cluster # 11548

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Oryza sativa
cluster # 11548 cluster # 11548 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11548#0 length = 1647 sequences # 9
consensusID : consensus_11548#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1647
fasta sequence
                              [GGAGGAAGCGGCGCCGGAGTGTACGGACGCCATGGGGAGCGAGGCGGCGGCGGGGGA-GTGG--GAGACTGAGGAGGTGGTGGTGGCGTCGGAGGCGGAGTATTCGTGGCCTCAGCTCCGGTTCGACCTCCCGCCCCGCCGCCTCTACCACTTCGCTGGCCAGTTCCGNTCCGCCGCCGNCGCCGCCTCCGCCTCCGCGGGCAACTTCCTCAAGGGCGTGAAGTGGTCGCCTGACGGGTCCTCCTTCCTCACCAGCTGCGACGACAACTCCCTCCGNCTCTTCTACCTNCCGGAGGAAGCGTACAGTACCGAGGCCGAG-AACCTGCTGAGGCCGNTGTTGGAGGTGAAGATTCCTATGGTGCAAGCATCCAAGTGAACGAGGGTGAGCCTGTATATGACTTCTGCTGGTACCCCTACATGTCTGTATCTGATCCTGCTACGTGTGTATTTGCGACGACCAGTCGTGATCATCCAATACACCTCTGGGACGCTACCACTGGGGAGCTTCGGTGTACTTACAGAGCGTATGATGCCATGGACGAGATAACGGCTGCACTTTCTATATCCTTCAATTCTACTGGTACTAAGCTCTTTGCTGGGTACAACAAAGCAATTAGAGTGTTTGATGTTCACCGCCCTGGTAGAGATTTTGAGCAGCATTCTTTGCTTAAAGGATGTGAAGGGCCGACTGGTATAATATCTTCAATTTCATTCTCTCCTCACAACGGGATGCTTGCTGTTGGTTCATACAGCCAGACAACAGCTGTGTATGCGGAGAGTAACATGGAGCCTTTATATGTTTTACATGGCCAGCTTGGTGGTGTCACACAGGTACTCTTTTCAAAAGATGGAAACTATTTGTATACTGGAGGGCGCAAGGATCCATACATACTATGTTGGGATATCCGCAACACTGTGGACATTGTTTACAAGCTGTACAGGTCGTCTGATACTACTAATCAAAGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGCATGGTACAC-ATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTC-TGGAAATTTTCTT-CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA-TTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC-ACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATCGTA-TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTCATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCTTTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTTTGACCCGTTTATAAGAATAGAATTTATCTTGCCTAGCAAAAAAA]

[+] EMBL OSC107041            [GGAGGAAGCGGCGCCGGAGTGTACGGACGCCATGGGGAGCGAGGCGGCGGCGGGGGATGTGGCTGAGACTGAGGAGGTGGTGGTGGCGTCGGAGGCGGAGTATTCGTGGCCTCAGCTCCGGTTCGACCTCCCGCCCCGCCGCCTCTACCACTTCGCTGGCCAGTTCCGNTCCGCCGCCGNCGCCGCCTCCGCCTCCGCGGGCAACTTCCTCAAGGGCGTGAAGTGGTCGCCTGACGGGTCCTCCTTCCTCACCAGCTGCGACGACAACTCCCTCCGNCTCTTCTACCTNCCGGAGGAAGCGTACAGTACCGAGGCCGAG AACCTGCTGAGGCCGNTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK112083             [                                               CGCCGGAGGA GGGG  GAGATGGAGGAGGAGGAAGCGGCGTCGGAGGCGGAGTATTCGTGGCCTCAGCTCCGGTTCGACCTCCCGCCCCGCCGCCTCTACCACTTCGCTGGCCAGTTCCGCTCCGCCGCCGCCGCCGCCTCCGCCTCCGCGGGCAACTTCCTCAAGGGCGTGAAGTGGTCGCCTGACGGGTCCTCCTTCCTCACCAGCTGCGACGACAACTCCCTCCGCCTCTTCTACCTGCCGGAGGAAGCGTACAGTACCGAGGCCGAGCACCCTGCTGAGGCCGCTGTTGGAGGTGAAGATTCCTATGGTGCAAGCATCCAAGTGAACGAGGGTGAGCCTGTATATGACTTCTGCTGGTACCCCTACATGTCTGTATCTGATCCTGCTACGTGTGTATTTGCGACGACCAGTCGTGATCATCCAATACACCTCTGGGACGCTACCACTGGGGAGCTTCGGTGTACTTACAGAGCGTATGATGCCATGGACGAGATAACGGCTGCACTTTCTATATCCTTCAATTCTACTGGTACTAAGCTCTTTGCTGGGTACAACAAAGCAATTAGAGTGTTTGATGTTCACCGCCCTGGTAGAGATTTTGAGCAGCATTCTTTGCTTAAAGGATGTGAAGGGCCGACTGGTATAATATCTTCAATTTCATTCTCTCCTCACAACGGGATGCTTGCTGTTGGTTCATACAGCCAGACAACAGCTGTGTATGCGGAGAGTAACATGGAGCCTTTATATGTTTTACATGGCCAGCTTGGTGGTGTCACACAGGTACTCTTTTCAAAAGATGGAAACTATTTGTATACTGGAGGGCGCAAGGATCCATACATACTATGTTGGGATATCCGCAACACTGTGGACATTGTTTACAAGCTGTACAGGTCGTCTGATACTACTAATCAAAGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGCATGGTACAC ATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTC TGGAAATTTTCTT CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA TTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC ACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATCGTA TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTCATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCTTTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTTTGACCCGTTTATAAGAATAGAATTTAT                 ]
[-] EMBL CB679730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTTTTACATGGCCAGCTTGGTGGTGTCACACA GTACTCTTTTCAAAAGATGGAAACTATTTGTATACTGGAGGGCGCAAGGATCCATACATACTATGTTGGGATATCCGCAACACTGTGGACATTGTTTACAAGCTGTACAGGTCGTCTGATACTACTAATCAAAGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGCATGGTACAC ATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTC TGGAAATTTTCTT CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA TTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC ACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATCGTA TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTCATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCTTTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTATGGCCCGTTTATAAGAATAGAATTTATCTTGCCTA         ]
[-] EMBL CB651474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATACTATGTTGGGATATCCGCAACACTGTGGACATTGTTTACAAGCTGTACAGGTCGTCTGATACTACTAATCAAAGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGCATGGTACAC ATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTC TGGAAATTTTCTT CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA TTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC ACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATCGTA TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTCATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCTTTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTTTGACCCGTTTATAAGAATAGAATTT                   ]
[-] EMBL CA762324             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGGTCGTCTGATACTACTAATCAAAGGATACATTNTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGCATGGTACAC ATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATTTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTC TGGAAATTTTCTT CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA TTTTGGATTATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC ACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATTGTA TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTTATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCTTTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTTTGACCCGTTTAAAAAAAAAAAAaaaa                  ]
[-] EMBL CA763580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATATTANTAATCAAAGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGCATGGTACAC ATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTC TGGAAATTTTCTT CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA TTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC ACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATCGTA TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTCATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCTTTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTTTGACCCGTTTATAAGAAAAAAAaaa                   ]
[-] EMBL CA763581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGATCCATTTTGATATGCAGCC TGTGGCAGGGATCCTGTCACCGGCGGGCAGGATGGCATGGTACCCGATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATCCCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCCGCTCGGTC TGGAAATTTTCTT CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA TTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC ACTTGAGGCAGTACATCAAGCCATGACTACAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATTGTA TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTTATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCTTTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTTTGACCCGTTTATAAGAATAGAATTTATCTTGCCTAGCAAAAAAA]
[-] EMBL CB679729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCAGAATGGCATGGTACAC ATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGATGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTC TGGAAATTTTTTT CCTTGCAAGAAGCTTGAAAGTTGAAACTACATCAAGGCCTGGATAAGCGAAAA TTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGTGATACCAAC ACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGTTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGTTGCTCCAACTGTTGCACATCGTA TTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTCATCGACAGNTACAATTTGTCC                                                                                                                   ]
[+] EMBL AA752493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cGAGGAGAACTGCTGCTCSGTCTTGGAAATTTTCTTYCYTTGCAAGRAGCTTGAAAGTTGAAACTACATCAAGGCCTKGATAAGCGAAAATTTTTGGRTYATAGATGTTGAAATTGTTGCAATCAGTTTGCAGATGGKGATACCAACMCCTTGRGGCGGTACATCAAGCCMTGACTATAAAAGCAGTCACCAAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGGGTGCYCCAACTGTYGCACATCGTAGTTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGCATAATGTATTCATCGACAGCTACAA                                                                                                                          ]




>consensus_11548#0
GGAGGAAGCGGCGCCGGAGTGTACGGACGCCATGGGGAGCGAGGCGGCGGCGGGGGAGTG
GGAGACTGAGGAGGTGGTGGTGGCGTCGGAGGCGGAGTATTCGTGGCCTCAGCTCCGGTT
CGACCTCCCGCCCCGCCGCCTCTACCACTTCGCTGGCCAGTTCCGNTCCGCCGCCGNCGC
CGCCTCCGCCTCCGCGGGCAACTTCCTCAAGGGCGTGAAGTGGTCGCCTGACGGGTCCTC
CTTCCTCACCAGCTGCGACGACAACTCCCTCCGNCTCTTCTACCTNCCGGAGGAAGCGTA
CAGTACCGAGGCCGAGAACCTGCTGAGGCCGNTGTTGGAGGTGAAGATTCCTATGGTGCA
AGCATCCAAGTGAACGAGGGTGAGCCTGTATATGACTTCTGCTGGTACCCCTACATGTCT
GTATCTGATCCTGCTACGTGTGTATTTGCGACGACCAGTCGTGATCATCCAATACACCTC
TGGGACGCTACCACTGGGGAGCTTCGGTGTACTTACAGAGCGTATGATGCCATGGACGAG
ATAACGGCTGCACTTTCTATATCCTTCAATTCTACTGGTACTAAGCTCTTTGCTGGGTAC
AACAAAGCAATTAGAGTGTTTGATGTTCACCGCCCTGGTAGAGATTTTGAGCAGCATTCT
TTGCTTAAAGGATGTGAAGGGCCGACTGGTATAATATCTTCAATTTCATTCTCTCCTCAC
AACGGGATGCTTGCTGTTGGTTCATACAGCCAGACAACAGCTGTGTATGCGGAGAGTAAC
ATGGAGCCTTTATATGTTTTACATGGCCAGCTTGGTGGTGTCACACAGGTACTCTTTTCA
AAAGATGGAAACTATTTGTATACTGGAGGGCGCAAGGATCCATACATACTATGTTGGGAT
ATCCGCAACACTGTGGACATTGTTTACAAGCTGTACAGGTCGTCTGATACTACTAATCAA
AGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGC
ATGGTACACATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCT
GATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGG
CACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAG
AACTGCTGCTCGGTCTGGAAATTTTCTTCCTTGCAAGAAGCTTGAAAGTTGAAACTACAT
CAAGGCCTGGATAAGCGAAAATTTTGGATCATAGATGTTGAAATTGTTGCAATCAGTTTG
CAGATGGTGATACCAACACTTGAGGCAGTACATCAAGCCATGACTATAAAAGCAGTCACC
AAAGATCACCCTGTGCCAAGGAGAAGCTAGTGTCGTGTGCATGGTTTCATTGTCAAATGG
TTGCTCCAACTGTTGCACATCGTATTGGTAACAACTGATGTAGGCTGAAGCTAGTAAAGC
ATAATGTATTCATCGACAGCTACAATTTGTCCCCTTTTGTACTGATCCAACTCAAATGCT
TTAACAATGTCGGATGACATGGAATGATGGCAAAGATGCACTTTGACCCGTTTATAAGAA
TAGAATTTATCTTGCCTAGCAAAAAAA
clustalw multiple alignements is not computed in this case