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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11571#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3308 fasta sequence
[GGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCAC-TTACATTTGCTATTCA-GGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCT-AGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGA-GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGT--ATTTTTGCGAT-AACTTTCTTGTAAA-CTGTCTCT-AAATTGCA--CT-CTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATAATATTATGAAATTATCTAATTTGGTGTGATACTTGTTTGTTGTAAAATGTGTTCTTACTTATAAATCTTTATCTTTGGAACTAGTTATGCCACCGTGTGGCAGTAGTTGTTTGTTGGAAAATTTATATTTTTATGACAGATGTCCCTGTACCACATGAAATTACACAGCCATATATTATCAGTAGCTGGTTGGGTCATACTATGGTTTCACAATCTACAAATAGTAACAAAACCCATCGTATAACCTTTCAGTACCTATTTGAAAGCCTGCTTAAAAGAAAGAAGGATCATTCTTTTGGTCTTTTGGATCAAACAGAGTTGCAATCCATGCTATCAACCCATTGCTTTTAGTTTCAGCTGAAAAATTGACTTTTCTTGAGATTTCCGTTGCTCTTTAGTTATTCAGACACAGTATTTTGTTCCTTTGATCATGCTAGTTAGAAAGTTTGTTCTCTTATGCTTATGCAGATTGCTGCGATAAATTCTGTTTTTGGCATGTTTTGTTGTGAGAAAAGCCAGAAATTCGACAAGGCATAGTAGCTGAAAGTTTGTTAGGCAGGATGGATCATGACTCAACTTTCTATCTAGCTCTTTGTGCCGACTCAAAGTTTTTATTCCTTCTGCCGACTGTCCATGAAATCTACCATTACTGTTAGTCTATGCATCTAGCCAACATTCGAAAAGTTAACCTGACTCATTAATACAATAATTCTGGCAATTTGTGGCCAATGGCTGTAATCCTGGCTAAACTTTATATCATTCTGGCGCACTTTTCTGATAAGATCATGAAAACTTTAATGATCTGATTGAACCATGAAAATACTACTTTAATTTTGTATCATTGTGTAGTGTAGTCTTTATGTTTCTGAAAAACATGAACCATGGTTTTTACCCTTTTTGCTGCTTGTTTTTGCCTCCTGTGAACTTTTCTTTGGTTAAGGGACTGTTCCATCAATCCCATTTAATCTAATGTTATTAGAACATAAGAGGCTCTGATTTTGATTAGTCTCCATTGTTAACTCTTGTGCTTGCTTTACGCATATACATTCTGGAAGATAGCTCAAATAACTGGTTAGATCTTAATCTCTTTTTGCTGATTTTTTTTCTGGGACTTGAGCACTTTTGGTCATTTTCATCTTTGCATCATGCTTGCTATCAAGAGGGCCATTGAGATGATAAGATGCACTGAACAGAATTATTGATTATGCATATATGCCATAAGTTGCAATTTTGATACGCCTGTAGCTACCTTTGACAAGTGGTAAAGAACAATTTGATTGGCAATTTGGCTGGTTGTGTTCTGAAGTGGGATGTGACTGTTGCACCAGACCTGAGGATTTGGTAACGGTAAGCTATCTGGAGCCCCTCACTTGTTGGCTGGGATTGTTGCCGGTGTACTAGGTAATCAACACCAAGTAAGCTTCTGTCGTAGTCGTGTGACCTGGTTTGCTTGGCTTGCATACCAACCACTGGTTGTCTCTGCTGCTTAGAGGCTATTGTTGTGTTGAGTACGTTGTTGCAAATATTCGCTGGAATATATACTCCTAGGTAGTATGCATGCTTCATCTCCATCAGCAGGAGATTCTCATCTGCAAATGCAAAAGTAGTTCTTTCGGCAAAAAATATAGTGCCTCAGGTATCCACTCAGAATAGCAAGTGCTTGTCGTTCTCTTGCTAGAAATGTGCACTCTGAGGTCACATACTCACATTATGTACTCTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGCAAATACACAAAATTTAGCACAACCTTAGTTACATCTCAGCTGCAATATATAAAATTTACAGCAAACTACTACTACTGCGGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATGAACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACGGTCCATGACAACGACCATAGCCATGACGACCGCAACATCGACGCCTGGCCTGACGACGAGGGTGAACACGTCGTCGCCGAGACTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGTGATCCGCGCCGCCTCCTCGCCGTTGCTGCCGCGGATCTTGCAGCTCCTCATGGAGAAG-CAGCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGG---TTGGCTGTCACCACTTGTTCTTGTTGACATGAAAACTTCTGCTTCATCG-TTGCT-CTG-CAGAGCTGAGCTCTTCCTCATGGAGAAGACTTGCTGCTGTGACACTGAAGGAGAACTTGTGCTGTCCAAGCCTTCTTCCTCTTGTGCTCTGTAACAGTTCCATCGATTGTGCAGGCTGAGAATCTGTCACATTAGAGCAATGAAGATTAGTTTTTAATTTACGCTGATTATCTGTTTTTTACATTGCTTAGTTCAAAAATAGCGGCTGAAGAAAAGTTGACAACGAATCATGCAGATCATGTTTCTTTTATTACTTCTTTGTCACTTAACTGAAAATTGCAAGTTGCAAATGGAGAGATCTAATGTGAAGCACATAAAGGTT]
[+] EMBL CF316193 [GGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCAC TTACATTTGCTATTCA GGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCT AGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGA GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAA ]
[+] EMBL AU162346 [ TCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACNCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACNGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACNCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCACTTTACATTTGCTATTCAGGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTNAGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGAGGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGNTCATGAGGCCAATGAGTACCGTGGTNTCTTCTCTTAGATGTAAATTTTTGCGATAAAATTTCTTGTAAA CTATCTCTAAAATTGCAGGTTANTCTTCTCCAGAA ]
[+] EMBL C73650 [ GCGTGAAGTGAAACGGTTTGCTGATCTAAGTTCTAATGAGACTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCGTCTTCAC TTACATTTGCTATTCA GGATGGTCCAGAAGCTGGTCAAACTGTTTCACATGTCCACATCCATGTCATCCCT AGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGA GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGGAAGAAATGGCTCATGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGT ATTTTTGCGAT AACTTTCTTGTAAACCTGTCTCT AAATNGCA CT CTCTNCTC ]
[+] EMBL AK119337 [ TGATGTCAAAGAGA GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGGAAGAAATGGCTCATGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGT ATTTTTGCGAT AACTTTCTTGTAAA CTGTCTCT AAATTGCA CT CTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATAATATTATGAAATTATCTAATTTGGTGTGATACTTGTTTGTTGTAAAATGTGTTCTTACTTATAAATCTTTATCTTTGGAACTAGTTATGCCACCGTGTGGCAGTAGTTGTTTGTTGGAAAATTTATATTTTTATGACAGATGTCCCTGTACCACATGAAATTACACAGCCATATATTATCAGTAGCTGGTTGGGTCATACTATGGTTTCACAATCTACAAATAGTAACAAAACCCATCGTATAACCTTTCAGTACCTATTTGAAAGCCTGCTTAAAAGAAAGAAGGATCATTCTTTTGGTCTTTTGGATCAAACAGAGTTGCAATCCATGCTATCAACCCATTGCTTTTAGTTTCAGCTGAAAAATTGACTTTTCTTGAGATTTCCGTTGCTCTTTAGTTATTCAGACACAGTATTTTGTTCCTTTGATCATGCTAGTTAGAAAGTTTGTTCTCTTATGCTTATGCAGATTGCTGCGATAAATTCTGTTTTTGGCATGTTTTGTTGTGAGAAAAGCCAGAAATTCGACAAGGCATAGTAGCTGAAAGTTTGTTAGGCAGGATGGATCATGACTCAACTTTCTATCTAGCTCTTTGTGCCGACTCAAAGTTTTTATTCCTTCTGCCGACTGTCCATGAAATCTACCATTACTGTTAGTCTATGCATCTAGCCAACATTCGAAAAGTTAACCTGACTCATTAATACAATAATTCTGGCAATTTGTGGCCAATGGCTGTAATCCTGGCTAAACTTTATATCATTCTGGCGCACTTTTCTGATAAGATCATGAAAACTTTAATGATCTGATTGAACCATGAAAATACTACTTTAATTTTGTATCATTGTGTAGTGTAGTCTTTATGTTTCTGAAAAACATGAACCATGGTTTTTACCCTTTTTGCTGCTTGTTTTTGCCTCCTGTGAACTTTTCTTTGGTTAAGGGACTGTTCCATCAATCCCATTTAATCTAATGTTATTAGAACATAAGAGGCTCTGATTTTGATTAGTCTCCATTGTTAACTCTTGTGCTTGCTTTACGCATATACATTCTGGAAGATAGCTCAAATAACTGGTTAGATCTTAATCTCTTTTTGCTGATTTTTTTTCTGGGACTTGAGCACTTTTGGTCATTTTCATCTTTGCATCATGCTTGCTATCAAGAGGGCCATTGAGATGATAAGATGCACTGAACAGAATTATTGATTATGCATATATGCCATAAGTTGCAATTTTGATACGCCTGTAGCTACCTTTGACAAGTGGTAAAGAACAATTTGATTGGCAATTTGGCTGGTTGTGTTCTGAAGTGGGATGTGACTGTTGCACCAGACCTGAGGATTTGGTAACGGTAAGCTATCTGGAGCCCCTCACTTGTTGGCTGGGATTGTTGCCGGTGTACTAGGTAATCAACACCAAGTAAGCTTCTGTCGTAGTCGTGTGACCTGGTTTGCTTGGCTTGCATACCAACCACTGGTTGTCTCTGCTGCTTAGAGGCTATTGTTGTGTTGAGTACGTTGTTGCAAATATTCGCTGGAATATATACTCCTAGGTAGTATGCATGCTTCATCTCCATCAGCAGGAGATTCTCATCTGCAAATGCAAAAGTAGTTCTTTCGGCAAAAAATATAGTGCCTCAGGTATCCACTCAGAATAGCAAGTGCTTGTCGTTCTCTTGCTAGAAATGTGCACTCTGAGGTCACATACTCACATTATGTACTCTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGCAAATACACAAAATTTAGCACAACCTTAGTTACATCTCAGCTGCAATATATAAAATTTACAGCAAACTACTACTACTGCGGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATGAACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACGGTCCATGACAACGACCATAGCCATGACGACCGCAACATCGACGCCTGGCCTGACGACGAGGGTGAACACGTCGTCGCCGAGACTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGTGATCCGCGCCGCCTCCTCGCCGTTGCTGCCGCGGATCTTGCAGCTCCTCATGGAGAAG CAGCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGG TTGGCTGTCACCACTTGTTCTTGTTGACATGAAAACTTCTGCTTCATCG TTGCT CTG CAGAGCTGAGCTCTTCCTCATGGAGAAGACTTGCTGCTGTGACACTGAAGGAGAACTTGTGCTGTCCAAGCCTTCTTCCTCTTGTGCTCTGTAACAGTTCCATCGATTGTGCAGGCTGAGAATCTGTCACATTAGAGCAATGAAGATTAGTTTTTAATTTACGCTGATTATCTGTTTTTTACATTGCTTAGTTCAAAAATAGCGGCTGAAGAAAAGTTGACAACGAATCATGCAGATCATGTTTCTTTTATTACTTCTTTGTCACTTAACTGAAAATTGCAAGTTGCAAATGGAGAGATCTAATGTGAAGCACATAAAGGTT]
[-] EMBL BI812083 [ ttTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGGAAATACACAAAATTTAGCACAA CTTAGTTACATCTC GGTG AATATATAAAATTTACAG AAACTACTACTACTG GGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATGAACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACGGTCCATGACAACGACCATAGCCATGACGAACG GACATCGACGCCTGG CTGACGACGAGGGTGAACACGTCGTCGCCGAGGCTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGTGATCCG GCTGCCTCCTCGCCGTTGCTG CACGGATCTTGCAGCTCCTCATGGAGAAGCCAGCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGGTAATTGGCTGTCA CACTTGTTCTTGTCGACATGAAAACTTCTGGTTCGTCGCGTGCTCCTGAAAGAGCTGAGCTCTTCCct ]
consensusID : consensus_11571#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 863 fasta sequence
[GAGTAAAAGACGAGACGGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGGTTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTAGAAGGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGGTTTGTGGCATATTCCTCAATCGACCTCCTTTTATCCAATACTTGAACCCAATATTTACCACAAAATTCTTACTCAGTTGCTTTCTAATAGATTGATGTCAAAGAGAGGGAATTGAAGGAGAAACTTGATTTGGGCATAGAGAGAAAAGATAGAACCATGAAAAAAATGGGTCATGAGGCCAATGAGGACCGGGGTCCCTTTTTTTAAAAGTAATTTTTGCGATAAATTTTTTGTAAACTATTTTTAAATTGCAGTTACTTTTTTCCAGAAATTATTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF335997 [GAGTAAAAGACGAGACGGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGGTTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTAGAAGGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGGTTTGTGGCATATTCCTCAATCGACCTCCTTTTATCCAATACTTGAACCCAATATTTACCACAAAATTCTTACTCAGTTGCTTTCTAATAGATTGATGTCAAAGA ]
[-] EMBL CF335996 [ CACTTACATTTGCTATTCAGGATGGTCCCCAAGGTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTAAAAGGAAAGGAGATTTTTAGAAAAATGATGAGATATATGATGCGGTTTGTGGGATATTCCTCAATCGACCTCCTTTTATCCAAAACTTGAACCCAATATTTTCCCCAAAATTTTTACTCAGTTGCTTTTTAAAAGATTGATGTCAAAAAGAGGGAATTGAAGGAGAAACTTGATTTGGGCATAGAGAGAAAAGATAGAACCATGAAAAAAATGGGTCATGAGGCCAATGAGGACCGGGGTCCCTTTTTTTAAAAGTAATTTTTGCGATAAATTTTTTGTAAACTATTTTTAAATTGCAGTTACTTTTTTCCAGAAATTATTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11571#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 395 fasta sequence
[CTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCANCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGNTGAGATATATGATNCGATTGATGTCAAAGAGAGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGANCCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTGTAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAATTATCTAATTTGGTACGATAAAAAAAAAAAAAAAA]
[+] EMBL AU031331 [CTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCANCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGNTGAGATATATGATNCGATTGATGTCAAAGAGAGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGANCCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTGTAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAATTATCTAATTTGGTACGATAAAAAAAAAAAAAAAA]
[-] EMBL CF316194 [ AGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTGTAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTCTGTCATCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAAaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11571#0 ----------------GGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCG 44
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 GAGTAAAAGACGAGACGGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCG 60
consensus_11571#0 CCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACC 104
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 CCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACC 120
consensus_11571#0 CTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCG 164
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 CTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCG 180
consensus_11571#0 CCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAG 224
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 CCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAG 240
consensus_11571#0 GTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGT 284
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 GTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGT 300
consensus_11571#0 CATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAG 344
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 CATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAG 360
consensus_11571#0 ATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAA 404
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 GTTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAA 420
consensus_11571#0 GCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACAT 464
consensus_11571#2 ---------CTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACAT 51
consensus_11571#1 GCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACAT 480
***************************************************
consensus_11571#0 GTCCACATCCATGTCATCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATAT 524
consensus_11571#2 GTCCACATCCATGTCANCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGNTGAGATATAT 111
consensus_11571#1 GTCCACATCCATGTCATCCCTAGAAGGAAAGGAGATTTTGAGAAAAATGATGAGATATAT 540
**************** ******** *********************** **********
consensus_11571#0 GATGCG------------------------------------------------------ 530
consensus_11571#2 GATNCG------------------------------------------------------ 117
consensus_11571#1 GATGCGGTTTGTGGCATATTCCTCAATCGACCTCCTTTTATCCAATACTTGAACCCAATA 600
*** **
consensus_11571#0 -------------------------------------ATTGATGTCAAAGAGAGGGAATT 553
consensus_11571#2 -------------------------------------ATTGATGTCAAAGAGAGGGAATT 140
consensus_11571#1 TTTACCACAAAATTCTTACTCAGTTGCTTTCTAATAGATTGATGTCAAAGAGAGGGAATT 660
***********************
consensus_11571#0 GAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGCTCA 613
consensus_11571#2 GAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGANCCATGAAAGAAATGGCTCA 200
consensus_11571#1 GAAGGAGAAACTTGATTTGGGCATAGAGAGAAAAGATAGAACCATGAAAAAAATGGGTCA 720
**************** *** ******************* ******** ****** ***
consensus_11571#0 TGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGTA-TTTTTGCGATAACTTTCTTG 672
consensus_11571#2 TGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTG 260
consensus_11571#1 TGAGGCCAATGAGGACCGGGGTCCCTTTTTTTAAAAGTAATTTTTGCGATAAATTTTTTG 780
************* **** * ** *** * *** * *** ************ *** ***
consensus_11571#0 TAAACTGTCTCTAAATTGCACT--CTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCA 730
consensus_11571#2 TAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCA 320
consensus_11571#1 TAAACTATTTTTAAATTGCAGTTACTTTTTTCCAGAAATTATTTTTGTAAAAAAAAAAAA 840
****** * * ********* * ** ** ******************** *
consensus_11571#0 TCCATCATGGGAATTCAAGTCTTCGAATAATATTATGAAATTATCTAATTTGGTGTGATA 790
consensus_11571#2 TCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAATTATCTAATTTGGTACGATA 380
consensus_11571#1 AAAAAAAAAAAAAAAAAAAAAAA------------------------------------- 863
* * ** **
consensus_11571#0 CTTGTTTGTTGTAAAATGTGTTCTTACTTATAAATCTTTATCTTTGGAACTAGTTATGCC 850
consensus_11571#2 AAAAAAAAAAAAAAA--------------------------------------------- 395
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 ACCGTGTGGCAGTAGTTGTTTGTTGGAAAATTTATATTTTTATGACAGATGTCCCTGTAC 910
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CACATGAAATTACACAGCCATATATTATCAGTAGCTGGTTGGGTCATACTATGGTTTCAC 970
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 AATCTACAAATAGTAACAAAACCCATCGTATAACCTTTCAGTACCTATTTGAAAGCCTGC 1030
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TTAAAAGAAAGAAGGATCATTCTTTTGGTCTTTTGGATCAAACAGAGTTGCAATCCATGC 1090
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TATCAACCCATTGCTTTTAGTTTCAGCTGAAAAATTGACTTTTCTTGAGATTTCCGTTGC 1150
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TCTTTAGTTATTCAGACACAGTATTTTGTTCCTTTGATCATGCTAGTTAGAAAGTTTGTT 1210
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CTCTTATGCTTATGCAGATTGCTGCGATAAATTCTGTTTTTGGCATGTTTTGTTGTGAGA 1270
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 AAAGCCAGAAATTCGACAAGGCATAGTAGCTGAAAGTTTGTTAGGCAGGATGGATCATGA 1330
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CTCAACTTTCTATCTAGCTCTTTGTGCCGACTCAAAGTTTTTATTCCTTCTGCCGACTGT 1390
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CCATGAAATCTACCATTACTGTTAGTCTATGCATCTAGCCAACATTCGAAAAGTTAACCT 1450
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GACTCATTAATACAATAATTCTGGCAATTTGTGGCCAATGGCTGTAATCCTGGCTAAACT 1510
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TTATATCATTCTGGCGCACTTTTCTGATAAGATCATGAAAACTTTAATGATCTGATTGAA 1570
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CCATGAAAATACTACTTTAATTTTGTATCATTGTGTAGTGTAGTCTTTATGTTTCTGAAA 1630
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 AACATGAACCATGGTTTTTACCCTTTTTGCTGCTTGTTTTTGCCTCCTGTGAACTTTTCT 1690
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TTGGTTAAGGGACTGTTCCATCAATCCCATTTAATCTAATGTTATTAGAACATAAGAGGC 1750
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TCTGATTTTGATTAGTCTCCATTGTTAACTCTTGTGCTTGCTTTACGCATATACATTCTG 1810
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GAAGATAGCTCAAATAACTGGTTAGATCTTAATCTCTTTTTGCTGATTTTTTTTCTGGGA 1870
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CTTGAGCACTTTTGGTCATTTTCATCTTTGCATCATGCTTGCTATCAAGAGGGCCATTGA 1930
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GATGATAAGATGCACTGAACAGAATTATTGATTATGCATATATGCCATAAGTTGCAATTT 1990
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TGATACGCCTGTAGCTACCTTTGACAAGTGGTAAAGAACAATTTGATTGGCAATTTGGCT 2050
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GGTTGTGTTCTGAAGTGGGATGTGACTGTTGCACCAGACCTGAGGATTTGGTAACGGTAA 2110
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GCTATCTGGAGCCCCTCACTTGTTGGCTGGGATTGTTGCCGGTGTACTAGGTAATCAACA 2170
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CCAAGTAAGCTTCTGTCGTAGTCGTGTGACCTGGTTTGCTTGGCTTGCATACCAACCACT 2230
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GGTTGTCTCTGCTGCTTAGAGGCTATTGTTGTGTTGAGTACGTTGTTGCAAATATTCGCT 2290
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GGAATATATACTCCTAGGTAGTATGCATGCTTCATCTCCATCAGCAGGAGATTCTCATCT 2350
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GCAAATGCAAAAGTAGTTCTTTCGGCAAAAAATATAGTGCCTCAGGTATCCACTCAGAAT 2410
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 AGCAAGTGCTTGTCGTTCTCTTGCTAGAAATGTGCACTCTGAGGTCACATACTCACATTA 2470
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TGTACTCTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGCAAAT 2530
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 ACACAAAATTTAGCACAACCTTAGTTACATCTCAGCTGCAATATATAAAATTTACAGCAA 2590
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 ACTACTACTACTGCGGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATG 2650
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 AACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACG 2710
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GTCCATGACAACGACCATAGCCATGACGACCGCAACATCGACGCCTGGCCTGACGACGAG 2770
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GGTGAACACGTCGTCGCCGAGACTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGT 2830
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GATCCGCGCCGCCTCCTCGCCGTTGCTGCCGCGGATCTTGCAGCTCCTCATGGAGAAGCA 2890
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGGTTGGCTGTCACCACTTGTTCT 2950
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TGTTGACATGAAAACTTCTGCTTCATCGTTGCTCTGCAGAGCTGAGCTCTTCCTCATGGA 3010
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GAAGACTTGCTGCTGTGACACTGAAGGAGAACTTGTGCTGTCCAAGCCTTCTTCCTCTTG 3070
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 TGCTCTGTAACAGTTCCATCGATTGTGCAGGCTGAGAATCTGTCACATTAGAGCAATGAA 3130
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GATTAGTTTTTAATTTACGCTGATTATCTGTTTTTTACATTGCTTAGTTCAAAAATAGCG 3190
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 GCTGAAGAAAAGTTGACAACGAATCATGCAGATCATGTTTCTTTTATTACTTCTTTGTCA 3250
consensus_11571#2 ------------------------------------------------------------
consensus_11571#1 ------------------------------------------------------------
consensus_11571#0 CTTAACTGAAAATTGCAAGTTGCAAATGGAGAGATCTAATGTGAAGCACATAAAGGTT 3308
consensus_11571#2 ----------------------------------------------------------
consensus_11571#1 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||