTGGAGGCGCTCCGCCGCGAGGTGTCCGGGCACGCGGCGCGGGGCGCCGCCGTGGTGTTCAGGCACGCGGTGCTCGACTCCATCCTGAGCCTCCTCCTCGGCGTGCTCTACTCCACCGACCTGGAGCGCGAGGAGCGCGCCATGTTCAGGGACCTCATTGAGGAGATCGTCGGGATGCTGGGGACGGCGAACGTCTCCGACGTGTTCCCGCCGGTGGCCGCGCTCGACCTCCAGGGCCTCCGCCGCAGGATGACCGACCTCCTCACCATCATGTACCGCCACTTCGACGACCAGGTCGCCCTGCGGCGGCGCAGCCGGGACGCCGGCGAGGCGCGCAAGAACGACGTGCTCGACACCGTCCTCGACAAGGAGGAGAGCGAGTGGAAGCAGGAGGGCTCCCTGCTAAGCCATGACGTCATGCGAGTTCTCCTCTCCGATTTATACGGCGCTGGAGCAAGCACGACAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGTGATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGAATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCGAACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAGGATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGCGTGGTCGGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTGCTCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTTAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCAAAAAAAAAAAAAAA]

[+] EMBL AK059089             [AGTTGCATCGATCGATCCTTGGCGATCGATCGAGCTAGCTGCTGCGAAAATGGCGGCCTCCTCCTTCCTCGTTGAGTGCCTGTCATGGCTTGTCGTCGTCCTCTTCTCCCTGTACATCTTCCAGCTTCTCCGCGACGCCCGCCGCCGCCTCCCCCCGGGTCCCTGGCCGCCGAAGCCGCTCGTCGGCGACCTCCTCGACCTCGGCGAGGACGGCAAGCAGCACCGCACGTTCCTCCGCCTCGCCGGCCGCTACGGCGGCCTCATGTGCCTCCGCTTCGGCATGGTGCCCCACGTGATCGTCTCCACCCCGGACGCCCTGCGCGCGGTGTTCGCCGCCGCCGGCGCCGGCGGCGGCGGCGGCGGGGAAGGCAAGAAGGTGGATGGCATCGCGGGCCTCCCGAGCCTCGACGTGCTCAGCGCCATGGGCCACCGCGCGCACACCATCTTCGCGCTCCCGAGCCAGGACGGCAAGTGGCGCGCGCTCCGCAAGTCCGCCGCCGCCGAGATGCTCGCGCCGCGGCGGATCTCGTCCGCGGCGGCCGGCGCGCAGCTGCAGACCAAGATCGTGGAGGCGCTCCGCCGCGAGGTGTCCGGGCACGCGGCGCGGGGCGCCGCCGTGGTGTTCAGGCACGCGGTGCTCGACTCCATCCTGAGCCTCCTCCTCGGCGTGCTCTACTCCACCGACCTGGAGCGCGAGGAGCGCGCCATGTTCAGGGACCTCATTGAGGAGATCGTCGGGATGCTGGGGACGGCGAACGTCTCCGACGTGTTCCCGCCGGTGGCCGCGCTCGACCTCCAGGGCCTCCGCCGCAGGATGACCGACCTCCTCACCATCATGTACCGCCACTTCGACGACCAGGTCGCCCTGCGGCGGCGCAGCCGGGACGCCGGCGAGGCGCGCAAGAACGACGTGCTCGACACCGTCCTCGACAAGGAGGAGAGCGAGTGGAAGCAGGAGGGCTCCCTGCTAAGCCATGACGTCATGCGAGTTCTCCTCTCCGATTTATACGGCGCTGGAGCAAGCACGACAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGTGATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGAATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCGAACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAGGATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGCGTGGTCGGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTGCTCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTTAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTC                         ]
[+] EMBL AK058424             [AGTTGCATCGATCGATCCTTGGCGATCGATCGAGCTAGCTGCTGCGAAAATGGCGGCCTCCTCCTTCCTCGTTGAGTGCCTGTCATGGCTTGTCGTCGTCCTCTTCTCCCTGTACATCTTCCAGCTTCTCCGCGACGCCCGCCGCCGCCTCCCCCCGGGTCCCTGGCCGCCGAAGCCGCTCGTCGGCGACCTCCTCGACCTCGGCGAGGACGGCAAGCAGCACCGCACGTTCCTCCGCCTCGCCGGCCGCTACGGCGGCCTCATGTGCCTCCGCTTCGGCATGGTGCCCCACGTGATCGTCTCCACCCCGGACGCCCTGCGCGCGGTGTTCGCCGCCGCCGGCGCCGGCGGCGGCGGCGGCGGGGAAGGCAAGAAGGTGGATGGCATCGCGGGCCTCCCGAGCCTCGACGTGCTCAGCGCCATGGGCCACCGCGCGCACACCATCTTCGCGCTCCCGAGCCAGGACGGCAAGTGGCGCGCGCTCCGCAAGTTCGCCGCCGCCGAGATGCTCGCGCCGCGGCGGATCTCGTCCGCGGCGGCCGGCGCGCAGCTGCAGACCAAGATCGTGGAGGCGCTCCGCCGCGAGGTGTCCGGGCACGCGGCGCGGGGCGCCGCCGTGGTGTTCAGGCACGCGGTGCTCGACTCCATCCTGAGCCTCCTCCTCGGCGTGCTCTACTCCACCGACCTGGAGCGCGAGGAGCGCGCCATGTTCAGGGACCTCATTGAGGAGATCGTCGGGATGCTGGGGACGGCGAACGTCTCCGACGTGTTCCCGCCGGTGGCCGCGCTCGACCTCCAGGGCCTCCGCCGCAGGATGACCGACCTCCTCACCATCATGTACCGCCACTTCGACGACCAGGTCGCCCTGCGGCGGCGCAGCCGGGACGCCGGCGAGGCGCGCAAGAACGACGTGCTCGACACCGTCCTCGACAAGGAGGAGAGCGAGTGGAAGCAGGAGGGCTCCCTGCTAAGCCATGACGTCATGCGAGTTCTCCTCTCCGATTTATACGGCGCTGGAGCAAGCACGACAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGTGATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGGATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCGAACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAGGATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGCGTGGTCGGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGA                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB634681             [          ATCGATCCTTGGCGATCGATCGAGCTAGCTGCTGCGAAAATGGCGGCCTCCTCCTTCCTCGTTGAGTGCCTGTCATGGCTTGTCGTCGTCCTCTTCTCCCTGTACATCTTCCAGCTTCTCCGCGACGCCCGCCGCCGCCTCCCCCCGGGTCCCTGGCCGCCGAAGCCGCTCGTCGGCGACCTCCTCGACCTCGGCGAGGACGGCAAGCAGCACCGCACGTTCCTCCGCCTCGCCGGCCGCTACGGCGGCCTCATGTGCCTCCGCTTCGGCATGGTGCCCCACGTGATCGTCTCCACCCCGGACGCCCTGCGCGCGGTGTTCGCCGCCGCCGGCGGCGGCGGCGGCGGCGGCGGGGAAGGCAAGAAGGTGGATGGCATCGCGGGCCTCCCGAGCCTCGACGTGCTCAGCGCCATGGGCCACCGCGCGCACACCATCTTCGCGCTCCCGAGCCAGGACGGCAAGTGGCGCGCGCTCCGCAAGTTCGCCGCCGCCGAGATGCTCGCGCCGCGGCGGATCTCGTCCGCGGCGGCCGGCGCGCAGCTGCAGACCAAGATCGTGGAGGCGCTCCGCCGCGAGGTGTCCGGGCACGCGGCGCGGGGCGCCGCCGTGGTGTTCAGGCACGCGGTGCTCAACTCCATCCTGAGCCTCCTCCTCGGCGTGCTCTACTCCACCGACCTGGAGCGCGAGGAGCGCGCCATGTTCANGGACCTCATTGAGGAGATCGTCGGGATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSS13172A            [                     GCGATCGATCGAGCTAGCTGCTGCGAAAATGGCGGCCTCCTCCTTCCTCGTTGAGTGCCTGTCATGGCTTGTCGTCGTCCTCTTCTCCCTGTACATCTTCCAGCTTCTCCGCGACGCCCGCCGCCGCCTCCCCCCGGGTCCCTGGCCGCCGAAGCCGCTCGTCGGCGACCTCCTCGACCTCGGCGAGGACGGCAAGCAGCACCGCACGTTCCTCCGCCTCGCCGGCCGCTAC GCGGCTTCATGTGCCTCCGCTTCGGCATGGTGCCCCACGTNATCGTCTCCACCCCGGACGNCCTGCGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AW070149             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gccgaGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAGGATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGCGTGGTCGGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATAAGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCG                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU101762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACNTGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTTAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCAAAAAAAAAAAAAAA]




>consensus_11515#0
AGTTGCATCGATCGATCCTTGGCGATCGATCGAGCTAGCTGCTGCGAAAATGGCGGCCTC
CTCCTTCCTCGTTGAGTGCCTGTCATGGCTTGTCGTCGTCCTCTTCTCCCTGTACATCTT
CCAGCTTCTCCGCGACGCCCGCCGCCGCCTCCCCCCGGGTCCCTGGCCGCCGAAGCCGCT
CGTCGGCGACCTCCTCGACCTCGGCGAGGACGGCAAGCAGCACCGCACGTTCCTCCGCCT
CGCCGGCCGCTACGGCGGCCTCATGTGCCTCCGCTTCGGCATGGTGCCCCACGTGATCGT
CTCCACCCCGGACGCCCTGCGCGCGGTGTTCGCCGCCGCCGGCGCCGGCGGCGGCGGCGG
CGGGGAAGGCAAGAAGGTGGATGGCATCGCGGGCCTCCCGAGCCTCGACGTGCTCAGCGC
CATGGGCCACCGCGCGCACACCATCTTCGCGCTCCCGAGCCAGGACGGCAAGTGGCGCGC
GCTCCGCAAGTTCGCCGCCGCCGAGATGCTCGCGCCGCGGCGGATCTCGTCCGCGGCGGC
CGGCGCGCAGCTGCAGACCAAGATCGTGGAGGCGCTCCGCCGCGAGGTGTCCGGGCACGC
GGCGCGGGGCGCCGCCGTGGTGTTCAGGCACGCGGTGCTCGACTCCATCCTGAGCCTCCT
CCTCGGCGTGCTCTACTCCACCGACCTGGAGCGCGAGGAGCGCGCCATGTTCAGGGACCT
CATTGAGGAGATCGTCGGGATGCTGGGGACGGCGAACGTCTCCGACGTGTTCCCGCCGGT
GGCCGCGCTCGACCTCCAGGGCCTCCGCCGCAGGATGACCGACCTCCTCACCATCATGTA
CCGCCACTTCGACGACCAGGTCGCCCTGCGGCGGCGCAGCCGGGACGCCGGCGAGGCGCG
CAAGAACGACGTGCTCGACACCGTCCTCGACAAGGAGGAGAGCGAGTGGAAGCAGGAGGG
CTCCCTGCTAAGCCATGACGTCATGCGAGTTCTCCTCTCCGATTTATACGGCGCTGGAGC
AAGCACGACAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGT
GATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGA
ATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCG
AACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAG
GATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGC
GTGGTCGGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATA
TCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGAT
GCCGCTTGCTCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTG
GGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGT
GTTATCTCTAGTTAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTA
ATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAG
GGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCAAAAAA
AAAAAAAAA

consensusID : consensus_11515#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 786
fasta sequence

                              [CAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGTGATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGAATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCGAACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAGGATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGCGTGGTCAGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTGCGCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTACTACGAGTGATGTAATAACATCCAAAAATTTTGAGGCTCAACTTAATTTTTTTGAGTAAATTTTAAAAAAAAAG]

[-] EMBL CB634682             [CAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGTGATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGAATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCGAACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAGGATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGCGTGGTCAGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTGCGCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTACTACGAGTGATGTAATAACATCCAAAAATTTTGAGGCTCAACTTAATTTTTTTGAGTAAATTTTAAAAAAAAAG]




>consensus_11515#1
CAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGTGATGACCA
AGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGAATCCGACA
TTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCGAACGGTGG
TACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAGGATCCCCA
AGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGCGTGGTCAG
AGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCC
AAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTG
CGCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTC
CGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTC
TAGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATC
CAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTA
TCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTACTACGAGT
GATGTAATAACATCCAAAAATTTTGAGGCTCAACTTAATTTTTTTGAGTAAATTTTAAAA
AAAAAG

consensusID : consensus_11515#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 514
fasta sequence

                              [GCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTGCGCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTACTACGAGTGATGTAATAACATCCAAAAATTTTGAGGCTCAAAACAAAAAAAAAACAAATATACCCACTACTCTACTCACATTATTCCCTTTATATTATCACAT]

[+] EMBL CA757037             [GCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTGCGCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTACTACGAGTGATGTAATAACATCCAAAAATTTTGAGGCTCAAAACAAAAAAAAAACAAATATACCCACTACTCTACTCACATTATTCCCTTTATATTATCACAT]
[+] EMBL AU096446             [   GGAAAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCAAGACTTCGAAATGAT CCCTTCGGCNTCGGCCGGCGCATNTGCCCCGGGATGCCGCTTGCTCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCCGGCGGATGCAAAGGNGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCTAGTTAACCCCCTNNAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTACTACGAGTGATGTAATAACATCCAAAAATTTTGAGGCTCAAAAAAAAAAAA                                                    ]




>consensus_11515#2
GCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATATCTGGGCCA
AGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGATGCCGCTTGC
GCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTGGGAGCTTCC
GGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGTGTTATCTCT
AGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTAATTTCATCC
AGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAGGGAACCTAT
CATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTACTACGAGTG
ATGTAATAACATCCAAAAATTTTGAGGCTCAAAACAAAAAAAAAACAAATATACCCACTA
CTCTACTCACATTATTCCCTTTATATTATCACAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11515#0      AGTTGCATCGATCGATCCTTGGCGATCGATCGAGCTAGCTGCTGCGAAAATGGCGGCCTC 60
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CTCCTTCCTCGTTGAGTGCCTGTCATGGCTTGTCGTCGTCCTCTTCTCCCTGTACATCTT 120
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CCAGCTTCTCCGCGACGCCCGCCGCCGCCTCCCCCCGGGTCCCTGGCCGCCGAAGCCGCT 180
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CGTCGGCGACCTCCTCGACCTCGGCGAGGACGGCAAGCAGCACCGCACGTTCCTCCGCCT 240
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CGCCGGCCGCTACGGCGGCCTCATGTGCCTCCGCTTCGGCATGGTGCCCCACGTGATCGT 300
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CTCCACCCCGGACGCCCTGCGCGCGGTGTTCGCCGCCGCCGGCGCCGGCGGCGGCGGCGG 360
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CGGGGAAGGCAAGAAGGTGGATGGCATCGCGGGCCTCCCGAGCCTCGACGTGCTCAGCGC 420
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CATGGGCCACCGCGCGCACACCATCTTCGCGCTCCCGAGCCAGGACGGCAAGTGGCGCGC 480
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      GCTCCGCAAGTTCGCCGCCGCCGAGATGCTCGCGCCGCGGCGGATCTCGTCCGCGGCGGC 540
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CGGCGCGCAGCTGCAGACCAAGATCGTGGAGGCGCTCCGCCGCGAGGTGTCCGGGCACGC 600
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      GGCGCGGGGCGCCGCCGTGGTGTTCAGGCACGCGGTGCTCGACTCCATCCTGAGCCTCCT 660
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CCTCGGCGTGCTCTACTCCACCGACCTGGAGCGCGAGGAGCGCGCCATGTTCAGGGACCT 720
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CATTGAGGAGATCGTCGGGATGCTGGGGACGGCGAACGTCTCCGACGTGTTCCCGCCGGT 780
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      GGCCGCGCTCGACCTCCAGGGCCTCCGCCGCAGGATGACCGACCTCCTCACCATCATGTA 840
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CCGCCACTTCGACGACCAGGTCGCCCTGCGGCGGCGCAGCCGGGACGCCGGCGAGGCGCG 900
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CAAGAACGACGTGCTCGACACCGTCCTCGACAAGGAGGAGAGCGAGTGGAAGCAGGAGGG 960
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      CTCCCTGCTAAGCCATGACGTCATGCGAGTTCTCCTCTCCGATTTATACGGCGCTGGAGC 1020
consensus_11515#1      ------------------------------------------------------------
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      AAGCACGACAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGT 1080
consensus_11515#1      --------CAGCAGCGCTAATCGAGTGGGGAATGGTGGATCTAATCCAGAACCCAGAGGT 52
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      GATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGA 1140
consensus_11515#1      GATGACCAAGGTAAGGGAAGAGCTTACCAATGTTCTCGGGGACAAGCTGGTGATGGACGA 112
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      ATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCG 1200
consensus_11515#1      ATCCGACATTGCCCGCCTCCCCTACCTTCAAGCTGTCGTCAAGGAGACCCTTCGTCTCCG 172
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      AACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAG 1260
consensus_11515#1      AACGGTGGTACCCTTGGTACCCCGCAAGGCTGAGGTCGACATCGAGGTGAACGGCTATAG 232
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      GATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGC 1320
consensus_11515#1      GATCCCCAAGGGGACCAACGTGATCCTCAACGCGTGGGCGATCAACCGGAGTGCCGACGC 292
consensus_11515#2      ------------------------------------------------------------
                                                                                   

consensus_11515#0      GTGGTCGGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATA 1380
consensus_11515#1      GTGGTCAGAGCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATA 352
consensus_11515#2      ---------GCCGGACAAGTTCATACCAGAGAGGTTCCTCGGTGGCGAGACTAGGGGATA 51
                                ***************************************************

consensus_11515#0      TCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGAT 1440
consensus_11515#1      TCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGAT 412
consensus_11515#2      TCTGGGCCAAGACTTCGAAATGATCCCCTTCGGCCTCGGCCGGCGCATCTGCCCCGGGAT 111
                       ************************************************************

consensus_11515#0      GCCGCTTGCTCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTG 1500
consensus_11515#1      GCCGCTTGCGCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTG 472
consensus_11515#2      GCCGCTTGCGCAGAAGCTCATACCCCTCATCATCGGCACGCTACTCCATCGGTTCGAGTG 171
                       ********* **************************************************

consensus_11515#0      GGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGT 1560
consensus_11515#1      GGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGT 532
consensus_11515#2      GGAGCTTCCGGCGGATGCAAAGGAGGGTGGGATAGACATGACGGAGAAGTGTGGGGTGGT 231
                       ************************************************************

consensus_11515#0      GTTATCTCTAGTTAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTA 1620
consensus_11515#1      GTTATCTCTAGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTA 592
consensus_11515#2      GTTATCTCTAGTCAACCCCCTCAAAGCCATACCCAAGGAAATATGAGTTATATTCGGTTA 291
                       ************ ***********************************************

consensus_11515#0      ATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAG 1680
consensus_11515#1      ATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAG 652
consensus_11515#2      ATTTCATCCAGTAATCCATTGTTTGTAAGTGTCATAGTACATGAGATCTTTAGGGACTAG 351
                       ************************************************************

consensus_11515#0      GGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCAAAAAA 1740
consensus_11515#1      GGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTA 712
consensus_11515#2      GGAACCTATCATACTGAAATAAATTTAAATAAGCCTGATAACTCTTTGTATCCCATTCTA 411
                       *******************************************************    *

consensus_11515#0      AAAAAAAAA--------------------------------------------------- 1749
consensus_11515#1      CTACGAGTGATGTAATAACATCCAAAAATTTTGAGGCTCAACTTAATTTTTTTGAGTAAA 772
consensus_11515#2      CTACGAGTGATGTAATAACATCCAAAAATTTTGAGGCTCAAAACAAAAAAAAAACAAATA 471
                         *  *                                                      

consensus_11515#0      -------------------------------------------
consensus_11515#1      TTTTAAAAAAAAAG----------------------------- 786
consensus_11515#2      TACCCACTACTCTACTCACATTATTCCCTTTATATTATCACAT 514