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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11560#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1499 fasta sequence
[AGCGCGTGGCGGCCGTAGGCGAGCGCAGCGTGCGGCAGCATCGCCCTTCGCGGCGAGGCGGCGGGGGCGCAACCGGTGAGGGGACCTACGTTGCTGCCGCAATCCGCCGCTTGCCTTCGCCGCCGCCCGCGCTGAATCCGAGCCGGAGCGCGCGTCGGTTGCCGTCACATCGACCCCACCGGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCGCGCGCACAGGTGAGATGAAGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGACTCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGGCTTCGTACGTGTACCCGTCTGCTGCGATGTGAGGATCAGTCATCACCTTCTGTTCACCATCCATCGGAGCAAAAGTTCTGGCGGCACATATATTGCAAGAAGGTTTTCATTGGGTTCCCTATGGCCATTGCAGGTAAACCATATCTTGCATGATGGGGATGCAGTCTCCATCAGCTTGAGGGCTATCTTGGAATTTGGTTCTTTCATTTCCCTACAGGTTATAATATCATAAGGAAAAACGCTACATTAGGCAGATGTGGTCCATACTCTGAGTAGTGTTGGTCTGCGGCTGCTCCCATGACAAGCCTGGTGATGCCATGAAGGAGCATATTCATCTAGGTTCTTCTCGGCCTCTTCCTTCGCCAACATCAGGTACTCGCTGATCTCTTCAGGCTTCATTCTGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGTGGACAGGTTCTGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACGAACACCTTGTCCTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCAAGCGCTCCACATCGCGTCGTACTCTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAACCAGAAGCCAAAGTCGACGCTGTGACTTTACACAACGGTGGGACGAGATGCCATTTGCGCTCGCGTTGGCGTGATCAAGCAAGCAAACGTAGCTCATACGCGCGTATGTCGCTAAAGGGAGATGTATTGTATACTACTGTATGCAGGGACGATGTTTGCCGCGTGGACCCAAGCTGAGTAACTTGGAAATTACCGAGCATTCGACGTGGACGTGACAAGTTGATGCAGTTTATAGTTTAAGACCAGCGTCAAGCAATGAAGCGAGCACGCAACACAAGTACAACGAACAGTTCTGCTTGGGCCTATATAAAAAAGTTT]
[+] EMBL CB640996 [AGCGCGTGGCGGCCGTAGGCGAGCGCAGCGTGCGGCAGCATCGCCCTTCGCGGCGAGGCGGCGGGGGCGCAACCGGTGAGGGGACCTACGTTGCTGCCGCAATCCGCCGCTTGCCTTCGCCGCCGCCCGCGCTGAATCCGAGCCGGAGCGCGCGTCGGTTGCCGTCACATCGACCCCACCGGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCGCGCGCACAGGTGAGATGAAGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGACTCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGGCTTCGTACGTGTACCCGTCTGCTGCGATGTGAGGATCAGTCATCACCTTCTGTTCACCATCCATCGGAGCAA ]
[+] EMBL AK066338 [ GCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGACTCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGGCTTCGTACGTGTACCCGTCTGCTGCGATTTGAGGATCAGTCATCACCTCCTGTTCACCATCCATCGGAGCAAAAGTTCTGGCGGCACATATATTGCAAGAAGGTTTTCATTGGGTTCCCTATGGCCATTGCAGGTAAACCATATCTTGCATGATGGGGATGCAGTCTCCATCAGCTTGAGGGCTATCTTGGAATTTGGTTCTTTCATTTCCCTACAGGTTATAATATCATAAGGAAAAACGCTACATTAGGCAGATGTGGTCCATACTCTGAGTAGTGTTGGTCTGCGGCTGCTCCCATGACAAGCCTGGTGATGCCATGAAGGAGCATATTCATCTAGGTTCTTCTCGGCCTCTTCCTTCGCCAACATCAGGTACTCGCTGATCTCTTCAGGCTTCATTCTGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGTGGACAGGTTCTGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACGAACACCTTGTCCTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCAAGCGCTCCACATCGCGTCGTACTCTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAACCAGAAGCCAAAGTCGACGCTGTGACTTTACACAACGGTGGGACGAGATGCCATTTGCGCTCGCGTTGGCGTGATCAAGCAAGCAAACGTAGCTCATACGCGCGTATGTCGCTAAAGGGAGATGTATTGTATACTACTGTATGCAGGGACGATGTTTGCCGCGTGGACCCAAGCTGAGTAACTTGGAAATTACCGAGCATTCGACGTGGACGTGACAAGTTGATGCAGTTTATAGTTTAAGACCAGCGTCAAGCAATGAAGCGAGCACGCAACACAAGTACAACGAACAGTTCTGCTTGGGCCTATATAAAAAAGTTT]
consensusID : consensus_11560#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1031 fasta sequence
[GGCCCATGAGAATTGGCGAGCCCACCGGACTAACCAACCGAGCTGCCTTTCCGGCTCGACTCTGCCGGTGAGAGCGGTAGCGCGTGGCGGCCGTAGGCGAGCGCAGCGTGCGGCAGCATCGCCCTTCGCGGCGAGGCGGCGGGGGCGCAACCGGTGAGGGGACCTACGTTGCTGCCGCAATCCGCCGCTTGCCTTCGCCGCCGCCCGCGCTGAATCCGAGCCGGAGCGCGCGTCGGTTGCCGTCACATCGACCCCACCCGGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCGCGCGCACAGGTGAGATGAAGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGACTCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGGCTTCATACGTGTACCCGTCTGCTGCGATGTGAGGATCAGTCATCACCTCCTGTTCACCATCCATCGGAGCAAAAGTTCTGGCGGCACATATATTGCAAGAAGGTTTTCATTGGGTTCCCTGTAAGTGCACACAACTAATGGATTTTAGTCATTTTCCTGGTTTCTTGGTAAGAGTGCAATACACTGGTATCCTAGTTCAATTCGTTGACAGAAGTAAAGATACTCAAATGTAGCATTATGTGTCCTACAATTCTCCGCATGCTGTACGAAGTACTATTATGCATGAGATGCACTAAGCTCTATGAAGTTCAAAAAGTCAGGTAGCAAATGACCATTCACTTGACTTTACCTTGTGCATATCAGATGGCCATTGCAGGTAAACCATATCTTGCATGATGGGGATGCAGTCTCCATCAGCTTGAGGGCTATCTTGGAATTTGGTTCTTTCATTTCCCTACAGGTTATAATATCATAAGGTTTGTGCACATATATTTAGTATGGATTCATCTCATAAAATGTTCTATCTATTCCT]
[+] EMBL CB618878 [GGCCCATGAGAATTGGCGAGCCCACCGGACTAACCAACCGAGCTGCCTTTCCGGCTCGACTCTGCCGGTGAGAGCGGTAGCGCGTGGCGGCCGTAGGCGAGCGCAGCGTGCGGCAGCATCGCCCTTCGCGGCGAGGCGGCGGGGGCGCAACCGGTGAGGGGACCTACGTTGCTGCCGCAATCCGCCGCTTGCCTTCGCCGCCGCCCGCGCTGAATCCGAGCCGGAGCGCGCGTCGGTTGCCGTCACATCGACCCCACCCGGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCGCGCGCACAGGTGAGATGAAGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGACTCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGGCTTCATACGTGTACCCGTCTGCTGCGATGTGAGGATCAGTCATCACCTCCTGTTCACCATCCATCGGAGCAAAAGTTCTGGCGGCACATATATTGCAAGAAGGTTTTCATTGGGTTCCCTGTAAGTGCACACAACTAATGGATTTTAGTCATTTTCCTGGTTTCTTGGTAAGAGTGCAATACACTGGTATCCTAGTTCAATTCCTTGACAGAAGTAAAGATACTCCAATGTAGCATTA ]
[+] EMBL CB630843 [ TGCCTTTCCGGCTCGACTCTGCCGGTGAGAGCGGTAGCGCGTGGCGGCCGTAGGCGAGCGCAGCGTGCGGCAGCATCGCCCTTCGCGGCGAGGCGGCGGGGGCGCAACCGGTGAGGGGACCTACGTTGCTGCCGCAATCCGCCGCTTGCCTTCGCCGCCGCCCGCGCTGAATCCGAGCCGGAGCGCGCGTCGGTTGCCGTCACATCGACCCCACCCGGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCGCGCGCACAGGTGAGATGAAGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGACTCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGGCTTCATACGTGTACCCGTCTGCTGCGATGTGAGGATCAGTCATCACCTCCTGTTCACCATCCATCGGAGCAAAAGTTCTGGCGGCACATATATTGCAAGAAGGTTTTCATTGGGTTCCCTGTAAGTGCACACAACTAATGGATTTTAGTCATTTTCCTGGTTTCTTGGTAAGAGTGCAATACACTGGTATCCTAGTTCAATTCGTTGACAGAAGTAAAGATACTCAAATGTAGCATTATGTGTCCTACAATTCTCCGCATGCTGTACGAAGTACTATTATGCATGAGATGCACTAAGCTCTATGAAGTTCAAAAAGTCAGGTAGCAAATGACCATTCACT ]
[+] EMBL CB654755 [ AGCGCGCGTCGGTTGCCGTCACATCGACCCCA CCGGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCGCGCGCACAGGTGAGATGAAGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGACTCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGGCTTCGTACGTGTACCCGTCTGCTGCGATGTGAGGATCAGTCATCACCTCCTGTTCACCATCCATCGGAGCAAAAGTTCTGGCGGCACATATATTGCAAGAAGGTTTTCATTGGGTTCCCTGTAAGTGCACACAACTAATGGATTTTAGTCATTTTCCTGGTTTCTTGGTAAGAGTGCAATACACTGGTATCCTAGTTCAATTCGTTGACAGAAGTAAAGATACTCAAATGTAGCATTATGTGTCCTACAATTCTCCGCATGCTGTACGAAGTACTATTATGCATGAGATGCACTAAGCTCTATGAAGTTCAAAAAGTCAGGTAGCAAATGACCATTCACTTGACTTTACCTTGTGCATATCAGATGGCCATTGCAGGTAAACCATATCTTGCATGATGGGGATGCAGTCTCCATCAGCTTGAGGGCTATCTTGGAATTTGGTTCTTTCATTTCCCTACAGGTTATAATATCATAAGGTTTGTGCACATATATTTAGTATGGATTCATCTCATAAAATGTTCTATCTATTCCT]
consensusID : consensus_11560#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 768 fasta sequence
[ATTAATTTGCTGACGCTGATAGCCTAGTCCTGATAAATCTTCAGAGCTTCAAGTACTAAGTTATCCACATAGTCCGATACACCGTCTTAAGTACCAGAGCCTCCAGTTCCAGGAATAAATTTCTCTCTCTATCTCTCTCCCCTTTTTTTTTATTTGCGATGAGAAATAGTAAAATTTTCTTGAAAACATTACAGGAAAAACGCTACATTAGGCAGATGTGGTCCATACTCTGAGTAGTGTTGGTCTGCGGCTGCTCCCATGACAAGCCTGGTGATGCCATGAAGGAGCATATTCATTTAGGTTCTTCTCGGCCTCTTCCTTCGCCAACATCAGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGTGGACAGGTTTTGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACGAACACCTTGTCCTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTTTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAGTCAGCCCCGAATATATTTTTCATTTCATGCATTGACTCAAAAGGTTAATAACGCAAAGTTGTTTTTTTCTTTGAAAC]
[-] EMBL CB654756 [ATTAATTTGCTGACGCTGATAGCCTAGTCCTGATAAATCTTCAGAGCTTCAAGTACTAAGTTATCCACATAGTCCGATACACCGTCTTAAGTACCAGAGCCTCCAGTTCCAGGAATAAATTTCTCTCTCTATCTCTCTCCCCTTTTTTTTTATTTGCGATGAGAAATAGTAAAATTTTCTTGAAAACATTACAGGAAAAACGCTACATTAGGCAGATGTGGTCCATACTCTGAGTAGTGTTGGTCTGCGGCTGCTCCCATGACAAGCCTGGTGATGCCATGAAGGAGCATATTCATTTAGGTTCTTCTCGGCCTCTTCCTTCGCCAACATCAGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGTGGACAGGTTTTGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACGAACACCTTGTCCTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTTTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAGTCAGCCCCGAATATATTTTTCATTTCATGCATTGACTCAAAAGGTTAATAACGCAAAGTTGTTTTTTTCTTTGAAAC]
consensusID : consensus_11560#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 718 fasta sequence
[TCGTCCCCACGTTACTTGATGCAAGTAATTTTTTTCACAAGCACTAACAAAAAAAGTAATGAGACAATTTTACCTTCATATCTTTTCCTGTGCTTTTCGCTATCAGAGCATATTCATCTAGGTTCTTCTCGGCCTCTTCCTTCGCCAACATCAGGTACTCGCTGATCTCTTCAGGCTTCATTCTGGTACAGTGAACTTTTGTTCCCATCGAGAAATGTAAACTGAATTGCACCAGGTGATTGTAGCTGTCAAAGCAGGAGAAGCAAGATGCTTACCTTTACTGAGAGTTTGTGCAGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGTGGCCAGGTTCTGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACGAACACCTTGTCCTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTCTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAGTCAGCCCCGAATATATTTTTCATTTCATGCATTGACTCACAAAGTTAATAACGCAAAGTTGTTT]
[-] EMBL CB630844 [TCGTCCCCACGTTACTTGATGCAAGTAATTTTTTTCACAAGCACTAACAAAAAAAGTAATGAGACAATTTTACCTTCATATCTTTTCCTGTGCTTTTCGCTATCAGAGCATATTCATCTAGGTTCTTCTCGGCCTCTTCCTTCGCCAACATCAGGTACTCGCTGATCTCTTCAGGCTTCATTCTGGTACAGTGAACTTTTGTTCCCATCGAGAAATGTAAACTGAATTGCACCAGGTGATTGTAGCTGTCAAAGCAGGAGAAGCAAGATGCTTACCTTTACTGAGAGTTTGTGCAGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGTGGCCAGGTTCTGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACGAACACCTTGTCCTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTCTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAGTCAGCCCCGAATATATTTTTCATTTCATGCATTGACTCACAAAGTTAATAACGCAAAGTTGTTT]
[-] EMBL CB618879 [ TTCACAAGCACTAACAAAAAAAGTAATGAGACAATTTTCCCTTCATATCTTTTCCTGTGCTTTTCGCTATCAGAGCATATTCATCTAGGTTCTTTTCGGCCTCTTCCTTCGCCAACATCAGGTACTCGCTGATCTCTTCAGGCTTCATTTTGGTACAGTGAACTTTTGTTCCCATCGAGAAATGTAAACTGAATTGCACCAGGTGATTGTAGCTGTCAAAGCAGGAGAAGCAAGATGCTTACCTTTACTGAGAGTTTGTGCAGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGTGGCCAGGTTTTGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACGAACACCTTGTCCTCGCCGGCGGCCAGGCTTTGCTTGTCCCACTGGTCGCCGGCGTCCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTTTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAGTCAGCCCCGAATATATTTTTCATTTCATGCATTGACTCACAAAGTTAATAACGCAAAGTTGTTT]
consensusID : consensus_11560#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[TCNNNCGCAANAAAGAGGNATTNCTTNTTTCCGGTTNGTAGNAATNNTAGTTTTGCTTCCTTNCAAATNNGATTGGAATTTTAGGTNNTTGGACAGGAATTNTCCNTTGGGAANNAANGGATCACCAGGGTTTAGTTTCAAGCNGGGGACAAGAGTTACCTTANGGNGATTGTGCAGGGGTNGGAAATGACAANAACAANATGGGCCCGTTCCGTGGACAGGTTCGGCAGCGCCCAAAGGATGTGCTCTTGCCGTGCTCGAAGTCTTCGTCGACGGCCACGGAACACCTTGTCTTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTCTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAGTCAGCACCGAATATATTTTTCATTTCATGCATTGACTCACAAAGTTAATAACGCAAAGTTGTTT]
[-] EMBL BE229092 [TCNNNCGCAANAAAGAGGNATTNCTTNTTTCCGGTTNGTAGNAATNNTAGTTTTGCTTCCTTNCAAATNNGATTGGAATTTTAGGTNNTTGGACAGGAATTNTCCNTTGGGAANNAANGGATCACCAGGGTTTAGTTTCAAGCNGGGGACAAGAGTTACCTTANGGNGATTGTGCAGGGGTNGGAAATGACAANAACAANATGGGCCCGTTCCGTGGACAGGTTCGGCAGCGCCCAAAGGATGTGCTCTTGCCGTGCTCGAAGTCTTCGTCGACGGCCACGGAACACCTTGTCTTCGCCGGCGGCCAGGCTCTGCTCGTCCCACTGGTCGCCGGCGTCTGCAGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTCTTCGCCGTCGCTATCCATTGCTGCTTCCTGACGTTGAGAAATGAGAAGCACAAGACCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATGAATGGAAATTTCGAGATCAAGTTACAGAAGAAAGCAGAAGTAGTCAGCACCGAATATATTTTTCATTTCATGCATTGACTCACAAAGTTAATAACGCAAAGTTGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 AGCGCGTGGCGGCCGTAGGCGAGCGCAGCGTGCGGCAGCATCGCCCTTCGCGGCGAGGCG 60
consensus_11560#1 ------------------------------------------------------------
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 GCGGGGGCGCAACCGGTGAGGGGACCTACGTTGCTGCCGCAATCCGCCGCTTGCCTTCGC 120
consensus_11560#1 ------------------------------------------------------------
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 CGCCGCCCGCGCTGAATCCGAGCCGGAGCGCGCGTCGGTTGCCGTCACATCGACCCCACC 180
consensus_11560#1 ------------------------------------------------------------
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 GGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCGCGCGCACAGGTGAGATGA 240
consensus_11560#1 ------------------------------------------------------------
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 AGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGATGTCATCTCCTGTGCTGTC 300
consensus_11560#1 -----------------------------------------------------------G 1
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 GCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGAGCTCGCGGTTTTCGAGAC 360
consensus_11560#1 GCCCATGAGAATTGGCGAGCCCACCGGACTAACCAACCGAGCTGCCTTTCCGGCTCGACT 61
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 TCAGGTTCGTCATCGGCGACCTGGCGTTGCCGCCGTCGAGCCAGTTTCTGATGGCATTGG 420
consensus_11560#1 CTGCCGGTGAGAGCGGTAGCGCGTGGCGGCCGTAGGCGAGCGCAGCGTGCGGCAGCATCG 121
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 --------------------ATTAATTTGCTGACGCTGATAGCCTAGTCCTGATAAATCT 40
consensus_11560#0 CTTCGTACGTGTACCCGTCTGCTGCGATGTGAGGATCAGTCATCACCTTCTGTTCACCAT 480
consensus_11560#1 CCCTTCGCGGCGAGGCGGCGGGGGCGCAACCGGTGAGGGGACCTACGTTGCTGCCGCAAT 181
consensus_11560#3 -------------TCGTCCCCACGT-TACTTGATGCAAGTAA---TTTTTTTCACAAGCA 43
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 TCAGAGCTTCAAGTACTAAGTTATC-CACATAGTCCGATACA---CCGTCTTAAGTACCA 96
consensus_11560#0 CCATCGGAGCAAAAGTTCTGGCGGCACATATATTGCAAGAAGG--TTTTCATTGGGTTCC 538
consensus_11560#1 CCGCCGCTTGCCTTCGCCGCCGCCCGCGCTGAATCCGAGCCGGAGCGCGCGTCGGTTGCC 241
consensus_11560#3 CTAACAAAAAAAGTAATGAGACAATTTTACCTTCATATCTTTTCCTGTGCTTTTCGCTAT 103
consensus_11560#4 -------------------------------------------------------TCNNN 5
consensus_11560#2 GAGCCTCCAGTTCCAGGAATAAATTTCTCTCTCTATCTCTCTCCCCTTTTTTTTTATTTG 156
consensus_11560#0 CTATGGCCATTGCAGGTAAACCATATCTTGCATGATGGGGATGCAGTCTCCATCAGCTTG 598
consensus_11560#1 GTCACATCGACCCCACCCGGCCCGGCGCGGCGCCAGCACTCGCCGCCCCTCCGCCGTCCG 301
consensus_11560#3 CAGAGCATATTCATCTAGGTTCTTC--------TCGGCCTCTTCCTTC------------ 143
consensus_11560#4 CGCAANAAAGAGGNATTNCTTNTTT--------CCGGTTNGTAGNAAT------------ 45
consensus_11560#2 CGATGAGAAATAGTA-AAATTTTCT--------TGAAAACATTACAGG------------ 195
consensus_11560#0 AGGGCTATCTTGGAATTTGGTTCTT--------TCATTTCCCTACAGGTTATAATATCAT 650
consensus_11560#1 CGCGCACAGGTGAGATGAAGCATCTAGATGAGCTGAGTCCGCATCGAGGAATAGGTTGAT 361
consensus_11560#3 ------GCCAACATCAGGTACTCGCTGATCTCTTCAGGCTT--CATTCTGGTA--CAGTG 193
consensus_11560#4 ------NNTAGTTTTGCTTCCTTNCAAATNNGATTGGA------ATTTTAGGT--NNTTG 91
consensus_11560#2 ------AAAAACGCTACAT-TAGGCAGATGTGGTCCAT------ACTCTGAGTAGTGTTG 242
consensus_11560#0 AAGG--AAAAACGCTACAT-TAGGCAGATGTGGTCCAT------ACTCTGAGTAGTGTTG 701
consensus_11560#1 GTCATCTCCTGTGCTGTCGCCACTCGAGGATAGCCGAGCGGAGCACTCTGTTCGGCGTGA 421
* * * *
consensus_11560#3 AACTTTTGTTCCCATCGAGAAATGTAAACTGAATTGCACCAGGTGATTGTAGCTGTCAAA 253
consensus_11560#4 GACAGGAATTNTCCNTTGGGAANNAAN---GGAT--CACCAGGGTTTAGT-----TTCAA 141
consensus_11560#2 GTCTGCGGCTGCTCCCATGACAAGCCT----GGTGATGCCATGAAGGAGCA--TATTCAT 296
consensus_11560#0 GTCTGCGGCTGCTCCCATGACAAGCCT----GGTGATGCCATGAAGGAGCA--TATTCAT 755
consensus_11560#1 GCTCGCGGTTTTCGAGACTCAGGTTCGTC--ATCGGCGACCTGGCGTTGCCGCCGTCGAG 479
* * * * * *
consensus_11560#3 GCAGGAGAAGCAAGATGCTTACCTTTACTG-------------------------AGAGT 288
consensus_11560#4 GCNGGGGA--CAAGAG--TTACCTTAN----------------------------GGNGA 169
consensus_11560#2 TTAGGTTCTTCTCGGCCTCTTCCTTCGC---------------------------CAACA 329
consensus_11560#0 CTAGGTTCTTCTCGGCCTCTTCCTTCGCCAACATCAGGTACTCGCTGATCTCTTCAGGCT 815
consensus_11560#1 CCAGTTTC--TGATGGCATTGGCTTCATACGTG----------------------TACCC 515
* * ***
consensus_11560#3 TTGTGCAGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGT--GGCCAGGTTC 346
consensus_11560#4 TTGTGCAGGGGTN-GGAAATGA-CAANAACAANATGGGCCCGTTCCGT--GGACAGGTTC 225
consensus_11560#2 T----CAGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGT--GGACAGGTTT 383
consensus_11560#0 TCATTCTGGGCTGTGGACATGAGCAACTACAATATTGGCCCCGTCCGT--GGACAGGTTC 873
consensus_11560#1 GTCTGCTGCGATGTGAGGATCAGTCATCACCTCCTGTTCACCATCCATCGGAGCAAAAGT 575
* * * * * ** * * ** * * * *** * * **
consensus_11560#3 TGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACG-AA 405
consensus_11560#4 GGCAGCGCCCAAAGGA-TGTGCTCTTGCCGTGCTCGAAGTCTTCGTCGACGGCCACGGAA 284
consensus_11560#2 TGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACG-AA 442
consensus_11560#0 TGCAGCGCCCAAAGGAATGTGCTCTTGCCGTGCTCGACGTCCTCGTCGACGGCCACG-AA 932
consensus_11560#1 TCTGGCGGCACATATATTGCAAGAAGGTTTTCATTGGGTTCCCTGTAAGTGCACACA-AC 634
*** * * * ** * * * * ** ** * *** *
consensus_11560#3 CACCTTGTCCTCGCCGGCGGCCAGGCTC--TGCTCGTCCCACTGGTCGCCGGCGTCCTGC 463
consensus_11560#4 CACCTTGTCTTCGCCGGCGGCCAGGCTC--TGCTCGTCCCACTGGTCGCCGGCGTC-TGC 341
consensus_11560#2 CACCTTGTCCTCGCCGGCGGCCAGGCTC--TGCTCGTCCCACTGGTCGCCGGCGTCCTGC 500
consensus_11560#0 CACCTTGTCCTCGCCGGCGGCCAGGCTC--TGCTCGTCCCACTGGTCGCCGGCGTCCTGC 990
consensus_11560#1 TAATGGATTTTAGTCATTTTCCTGGTTTCTTGGTAAGAGTGCAATACACTGGTATCCTAG 694
* * * * * ** ** * ** * * * * ** ** *
consensus_11560#3 AGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTCTTCG 523
consensus_11560#4 AGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTCTTCG 401
consensus_11560#2 AGAGAGCCGGCCGACGAGCTGACGCTGCACCGAGCGCTCCACATCGCGTCGTACTTTTCG 560
consensus_11560#0 AGAGAGCCGGCCGACGAGCTGACGCTGCACCAAGCGCTCCACATCGCGTCGTACTCTTCG 1050
consensus_11560#1 TTCAATTCGTTGACAGAAGTAAAGATAC-TCAAATGTAGCATTATGTGTCCTACAATTCT 753
* ** ** * * * * * * * * ** * *** *** ***
consensus_11560#3 CCGT-CGCTATCC--ATTGCTGCTT--CCTGA----CGTTGAGAAATGAGAAGCACAAGA 574
consensus_11560#4 CCGT-CGCTATCC--ATTGCTGCTT--CCTGA----CGTTGAGAAATGAGAAGCACAAGA 452
consensus_11560#2 CCGT-CGCTATCC--ATTGCTGCTT--CCTGA----CGTTGAGAAATGAGAAGCACAAGA 611
consensus_11560#0 CCGT-CGCTATCC--ATTGCTGCTT--CCTGA----CGTTGAGAAATGAGAAGCACAAGA 1101
consensus_11560#1 CCGCATGCTGTACGAAGTACTATTATGCATGAGATGCACTAAGCTCTATGAAGTTCAAAA 813
*** *** * * * * ** * * *** * * ** * **** *** *
consensus_11560#3 --CCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATG---------AATGGAAATTTC 623
consensus_11560#4 --CCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATG---------AATGGAAATTTC 501
consensus_11560#2 --CCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATG---------AATGGAAATTTC 660
consensus_11560#0 --CCATGCAGCTGCAGAGTAACTGCCCAGCCGTTTCATG---------AATGGAAATTTC 1150
consensus_11560#1 AGTCAGGTAGCAAATGACCATTCACTTGACTTTACCTTGTGCATATCAGATGGCCATTGC 873
** * *** ** * * * * * ** **** *** *
consensus_11560#3 GAG---ATCAAGT--TACAGAA---GAAAGCAGAAGTAGTCAGCCCCGAATATAT---TT 672
consensus_11560#4 GAG---ATCAAGT--TACAGAA---GAAAGCAGAAGTAGTCAGCACCGAATATAT---TT 550
consensus_11560#2 GAG---ATCAAGT--TACAGAA---GAAAGCAGAAGTAGTCAGCCCCGAATATAT---TT 709
consensus_11560#0 GAG---ATCAAGT--TACAGAA---GAAAGCAGAAGTAACCAGAAGCCAAAGTCGACGCT 1202
consensus_11560#1 AGGTAAACCATATCTTGCATGATGGGGATGCAGTCTCCATCAGCTTGAGGGCTATC--TT 931
* * ** * * ** * * * **** *** * *
consensus_11560#3 TTCATTTCATGCATTGACT---CACAAAGTTA--ATAACGCAAA-GTTGTTT-------- 718
consensus_11560#4 TTCATTTCATGCATTGACT---CACAAAGTTA--ATAACGCAAA-GTTGTTT-------- 596
consensus_11560#2 TTCATTTCATGCATTGACT---CAAAAGGTTA--ATAACGCAAA-GTTGTTTTTTTCTTT 763
consensus_11560#0 GTGACTTTACACAACGGTGGGACGAGATGCCA--TTTGCGCTCGCGTTGGCGTGATCAAG 1260
consensus_11560#1 GGAATTTGGTTCTTTCATTTCCCTACAGGTTATAATATCATAAGGTTTGTGCACATATAT 991
* ** * * * * * * * ***
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 GAAAC------------------------------------------------------- 768
consensus_11560#0 CAAGCAAACGTAGCTCATACGCGCGTATGTCGCTAAAGGGAGATGTATTGTATACTACTG 1320
consensus_11560#1 TTAGTATGGATTCATCTCATAAAATGTTCTATCTATTCCT-------------------- 1031
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 TATGCAGGGACGATGTTTGCCGCGTGGACCCAAGCTGAGTAACTTGGAAATTACCGAGCA 1380
consensus_11560#1 ------------------------------------------------------------
consensus_11560#3 ------------------------------------------------------------
consensus_11560#4 ------------------------------------------------------------
consensus_11560#2 ------------------------------------------------------------
consensus_11560#0 TTCGACGTGGACGTGACAAGTTGATGCAGTTTATAGTTTAAGACCAGCGTCAAGCAATGA 1440
consensus_11560#1 ------------------------------------------------------------
consensus_11560#3 -----------------------------------------------------------
consensus_11560#4 -----------------------------------------------------------
consensus_11560#2 -----------------------------------------------------------
consensus_11560#0 AGCGAGCACGCAACACAAGTACAACGAACAGTTCTGCTTGGGCCTATATAAAAAAGTTT 1499
consensus_11560#1 -----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||