These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11545#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1960 fasta sequence [TGCGTACACGCCCAAACAAGTCAGGAATAGTAAAGCCGGAGCAGAAAACGCGGGCAGGAAAAGGAGCTAGTATGTGATGACGAGTTCGTCTTCATCGCTTCCGGTGTCGGCTCATCCGTCCGAGGATGGAACAAGGCGTGCCGTCTGATTTGTGATTGAGGGGTGTTTACATGGAGGCAGCGGCGAAGGTTGGTCGGCTCACACGGAGCAGCCTGCAGGCGGCTTCCTGCCCGGCTGTGAACGGCGGCGTGGTCGTCTTCTTCGCCGCGGTTGTCGCCGGAGCTCTCGTCTCCGCTTCCTGGATGTCTACGGGCGCCAGGGTCACTTCGATCCCTATGATCGCCACCCGGAACATGGCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGAGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACGGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGTGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTACCAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGTTGGCCGGAGCTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGCCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATACGAGCAGGATTGGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCAAAACAGTGCACTCACAGGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATCCTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGCCGGTCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATAGCCGGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGT-CGAG-ACGTGGGAGAAGCGATGACAGGTT-CACGTGA-CCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAGGGAGGAATTTTAATTTTTTTTAGCACATGTAGCTTGAAATGAAAATCCGTTAGTGAAATTACTTGGACCCCACAAAATCATCATCGTTTATACTTTTCATGT] [+] EMBL AK066666 [TGCGTACACGCCCAAACAAGTCAGGAATAGTAAAGCCGGAGCAGAAAACGCGGGCAGGAAAAGGAGCTAGTATGTGATGACGAGTTCGTCTTCATCGCTTCCGGTGTCGGCTCATCCGTCCGAGGATGGAACAAGGCGTGCCGTCTGATTTGTGATTGAGGGGTGTTTACATGGAGGCAGCGGCGAAGGTTGGTCGGCTCACACGGAGCAGCCTGCAGGCGGCTTCCTGCCCGGCTGTGAACGGCGGCGTGGTCGTCTTCTTCGCCGCGGTTGTCGCCGGAGCTCTCGTCTCCGCTTCCTGGATGTCTACGGGCGCCAGGGTCACTTCGATCCCTATGATCGCCACCCGGAACATGGCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGAGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACGGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGTGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTACCAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGTTGGCCGGAGCTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGCCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATACGAGCAGGATTGGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCAAAACAGTGCACTCACAGGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATCCTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGCCGGTCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATAGCCGGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGT CGAG ACGTGGGAGAAGCGATGACAGGTT CACGTGA CCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTC ] [-] EMBL CB624706 [ ATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATCCTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGCCGGTCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATAGCCGGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGT CGAG ACGTGGGAGAAGCGATGACAGGTT CACGTGA CCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAGGGAGGAATTTTAATTTTTTTTAGCACATGTAGCTTGAAATGAAAATCCGTTAGTGAAATTACTT ] [-] EMBL CB624914 [ GAAGTACATCCTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGCCGGTCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATAGCCGGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGT CGAG ACGTGGGAGAAGCGATGACAGGTT CACGTGA CCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAGGGAGGAATTTTAATTTTTTTTAGCACATGTAGCTTGAAATGAAAATCCGTTAGTGAAATTACTTGGACCC ] [+] EMBL AU032857 [ CAGGTCCGAGNCCGTGGGAGAATCGATGACAGGTTCCACGTGACCCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCNCAGATTAATAGCCTCATAGGTTGGGTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAGGGAGGAATTTTAATTTTTTTTAGCACATGTAGCTTGAAATGAAAATCCGTTAGTGAAATTACTTGGAACACACAAAATCATCATCGTTTATACTTTTCATGT] consensusID : consensus_11545#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 836 fasta sequence [AACACGTCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGAGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACGGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGTGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTACCAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGCCGGAGCTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGCCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATACGAGCAGGATTGGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCAAAACAGTGCACTCACAGGTAGAAAAAAGGTTACTACTACTCATGTTTTTCTCTGGTCAGTCCAGAT] [+] EMBL CB624705 [AACACGGCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGAGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACGGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGTGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTACCAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGCCGGAGCTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGCCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATACGAGCAGGATTGGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCAAAACAGTGCACTCACAGGTAGAAAAAAGGTTACTACTACTCATGTTTTTCTCTGGTCAGTCCAGAT] [+] EMBL CB624870 [AACATCTTACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGAGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACGGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGTGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTACCAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGCCGGAGCTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGCCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATACGAGCAGGATTGGAGGAAGGANGTGCGAGACGG ] [+] EMBL CB624913 [AACACTTCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGAGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACGGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGTGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTACCAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGCCGGAGCTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGCCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGA ] consensusID : consensus_11545#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 828 fasta sequence [GAGTACATGATTTCTGTAACAACGGAGCTGCTGGAGCGTGTGTAGGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATCCTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGCCGGTCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATAGCCGGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAGGGAGGAATTTTAATTTTTTTTAGCACATGTAGCTTGAAATGAGGATCCGTTAGTGAAATTACTTGG] [-] EMBL CB624871 [GAGTACATGATTTCTGTAACAACGGAGCTGCTGGAGCGTGTGTAGGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATCCTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGCCGGTCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATAGCCGGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAGGGAGGAATTTTAATTTTTTTTAGCACATGTAGCTTGAAATGAGGATCCGTTAGTGAAATTACTTGG] consensusID : consensus_11545#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 520 fasta sequence [AGCCGGGAACGCGACCAGGTTCATCCCAGAGGATCTAACGATGGGCCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAATTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGNTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAAAAAAAAAAAAAAAACTGAGACTAGTTCTCT] [-] EMBL BE040939 [AGCCGGGAACGCGACCAGGTTCATCCCAGAGGATCTAACGATGGGCCGTGTCTACGACTACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCGCCTTTCAGCTCTGAAGAATTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAGGTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGTAATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGNTTTTGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTCAAAAAAAAAAAAAAAAAAACTGAGACTAGTTCTCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 TGCGTACACGCCCAAACAAGTCAGGAATAGTAAAGCCGGAGCAGAAAACGCGGGCAGGAA 60 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 AAGGAGCTAGTATGTGATGACGAGTTCGTCTTCATCGCTTCCGGTGTCGGCTCATCCGTC 120 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 CGAGGATGGAACAAGGCGTGCCGTCTGATTTGTGATTGAGGGGTGTTTACATGGAGGCAG 180 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 CGGCGAAGGTTGGTCGGCTCACACGGAGCAGCCTGCAGGCGGCTTCCTGCCCGGCTGTGA 240 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 ACGGCGGCGTGGTCGTCTTCTTCGCCGCGGTTGTCGCCGGAGCTCTCGTCTCCGCTTCCT 300 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 GGATGTCTACGGGCGCCAGGGTCACTTCGATCCCTATGATCGCCACCCGGAACATGGCAC 360 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 AGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCTCGCGC 420 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 CCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGCGGCAG 480 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 CGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGAGGCCGT 540 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 GGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACGGCGCCA 600 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 AGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGTGCTTCC 660 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 AGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTACCAGGGCC 720 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 GCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAACGCCGGCG 780 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 ACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGCAGCGAGC 840 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 CCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGTTGGCCGGAGCTTAACATAA 900 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 AGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAACTGGACGG 960 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 GCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGCCGGAATC 1020 consensus_11545#1 ------------------------------------------------------------ consensus_11545#2 ------------------------------------------------------------ consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 TCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATACGAGCAGGATT 1080 consensus_11545#1 -------------------------------------------------------AACAC 5 consensus_11545#2 ----------------GAGTACATGATTTCTGTAACAACGGAGCTGCTGGAGCGTGTGTA 44 consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 GGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCAAAACAGTGCACTCACA 1140 consensus_11545#1 GTCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAATCT 65 consensus_11545#2 GGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATCCTGGCCT 104 consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 GGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATCCTGGCCT 1200 consensus_11545#1 CGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCCGC 125 consensus_11545#2 GCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGA 164 consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 GCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGGGGGCTGA 1260 consensus_11545#1 G-GCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTGA 184 consensus_11545#2 TGCCGTTGCAGCACTACTGGCCCATCCCCG--GCGGCGGCCG-CGGCATGTGCCGGTCGA 221 consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 TGCCGTTGCAGCACTACTGGCCCATCCCCG--GCGGCGGCCG-CGGCATGTGCCGGTCGA 1317 consensus_11545#1 GGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTACG 244 consensus_11545#2 ---TCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGC-----ACAGGAAAT 273 consensus_11545#3 ------------------------------------------------------------ consensus_11545#0 ---TCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGC-----ACAGGAAAT 1369 consensus_11545#1 GCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGGT 304 consensus_11545#2 AGCCGGGAACGCGAC-CAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACT 332 consensus_11545#3 AGCCGGGAACGCGAC-CAGGTTCATCCCAGAGGATCTAACGATGGGCCGTGTCTACGACT 59 consensus_11545#0 AGCCGGGAACGCGAC-CAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACT 1428 consensus_11545#1 GCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTG--CAGCTGC-TCCGCCGCT 361 ***** ** ***** * ** * * * * ** * ** consensus_11545#2 ACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTG 392 consensus_11545#3 ACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTG 119 consensus_11545#0 ACATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTG 1488 consensus_11545#1 ACCAGGGCCGCGTCC---CCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCG 418 ** * * * * * * ** ** ** ** * * * ** * * * * consensus_11545#2 ACAGAGCCGTCGAG-GTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGG 451 consensus_11545#3 ACAGAGCCGTCGAG-GTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGG 178 consensus_11545#0 ACAGAGCCGTCGAG-GTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGG 1547 consensus_11545#1 TCAACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCG----CTGTTCGGC 474 ** **** *** * * * * * * *** **** ** *** * consensus_11545#2 CAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTG 511 consensus_11545#3 CAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTG 238 consensus_11545#0 CAGTTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTG 1607 consensus_11545#1 TACTGCGGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGCCGG 534 * * * ** *** * **** * * * * * *** * * * consensus_11545#2 CCGCCGCCTTTCAGCTCTGAAGAAC-TGGAGACGCTGAGGAGAAGACAGGCG-GATGCGG 569 consensus_11545#3 CCGCCGCCTTTCAGCTCTGAAGAAT-TGGAGACGCTGAGGAGAAGACAGGCG-GATGCGG 296 consensus_11545#0 CCGCCGCCTTTCAGCTCTGAAGAAC-TGGAGACGCTGAGGAGAAGACAGGCG-GATGCGG 1665 consensus_11545#1 AGCTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGG 594 * * *** ** * * ** ** ** *** ** * **** consensus_11545#2 TGAGACAGGTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGT 629 consensus_11545#3 TGAGACAGGTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGT 356 consensus_11545#0 TGAGACAGGTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGT 1725 consensus_11545#1 TGA-ACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCC 653 *** ** ** ** * * * * ** ** ** * ** * * * consensus_11545#2 AATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGG 689 consensus_11545#3 AATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGG 416 consensus_11545#0 AATAAGGATGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGG 1785 consensus_11545#1 GATCG---CCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGG 710 ** * ** * *** **** * * * * * * * * * *** consensus_11545#2 TTG---GGTTTT-GTTCGAATAGCAAAATACAGAA----TTTTGAAAGTAAATACT---A 738 consensus_11545#3 TTG---GGNTTTTGTTCGAATAGCAAAATACAGAA----TTTTGAAAGTAAATACT---A 466 consensus_11545#0 TTG---GGTTTT-GTTCGAATAGCAAAATACAGAA----TTTTGAAAGTAAATACT---A 1834 consensus_11545#1 ATATACGAGCAGGATTGGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCA 770 * * ** ** * * * * * ** * * * * ** * consensus_11545#2 AAATTCGTCATTCATAGTCAAAAGGGAGG--AATTTTAATTTTTTTTAGCACATGTAGCT 796 consensus_11545#3 AAATTCGTCATTCATAGTCAAAAAAAAAA--AAAAAAAAACT-----GAGACTAGTTCTC 519 consensus_11545#0 AAATTCGTCATTCATAGTCAAAAGGGAGG--AATTTTAATTTTTTTTAGCACATGTAGCT 1892 consensus_11545#1 AAACAGTGCACTCACAGGTAGAAAAAAGGTTACTACTACTCATGTTTTTCTCTGGTCAGT 830 *** ** *** ** * ** * * * * ** consensus_11545#2 TGAAATGAGGATCCGTTAGTGAAATTACTTGG---------------------------- 828 consensus_11545#3 T----------------------------------------------------------- 520 consensus_11545#0 TGAAATGAAAATCCGTTAGTGAAATTACTTGGACCCCACAAAATCATCATCGTTTATACT 1952 consensus_11545#1 CCAGAT------------------------------------------------------ 836 consensus_11545#2 -------- consensus_11545#3 -------- consensus_11545#0 TTTCATGT 1960 consensus_11545#1 -------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||