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Oryza sativa
cluster # 11536 cluster # 11536       Sequences # 9       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11536#0 length = 1406 sequences # 9  
consensusID : consensus_11536#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1406
fasta sequence 
                              [CCGGCCAATTTCCATCGCAGCCATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG-TGTGCATAAACTG-TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG-TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGTATGTTGGTTCAGATTTGTCTTCGTTTTACAGTAAGTGGGCAAACTTATCAACTGAAGATTCAATAAGCT]

[+] EMBL AK069502             [CCGGCCAATTTCCATCGCAGCCATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGGCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTAAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATG                                                                                                                       ]
[+] EMBL AK104170             [                   GCCATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGATGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCCTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTG                                                                                                                                                                                                           ]
[+] EMBL AK059316             [                      ATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGT                                                                     ]
[+] EMBL AK104287             [                      ATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACATGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAAC                                                                                                                                                       ]
[+] EMBL AU069162             [                                       CCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATNGGAGGGGCGCACTTCCCCGGTGAGGCCGAGGTGGTGGCCGGGGAGGGCGACG CGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCNGGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACANCCGGTGTCACAAGTTGTNCATAAACTGTTGGTGTCAATATGGGNGAGTACTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB630235             [                                                       TTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB630236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCTGTAGATAACATGCCACGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATATTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGTATGTTGGTTCAGATTTGTCTTCGTTTTACAGTAAGTGGGCAAACTTATCAACTGAAGATTCAATAAGCT]
[-] EMBL CA762297             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         aggacgagACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCCCTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTTTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATTTACAGTTTAGACAAACAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTTTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGGTTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGTATGTTGGT                                                             ]
[+] EMBL AU069163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tcCCATGTGATTGCCCACAAGTGCAGCCCATGC ACTCGTTAC ATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAG TCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTTTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAAaaaa                                                                                                 ]




>consensus_11536#0
CCGGCCAATTTCCATCGCAGCCATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTAC
ATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGA
GGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCC
CTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATC
GTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCT
TCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGT
GATACTGAACAGCCGGTGTCACAAGTGTGCATAAACTGTGGTGTCAATATGGGAGAGTAC
TTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTAC
GATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGG
TCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAG
AATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGAC
TGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACT
TGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAA
GAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAAT
GACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGC
AACTCGTACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCC
TCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAA
GATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACA
TTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCT
TGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTT
GTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAACCCATC
ATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTC
TACATGTTGATGATTGTATGTTGGTTCAGATTTGTCTTCGTTTTACAGTAAGTGGGCAAA
CTTATCAACTGAAGATTCAATAAGCT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)