These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11544#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2014 fasta sequence [CATTTGTTTATATCTCCCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTACGACTCCCACCTCCACCTCCGCCATCCCAATCCGATCTCCCGCGAGCTCCAGATCCACCTCCCGGGTCGCCGCCGAGCTCGCCGCGGCCACCTCCTCGCCGGAATCGGCCGCTCGCGAGCTCCAGCCCGGTGCCCGTTTTCGCGCCATTCGTGCGTGCGAGCTAGCGAGCTAAGCTCCAAGAGCTGCGCCTCCTGCGCTGCGGTGAGGTGCGGCGCTGTGTGAGTCCTCTCGCATTGGGCTTCTGGTTGCTCGGATAGCTTGGGAAGGTGTCACCTTGTTAGTTCCCTCAAATTTCATTGGGCCCTGGTGTAGTAACTTCACATCATAATTACCAGAGTTTGATTACTTTGATGGTGGTAACTTCTAGATGATCTGAACATATGGAGAGGAGATAGAAGTGTCTTGAGTGTTGCAGTAGGACAGCAAGGACATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGTTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCTTATGTTCCTGACACCTGGTACACTGCCCTTTGAGAAATTATGGGAAAAGTTTTTACAGGGTCAGGAGGGAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGTTTGTTGGTCGTGATATTCACAGTGACGCGGTAGTATGGGGAAAGATTTCAATGGTTGATGCAGAGAAGAGACTATTGGCCAATGCACTGGCAGATGTTGATAACCAGTTCTTTGTGTTGCTTTCTGACAGCTGTGTTCCACTGCATACATTTGATTATGTCTATAATTATCTGATGGGAACAAATATCAGCTTCATTGATTGTTTCCGTGATCCTGGCCCTCATGGAAACGGGAGGTATTCTCCTGAGATGCTCCCTGAAATTGAGGAGAAAGACTTCAGGAAGGGTGCCCAGTGGTTTGCAATTACACGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCATCCAAATAAAAAG] [+] EMBL AK065329 [CATTTGTTTATATCTCCCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTACGACTCCCACCTCCACCTCCGCCATCCCAATCCGATCTCCCGCGAGCTCCAGATCCACCTCCCGGGTCGCCGCCGAGCTCGCCGCGGCCACCTCCTCGCCGGAATCGGCCGCTCGCGAGCTCCAGCCCGGTGCCCGTTTTCGCGCCATTCGTGCGTGCGAGCTAGCGAGCTAAGCTCCAAGAGCTGCGCCTCCTGCGCTGCGGTGAGGTGCGGCGCTGTGTGAGTCCTCTCGCATTGGGCTTCTGGTTGCTCGGATAGCTTGGGAAGGTGTCACCTTGTTAGTTCCCTCAAATTTCATTGGGCCCTGGTGTAGTAACTTCACATCATAATTACCAGAGTTTGATTACTTTGATGGTGGTAACTTCTAGATGATCTGAACATATGGAGAGGAGATAGAAGTGTCTTGAGTGTTGCAGTAGGACAGCAAGGACATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGTTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCTTATGTTCCTGACACCTGGTACACTGCCCTTTGAGAAATTATGGGAAAAGTTTTTACAGGGTCAGGAGGGAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGTTTGTTGGTCGTGATATTCACAGTGACGCGGTAGTATGGGGAAAGATTTCAATGGTTGATGCAGAGAAGAGACTATTGGCCAATGCACTGGCAGATGTTGATAACCAGTTCTTTGTGTTGCTTTCTGACAGCTGTGTTCCACTGCATACATTTGATTATGTCTATAATTATCTGATGGGAACAAATATCAGCTTCATTGATTGTTTCCGTGATCCTGGCCCTCATGGAAACGGGAGGTATTCTCCTGAGATGCTCCCTGAAATTGAGGAGAAAGACTTCAGGAAGGGTGCCCAGTGGTTTGCAATTACACGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCATCC ] [+] EMBL CB643787 [ CCTCCGCCACCCTTAAACGATCTCCCGCGAGCTCCAGATCCACCTCCCGGGTCGCCGCCGAGCTCGCCGCGGCCACCTCCTCGCCGGAATCGGCCGCTCGCGAGCTCCATCCCGGAGCCCGTTTTCGCGCCATTCGTGCGTGCGAGCTATCGAGCTAAGCTCCAAGAGCTGCGCCTCCTGCGCTGCGGTGAGGTGCGGCGCTGTGTGAGTCCTCTCGCATTGGGCTTCTGGTTGCTCGGATAGCTTGGGAAGGAGTCACCTTGTTAATTCCCTCAAATTTCATTGGGCCCTGGTGTAGTAACTTCACATCATAATTACCATAGTTTGATTACTTTGATGGGGGTAACTTCTAGATGATCTGAACATATGGAGAGGAGATAGAATTGTCTTGAGTGTTGCAGTAGGACAGCAAGGACATGACTGTCATGCCATCTCTGCGCCACCGGGCTGTCGCCAAGAAGCCCAAATGGATAATCATTCTTGTGTCACTGGTTTGTTTTGTATTGATTGGGGCATATGTTTTCCCACCACGGCGGTATTCGCAATGCTACCTCTTCGGTTCTGGTGCATGCGCAACTTTCAAGGATTGGCTCCCATCTGTAACCCGCAGGGAGCGGACTGATGAGGAGATCATTTCATCTGTAGCTCTTAGGGATATCCTTGCAATGCCCATGCCAGTGTCGAAAAATCCAAAGATCGCTCT ] [-] EMBL CB643788 [ ATTACACGAAGACATGCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCACATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCATCCAAATAAAAAG] [+] EMBL CA999063 [ GCTCTACTGATTCTGGCAGACAGCCTTTACTACAAAAAGTTCAAGTTGTACTGCAAGCCAGCAGACGGACGCAACTGTATTGCAGATGAGCATTACTTACCAACCTTATTCAACATGGTAGATCCTGGTGGAATTGCTAATTGGTCAGTTACACATGTTGATTGGTCTGAGGGAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACC ] [+] EMBL AU225410 [ gccgctAAAATGGCATCCGAGGTCATATAGAGCTGCAGATGTCACCTACGATCTCTTAAAGAATATAACAGCTGTTGATGAAAATTTCCATGTAACAAGTGATGACAAAAAACTTATGACACAGAAGCCATGCTTATGGAATGGATCGAAGAGACCATGCTATCTTTTTGCTAGGAAGTTCTACCCTGAAACTCTTGACAACCTACTGAAGCTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTCTCAAAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTATTTTATTGTGCT ] [-] EMBL CB651413 [ TGCTTATGGAATGGATGGAAGAGACCATGCTATGTTTTTATTAGGAAGTTATACCCTGAAACTGTTGACAGCCTACTGAAGTTATTCACCAGCTATACATCTGTTTGAGCTCCATCAAATTCTTTGTCCTTGGCATATGGTTTCAAAATCCCATGGGCTTTTTTTTGGGTTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGGCTACAAGACTACACAGGCAGATGGTCATCGCAGCAACTGTGACGGCTTGGAGTTGTTAGTCACTGGGAAGGGTTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATATATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTAAGGCCATTATTATATGAT ] [+] EMBL BM418852 [ ccgCCTTGGCATATGGTCTC AAATCCCATGGGCTTTTTTTTGCTGTTTCTGTAAATTGCAAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGC ACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAA GGCTGTGGCGAAATTTGTAGC ATGAC CTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCNTTGATGGTTCTTAGTCC TTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCAaaa ] [+] EMBL OSR3227A [ AAAATCAATACCTAGACTCTTACACATGGATCTGGACCTAGAGACTACAAGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAGTCCATTGACTCCATTCCTGTTGAAGAACAGATAATTTTCCATTTTGTCATACCATTATTATATGATCCATTTTTTATATAGTCAGATAACAAGAGAAGTACCTCA ] [+] EMBL OSR06041A [ AGACTACACACGCAGATCGTCATCGCAGCAACTGTGACGGCTTGGAGTTCTTAGTCACTGGGAAGGGCTGTGGCGAAATTTGTAGCAATGACACTGCCCTCACTGTAATTTATTGTGCTCTCTGTAATTTTTCCATTGATGGTTCTTAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||