These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11570#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3184 fasta sequence [CCAAGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTCCGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGGCATGACCATCCTGGTCTGGATCCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTCAGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGGTGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGGAGTGGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTAATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAGAGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAGAATGTGCATACCACCAATCTTTTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAAATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATCATAGTCCCATCCTAGCAAGATGGATTGGCCATCCGATGATGATAATGCCTCAGTGTTTTCAGTGAATTGAATTAATGGGGGTATGGCTTCTTCTGCTTGAGACATTCAGTTTGTTCAGATACTAATAACTATTGCTTTTAGTTTACTTTCTTACCCTCAATTTGCTTTTATGATTGTTTAGTTGTGAATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAACTTGATGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAGGGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATCGTAGGACTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGTAGTTGTCCTGTGACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCATGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATTAATCTGATCTTCAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTGGTTGTAGATTAATGTCTTAGTTTGCAAAAACTGAGCAGATTAAACTTGGTGGAAGTCACTTGGCACAAGTGCTGCTAGCAAGGGAAACGAGGAACACTAGAGATTTGAGTACCCGCCCAGTACAATTTATAGCCACTGCTGGAACTAGATGTTGGAAGGGTAGTCTTTTGGGTAGGATCCAAAAGACCCCTGCACATATATGATCCTGGAATATGCACGTATAAGCCTCTAGTGGTGCAGTCCTCTCCAAGGTCTCTGGCGTGTTGTCGGGCAATGCCTACGATCCCGAAGTTCTCTGCCTGTTAGTCTCCCTTTCCATCTCGGCTTACCATGGGAGAACCTGGCCTTTAGATTGTGCACTCATAATGTTGAATTCGGTAATATCCTAAACAAAATCAATTTTCTCTCTGTTGAATACGTCAATTCGGTCATGTTTAGATTACTTCAATATTAATTAGTGTACTGATGCCAAATAGTTCTGAACTACTGATCATTTTGGAAGCCACGACTGTTTTTTTCGAAGATAAAAAATGGTAGGTGCTCTACCTTTCCATCAAGGCCAAATCATGAGCAAACAATTTGCCATGTATGAATGAAGAATTGACACTATTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAAGCAGGCAAGTTAAATTTCATAGCCATCCCATGAGGCCATGATGGTAATGCCTTAGTTTTATCAGTGAGATGTTCTTCTGCCTCAGATGTTCAGTTTGCTCAGATACTAATAGCTCTTTTTTTAGTTTACTTACTCACCCTCAATTTGCTTTTATGTTTGTTTAATTATAGATAGTACTTCAGTTTGCAGAAGATGATCAGATCAAACTTGGTGGAAATCACTCAGCACAAGTGCTGCTGACAAGAGAGTAGACAGTAGAAAAACAGGCCAGGCACATATTCCAGAAGTACCCCAGTACAATGTAAAGCAACTGCTGGCTAGGATCAGTAGGACTGCAGCACATATATGATACATCTGCAGAAGTGGAGTTCACACATCTTGCTGGAGTTGGCCTGTACACAAGACGCCTACTAAGTTTCTAGAAAATTGTGATTAATCTGTTTCGAAGGAATCATACTGTTAATGGGTGTGCAGGAATCGTTCTCTTGTTGTATTGGAGCCTGCAAATAGTTGTACATTCTTAGAGATGCCAGCTGTTTTTTTTTTTTGTACAGTCTTAAGTAATTGTAAATGTAATGTAAGATGTAATTGTCAATATGCATCCTGGTGCCTGGTGACATGAATTAGGGGAGCTGCAGCACTGTAAATTGATGCAAGAGAAGTGCCAGGGTTCCAGTGGCACTCATGTTATCTGAAGTGGCTGTTCTATGTT] [+] EMBL AK106862 [CCAAGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTCCGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGGCATGACCATCCTGGTCTGGATCCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTCAGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGGTGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGGAGTGGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTAATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAGAGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAGAATGTGCATACCACCAATCTTTTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAAATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATCATAGTCCCATCCTAGCAAGATGGATTGGCCATCCGATGATGATAATGCCTCAGTGTTTTCAGTGAATTGAATTAATGGGGGTATGGCTTCTTCTGCTTGAGACATTCAGTTTGTTCAGATACTAATAACTATTGCTTTTAGTTTACTTTCTTACCCTCAATTTGCTTTTATGATTGTTTAGTTGTGAATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAACTTGATGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAGGGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATCGTAGGACTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGTAGTTGTCCTGTGACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCATGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATT ] [+] EMBL AK119280 [ AGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTCCGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGGCATGACCATCCTGGTCTGGATTCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTCAGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGGTGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGGAGTGGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTAATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAGAGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAGAATGTGCATACCACCAATCTTTTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAAATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATCATAGTCCCATCCTAGCAAGATGGATTGGCCATCCGATGATGATAATGCCTCAGTGTTTTCAGTGAATTGAATTAATGGGGGTATGGCTTCTTCTGCTTGAGACATTCAGTTTGTTCAGATACTAATAACTATTGCTTTTAGTTTACTTTCTTACCCTCAATTTGCTTTTATGATTGTTTAGTTGTGAATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAACTTGATGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAGGGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATCGTAGGACTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGTAGTTGTCCTGTGACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCATGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATTAATCTGATCTTCAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTGGTTGTAGATTAATGTCTTAGTTTGCAAAAACTGAGCAGATTAAACTTGGTGGAAGTCACTTGGCACAAGTGCTGCTAGCAAGGGAAACGAGGAACACTAGAGATTTGAGTACCCGCCCAGTACAATTTATAGCCACTGCTGGAACTAGATGTTGGAAGGGTAGTCTTTTGGGTAGGATCCAAAAGACCCCTGCACATATATGATCCTGGAATATGCACGTATAAGCCTCTAGTGGTGCAGTCCTCTCCAAGGTCTCTGGCGTGTTGTCGGGCAATGCCTACGATCCCGAAGTTCTCTGCCTGTTAGTCTCCCTTTCCATCTCGGCTTACCATGGGAGAACCTGGCCTTTAGATTGTGCACTCATAATGTTGAATTCGGTAATATCCTAAACAAAATCAATTTTCTCTCTGTTGAATACGTCAATTCGGTCATGTTTAGATTACTTCAATATTAATTAGTGTACTGATGCCAAATAGTTCTGAACTACTGATCATTTTGGAAGCCACGACTGTTTTTTTCGAAGATAAAAAATGGTAGGTGCTCTACCTTTCCATCAAGGCCAAATCATGAGCAAACAATTTGCCATGTATGAATGAAGAATTGACACTATTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAAGCAGGCAAGTTAAATTTCATAGCCATCCCATGAGGCCATGATGGTAATGCCTTAGTTTTATCAGTGAGATGTTCTTCTGCCTCAGATGTTCAGTTTGCTCAGATACTAATAGCTCTTTTTTTAGTTTACTTACTCACCCTCAATTTGCTTTTATGTTTGTTTAATTATAGATAGTACTTCAGTTTGCAGAAGATGATCAGATCAAACTTGGTGGAAATCACTCAGCACAAGTGCTGCTGACAAGAGAGTAGACAGTAGAAAAACAGGCCAGGCACATATTCCAGAAGTACCCCAGTACAATGTAAAGCAACTGCTGGCTAGGATCAGTAGGACTGCAGCACATATATGATACATCTGCAGAAGTGGAGTTCACACATCTTGCTGGAGTTGGCCTGTACACAAGACGCCTACTAAGTTTCTAGAAAATTGTGATTAATCTGTTTCGAAGGAATCATACTGTTAATGGGTGTGCAGGAATCGTTCTCTTGTTGTATTGGAGCCTGCAAATAGTTGTACATTCTTAGAGATGCCAGCTGTTTTTTTTTTTTGTACAGTCTTAAGTAATTGTAAATGTAATGTAAGATGTAATTGTCAATATGCATCCTGGTGCCTGGTGACATGAATTAGGGGAGCTGCAGCACTGTAAATTGATGCAAGAGAAGTGCCAGGGTTCCAGTGGCACTCATGTTATCTGAAGTGGCTGTTCTATGTT] [+] EMBL CF306625 [ GGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCT ] [+] EMBL CA764003 [ TGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTGATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTA ] consensusID : consensus_11570#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2560 fasta sequence [TACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTTTGCAGAAGATGTTCATATCAAACTTGGTGTAAGTCACTCGGCACAAGTGCTGCTGGCAAGATAGTAGAGAGTAGAGAAACAAGGCTGGACTGGAGAGTACCCCAGTACAATGTAAAACAACTGCTGGCTAGGCTCGTCGAAACTCTAGGACATATATGACCCGTTTGCGTAAGTGGAGGTGACACATCTTGCTGGAGTTGGCTTGTAGACAATAACCCAACTGAGTTTTTAGAAAATTGTGGCAGTGTAGTATTTTGCTGCTCGCTTTAGATTGCAGTTAATCAGTTTCAAAGGAATCATACTGTTAATCGGTTGAGCACAGAAGGAGAGGCCCTGGACCATGGTGGCATATCGGATGGGAGATGATGTAGATGGCATTTTCAGATCAGTGGCTGAATATATCATCGGTGATGGAGCTGATAACAGATACTGGACGACAAATTGGACGGGAAATGGTTGCTTCGCCTGGAGGTGGCCTATCCTGTACTCCTATGTAGGACACTCCAGGTTGTCGGTCGCCCAGGCCATGGTTAATCATAGATGGGTGCGAGATTTGCAGGGTTCCTTGTTCAATGAAGCCTTGGGTGACTTCTTTCAGCTTTGGGACGAGGTTCATGATGTGGCTCTACAGCCTAATGCAGATGCAATCAGATTGAAACTGACTGGAGATAGGGCAATTCTCGGCTGCCTCGGCATATGATCTTTTCTTCATGG-CCAAAGAGGACTG-CCCTTATGGAGAGATGCTGAGGCACTCCAGACTCCAGAGCACCATTGAGAGTCTGTTTTTTCATGTGACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTGGCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGACTGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGCTGGATTAATGTTGACTTTCCAAT-CCCTGGTGATGAAGATCAACCGCTCACAGACAGGTAGCTTCGGG-CCAGGATGCATTTTCATGTAATGTAAGATGTAATTGTAAGTATACATCCTGGTACTTGACATGAATTA-GGGAGCTGCAGCGCTGTTTTGCAGCTGCTAGCATGTTCTGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTCATGTTATCTGAAATGGCTGTTCTATGTTCTCTGAGCTAA] [+] EMBL AK100476 [TACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTTTGCAGAAGATGTTCATATCAAACTTGGTGTAAGTCACTCGGCACAAGTGCTGCTGGCAAGATAGTAGAGAGTAGAGAAACAAGGCTGGACTGGAGAGTACCCCAGTACAATGTAAAACAACTGCTGGCTAGGCTCGTCGAAACTCTAGGACATATATGACCCGTTTGCGTAAGTGGAGGTGACACATCTTGCTGGAGTTGGCTTGTAGACAATAACCCAACTGAGTTTTTAGAAAATTGTGGCAGTGTAGTATTTTGCTGCTCGCTTTAGATTGCAGTTAATCAGTTTCAAAGGAATCATACTGTTAATCGGTTGAGCACAGAAGGAGAGGCCCTGGACCATGGTGGCATATCGGATGGGAGATGATGTAGATGGCATTTTCAGATCAGTGGCTGAATATATCATCGGTGATGGAGCTGATAACAGATACTGGACGACAAATTGGACGGGAAATGGTTGCTTCGCCTGGAGGTGGCCTATCCTGTACTCCTATGTAGGACACTCCAGGTTGTCGGTCGCCCAGGCCATGGTTAATCATAGATGGGTGCGAGATTTGCAGGGTTCCTTGTTCAATGAAGCCTTGGGTGACTTCTTTCAGCTTTGGGACGAGGTTCATGATGTGGCTCTACAGCCTAATGCAGATGCAATCAGATTGAAACTGACTGGAGATAGGGCAATTCTCGGCTGCCTCGGCATATGATCTTTTCTTCATGG CCAAAGAGGACTG CCCTTATGGAGAGATGCTGAGGCACTCCAGACTCCAGAGCACCATTGAGAGTCTGTTTTTTCATGTGACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTGGCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGACTGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGCTGGATTAATGTTGACTTTCCAAT CCCTGGTGATGAAGATCAACCGCTCACAGACAGGTAGCTTCGGG CCAGGATGCATTTTCATGTAATGTAAGATGTAATTGTAAGTATACATCCTGGTACTTGACATGAATTA GGGAGCTGCAGCGCTGTTTTGCAGCTGCTAGCATGTTCTGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTC ] [+] EMBL CF324248 [ TTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGA ] [+] EMBL BQ908549 [ TTCTTCATGGCCCAAAGAGGACTGCCCCTTATGGAGAGATGCTGA GCACTCCAGACTCCAGAGCACCATTGAGAGTCTGTTTTTTCATGTGACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTGGCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGACTGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGCTGGATTAATGTTGACTTTCCAATCCCCTGGTGATGAAGATCAACCGCTCACAGACTGGTAGCTTCGGGCCCAGGATGCATTTTCATGTAATGTAAGATATAATTGTAAGTATACATCCTGGTACTTGACATGAATTAGGGGAGCTGCAGCGCTGTTTTGCAGCTGCTAGCATGTTCTGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTCATGTTATCTGAAATGGCTGTTCTATGTTCTCTGAGCTAA] consensusID : consensus_11570#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1383 fasta sequence [CTACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAATAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAGTTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTACTTTGTTACCGCTAAAGAGGGATGCGTATAATGTAGTATTGTATTGCTTGTTTGATACTTTCGTTACTAATGCTATCGAGCCTCACTAA] [+] EMBL AK111393 [CTACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAATAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAGTTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTACTTTGTTACCGCTAAAGAGGGATGCGTATAATGTAGTATTGTATTGCTTGTTTGATACTTTCGTTACTAATGCTATCGAGCCTCACTAA] consensusID : consensus_11570#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [TTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAAC] [+] EMBL CF305621 [TTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CCAAGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTC 60 consensus_11570#1 --------------------TACTCCCCACCGGCCAGTGGCCGCCGC-GCCGTCGTCCGC 39 consensus_11570#2 -------------------CTACTCCCCACCGGCCAGTGGCCGCCGC-GCCGTCGTCCGC 40 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGG 120 consensus_11570#1 CGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGG---AGGGCTCCAGCATGGTCCG- 95 consensus_11570#2 CGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGG---AGGGCTCCAGCATGGTCCG- 96 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CATGACCATCCTGGTCTGGATCCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTC 180 consensus_11570#1 ------GCGAGGAGCCACGACCCGCGGCACAT---CGACATA-TCGGCGGCG-GGAATGG 144 consensus_11570#2 ------GCGAGGAGCCACGACCCGCGGCACAT---CGACATA-TCGGCGGCG-GGAATGG 145 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 AGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGG 240 consensus_11570#1 TGT-GCTTTGTCGCCGTCGTGGGGGGGCAC----GGCCTGGAAGCGGATCTCCATTGCCG 199 consensus_11570#2 TGT-GCTTTGTCGCCGTCGTGGGGGGGCAC----GGCCTGGAAGCGGATCTCCATTGCCG 200 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGG-----AGTGGCG 295 consensus_11570#1 CAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAA-TTG 258 consensus_11570#2 CAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAA-TTG 259 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CAGTCGTCTCCGAGGTCTCGAG----------TTCGATCTATTTGTCACCGAGAAAATTG 345 consensus_11570#1 GAGCTCGAACAGCCATGGCGGAACCCG-------TGGGCGAACGAGCAATGCCCCCC--- 308 consensus_11570#2 GAGCTCGAACAGCCATGGCGGAACCCG-------TGGGCGAACGAGCAATGCCCCCC--- 309 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCC 405 consensus_11570#1 AACCCCGGCG-TCACAGCAAG----------GTCCTGACGA---TGTTGGAAAACCATAA 354 consensus_11570#2 AACCCCGGCG-TCACAGCAAG----------GTCCTGACGA---TGTTGGAAAACCATAA 355 consensus_11570#3 ----------------------------------------------TTGGAAAACCATAA 14 consensus_11570#0 AACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGG 465 *** * consensus_11570#1 ATGTAGTGCCTCAGTTTTATCATTGAATTG-----GACTAATCACTAATGGGGTGGGGCA 409 consensus_11570#2 ATGTAGTGCCTCAGTTTTATCATTGAATTG-----GACTAATCACTAATGGG-------- 402 consensus_11570#3 ATGTAGTGCCTCAGTTTTATCATTGAATTG-----GACTAATCACTAATGGGGTGGGGCA 69 consensus_11570#0 GACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGG 525 ** ** ** ** ** * * * ** * * ** * consensus_11570#1 TCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTT--TAATT 467 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 TCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTT--TAATT 127 consensus_11570#0 AAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGT 585 consensus_11570#1 TTAGATTTCTAGGTAGTACTTCATTTTGCAAAA-GATGAAAAGATTAAACTTGGTCGAAG 526 consensus_11570#2 ----ATTTCTAGGTAGTACTTCATTTTGCAAAA-GATGAAAAGATTAAACTTGGTCGAAG 457 consensus_11570#3 TTAGATTTCTAGGTAGTACTTCATTTTGCAAAA-GATGAAAAGATTAAACTTGGTCGAAG 186 consensus_11570#0 GGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAG 645 * ** ** ** * * * * * ***** ********* **** consensus_11570#1 TCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGG------------AGCCAGCACTG 574 consensus_11570#2 TCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTG 517 consensus_11570#3 TCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTG 246 consensus_11570#0 TCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGA--GAGTGAGTACCC 703 ************* ** **** ****** * **** ** ** ** consensus_11570#1 -ACTGGAAGCAGGTCTCCAGTGG-----CACAGGCCT-----CTACAAGGTCTCCG---- 619 consensus_11570#2 -ACTGGAAGCAGGTCTCCAGTGG-----CACAGGCCT-----CTACAAGGTCTCCG---- 562 consensus_11570#3 -ACTGGAAGCAGGTCTCCAGTGG-----CACAGGCCT-----CTACAAGGTCTCCG---- 291 consensus_11570#0 TGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGC 763 ** *** ** * * ** ** ** ** ** ** * **** consensus_11570#1 ATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTT 679 consensus_11570#2 ATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTT 622 consensus_11570#3 ATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTT 351 consensus_11570#0 ATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGT 823 ** * * ** ** * * * * * * ** * * * ** * ** * consensus_11570#1 CCATCTCAGTTTACCA------TGGGAAGACCTTACCTTCCTAGATTGTGCACTA-CTCA 732 consensus_11570#2 CCATCTCAGTTTACCA------TGGGAAGACCTTACCTTCCTAGATTGTGCACTA-CTCA 675 consensus_11570#3 CCATCTCAGTTTACCA------TGGGAAGACCTTACCTTCCTAGATTGTGCACTA-CTCA 404 consensus_11570#0 CTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGA 883 * ** ** ** *** ** ** * * **** ***** ** * consensus_11570#1 TGTTGA-------CTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTT 785 consensus_11570#2 TGTTGA-------CTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTT 728 consensus_11570#3 TGTTGA-------CTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTT 457 consensus_11570#0 TGGTTAGCCTCCCCTTCCATCTCAGCTCAC-CATGGGTCCCATTTCTCTGTTGAATCCTT 942 ** * * **** * * * **** **** * * * ************ *** consensus_11570#1 GAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTA- 844 consensus_11570#2 GAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTA- 787 consensus_11570#3 GAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTA- 516 consensus_11570#0 GAATTTGAAAATAGTTTAATTACTGCAATATTAATTA-CTTTGCTGGTGCCAATTGGTAG 1001 ******* ** * ******* ************ ** ***** **** ** *** consensus_11570#1 -------CTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAA-AGATAA 896 consensus_11570#2 -------CTGAATAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAA-AGATAA 839 consensus_11570#3 -------CTGAAC----------------------------------------------- 522 consensus_11570#0 TTTGGTACTGTACTACTGATTATTTTGGAA-CCATCACTGTAATTTTTTTTTATATATGA 1060 *** * consensus_11570#1 AATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAG 956 consensus_11570#2 AATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAG 899 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 AAAAGGCAG-----AAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAG 1115 consensus_11570#1 AGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTA 1016 consensus_11570#2 AGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTA 959 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 AGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAG-AATGTGCATA 1174 consensus_11570#1 GAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCA 1076 consensus_11570#2 GAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAGTTATAGGTATCCA 1019 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CCACCAATCTT------TTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAA 1228 consensus_11570#1 TGGATTAGTCTTCTATCTCCT-TGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTT 1135 consensus_11570#2 TGGATTAGTCTTCTATCTCCT-TGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTT 1078 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 ATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATC--ATAGTCCCAT--CCTA 1284 consensus_11570#1 TTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTT 1195 consensus_11570#2 TTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTT 1138 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GCAAGATGGATTG-GCCATCCGA---TGATGAT-AATGCCTCAGTGTTTTCAGTGAATT- 1338 consensus_11570#1 TCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCA 1255 consensus_11570#2 TCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCA 1198 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 -----GAATTAATGGGGGTATGGCTTCTTCTGCTTGA--GACATTCAGTTTGTTCAGATA 1391 consensus_11570#1 TGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTT 1315 consensus_11570#2 TGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTT 1258 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CTAATAACTATTGCTTT---TAGTTTACTTTCTTACCC---------TCAATTTGCTTTT 1439 consensus_11570#1 ATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTTTGCAGAAGATGT--TCATATCAAA 1373 consensus_11570#2 ATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTACTT------TGT--TACCGCTAAA 1310 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 ATGATTG--TTTAGTTGTGA--ATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAA 1495 consensus_11570#1 CTTGG-TGTAAGTCACTCGGCACAAGTGCTGCTGGCAAGATAGTAGAG------AGTAGA 1426 consensus_11570#2 GAGGGATGCGTATAATGTAGTATT-GTATTGCTTGTTTGATACTTTCGTT----ACTAAT 1365 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CTTGA-TGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAG 1554 consensus_11570#1 GAAACAAGGCTGGACTGGAGAGTACCCCAGTACAATGTAAAACAACTGCTGGCTAGGCTC 1486 consensus_11570#2 GCTATCGAGCCTCACTAA------------------------------------------ 1383 consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATC 1614 consensus_11570#1 GTCGAAACTCTAGGACATATATGACCCGTTTGCGTAAGTGGAGGTGACACATCTTGCTGG 1546 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GTAGGA-CTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGT 1673 consensus_11570#1 AGTTGGCTTGTAGACAATAACCCAACTGAGTTTTTAGAAAATTGTGGCAGTGTAGTATTT 1606 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 AGTTGTCCTGT-GACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCA----------- 1721 consensus_11570#1 TGCTGCTCGCTTTAGATTGCAGTTAATCAGTTTCAAAGGAATCATACTGTTAATCGG--- 1663 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATTAATCTGATC 1781 consensus_11570#1 TTGAGCACAGAAGGAGAGGCCCTGGACCATGGTGGCATATCGGATGGGAGATGATGTAGA 1723 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TTCAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTGGTTGTAGATTAATGTCTTAGT 1841 consensus_11570#1 TGGCATTTTCAGATCAGT---GGCTGAATATATCATCGGTGATGGAGCTGATAACAGATA 1780 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TTGCAAAAACTGAGCAGATTAAACTTGGTGGAAGTCACTTGGCACAAGTGCTGCTAGCAA 1901 consensus_11570#1 CTGGACGACAAATTGGACGGGAAATGGTTGCTTCGCCTGGAGG-----TGGCCTATCCTG 1835 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GGGAAACGAGGAACACTAGAGATTTGAGTACCCGCCCAGTACAATTTATAGCCACTGCTG 1961 consensus_11570#1 TACTCCTATGTAGGACACTCCAGGTTGTCGGTCG--CCCAGGCCATGGTTAATCATAGAT 1893 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GAACTAGATGTTGGAAGGGTAGTCTTTTGGGTAGGATCCAAAAGACCCCTGCACATATAT 2021 consensus_11570#1 GGGTGCGAGATTTGCAGGGTTCCTTGTTCAATGAAGC------CTTGGGTGACTTCTTTC 1947 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GATCCTGGAATATGCACGTATAAGCCTCTAGTGGTGCAGTCCTCTCCAAGGTCTCTGGCG 2081 consensus_11570#1 AGCTTTGGGACGAGGTTCATGATGTGGCTCTACAGC-CTAATGCAGATGCAATCAGATTG 2006 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TGTTGTCGGGCAATGCCTACGATCCCGAAGTTCTCTGCCTGTTAGTCTCCCTTTCCATCT 2141 consensus_11570#1 AAACTGACTGGAGATAGGGCAATTCTCGGCTGCCTCGGCATATGATCTTTTCTTCATGGC 2066 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CGGCTTACCATGGGAGAACCTGGCCTTTAGATTGTGCACTCATAATGTTGAATTCGGTAA 2201 consensus_11570#1 CAAAGAGGACTGCCCTTATGGAGAGATGCTGAGGCACTCCAGACTCCAGAGCACCATTGA 2126 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TATCCTAAACAAAATCAATTTTCTCTCTGTTGAATACGTCAATTCGGTCATGTTTAGATT 2261 consensus_11570#1 GAGTCTGTTTTTTCATGTG-ACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTG 2185 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 ACTTCAATATTAATTAGTGTACTGATGCCAAATAGTTCTGAACTACTGATCATTTTGGAA 2321 consensus_11570#1 GCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGAC 2245 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GCCACGACTGTTTTTTTCGAAGATAAAAAATGGTAGGTGCTCTACCTTTCCATCAAGGCC 2381 consensus_11570#1 TGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGC 2305 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 AA--ATCATGAGCAAACAATTTGCCATGTATGAATGAAGAATTGACACTATTTGGCTAAA 2439 consensus_11570#1 TGGATTAATGTTGACTTTCCAATCCCTGGTGATGAAGATCAACCGC-TCACAGACAGGTA 2364 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TGGATTGTAGTCTCATCCTCCATGATCCACAAAGCAGGCAAGTTAAATTTCATAGCCATC 2499 consensus_11570#1 GCTTCGGGCCAGGATG----CATTTTCATGTAATGTAAGATGTAATTGTAAGTATACATC 2420 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CCATGAGGCCATGATGGTAATGCCTTAGTTTTATCAGTGAGATGTTCTTCTGCCTCAGAT 2559 consensus_11570#1 CTGGTACTTGACATGAATTAGGGAGCTGCAGCGCTGTTTTGC--AGCTGCTAGCATGTTC 2478 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GTTCAGTTTGCTCAGATACTAATAGCTCTTTTTTTAGTTTACTTACTCACCCTCAATTTG 2619 consensus_11570#1 TGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTCATGTTATCTGAAATGGC 2538 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CTTTTATGTTTGTTTAATTATAGATAGTACTTCAGTTTGCAGAAGATGATCAGATCAAAC 2679 consensus_11570#1 TGTTCTATGTTCTCTGAGCTAA-------------------------------------- 2560 consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TTGGTGGAAATCACTCAGCACAAGTGCTGCTGACAAGAGAGTAGACAGTAGAAAAACAGG 2739 consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 CCAGGCACATATTCCAGAAGTACCCCAGTACAATGTAAAGCAACTGCTGGCTAGGATCAG 2799 consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TAGGACTGCAGCACATATATGATACATCTGCAGAAGTGGAGTTCACACATCTTGCTGGAG 2859 consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TTGGCCTGTACACAAGACGCCTACTAAGTTTCTAGAAAATTGTGATTAATCTGTTTCGAA 2919 consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GGAATCATACTGTTAATGGGTGTGCAGGAATCGTTCTCTTGTTGTATTGGAGCCTGCAAA 2979 consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TAGTTGTACATTCTTAGAGATGCCAGCTGTTTTTTTTTTTTGTACAGTCTTAAGTAATTG 3039 consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 TAAATGTAATGTAAGATGTAATTGTCAATATGCATCCTGGTGCCTGGTGACATGAATTAG 3099 consensus_11570#1 ------------------------------------------------------------ consensus_11570#2 ------------------------------------------------------------ consensus_11570#3 ------------------------------------------------------------ consensus_11570#0 GGGAGCTGCAGCACTGTAAATTGATGCAAGAGAAGTGCCAGGGTTCCAGTGGCACTCATG 3159 consensus_11570#1 ------------------------- consensus_11570#2 ------------------------- consensus_11570#3 ------------------------- consensus_11570#0 TTATCTGAAGTGGCTGTTCTATGTT 3184 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||