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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11541#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2362 fasta sequence
[GTTTCTTTCTGCTCTGTTGCAGCTCCGTTGTCTATGGTAGGTACCTTTTGGACGGAGGTTTTGCATTTGCCTAGTTACTAGTAACTGCATAATTAACAGGAGGAGTACTACCAAGAATGCATACTAATTATTCGCGTGATATTTTGTACGTTTAAGTTTAGAGAACCCGGGATTCGACCAGACCATCAGTCCACTCTCTCTCTCTCTCTGCTTCTTCTTGTGTTGTGCTTGTGCCTCCTCATTATTAATATCTGTACTCCATATTCTACTACTGCATGCTGGAGTACTCTGGTCATGGAGCATTTGACATTTGCATCCACCCCGATGAGCTGAGCTGCTCCATTAATATACTATTCCTCCTCAATTAGTCATTCACTACATACATACAGCAAAATCCTAGCACCACGACGGCGGCCGCATTTGTATGAAATCGATAGATCGTCTCTCTCTCTCTCTCATCCAACCAACCACGCACAGCGACTCAGCGAGCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGG-GTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGATGATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATG--ATACCACGACCCAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACATTTTAAAATAAAGATATATAGTATGCC]
[+] EMBL AK069021 [GTTTCTTTCTGCTCTGTTGCAGCTCCGTTGTCTATGGTAGGTACCTTTTGGACGGAGGTTTTGCATTTGCCTAGTTACTAGTAACTGCATAATTAACAGGAGGAGTACTACCAAGAATGCATACTAATTATTCGCGTGATATTTTGTACGTTTAAGTTTAGAGAACCCGGGATTCGACCAGACCATCAGTCCACTCTCTCTCTCTCTCTGCTTCTTCTTGTGTTGTGCTTGTGCCTCCTCATTATTAATATCTGTACTCCATATTCTACTACTGCATGCTGGAGTACTCTGGTCATGGAGCATTTGACATTTGCATCCACCCCGATGAGCTGAGCTGCTCCATTAATATACTATTCCTCCTCAATTAGTCATTCACTACATACATACAGCAAAATCCTAGCACCACGACGGCGGCCGCATTTGTATGAAATCGATAGATCGTCTCTCTCTCTCTCTCATCCAACCAACCACGCACAGCGACTCAGCGAGCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGG GTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGATGATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATG ATACCACGACCCAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACATTTTAAAATAAAGAT ]
[+] EMBL CB637689 [ TTGCATCCACCCCGATGAGCTGAGCTGCTCCATTAATATACTATTCCTCCTCAATTAGTCATTCACTACATACATACAGCAAAATCCTAGCACCACGACGGCGGCCGCATTTGTATGAAATCGATAGATCGTCTCTCTCTCTCTCTCATCCAACCAACCACGCACAGCGACTCAGCGAGCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGGNGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGA ]
[+] EMBL CB664940 [ ATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGATGATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCCATG ]
[+] EMBL CB681926 [ CGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGATGATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAG ]
[-] EMBL CB664941 [ TTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATG ATACCACGACCCAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACATTTTAAAATAAAGATATATAGTATG ]
[-] EMBL CB629335 [ TGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGTTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAGCAAATTACTCACAGGCAGACCGCAGAAGCAGAAACGTACGTACATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATGATATACCACGACCCAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTCGTTTATATTTATCTTTTTCAAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACATTTTAAAATAAAGATATATAGTATGCC]
[-] EMBL CB637690 [ CGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATG ATACCACGACCCAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACATTTTAAAATAAAGAAATATA ]
consensusID : consensus_11541#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1906 fasta sequence
[AATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGATGATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATGATACCACGACCCAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACATTTTAAAATAAAGAT]
[+] EMBL AK072134 [AATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGATGATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATGATACCACGACCCAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACATTTTAAAATAAAGAT]
consensusID : consensus_11541#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 798 fasta sequence
[CTCTCCCTTCCAACCAACCACGCACAGCGACTCAGCGAGCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGTAAGCTCCCTTAACTAATTCCTACCATGCTCAGATAATGTACATCATGCATGCATGCAACCATATACTCTTCTGATCATAAGTCGTTCTGATTTTTTTCTAAATTAATCTTCTTTAGTTTTAATTAACTTTATAATAATATTTTTAACATAAAACAAGAAAAAATATAAAATATATTGAATGTTAGTTTTAATAAAATTAATTTAATGCTGTAAATATTAATATATTTTTTTATAAACTTGATCGAACTTTTAGAAAAGTCAAAGTGACTTATAAGTATAAATGGGGGAGAGTAATTATAATAGTGATCTTGAATTTTGTGACAATTAATTGGTTGCGTGTATGCATGCAGGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGA]
[+] EMBL CB629334 [CTCTCCCTTCCAACCAACCACGCACAGCGACTCAGCGAGCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGTAAGCTCCCTTAACTAATTCCTACCATGCTCAGATAATGTACATCATGCATGCATGCAACCATATACTCTTCTGATCATAAGTCGTTCTGATTTTTTTCTAAATTAATCTTCTTTAGTTTTAATTAACTTTATAATAATATTTTTAACATAAAACAAGAAAAAATATAAAATATATTGAATGTTAGTTTTAATAAAATTAATTTAATGCTGTAAATATTAATATATTTTTTTATAAACTTGATCGAACTTTTAGAAAAGTCAAAGTGACTTATAAGTATAAATGGGGGAGAGTAATTATAATAGTGATCTTGAATTTTGTGACAATTAATTGGTTGCGTGTATGCATGCAGGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11541#0 GTTTCTTTCTGCTCTGTTGCAGCTCCGTTGTCTATGGTAGGTACCTTTTGGACGGAGGTT 60
consensus_11541#1 ------------------------------------------------------------
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 TTGCATTTGCCTAGTTACTAGTAACTGCATAATTAACAGGAGGAGTACTACCAAGAATGC 120
consensus_11541#1 ------------------------------------------------------------
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 ATACTAATTATTCGCGTGATATTTTGTACGTTTAAGTTTAGAGAACCCGGGATTCGACCA 180
consensus_11541#1 ------------------------------------------------------------
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 GACCATCAGTCCACTCTCTCTCTCTCTCTGCTTCTTCTTGTGTTGTGCTTGTGCCTCCTC 240
consensus_11541#1 ------------------------------------------------------------
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 ATTATTAATATCTGTACTCCATATTCTACTACTGCATGCTGGAGTACTCTGGTCATGGAG 300
consensus_11541#1 ------------------------------------------------------------
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 CATTTGACATTTGCATCCACCCCGATGAGCTGAGCTGCTCCATTAATATACTATTCCTCC 360
consensus_11541#1 -------------------------------------------AATCGGCCTCGTTCCTC 17
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 TCAATTAGTCATTCACTACATACATACAGCAAAATCCTAGCACCACGACGGCGGCCGCAT 420
consensus_11541#1 TTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATT----GCATT-TTACACCGGTCCTAC 72
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 TTGTATGAAATCGATAGATCGTCTCTCTCTCTCTCTCATCCAACCAACCACGCACAGCGA 480
consensus_11541#1 T-GTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTG- 130
consensus_11541#2 ------------------------------CTCTCCCTTCCAACCAACCACGCACAGCGA 30
* * * * * * *
consensus_11541#0 CTCAGCGA-GCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGGAGTCG 539
consensus_11541#1 -TTGGCGCTGCGAGAAGGAA----AGATTGA-GGTGGTGAAATGCTCCCTGCTGGGATCC 184
consensus_11541#2 CTCAGCGA-GCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGGAGTCG 89
* *** ***** * ** ** **** * *** * ** *** **
consensus_11541#0 AATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGC 599
consensus_11541#1 ATCCTCTCCAACCTGCTGCTTGTCCT-CGGCACCTCCCTCTTCCTCGCCGGCATCGCCAA 243
consensus_11541#2 AATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGC 149
* * * * * * * * ******* ** ***** * * *****
consensus_11541#0 CGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTC 659
consensus_11541#1 C-CTCCGCGCCCA-CCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTC 301
consensus_11541#2 CGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTC 209
* * **** * ** ** * * * ** * * * ** ** ********
consensus_11541#0 CACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTC 719
consensus_11541#1 ------ATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACC 355
consensus_11541#2 CACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTC 269
* * * ** * * ** ****** * ** **** *** * ** *
consensus_11541#0 ACCACCAGGCTCTTCCTCCTCTTCCCCG---CCGTCCTCCTCGCCATCGCCGCCACTTAC 776
consensus_11541#1 TCCGGCGACCACGCCATCGTCTCCGGCGACGCCGTCCTCCTCGCCATCGCCGCCACTTAC 415
consensus_11541#2 ACCACCAGGCTCTTCCTCCTCTTCCCCG---CCGTCCTCCTCGCCATCGCCGCCACTTAC 326
** * * * * ** *** * ** *****************************
consensus_11541#0 CTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCT 836
consensus_11541#1 CTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCT 475
consensus_11541#2 CTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCT 386
************************************************************
consensus_11541#0 GAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGA 896
consensus_11541#1 GAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGA 535
consensus_11541#2 GAGCGACTCAGCTTCCTCACCGAGTAAGCTCC--CTTAACTAATTCCTACCATGCTCAGA 444
************************ * * * *** ****** ** **
consensus_11541#0 CTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGA 956
consensus_11541#1 CTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGA 595
consensus_11541#2 -TAATGTACAT--CATGCATGCATGCAAC--------CATATACTCTTCTGATCAT---- 489
** ** ** *** * * * ** * * ** ** *
consensus_11541#0 GAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTG 1016
consensus_11541#1 GAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTG 655
consensus_11541#2 -------------AAGTCGTT--CTGATTTTTTTCTAAATTAATCTTCTTTAGTTT--TA 532
* ** ** ** * * ** *** *** * * *
consensus_11541#0 CTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCG 1076
consensus_11541#1 CTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCG 715
consensus_11541#2 ATTAACTTTATAAT----------------AATATTTTTAACATAAAACAAGAAAAAATA 576
** * * * ** *** * * *
consensus_11541#0 TACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCAC 1136
consensus_11541#1 TACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCAC 775
consensus_11541#2 TAAAATATATTGAATGTTAGTTTTAATAAAATTAATTTAATGCTGTAAATATTAATATAT 636
** * * * * * * * ** * * ***** * * *
consensus_11541#0 TCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGC 1196
consensus_11541#1 TCCCTGC----------------------------------------------------- 782
consensus_11541#2 TTTTTTATA--------------------------------------------------- 645
* *
consensus_11541#0 GACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCC 1256
consensus_11541#1 ------------------------------AGCATCCTCATGCTCATCGCCTACCTGGCC 812
consensus_11541#2 ---------------------------------------------------AACTTGATC 654
** ** *
consensus_11541#0 TACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGAT 1316
consensus_11541#1 TACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGAT 872
consensus_11541#2 GAACT-TTTAGAAAAGTCAAAGTGACTTATAAGT-------------ATAAATGGGGGAG 700
* ** ** ** **** * * ** * * * * ***
consensus_11541#0 GATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGT 1376
consensus_11541#1 GATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGT 932
consensus_11541#2 AGTAATTATAAT-----AGTGATC-TTGAATTTTGTGA-CAATTAATTGGTTGCGTGTAT 753
* * * ** ******* * ** * *** * * ** * ** * * * *
consensus_11541#0 GCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTG 1436
consensus_11541#1 GCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTG 992
consensus_11541#2 GC----ATGCAGGCAGATTGCATTTTACACCGGTC----CTACTGTGGGAGGA------- 798
** ** * * * *** * ** * * ** *** * * *
consensus_11541#0 AGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATC 1496
consensus_11541#1 AGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATC 1052
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 TTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAG 1556
consensus_11541#1 TTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAG 1112
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 AACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTT 1616
consensus_11541#1 AACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTT 1172
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 GTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTC 1676
consensus_11541#1 GTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTC 1232
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 AACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAG 1736
consensus_11541#1 AACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAG 1292
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 GAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGC 1796
consensus_11541#1 GAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGC 1352
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 GTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTG 1856
consensus_11541#1 GTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTG 1412
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 GATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACAT 1916
consensus_11541#1 GATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTACAT 1472
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 GCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACA 1976
consensus_11541#1 GCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTACA 1532
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 CTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGC 2036
consensus_11541#1 CTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCGGC 1592
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 GGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGA 2096
consensus_11541#1 GGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGAGA 1652
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 TCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATGATACCACGACCCA 2156
consensus_11541#1 TCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATGATACCACGACCCA 1712
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 ACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTT 2216
consensus_11541#1 ACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGTTT 1772
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 TAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAA 2276
consensus_11541#1 TAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTCAA 1832
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 AGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACAT 2336
consensus_11541#1 AGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTACAT 1892
consensus_11541#2 ------------------------------------------------------------
consensus_11541#0 TTTAAAATAAAGATATATAGTATGCC 2362
consensus_11541#1 TTTAAAATAAAGAT------------ 1906
consensus_11541#2 --------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||