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Oryza sativa
cluster # 11523 cluster # 11523       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11523#0 length = 1486 sequences # 2  
consensus_11523#1 length = 481 sequences # 5  
consensus_11523#2 length = 479 sequences # 1  
consensus_11523#3 length = 223 sequences # 1  

consensusID : consensus_11523#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1486
fasta sequence
                              [TTTGGTCAGGAGTGGATCGCCTGACCGCCGCGCCGCTGACCAGACGGCGCCGTGCTCCACTCTAAGTCGCCGGAGCTCCGCGTCCTGCCCGGCGCCCGACTACGTATGTTCCCCTCTCCGCTGCTTCCACGCGCGTCCAGAGGCCCGAAGCTTGCCTCCCCGTCCACCTGCGGAGCAATCTGCTCGGCATCAGTCTCCTCTCGCCTCGCACGCAAGTTGTTCGACGAAATGCCGGGGCGGGACAAGATCCCGCCGCGCGCGTAATTGAAGATGATCCCCAAGAACCGAGGGTGGCGGATTCGCGAAGGGGCCCGCGGCCGGACCACCCCCGTTACGGCGGTGCTCCAGTTGCTGCCGACGCCGGGTGGTGTCCGGCAGGTGTGCACTTTGACGTCTACGGTTTCGGCATCGTCGTCCTCAAGATCGCCCCCGGCCGGCGCCACGTGTCTCAGCCATGCCAGGGCAGGTCGGCTAGCTTTTTGCTCGCCGCGACGTGGAGGTCAGGCGACGCGAAGCCGATGGATCCTTCTTCCTCCCGGTCGACTGCCGTGTCAGCAACTCCAGGTGGAGAAACGACTGGTCAAACTCAAACAGTCTCATATCTTCTAGCTCTTCAACCATGTCAAAGAGTTGCTGAAGAGAGGAGGGCCGGAGAATGATCAAATCAAGAACCACCGCACGAAAACATCCAAGGATTGTTTTGCTAAGATATAAGCAAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCATCGATCGATCACTCCCCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGGAGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGCAGCTGCAGCTTGAGGAGGAGCTCCCTGGCCTCCTCCTCCTCCTTCTTGATCCTCATCACCTGGCTGTGGATCAGGTACACTCCATCCTGCTGCTGCTGCTGCTCCAGATAATCCCCGACCGCTGATCTTCTTGCTCCCTGCAGCTGATCCCTCCCCTCCATTGGAGCTGACCTCGAAATCGCCATGGAATTAAATCTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACAGGTGTTCTTGTTGTTGTTTAGCCACAGGAGAAACTTGATATATATAGAGAGAGAGATGAAGAAGAAGATCAGGGGGGGGGGGGGGGGGACTGGAGAGAGATGGTCAGGGTTCGCTTGCTTGTGAGGTGATTTTTGGCGGGAAAGCGACGGCGATGGCGCGAGAGGGAGGAAACGTGGGGCGGTTTCCCAGCAGTCGTTTTAGCGGTTGGGGGAGTGGGGAAAGAGGACGCCACGGTTGGCTTTGGCTATCCATCTGGACCAAGGACAAATCTCCGCGTTTTTTTTTCAATGAAATATATTTT]

[+] EMBL AK106327             [TTTGGTCAGGAGTGGATCGCCTGACCGCCGCGCCGCTGACCAGACGGCGCCGTGCTCCACTCTAAGTCGCCGGAGCTCCGCGTCCTGCCCGGCGCCCGACTACGTATGTTCCCCTCTCCGCTGCTTCCACGCGCGTCCAGAGGCCCGAAGCTTGCCTCCCCGTCCACCTGCGGAGCAATCTGCTCGGCATCAGTCTCCTCTCGCCTCGCACGCAAGTTGTTCGACGAAATGCCGGGGCGGGACAAGATCCCGCCGCGCGCGTAATTGAAGATGATCCCCAAGAACCGAGGGTGGCGGATTCGCGAAGGGGCCCGCGGCCGGACCACCCCCGTTACGGCGGTGCTCCAGTTGCTGCCGACGCCGGGTGGTGTCCGGCAGGTGTGCACTTTGACGTCTACGGTTTCGGCATCGTCGTCCTCAAGATCGCCCCCGGCCGGCGCCACGTGTCTCAGCCATGCCAGGGCAGGTCGGCTAGCTTTTTGCTCGCCGCGACGTGGAGGTCAGGCGACGCGAAGCCGATGGATCCTTCTTCCTCCCGGTCGACTGCCGTGTCAGCAACTCCAGGTGGAGAAACGACTGGTCAAACTCAAACAGTCTCATATCTTCTAGCTCTTCAACCATGTCAAAGAGTTGCTGAAGAGAGGAGGGCCGGAGAATGATCAAATCAAGAACCACCGCACGAAAACATCCAAGGATTGTTTTGCTAAGATATAAGCAAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCATCGATCGATCACTCCCCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGGAGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGCAGCTGCAGCTTGAGGAGGAGCTCCCTGGCCTCCTCCTCCTCCTTCTTGATCCTCATCACCTGGCTGTGGATCAGGTACACTCCATCCTGCTGCTGCTGCTGCTCCAGATAATCCCCGACCGCTGATCTTCTTGCTCCCTGCAGCTGATCCCTCCCCTCCATTGGAGCTGACCTCGAAATCGCCATGGAATTAAATCTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACAGGTGTTCTTGTTGTTGTTTAGCCACAGGAGAAACTTGATATATATAGAGAGAGAGATGAAGAAGAAGATCAGGGGGGGGGGGGGGGGGACTGGAGAGAGATGGTCAGGGTTCGCTTGCTTGTGAGGTGATTTTTGGCGGGAAAGCGACGGCGATGGCGCGAGAGGGAGGAAACGTGGGGCGGTTTCCCAGCAGTCGTTTTAGCGGTTGGGGGAGTGGGGAAAGAGGACGCCACGGTTGGCTTTGGCTATCCATCTGGACCAAGGACAAATCTCCGCGTTTTTTTTTCAATGAAATATATTTT]
[-] EMBL D43016               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATCACCTGGCTGTGGATNAGGTACACTCCATCCTGCTGCTGCTGCTGCNCCAGATAATCCCCGACCGCTGATCTTCTTGCTCCCTGCAGCTGANNCCTCTCCTCCATTGGAGCTGACCTCGAAATCGCCATGGAATTAAATCTCAATTGCTTCTGCTGCTGCTGCTCAAT                                                                                                                                                                                                                                                                                                                             ]


>consensus_11523#0 TTTGGTCAGGAGTGGATCGCCTGACCGCCGCGCCGCTGACCAGACGGCGCCGTGCTCCAC TCTAAGTCGCCGGAGCTCCGCGTCCTGCCCGGCGCCCGACTACGTATGTTCCCCTCTCCG CTGCTTCCACGCGCGTCCAGAGGCCCGAAGCTTGCCTCCCCGTCCACCTGCGGAGCAATC TGCTCGGCATCAGTCTCCTCTCGCCTCGCACGCAAGTTGTTCGACGAAATGCCGGGGCGG GACAAGATCCCGCCGCGCGCGTAATTGAAGATGATCCCCAAGAACCGAGGGTGGCGGATT CGCGAAGGGGCCCGCGGCCGGACCACCCCCGTTACGGCGGTGCTCCAGTTGCTGCCGACG CCGGGTGGTGTCCGGCAGGTGTGCACTTTGACGTCTACGGTTTCGGCATCGTCGTCCTCA AGATCGCCCCCGGCCGGCGCCACGTGTCTCAGCCATGCCAGGGCAGGTCGGCTAGCTTTT TGCTCGCCGCGACGTGGAGGTCAGGCGACGCGAAGCCGATGGATCCTTCTTCCTCCCGGT CGACTGCCGTGTCAGCAACTCCAGGTGGAGAAACGACTGGTCAAACTCAAACAGTCTCAT ATCTTCTAGCTCTTCAACCATGTCAAAGAGTTGCTGAAGAGAGGAGGGCCGGAGAATGAT CAAATCAAGAACCACCGCACGAAAACATCCAAGGATTGTTTTGCTAAGATATAAGCAAGC TAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCA TCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCATCGATCGATCACTCC CCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGGAGC GTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGCAGCTGCAGCTTGAGG AGGAGCTCCCTGGCCTCCTCCTCCTCCTTCTTGATCCTCATCACCTGGCTGTGGATCAGG TACACTCCATCCTGCTGCTGCTGCTGCTCCAGATAATCCCCGACCGCTGATCTTCTTGCT CCCTGCAGCTGATCCCTCCCCTCCATTGGAGCTGACCTCGAAATCGCCATGGAATTAAAT CTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACAGGTGTTCTTGTTGTTG TTTAGCCACAGGAGAAACTTGATATATATAGAGAGAGAGATGAAGAAGAAGATCAGGGGG GGGGGGGGGGGGACTGGAGAGAGATGGTCAGGGTTCGCTTGCTTGTGAGGTGATTTTTGG CGGGAAAGCGACGGCGATGGCGCGAGAGGGAGGAAACGTGGGGCGGTTTCCCAGCAGTCG TTTTAGCGGTTGGGGGAGTGGGGAAAGAGGACGCCACGGTTGGCTTTGGCTATCCATCTG GACCAAGGACAAATCTCCGCGTTTTTTTTTCAATGAAATATATTTT



consensusID : consensus_11523#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 481
fasta sequence
                              [CGGCAAGACAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCATCGATCGATCACTCCCCGACCGGNATGGCGCCGCCGGCGCGGCGGAGCGGGGANAGCGACCGGAATGCCCGGAGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTNTCCAGCAGCTGCAGCTTGAGGGAGGAGCTCCCTGGCCTCCTCCTCCTCCTTTTTGATCCTCATCACCTGGCTGNGGATCA]

[-] EMBL CF315511             [CGGCAAGACAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCT                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF307911             [                                 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT        TAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATATACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCAT                                                                                                                                                                                                 ]
[-] EMBL AU173947             [                                                              TTTTTTTTTTTTTTTTTTNGCTAANATATAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGNGNGCTACAACCAACAGCTAAAGCTNTGAACCATGCANATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTNTCCGATCTCAC AAAAAAAAAAAGATCATCATCGATCGATCACTCCCCGACCGGNATGGCGCCGCCGGCGCGGCGGAGCGGGGANAGCGACCGGAATGCCCGGAGCGTCGT                                                                                                                  ]
[-] EMBL AT003427             [                                                                                              tttttttttTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCATCGATCGATCACTCCCCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGGAGCGTNGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTNTCCAGCAGCTGCAGCTTGAGGGAGGAGCTCCCTGGCCTCCTCCTCCTCCTTTTTGATCCTCATCACCTGGCTGNGGATCA]
[-] EMBL CF305139             [                                                                                                                                                                                                                                      CATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCATCGATCGATCACTCCC                                                                                                                                                                                  ]


>consensus_11523#1 CGGCAAGACAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGCAAGGTAAGTAAACTCGATCACTGAT ATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACA GCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGG CATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAGATCATCATCGATCGATCACT CCCCGACCGGNATGGCGCCGCCGGCGCGGCGGAGCGGGGANAGCGACCGGAATGCCCGGA GCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTNTCCAGCAGCTGCAGCTTGA GGGAGGAGCTCCCTGGCCTCCTCCTCCTCCTTTTTGATCCTCATCACCTGGCTGNGGATC A



consensusID : consensus_11523#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence
                              [TCCAAGGATTGTTTTGCTAAGATATAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAAGATCATCATCGATCGATCACTCCCCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGGAGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGATAATCCCCGACCGCTGATCTTCTTGCTCCCTGCAGCTGATCCCTCTCCTCCATTGGAGCTGACCTCGAAATCGCCATGGAATTAAATCTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACAGGTGTT]

[-] EMBL AK062784             [TCCAAGGATTGTTTTGCTAAGATATAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAAGATCATCATCGATCGATCACTCCCCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGGAGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGATAATCCCCGACCGCTGATCTTCTTGCTCCCTGCAGCTGATCCCTCTCCTCCATTGGAGCTGACCTCGAAATCGCCATGGAATTAAATCTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACAGGTGTT]


>consensus_11523#2 TCCAAGGATTGTTTTGCTAAGATATAAGCAAGGTAAGTAAACTCGATCACTGATATTTTA CAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAA GCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAG GTACTAACTCTCCGATCTCACAAAAAAAAAAAAAGATCATCATCGATCGATCACTCCCCG ACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGGAGCGTC GTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGATAATCCCCGACCGCTGAT CTTCTTGCTCCCTGCAGCTGATCCCTCTCCTCCATTGGAGCTGACCTCGAAATCGCCATG GAATTAAATCTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACAGGTGTT



consensusID : consensus_11523#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 223
fasta sequence
                              [GCTTTTTCTAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAAAAAACACTGTCATAATACGACGCAG]

[-] EMBL CF313108             [GCTTTTTCTAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAAAAAACACTGTCATAATACGACGCAG]


>consensus_11523#3 GCTTTTTCTAAGCAAGGTAAGTAAACTCGATCACTGATATTTTACAACACAAACAAGAGA GGGGAATAACATGTACATCTGGTGTGCTACAACCAACAGCTAAAGCTCTGAACCATGCAG ATAGACATCACAGTAAACAGCATGTCAGCATGGACAGGCATCAGGTACTAACTCTCCGAT CTCACAAAAAAAAAAAAAAAAACACTGTCATAATACGACGCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      TTTGGTCAGGAGTGGATCGCCTGACCGCCGCGCCGCTGACCAGACGGCGCCGTGCTCCAC 60
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      TCTAAGTCGCCGGAGCTCCGCGTCCTGCCCGGCGCCCGACTACGTATGTTCCCCTCTCCG 120
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      CTGCTTCCACGCGCGTCCAGAGGCCCGAAGCTTGCCTCCCCGTCCACCTGCGGAGCAATC 180
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      TGCTCGGCATCAGTCTCCTCTCGCCTCGCACGCAAGTTGTTCGACGAAATGCCGGGGCGG 240
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      GACAAGATCCCGCCGCGCGCGTAATTGAAGATGATCCCCAAGAACCGAGGGTGGCGGATT 300
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      CGCGAAGGGGCCCGCGGCCGGACCACCCCCGTTACGGCGGTGCTCCAGTTGCTGCCGACG 360
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      CCGGGTGGTGTCCGGCAGGTGTGCACTTTGACGTCTACGGTTTCGGCATCGTCGTCCTCA 420
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      AGATCGCCCCCGGCCGGCGCCACGTGTCTCAGCCATGCCAGGGCAGGTCGGCTAGCTTTT 480
                                                                                   

consensus_11523#1      -------------------------------------------------------CGGCA 5
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      TGCTCGCCGCGACGTGGAGGTCAGGCGACGCGAAGCCGATGGATCCTTCTTCCTCCCGGT 540
                                                                                   

consensus_11523#1      AGACAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 65
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      CGACTGCCGTGTCAGCAACTCCAGGTGGAGAAACGACTGGTCAAACTCAAACAGTCTCAT 600
                                                                                   

consensus_11523#1      TTTTTTTTTTTTTTTTTTTTTTTTTTAAG-----CAAGGTAAGTAAACTCGATCACTGAT 120
consensus_11523#3      -----------------GCTTTTTCTAAG-----CAAGGTAAGTAAACTCGATCACTGAT 38
consensus_11523#2      -TCCAAGGATTGTTTTGCTAAGATATAAG-----CAAGGTAAGTAAACTCGATCACTGAT 54
consensus_11523#0      ATCTTCTAGCTCTTCAACCATGTCAAAGAGTTGCTGAAGAGAGGAGGGCCGGAGAATGAT 660
                                                 *         * *  ** *    **   * ****

consensus_11523#1      ATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACA 180
consensus_11523#3      ATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACA 98
consensus_11523#2      ATTTTACAACACAAACAAGAGAGGGGAATAACATGTACATCTGGTGTGCTACAACCAACA 114
consensus_11523#0      CAAATCAAGAACCACCGCACGAAAACATCCAAGGATTGTTTTGCTAAGATATAAGCAA-- 718
                           *  *  ** * *    **    *   *    *   * ** *  * ** ** ***  

consensus_11523#1      GCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGG 240
consensus_11523#3      GCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGG 158
consensus_11523#2      GCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGG 174
consensus_11523#0      GCTAAAGCTCTGAACCATGCAGATAGACATCACAGTAAACAGCATGTCAGCATGGACAGG 778
                       ************************************************************

consensus_11523#1      CATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAA-GATCATCATCGATCGATCAC 299
consensus_11523#3      CATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAA-AAAAA-CACTGTCATAATAC 216
consensus_11523#2      CATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAAAGATCATCATCGATCGATCAC 234
consensus_11523#0      CATCAGGTACTAACTCTCCGATCTCACAAAAAAAAAAAA-GATCATCATCGATCGATCAC 837
                       ***************************************  *  * **  *    *  **

consensus_11523#1      TCCCCGACCGGNATGGCGCCGCCGGCGCGGCGGAGCGGGGANAGCGACCGGAATGCCCGG 359
consensus_11523#3      GACGCAG----------------------------------------------------- 223
consensus_11523#2      TCCCCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGG 294
consensus_11523#0      TCCCCGACCGGGATGGCGCCGCCGGCGCGGCGGAGCGGGGAGAGCGACCGGGATGCCCGG 897
                         * *                                                       

consensus_11523#1      AGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTNTCCAGCAGCTGCAGCTTG 419
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      AGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGATAATCCCCGACC 354
consensus_11523#0      AGCGTCGTCGCCGGGCAGCGGCCGCCGCCGGCCGGCCGCGTCTCCAGCAGCTGCAGCTTG 957
                                                                                   

consensus_11523#1      AGGGAGGAGCTCCCTGGCCTCCTCCTCCTCCTTTTTGATCCTCATCACCTGGCTGNGGAT 479
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      GCTGATCTTCTTGCTC-CCTGCAGCTGATCCCTCTCCTCCATTGGAGCTGACCTCGAAAT 413
consensus_11523#0      AG-GAGGAGCTCCCTGGCCTCCTCCTCCTCCTTCTTGATCCTCATCACCTGGCTGTGGAT 1016
                                                                                   

consensus_11523#1      CA---------------------------------------------------------- 481
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      CGCCATGGAATTAAATCTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACA 473
consensus_11523#0      CAGGTACACTCCATCCTGCTGCTGCTGCTGCTCCAGATAATCCCCGACCGCTGATCTTCT 1076
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      GGTGTT------------------------------------------------------ 479
consensus_11523#0      TGCTCCCTGCAGCTGATCCCTCCCCTCCATTGGAGCTGACCTCGAAATCGCCATGGAATT 1136
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      AAATCTCAATTGCTTCTGCTGCTGCTGCTCAATTGTTGTGATGACACAGGTGTTCTTGTT 1196
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      GTTGTTTAGCCACAGGAGAAACTTGATATATATAGAGAGAGAGATGAAGAAGAAGATCAG 1256
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      GGGGGGGGGGGGGGGGACTGGAGAGAGATGGTCAGGGTTCGCTTGCTTGTGAGGTGATTT 1316
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      TTGGCGGGAAAGCGACGGCGATGGCGCGAGAGGGAGGAAACGTGGGGCGGTTTCCCAGCA 1376
                                                                                   

consensus_11523#1      ------------------------------------------------------------
consensus_11523#3      ------------------------------------------------------------
consensus_11523#2      ------------------------------------------------------------
consensus_11523#0      GTCGTTTTAGCGGTTGGGGGAGTGGGGAAAGAGGACGCCACGGTTGGCTTTGGCTATCCA 1436
                                                                                   

consensus_11523#1      --------------------------------------------------
consensus_11523#3      --------------------------------------------------
consensus_11523#2      --------------------------------------------------
consensus_11523#0      TCTGGACCAAGGACAAATCTCCGCGTTTTTTTTTCAATGAAATATATTTT 1486
                                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)