These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11563#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2218 fasta sequence [CCGTGGTGGACTGCCTGCTTCCACTGAGTTCTAGTCCAGTGCCCTCGATTGATTCTCTCATCTCTCGCGCGCGGAGGGAAGGTCGGGAGGAGGAGGCGCGAGGCATCTCGCCCCAATCTCTGCTCGCCTCTTCGCTCTCGCGGCGTCGGCGGGCGGCGCCGATCGCCGGCGGCGGCGGCGGCGGCGGAGATGTTGGAGGACCAGGTCGCCTTCCTGCTGCAGAAGTACCTCGGCAACTATGTCCGGGGGCTCAGCAAGGAGGCCCTCAAGATCAGCGTGTGGAGAGGTGATGTAGAACTCACGAACATGCAGTTGAAGCCTGAGGCTCTCAATTCATTAAAGTTACCTGTGAGGGTGAAAGCTGGTTTTCTTGGTTCAGTGAAGCTCAAGGTCCCGTGGAGCAGGCTTGGTCAAGAGCCAGTTTTGGTTTATCTTGATCGAATATTTATATTAGCTGAACCAGCAACACAAGTTGAAGGTTGCAGTGAGGATGCCGTTCAAGAGGCAAAAAGGAGTAGAGTCAGGGAAATGGAAATGAAGTTATTGGAGAGCCAACAACAGCTGAAATCTGAACTGAATTCGTCATGGCTTGGGTCTTTCATTAGCACTGTAATTGGAAATATTAAGTTGTCAATTAGCAATATTCATATCAGATATGAGGACACAGAGAGCAATCCAGGCCACCCTTTTGCAGCAGGTTTGGCACTCTCAAAGCTTTCAGCATTTACTGTGGATGATCGTGGAAAGGAGACTTTTGCCACAGGCGGGGATTTGGACCGAGTTAAGAAGTCAGTCGAACTTGAGAGCCTGGCATTGTATTTTGATTCTGATAGCAGTCCTTGGAGTGTGGATAAGTCCTGGGAAGATCTATTACCTTCAGAATGGAGTCAGATTTTTGAGTTCAGAAAGCAGGACAGTTCTAATCCTCCTTCAAAAACACACACTTACATTTTACGACCTATCTCTGGCAAAGCCAAATATACGAAGATACAACTTGATGAAGCAAAGAAAACCGGACAGGCTTTGCAAAATGCAGCTGTTGATTTGGATGACGTTACTTTGTCTTTGTCTAAGGTCTGTACTCTCCCTCTCTCTCTCTCCCTCTGTGCCAATGGCACTGTTGAATGTGTACGCCTTGTTCTTTATATCAGGATGGCTACAGGGACGTCTTGAAGATGGCTGATAATTTTTCTTCTTTTAATCAACGTCTCAAATATGCTCACTACCGGCCATCTTTGCCAGTCAAATCTGACCCAAGGTCTTGGTGGAAGTATGCATACAAGGTGGTGGTTCATGAAACAAAGAAAGCAAGTGGAAATCTATCATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTATT] [+] EMBL AK119266 [CCGTGGTGGACTGCCTGCTTCCACTGAGTTCTAGTCCAGTGCCCTCGATTGATTCTCTCATCTCTCGCGCGCGGAGGGAAGGTCGGGAGGAGGAGGCGCGAGGCATCTCGCCCCAATCTCTGCTCGCCTCTTCGCTCTCGCGGCGTCGGCGGGCGGCGCCGATCGCCGGCGGCGGCGGCGGCGGCGGAGATGTTGGAGGACCAGGTCGCCTTCCTGCTGCAGAAGTACCTCGGCAACTATGTCCGGGGGCTCAGCAAGGAGGCCCTCAAGATCAGCGTGTGGAGAGGTGATGTAGAACTCACGAACATGCAGTTGAAGCCTGAGGCTCTCAATTCATTAAAGTTACCTGTGAGGGTGAAAGCTGGTTTTCTTGGTTCAGTGAAGCTCAAGGTCCCGTGGAGCAGGCTTGGTCAAGAGCCAGTTTTGGTTTATCTTGATCGAATATTTATATTAGCTGAACCAGCAACACAAGTTGAAGGTTGCAGTGAGGATGCCGTTCAAGAGGCAAAAAGGAGTAGAGTCAGGGAAATGGAAATGAAGTTATTGGAGAGCCAACAACAGCTGAAATCTGAACTGAATTCGTCATGGCTTGGGTCTTTCATTAGCACTGTAATTGGAAATATTAAGTTGTCAATTAGCAATATTCATATCAGATATGAGGACACAGAGAGCAATCCAGGCCACCCTTTTGCAGCAGGTTTGGCACTCTCAAAGCTTTCAGCATTTACTGTGGATGATCGTGGAAAGGAGACTTTTGCCACAGGCGGGGATTTGGACCGAGTTAAGAAGTCAGTCGAACTTGAGAGCCTGGCATTGTATTTTGATTCTGATAGCAGTCCTTGGAGTGTGGATAAGTCCTGGGAAGATCTATTACCTTCAGAATGGAGTCAGATTTTTGAGTTCAGAAAGCAGGACAGTTCTAATCCTCCTTCAAAAACACACACTTACATTTTACGACCTATCTCTGGCAAAGCCAAATATACGAAGATACAACTTGATGAAGCAAAGAAAACCGGACAGGCTTTGCAAAATGCAGCTGTTGATTTGGATGACGTTACTTTGTCTTTGTCTAAGGTCTGTACTCTCCCTCTCTCTCTCTCCCTCTGTGCCAATGGCACTGTTGAATGTGTACGCCTTGTTCTTTATATCAGGATGGCTACAGGGACGTCTTGAAGATGGCTGATAATTTTTCTTCTTTTAATCAACGTCTCAAATATGCTCACTACCGGCCATCTTTGCCAGTCAAATCTGACCCAAGGTCTTGGTGGAAGTATGCATACAAGGTGGTGGTTCATGAAACAAAGAAAGCAAGTGGAAATCTATCATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACGAGCTAAC ] [-] EMBL CB631634 [ TAATCG TGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTATT] [-] EMBL CB631672 [ ATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTATT] [+] EMBL AA749705 [ gagGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATNAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGA CTCCG CTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCAC TG TGTCGATCCCTCTGAA ] [-] EMBL CB631639 [ TTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATACCCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTAT ] consensusID : consensus_11563#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1370 fasta sequence [CTCCCCCTCCTCGTTCACGGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGAGATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCGGACAAGAACCGCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGCCTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGCAGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGAGGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGGCGTCTCAACCCATGGTTTGGAAGTACAAGGGCACGGCCTTGGTGGCTGACAAAGCACTCGAAGAATTGTATGTGACGATTCAGACACCAATTGGACTGAAAGAATCCAAGGTGCTAGTGACCGGAAGCATGAATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATGGAGTTTTTACCTGAACCTGCTTGGACTCCCTTGGTAAAGCAGAATGCACCAGTGAATTCTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAACCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCCAGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGTGGCAAGGGGCTCGATGAATGCCTATGGAGGAAATATTATAGGAAATATTATACCGGTTGCTTCATTTAATCGCACAATCTGGACAGCTGATTGTAATTCAGATGGCACACAGGCAGTCATAGGTACAAACAGTGGTGCTGCTTTTTTTGATTTGGAAAGAAGAGCATTATCATGGATGTATCACTGCAAGAGTGACATTCTCTCCCAACAATTTATGCAATCGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGGTGGTTCTCTCATCAGATGAGCACTACTTCTTANGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACAT] [+] EMBL CB631671 [CTCCCCCTCCTCGTTCACGGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGAGATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCGGACAAGAACCGCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGCCTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGCAGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGAGGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGGCGTCTCAACCCATGGTTTGGAAGTACAAGGGCACGGCCTTGGTGGCTGACAAAGCACTCGAAGAATTGTATGTGACGATTCAGACACCAATTGGACTGAAAGAATCCAAGGTGCTAGTGACCGGAAGCATGAATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATGGAGTTTTTACCTGAACCTGCTTGGACTCCCTTGGTAAAGCAGAATGCACCAGTGAATTCTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAACCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCCAGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGGGGCACGGGG ] [+] EMBL CB631633 [CTCCCCCTCCTCGTTCACGGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGAGATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCGGACAAGAACCGCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGCCTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGCAGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGAGGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGGCGTCTCAACCCATGGTTTGGAAGTACAAGGGCACGGCCTTGGTGGCTGACAAAGCACTCGAAGAATTGTATGTGACGATTCAGACACCAATTGGACTGAAAGAATCCAAGGTGCTAGTGACCGGAAGCATGAATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATGGAGTTTTTACCTGAACCTGCTTGGACTCCCTTGGTAAAGCAGAATGCACCAGTGAATTCTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAACCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCCAGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGTGGCAA ] [+] EMBL CF306514 [ agGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGTGGCAATGGGCTCGATGAATGCCTATGGAGGAAATATTATAGGAAATATTATACCGGTTGCTTCATTTAATCGCACAATCTGGACAGCTGATTGTAATTCAGATGGCACACAGGCAGTCATAGGTACAAACAGTGGTGCTGCTTTTTTTGATTTGGAAAGAAGAGCATTATCATGGATGTATCACTGCAAGAGTGACATTCTCTCCCAACAATTTATGCAATCGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGGTGGTTCTCTCATCAGATGAGCACTACTTCTTANGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACAT] consensusID : consensus_11563#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence [CCAAATTCCAAATGATTTTCCCATGTTTTCAGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCANGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTGTAAGTGCATAACTGCATACTAGACTGCTTTTTGCTATGAGCAAGTGTATAAGCGACTGTGTTCCAAATGTCTCTATTGATTTGTTTCAAAGCTGGAATTGTCTGCTCACACCTCAACATATAGTTTAGTAAGATGCCAACTGAAGTTCCATTTGGCCTTTATGCCACTATGAGCTGTTACCTGTACGNTAGTTGTTATCTGTGAAGTTAAGTTGCACCTTTTTTTTTTACTTGTTTCGGCTGCAAACTCAGAACTTGACATGCAATTGCTTCACTT] [+] EMBL CF310473 [CCAAATTCCAAATGATTTTCCCATGTTTTCAGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCANGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTGTAAGTGCATAACTGCATACTAGACTGCTTTTTGCTATGAGCAAGTGTATAAGCGACTGTGTTCCAAATGTCTCTATTGATTTGTTTCAAAGCTGGAATTGTCTGCTCACACCTCAACATATAGTTTAGTAAGATGCCAACTGAAGTTCCATTTGGCCTTTATGCCACTATGAGCTGTTACCTGTACGNTAGTTGTTATCTGTGAAGTTAAGTTGCACCTTTTTTTTTTACTTGTTTCGGCTGCAAACTCAGAACTTGACATGCAATTGCTTCACTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 CCGTGGTGGACTGCCTGCTTCCACTGAGTTCTAGTCCAGTGCCCTCGATTGATTCTCTCA 60 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 TCTCTCGCGCGCGGAGGGAAGGTCGGGAGGAGGAGGCGCGAGGCATCTCGCCCCAATCTC 120 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 TGCTCGCCTCTTCGCTCTCGCGGCGTCGGCGGGCGGCGCCGATCGCCGGCGGCGGCGGCG 180 consensus_11563#1 ------------------------------------------CTCCCCCTCCTCGTTCAC 18 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GCGGCGGAGATGTTGGAGGACCAGGTCGCCTTCCTGCTGCAGAAGTACCTCGGCAACTAT 240 consensus_11563#1 GGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGA 78 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GTCCGGGGGCTCAGCAAGGAGGCCCTCAAGATCAGCGTGTGGAGAGGTGATGTAGAACTC 300 consensus_11563#1 GATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCG-GACAAGAACC 137 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 ACGAACATGCAGTTGAAGCCTGAGGCTCTCAATTCATTAAAGTTACCTGTGAGGGTGAAA 360 consensus_11563#1 GCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGC 197 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GCTGGTTTTCTTGGTTCAGTGAAGCTCAAGGTCCCGTGGAGCAGGCTTGGTCAAGAGCCA 420 consensus_11563#1 CTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGC 257 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GTTTTGGTTTATCTTGATCGAAT--ATTTATATTAGCTGAACCAGCAACACAAGTTGAAG 478 consensus_11563#1 AGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGA 317 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GTTGCAGTGAGGATGCCGTTCAAGAGGCAAAAAGGAGTAGAGTCAGGGAAATGGAAATGA 538 consensus_11563#1 GGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGG---CGTCTCAACCCATGGTTT 374 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 AGTTATTGGAGAGCCAACAACAGCTGAAATCTGAACTGAATTCGTCATGGCTTGGGTCTT 598 consensus_11563#1 GGA--AGTACAAGGGCACGGCCTTGGTGGCTGACAA--AGCACTCGAAGAATTGTATGTG 430 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 TCATTAGCACTGTAATTGGAAATATTAAGTTGTCAATTAGCAATATTCATATCAGATATG 658 consensus_11563#1 ACGATTCAGACACCAATT-GGACTGAAAGAATCCAAGGTGCTAGTGACCG--GAAGCATG 487 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 AGGACACAGAGAGCAATCCAGGCCACCCTTTTGCAGCAGGTTTGGCACTCTCAAAGCTTT 718 consensus_11563#1 AATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATG 547 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 CAGCATTTACTGTGGATGATCGTGGAAAGGAGACTTTTGCCACAGGCGGGGATTTGGACC 778 consensus_11563#1 GAGTTTTTACCTGAACCTGCTTGGACTCCCTTGG--TAAAGCAGAATGCACCAGTGAATT 605 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GAGTTAAGAAGTCAGTCGAACTTGAGAGCCTGGCATTGTATTTTGATTCTGATAGCAGTC 838 consensus_11563#1 CTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAA 665 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 CTTGGAGTGTGGATAAGTCCTGGGAAGATCTATTACCTTCAGAATGGAGTCAGATTTTTG 898 consensus_11563#1 CCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCC 725 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 AGTTCAGAAAGCAGGACAGTTCTAATCCTCCTTCAAAAACACACACTTACATTTTACGAC 958 consensus_11563#1 AGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTAT-- 783 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 CTATCTCTGGCAAAGCCAAATATACGAAGATACAACTTGATGAAGCAAAGAAAACCGGAC 1018 consensus_11563#1 -GGATCTGTCTGATAC---TATTGACGTGGC--AAGGGGCTCGATGAATGCCTATGGAGG 837 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 AGGCTTTGCAAAATGCAGCTGTTGATTTGGATGACGTTACTTTGTCTTTGTCTAAGGTCT 1078 consensus_11563#1 AAATATTATAGGAAATATTATACCGGTTGCTTCATTTAATCGCACAATCTGGACAGCTGA 897 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GTACTCTCCCTCTCTCTCTCTCCCTCTGTGCCAATGGCACTGTTGAATGTGTACGCCTTG 1138 consensus_11563#1 TTGTA---ATTCAGATGGCACACAGGCAGTCATAGGTACAAACAGTGGTGCTGCTTTTTT 954 consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 TTCTTTATATCAGGATGGCTACAGGGACGTCTTGAAGATGGCTGATAATTTTTCTTCTTT 1198 consensus_11563#1 TGAT-----TTGGAAAGAAGAGCATTATCATGGATGTATCACTG-CAAGAGTGAC--ATT 1006 consensus_11563#2 -------------------------------------------C-CAAATTCCAA--ATG 14 consensus_11563#0 TAATCAACGTCTCAAATATGCTCACTACCGGCCATCTTTGCCAGTCAAATCTGACCCAAG 1258 *** * * consensus_11563#1 CTCTCCCAACAATTTATGCAATCGGGAAATGTTGTGCTATGCG------GCTTGAGGAA- 1059 consensus_11563#2 ATTTTCCCATGTTTT------CAGGGAAATGTTGTGCTATGCG------GCTTGAGGAA- 61 consensus_11563#0 GTCTTGGTGGAAGTATGCATACAAGGTGGTGGTTCATGAAACAAAGAAAGCAAGTGGAAA 1318 * * * ** ** * * * ** * **** consensus_11563#1 -------TGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCG 1112 consensus_11563#2 -------TGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCG 114 consensus_11563#0 TCTATCATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCG 1378 ***************************************************** consensus_11563#1 AGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATC 1172 consensus_11563#2 AGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATC 174 consensus_11563#0 AGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATC 1438 ************************************************************ consensus_11563#1 GTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAG 1232 consensus_11563#2 GTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAG 234 consensus_11563#0 GTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAG 1498 ************************************************************ consensus_11563#1 TTTGCAGCTTGGGTGGTTCTCTCATCAGATGAGCACTACTTCTTANGGAGCTCCATGGAT 1292 consensus_11563#2 TTTGCANGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGAT 294 consensus_11563#0 TTTGCAGCTT-GGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGAT 1557 ****** * ********************************** ************** consensus_11563#1 GGATCTATCAA-GC---------TATTCGATCTCCGTCT-CATTCAGAAAGGGCCTATAC 1341 consensus_11563#2 GGATCTGTAAGTGCATAACTGCATACTAGACTGCTTTTTGCTATGAGCAAGTGTATAAGC 354 consensus_11563#0 GGATCTATCAA-GC---------TATTCGATCTCCGTCT-CATTCAGAAAGGGCCTATAC 1606 ****** * * ** ** * ** * * * * * ** *** * ** * consensus_11563#1 AGTCTTATGCAGGGCATATAAATTCACAT------------------------------- 1370 consensus_11563#2 GACTGTGTTCCAAATGTCTCTATTGATTTGTTTCAAAGCTGGAATTGTCTGCTCACACCT 414 consensus_11563#0 AGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTG 1666 * * * * * *** * * consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 CAACATATAGTTTAGTAAGATGCCAACTGAAGTTCCATTTGGCCTTTA-TGCCACTATGA 473 consensus_11563#0 AAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGG 1726 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 GCTGTTACCTGTACGNTAGTTGTTATCTGTGAAGTTAAGTTGCACCTTTTTTTTTTACTT 533 consensus_11563#0 GCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAG 1786 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 GTTTCGGCTGCAAACTCAGAACTTGACATGCAATTGCTTCACTT---------------- 577 consensus_11563#0 AAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTT 1846 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTG 1906 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 ACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACT 1966 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 GAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGA 2026 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 AGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAA 2086 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 CGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTAC 2146 consensus_11563#1 ------------------------------------------------------------ consensus_11563#2 ------------------------------------------------------------ consensus_11563#0 TGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTAC 2206 consensus_11563#1 ------------ consensus_11563#2 ------------ consensus_11563#0 AAGCTAACTATT 2218 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||