cluster # 11575

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Oryza sativa
cluster # 11575 cluster # 11575 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11575#0 length = 1399 sequences # 6

consensus_11575#1 length = 724 sequences # 2
consensus_11575#2 length = 577 sequences # 1

consensusID : consensus_11575#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1399
fasta sequence

                              [CGACCCAACTCTGGTCTTAACTCCGACGCCCGAACTCCTAAACCCACCCCGTGCCCCCGCCGTCGTCGCCGCCGCCGCCGCAGCAGCAGCCTTCCTCCAAATCCGCGCGCCTCCTCCGGCCATGGCCACAGCCAGCGACGGCAGCGGCAGCGGCGGCGAGCAGCGGCGCCTCCTCTCCATCCCCAAGGAGGGCGAGCGCATCATCGCGCCGACGCGCCGCCCCGACGGCACGCTCCGCAAGGCCATCCGCATCCGCGCCGGCTACGTCCCCCAGGAGGAGGTCGCCATCTACCAGTCCAAGGGCGCCCAGATGAGGAAGTCGGGGCCCGACGTGCCGCCGGGCTACGACCCGGCGCTCGATGCTAAGCCCAAGACGAAGGCGGCCAAGCGGAACGAGCGGCGTAAGGAGAAACGGCGGCAGCAGGCCAGTACAACAAATGATAAAGGAAAGGGCTTGCATATAGAGGATGATG-CAGGAGAAACTGACAATCCGAAGGATGCAGTGGACAGTGTAACAAAGCAGATAAGTGGCATTGCTATTTCTGAATCTCTGGTTGTCGCAACCTCCTCCACTGATGCTACCGACAACTCAAAATCGGAGTCATCTGCTCCAGACATAGATAAGAAAATTCGAGCACTGAAGAAGAAGATACGCTTAGCAGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGAAGATAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGAGTGGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTAATCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTCGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTCTTGACACTGGATTTACTTCTCTGCTGATCCAGTAATAACCGTACAAATTTAAAGGCCACAGGCCTCATTGCATCGACAAAGATGACAGGCGAGTCCAATATCCTGATCCATCTTTGAACATTCAGCTTATATGGTTATCGTGGTTTGCAAAGCAAGAGGAAACTGGCTTGTTTTGGGTTATATAGCTAGTGTGGCAAGTCTGCCTGTTTGGTTCTTTGTACTTTTGATGAAAAGCTTAAGTTGGAAATGCATTTTATGCTGTGAAAAAAAAAAAAA]

[+] EMBL AK067490             [CGACCCAACTCTGGTCTTAACTCCGACGCCCGAACTCCTAAACCCACCCCGTGCCCCCGCCGTCGTCGCCGCCGCCGCCGCAGCAGCAGCCTTCCTCCAAATCCGCGCGCCTCCTCCGGCCATGGCCACAGCCAGCGACGGCAGCGGCAGCGGCGGCGAGCAGCGGCGCCTCCTCTCCATCCCCAAGGAGGGCGAGCGCATCATCGCGCCGACGCGCCGCCCCGACGGCACGCTCCGCAAGGCCATCCGCATCCGCGCCGGCTACGTCCCCCAGGAGGAGGTCGCCATCTACCAGTCCAAGGGCGCCCAGATGAGGAAGTCGGGGCCCGACGTGCCGCCGGGCTACGACCCGGCGCTCGATGCTAAGCCCAAGACGAAGGCGGCCAAGCGGAACGAGCGGCGTAAGGAGAAACGGCGGCAGCAGGCCAGTACAACAAATGATAAAGGAAAGGGCTTGCATATAGAGGATGATG CAGGAGAAACTGACAATCCGAAGGATGCAGTGGACAGTGTAACAAAGCAGATAAGTGGCATTGCTATTTCTGAATCTCTGGTTGTCGCAACCTCCTCCACTGATGCTACCGACAACTCAAAATCGGAGTCATCTGCTCCAGACATAGATAAGAAAATTCGAGCACTGAAGAAGAAGATACGCTTAGCAGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGAAGATAGAAGGTTGGAAAGAGGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGAGTAGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTATTCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTCGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTGCCATTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTCTTGACACTGGATTTACTTCTCTGCTGATCCAGTAATAACCGTACAAATTTAAAGGCCACAGGCC                                                                                                                                                                                                                    ]
[+] EMBL CA997897             [                                                                                            TCCTCCAAATCCGCGCGCCTCCTCCGGCCATGGCCACAGCCAGCGACGGCAGCGGCAGCGGCGGCGAGCAGCGGCGCCTCCTCTCCATCCCCAAGGAGGGCGAGCGCATCATCGCGCCGACGCGCCGCCCCGACGGCACGCTCCGCAAGGCCATCCGCATCCGCGCCGGCTACGTCCCCCAGGAGGAGGTCGCCATCTACCAGTCCAAGGGCGCCCAGATGAGGAAGTCGGGGCCCGACGTGCCGCCGGGCTACNACCCGGCGCTCGATGCTAAGCCCAAGACGAAGGCGGCCAAGCGGAACGAGCGGCGTAAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA997991             [                                                                                            TCCTCCAAATCCGCGCGCCTCCTCCGGCCATGGCCACAGCCAGCGACGGCAGCGGCAGCGGCGGCGAGCAGCGGCGCCTCCTCTCCATCCCCAAGGAGGGCGAGCGCATCATCGCGCCGACGCGCCGCCCCGACGGCACGCTCCGCAAGGCCATCCGGATGCGCGCCGGCTACGTCCCCCAGGAGGAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB685524             [                                                                                                           cctttaagCCGGCCATGGCCACAGCCAGCGACGGCAGCGGCAGCGGCGGCGAGCAGCGGCGCCTCCTCTCCATCCCCAAGGAGGGCGAGCGCATCATCGCGCCGACGCGCCGCCCCGACGGCACGCTCCGCAAGGCCATCCGCATCCGCGCCGGCTACGTCCCCCAGGAGGAGGTCGCCATCTACCAGTCCAAGGGCGCCCAGATGAGGAAGTCGGGGCCCGACGTGCCGCCGGGCTACGACCCGGCGCTCGATGCTAAGCCCAAGACGAAGGCGGCCAAGCGGAACGAGCGGCGTAAGGAGAAACGGCAGCAGCAGGCCAGTACAACAAATGATAAAGGAAAGGGCTTGCATATAGAGGATGATGCCAGGACAAACTGACAATCCGAAGGATGCAGTGGACAGTGTAACAAAGCAGATAAGTGGCATTGCTATTTCTGAATCTCTGGTTGTCGCAACCTCCTCCACTGATGCTACCGACAACTCAAAATCGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CA761763             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAGAAAATGAAGNAGATAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGAGTGGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTAATCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTTGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTCTTGACACTGGATTTACTTCTTTGCTGATCCAGTAATAACCGTACAAATTTAAAGGCCACAGGCCTCATTGCATCGACAAAGATGACAGGCGAGTCCAATATCCTGATCCATCTTTGAACATTCAGCTTATATGGTTATCGTGGTTTGCAAAGCAAGAGGAAACTGGCTTGTTTTGGGTTATATAGCTAGTGTGGCAAGTCTGCCTGTTTGGTTCTTTGTACTTTTGATGAAAAGCTTAAGTTGGAAATGCATTTTATGCTGTGAAAAAAAAAAAAA]
[-] EMBL CB635911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGATAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGAGTGGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTAATCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTCGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCATTGTAGCTTTGTATATTATGCCAACATT                                                                                                                                                                                                                                                                                               ]




>consensus_11575#0
CGACCCAACTCTGGTCTTAACTCCGACGCCCGAACTCCTAAACCCACCCCGTGCCCCCGC
CGTCGTCGCCGCCGCCGCCGCAGCAGCAGCCTTCCTCCAAATCCGCGCGCCTCCTCCGGC
CATGGCCACAGCCAGCGACGGCAGCGGCAGCGGCGGCGAGCAGCGGCGCCTCCTCTCCAT
CCCCAAGGAGGGCGAGCGCATCATCGCGCCGACGCGCCGCCCCGACGGCACGCTCCGCAA
GGCCATCCGCATCCGCGCCGGCTACGTCCCCCAGGAGGAGGTCGCCATCTACCAGTCCAA
GGGCGCCCAGATGAGGAAGTCGGGGCCCGACGTGCCGCCGGGCTACGACCCGGCGCTCGA
TGCTAAGCCCAAGACGAAGGCGGCCAAGCGGAACGAGCGGCGTAAGGAGAAACGGCGGCA
GCAGGCCAGTACAACAAATGATAAAGGAAAGGGCTTGCATATAGAGGATGATGCAGGAGA
AACTGACAATCCGAAGGATGCAGTGGACAGTGTAACAAAGCAGATAAGTGGCATTGCTAT
TTCTGAATCTCTGGTTGTCGCAACCTCCTCCACTGATGCTACCGACAACTCAAAATCGGA
GTCATCTGCTCCAGACATAGATAAGAAAATTCGAGCACTGAAGAAGAAGATACGCTTAGC
AGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAA
GAAGATAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGC
TTCCTAGACAATGTCGACCTCAGCACTGATGTTGAGTGGAGCCATCATATATCGAATGCC
TGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTAA
TCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGC
TTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAA
TCTGTTTGTCGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGT
ACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTCTTGACACTGGATTTACT
TCTCTGCTGATCCAGTAATAACCGTACAAATTTAAAGGCCACAGGCCTCATTGCATCGAC
AAAGATGACAGGCGAGTCCAATATCCTGATCCATCTTTGAACATTCAGCTTATATGGTTA
TCGTGGTTTGCAAAGCAAGAGGAAACTGGCTTGTTTTGGGTTATATAGCTAGTGTGGCAA
GTCTGCCTGTTTGGTTCTTTGTACTTTTGATGAAAAGCTTAAGTTGGAAATGCATTTTAT
GCTGTGAAAAAAAAAAAAA

consensusID : consensus_11575#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 724
fasta sequence

                              [TAATTTTATAAGCACTTGTAATCAGTTTTTCTTCTTGTAAGTTTAACTTATTCATGGTAACTGCCAAGAATCTAATGTAGTAGTAACCGATCATTGATTTTATGGTTCTTAGGACATCTCAGGTATTCAGTCCATGCTTTCAACCTCTAGGAGCAGGCGAGCAGCCATAGTATATGTTAACAGTGCTATTTTGATCTGCCACCATGGGACTAAATTAGATCTGACCTGGATAAATTTGTCTTGATTTATCACAGATACGCTTAGCAGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGAAGATAGAAGGTTGGAAAGAGGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGGGTAGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTATTCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTCATAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATT]

[-] EMBL CB964898             [TAATTTTATAAGCACTTGTAATCAGTTTTTCTTCTTGTAAGTTTAACTTATTCATGGTAACTGCCAAGAATCTAATGTAGTAGTAACCGATCATTGATTTTATGGTTCTTAGGACATCTCAGGTATTCAGTCCATGCTTTCAACCTCTAGGAGCAGGCGAGCAGCCATAGTATATGTTAACAGTGCTATTTTGATCTGCCACCATGGGACTAAATTAGATCTGACCTGGATAAATTTGTCTTGATTTATCACAGATACGCTTAGCAGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGAAGATAGAAGGTTGGAAAGAGGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGGGTAGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTATTCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTCATAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATT]
[-] EMBL BI306072             [            CACTTGTAATCAGTTTTTCTTCTTGTAAGTTTAACTTATTCATGGTAACTGCCAAGAATCTAATGTAGTAGTAACCAATCATTGATTTTAT GTTCTTAGGACATCTCAGGTATTCAGTCCATGCTTTCAACCTCTAGGAGCAGGCGAGCAGCCATAGTATATGTTAACAGTGCTATTTTGATCTGCCACCATGGGACTAAATTAGATCTGACCTGGATAAATTTGTCTTGATTTATCACAGATACGCTTAGCAGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGAAGATAGAAGGTTGGAAAGAGGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGGGTAGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTATTCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTCATAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATT]




>consensus_11575#1
TAATTTTATAAGCACTTGTAATCAGTTTTTCTTCTTGTAAGTTTAACTTATTCATGGTAA
CTGCCAAGAATCTAATGTAGTAGTAACCGATCATTGATTTTATGGTTCTTAGGACATCTC
AGGTATTCAGTCCATGCTTTCAACCTCTAGGAGCAGGCGAGCAGCCATAGTATATGTTAA
CAGTGCTATTTTGATCTGCCACCATGGGACTAAATTAGATCTGACCTGGATAAATTTGTC
TTGATTTATCACAGATACGCTTAGCAGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGA
AGCCTGAACAACTCGAGAAAATGAAGAAGATAGAAGGTTGGAAAGAGGAGCTGAAGCTTT
TGGAGAATAAGAGCTCTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCACTGATGTTGG
GTAGAGCCATCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAA
TCAGTCATTGTCTTGCTTGTCTTATTCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGAT
GTGGGGTTTCACACAGAGTGGTAGCTTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTC
CAGTTCGAAGATTCGTATTGCAAAATCTGTTTGTCATAGACATCGTGCAATGAGACAACC
GATTGGAGTTGGGGTATGTGACGGTACCATTGTAGCTTTGTATATTATGCCAACATTGGC
AATT

consensusID : consensus_11575#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 577
fasta sequence

                              [AGAGGNCGAGCCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGAAGGTAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTTTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCCCTGATGTTGAGTGGAGCCCTCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTTTTAATCCCCTCGGCCTTTGGAAAAAGCAATCCAATTGATGTGGGGTTTCCCACAGAGTGGTAGCTTTTTGCCCCAAATTGTTGTTTCGTGTACGTCCTCCAGTTTGAAGATTTGTATTGCAAAATCTGTTTGTTGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCCTTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTTTTGACCCTGGATTTACTTTTTTGCTGATCCCATAATAACCGTACAAATTTAAAGGCCCCAGGCCTCATTGCATCGGCAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763287             [AGAGGNCGAGCCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGAAGGTAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTTTCCTGCTGCTTCCTAGACAATGTCGACCTCAGCCCTGATGTTGAGTGGAGCCCTCATATATCGAATGCCTGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTTTTAATCCCCTCGGCCTTTGGAAAAAGCAATCCAATTGATGTGGGGTTTCCCACAGAGTGGTAGCTTTTTGCCCCAAATTGTTGTTTCGTGTACGTCCTCCAGTTTGAAGATTTGTATTGCAAAATCTGTTTGTTGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTACCCTTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTTTTGACCCTGGATTTACTTTTTTGCTGATCCCATAATAACCGTACAAATTTAAAGGCCCCAGGCCTCATTGCATCGGCAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11575#2
AGAGGNCGAGCCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAAGA
AGGTAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTTTCCTGCTGCTT
CCTAGACAATGTCGACCTCAGCCCTGATGTTGAGTGGAGCCCTCATATATCGAATGCCTG
CCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTTTTAATC
CCCTCGGCCTTTGGAAAAAGCAATCCAATTGATGTGGGGTTTCCCACAGAGTGGTAGCTT
TTTGCCCCAAATTGTTGTTTCGTGTACGTCCTCCAGTTTGAAGATTTGTATTGCAAAATC
TGTTTGTTGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGTAC
CCTTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTTTTGACCCTGGATTTACTTT
TTTGCTGATCCCATAATAACCGTACAAATTTAAAGGCCCCAGGCCTCATTGCATCGGCAA
AAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11575#0      CGACCCAACTCTGGTCTTAACTCCGACGCCCGAACTCCTAAACCCACCCCGTGCCCCCGC 60
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      CGTCGTCGCCGCCGCCGCCGCAGCAGCAGCCTTCCTCCAAATCCGCGCGCCTCCTCCGGC 120
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      CATGGCCACAGCCAGCGACGGCAGCGGCAGCGGCGGCGAGCAGCGGCGCCTCCTCTCCAT 180
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      CCCCAAGGAGGGCGAGCGCATCATCGCGCCGACGCGCCGCCCCGACGGCACGCTCCGCAA 240
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      GGCCATCCGCATCCGCGCCGGCTACGTCCCCCAGGAGGAGGTCGCCATCTACCAGTCCAA 300
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      GGGCGCCCAGATGAGGAAGTCGGGGCCCGACGTGCCGCCGGGCTACGACCCGGCGCTCGA 360
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      TGCTAAGCCCAAGACGAAGGCGGCCAAGCGGAACGAGCGGCGTAAGGAGAAACGGCGGCA 420
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------TAATTTTATAAGCACTTGTAATCAGTTTTTCTTCTT 36
                                                                                   

consensus_11575#0      GCAGGCCAGTACAACAAATGATAAAGGAAAGGGCTTGCATATAGAGGATGATGCAGGAGA 480
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      GTAAGTTTAACTTATTCATGGTAACTGCCAAGAATCTAATGTAGTAGTAACCGATCATTG 96
                                                                                   

consensus_11575#0      AACTGACAATCCGAAGGATGCAGTGGACAGTGTAACAAAGCAGATAAGTGGCATTGCTAT 540
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ATTTTATGGTTCTTAGGACATCTCAGGTATTCAGTCCATGCTTTCAACCTCTAGGAGCAG 156
                                                                                   

consensus_11575#0      TTCTGAATCTCTGGTTGTCGCAACCTCCTCCACTGATGCTACCGACAACTCAAAATCGGA 600
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      GCGAGCAGCCATAGTATATGTTAACAGTGCTATT-------TTGATCTGCCACCATGGGA 209
                                                                                   

consensus_11575#0      GTCATCTGCTCCAGACATAGATAAGAAAATTCGAGCACTGAAGAAGAAGATACGCTTAGC 660
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      CTAAATTAGATCTGACCTGGATA----AATTTGTCTTGATTTATCACAGATACGCTTAGC 265
                                                                                   

consensus_11575#0      AGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAA 720
consensus_11575#2      -AGAGGNCGAGC-CAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAA 58
consensus_11575#1      AGAAGCGCAAGTGCAAGGAGATCCAGAAAATTTGAAGCCTGAACAACTCGAGAAAATGAA 325
                          **  * **  ***********************************************

consensus_11575#0      GAAGATAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGC 780
consensus_11575#2      GAAGGTAGAAGGTTGGAAAGAAGAGCTGAAGCTTTTGGAGAATAAGAGCTTTCCTGCTGC 118
consensus_11575#1      GAAGATAGAAGGTTGGAAAGAGGAGCTGAAGCTTTTGGAGAATAAGAGCTCTCCTGCTGC 385
                       **** **************** **************************** *********

consensus_11575#0      TTCCTAGACAATGTCGACCTCAGCACTGATGTTGAGTGGAGCCATCATATATCGAATGCC 840
consensus_11575#2      TTCCTAGACAATGTCGACCTCAGCCCTGATGTTGAGTGGAGCCCTCATATATCGAATGCC 178
consensus_11575#1      TTCCTAGACAATGTCGACCTCAGCACTGATGTTGGGTAGAGCCATCATATATCGAATGCC 445
                       ************************ ********* ** ***** ****************

consensus_11575#0      TGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTAA 900
consensus_11575#2      TGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTTTTAA 238
consensus_11575#1      TGCCTGCTGTGATGTTTTGCTGATCCAAAGTCCAATCAGTCATTGTCTTGCTTGTCTTAT 505
                       ******************************************************* *** 

consensus_11575#0      TCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGC 960
consensus_11575#2      TCCCCTCGGCCTTTGGAAAAAGCAATCCAATTGATGTGGGGTTTCCCACAGAGTGGTAGC 298
consensus_11575#1      TCCCCTCGGCCTCTGGAAAAAGCAATCCAATTGATGTGGGGTTTCACACAGAGTGGTAGC 565
                       ************ ******************************** **************

consensus_11575#0      TTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAA 1020
consensus_11575#2      TTTTTGCCCCAAATTGTTGTTTCGTGTACGTCCTCCAGTTTGAAGATTTGTATTGCAAAA 358
consensus_11575#1      TTTTTGCCACAAATTGTTGTCTCGTGTACGTCCTCCAGTTCGAAGATTCGTATTGCAAAA 625
                       ******** *********** ******************* ******* ***********

consensus_11575#0      TCTGTTTGTCGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGT 1080
consensus_11575#2      TCTGTTTGTTGTAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGT 418
consensus_11575#1      TCTGTTTGTCATAGACATCGTGCAATGAGACAACCGATTGGAGTTGGGGTATGTGACGGT 685
                       *********  *************************************************

consensus_11575#0      ACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTCTTGACACTGGATTTACT 1140
consensus_11575#2      ACCCTTGTAGCTTTGTATATTATGCCAACATTGGCAATTCCTTTTGACCCTGGATTTACT 478
consensus_11575#1      ACCATTGTAGCTTTGTATATTATGCCAACATTGGCAATT--------------------- 724
                       *** ***********************************                     

consensus_11575#0      TCTCTGCTGATCCAGTAATAACCGTACAAATTTAAAGGCCACAGGCCTCATTGCATCGAC 1200
consensus_11575#2      TTTTTGCTGATCCCATAATAACCGTACAAATTTAAAGGCCCCAGGCCTCATTGCATCGGC 538
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      AAAGATGACAGGCGAGTCCAATATCCTGATCCATCTTTGAACATTCAGCTTATATGGTTA 1260
consensus_11575#2      AAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAA----AAAAA----------------- 577
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      TCGTGGTTTGCAAAGCAAGAGGAAACTGGCTTGTTTTGGGTTATATAGCTAGTGTGGCAA 1320
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      GTCTGCCTGTTTGGTTCTTTGTACTTTTGATGAAAAGCTTAAGTTGGAAATGCATTTTAT 1380
consensus_11575#2      ------------------------------------------------------------
consensus_11575#1      ------------------------------------------------------------
                                                                                   

consensus_11575#0      GCTGTGAAAAAAAAAAAAA 1399
consensus_11575#2      -------------------
consensus_11575#1      -------------------