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Oryza sativa
cluster # 11584 cluster # 11584       Sequences # 9       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11584#0 length = 1622 sequences # 7  
 consensus_11584#1 length = 742 sequences # 1  
consensus_11584#2 length = 420 sequences # 1  
consensusID : consensus_11584#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1622
fasta sequence 
                              [TAGAAAAAAAAAAGGTTGGGAAATGAAGTCCACCACCCACCTACTCGCCGGCGGCGGTGGCGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGCGCCGACGCTGGCCATGGAAGTAGGGGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGGCGGCGCCGGAGCCGGAGGAGGAGACGGGGATGCCCGCGACGCGCTCCTCCGGTTGGTTGCTCTCGGCGACCGCATGGCCGCCGTCCGCCGCCGCATCGCCGCATCTATATCCGGAGAATCCGGGCCCCTCTCTTCCTCCGACATCCACTCCGTCTCCTCCGAGATCTCCTCCGCTGCCCACCTCGTCGTCCTCAACGCCGCCTCCCTCCTCTCTTCCACCGTCGCCTCCCTCCCGGCTCCACCTCCGCCTCCGGCTACTACCGTCCAGGAGCTCCCCCCCGTGGTGGTCTCCGTGCCTCAGGAACCCCCGCAAGAAGCAGCCAAGGGCGACGGCGACTACGACGTCGTCGAGCTCGACGCCTCCGAGCTTCTCGCGGAGCACGTCCACTTCTGCGACATCTGCGGCAAGGGGTTCCGCCGCGACGCCAACCTCCGGATGCACATGCGCGCCCACGGCGACCGCTTCAAGACCCTGGACGCGCTCTCCAGGCCCGGCCAGCCGAAGCCGCCTGCCGGCCGGGAGGTGCGGTTCTCGTGCCCCTACGCCGGCTGCAACCGGAACCGCGCGCACCGCCGCTTCCGGCCGCTCAAGTCGGCCGTG-TGCGCGCGCAACCACTTCCGGCGGAGCCACTGCCCCAAGCTCTACGCCTGCGAGCGCTGCGGCGGCAAGAAGCGCTTCGCCGTCCTCGCCGACCTCCGGAGCCACCTCCGCCACTGCGGCGAGGAGGCGCAGTGGCGCTGCTCCTGCGGCACCACCTTCTCCCGCAAGGACAAGCTGTTCGGCCATCTCGCTCTCTTCGAAGGCCACACGCCGGCGATCGCCGAGCCGAACAAGGGTGTGGCGACAGCGGCTGCAGAGGCATCGATTTCTATGATGGAGGAAGGAGGAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGGCGCTGTTGCCCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAAGAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGACCTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATGATGAAAGATATTAACCGTTGGTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGATTCAGCTTTCTACGGTAGTGTAGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAACATCAGCACCCAACACTGTAACGAACACCATACATGTGAGATCTTACAATTGATCGAGGTGAAGTCACACTGAA]

[+] EMBL AK071320             [TAGAAAAAAAAAAGGTTGGGAAATGAAGTCCACCACCCACCTACTCGCCGGCGGCGGTGGCGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGCGCCGACGCTGGCCATGGAAGTAGGGGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGGCGGCGCCGGAGCCGGAGGGGGAGACGGGGATGCCCGCGACGCGCTCCTCCGGTTGGTTGCTCTCGGCGACCGCATGGCCGCCGTCCGCCGCCGCATCGCCGCATCTATATCCGGAGAATCCGGGCCCCTCTCTTCCTCCGACATCCACTCCGTCTCCTCCGAGATCTCCTCCGCTGCCCACCTCGTCGTCCTCAACGCCGCCTCCCTCCTCTCTTCCACCGTCGCCTCCCTCCCGGCTCCACCTCCGCCTCCGGCTACTACCGTCCAGGAGCTCCCCCCCGTGGTGGTCTCCGTGCCTCAGGAACCCCCGCAAGAAGCAGCCAAGGGCGACGGCGACTACGACGTCGTCGAGCTCGACGCCTCCGAGCTTCTCGCGGAGCACGTCCACTTCTGCGACATCTGCGGCAAGGGGTTCCGCCGCGACGCCAACCTCCGGATGCACATGCGCGCCCACGGCGACCGCTTCAAGACCCTGGACGCGCTCTCCAGGCCCGGCCAGCCGAAGCCGCCTGCCGGCCGGGAGGTGCGGTTCTCGTGCCCCTACGCCGGCTGCAACCGGAACCGCGCGCACCGCCGCTTCCGGCCGCTCAAGTCGGCCGTG TGCGCGCGCAACCACTTCCGGCGGAGCCACTGCCCCAAGCTCTACGCCTGCGAGCGCTGCGGCGGCAAGAAGCGCTTCGCCGTCCTCGCCGACCTCCGGAGCCACCTCCGCCACTGCGGCGAGGAGGCGCAGTGGCGCTGCTCCTGCGGCACCACCTTCTCCCGCAAGGACAAGCTGTTCGGCCATCTCGCTCTCTTCGAAGGCCACACGCCGGCGATCGCCGAGCCGAACAAGGGTGTGGCGACAGCGGCTGCAGAGGCATCGATTTCTATGATGGAGGAAGGAGGAGTTGAAGCGAATTGTGATCGAGAGGAGGGTGAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGGCGCTGTTGCCCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAAGAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGACCTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATGATGAAAGATATTAACCGTTGGTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGATTCAGCTTTCTACGGTAGTGTAGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAACATCAGCACCCAACACTGTAACGAACACCATACATGTGAGATCTTACAATTGATCGAGGTGAAGTCACACTGAA]
[+] EMBL C73944               [             cngTGNGAAATGAAGTCCACCACCCACCTACTCGCCGGCGGNGTCNGCGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGNGCCGACGNTGGCCATGGAAGTAGGGGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGGCGGCGCCGGAGCCGGAGGAGGAGACGGGGATNCCCGCGACG GCTCCTNCGGTTGGTTGCTCTCGGCGACCGAATNGCCGCCGTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C96851               [                             CCACCACCCACCTACTCGCCGGC GTGGTGGCGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGCGNCGACGCTGGCCATGGAAGTAGGGGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGNCGGCGCCGTAGCCGGAGGAGGAGACGGGGATGCCCGCGACG GCTCCTCCGGTTGGTTGCTCTCGGCGACCGCATGGCCGNCGTCCGNCGCCGNATCGTCGCATCTATATCCGGAGAATCCGGGCCCCTCTCTTCCTCCGACATCCACTCCGTCTCCTCCGAGATCTCCTCCGNTGCCCACCTCGTCGTCCTCAACGCCGNCTCCCTCCTCTCTTCCACCGTCG CTCCATCCCGG TTCACCTNCG CTCC GCTACTAACGTCCAGGAGNT  CCCCCGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BP184829             [                             CCACCACCCACCTACTCGCCGGCGGCGGTGGCGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGCGCCGACGCTGGCCATGGAAGTAGGGGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGGCGGCGCCGGAGCCGGAGGAGGAGACGGGGATGCCCGCGACGCGCTCCTCCGGTTGGTTGCTCTCGGCGACCGCATGGCCGCCGTCCGCCGCCGCATCGCCGCATCTATATCCGGAGAATCCGGGCCCCTCTCTTCCTCCGACATCCACTCCGTCTCCTCCGAGATCTCCTCCGCTGCCCACCTCGTCGTCCTCAACGCCGCCTCCCTCCTCTCTTCCACCGTCGCCTCCCTCCCGGCTCCACCTCCGCCTCCGGCTACTACCGTCCAGGAGCTCCCCCCCGTGGTGGTCTCCGTGCCTCAGGAACCCCCGCAAGAAGCAGCCAAGGGCGACGGCGACTACGACGTCGTCGAGCTCGACGCCTCCGAGCTTCTCGCGGAGCACGTCCACTTCTGCGACATCTGCGGCAAGGGGTTCCGCCGCGACGCCAACCTCCGGATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB684957             [                                  ACCCACCTACTCGCCGGCGGCGGTGGCGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGCGCCGACGCTGGCCATGGAAGTAGGGGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGGCGGCGCCGGAGCCGGAGGAGGAGACGGGGATGCCCGCGACGCGCTCCTCCGGTTGGTTGCTCTCGGCGACCGCATGGCCGCCGTCCGCCGCCGCATCGCCGCATCTATATCCGGAGAATCCGGGCCCCTCTCTTCCTCCGACATCCACTCCGTCTCCTCCGAGATCTCCTCCGCTGCCCACCTCGTCGTCCTCAACGCCGCCTCCCTCCTCTCTTCCACCGTCGCCTCCCTCCCGGCTCCACCTCCGCCTCCGGCTACTACCGTCCAGGAGCTCCCCCCCGTGGTGGTCTCCGTGCCTCAGGAACCCCCGCAAGAAGCAGCCAAGGGCGACGGCGACTACGACGTCGTCGAGCTCGACGCCTCCGAGCTTCTCGCGGAGCACGTCCACTTCTGCGACATCTGCGGCAAGGGGTTCCGCCGCGACGCCAACCTCCGGATGCACATGCGCGCCCACGGCGACCGCTTCAAGACCCTGGACGCGCTCTCCAGGCCCGGCCAGCCGAAGCCGCCTGCCGGCCGGGAGGTGCGGTTCTCGAGCCCCTACGCCGGCTGCAACCGGAACCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BP184623             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gtcagaCATGT GGCGGCGCCGC CGCG AATCA TTCCG     GCCACTGCCCCAAGCTCTACGCCTGCGAGCGCTGCGGCGGCAAGAAGCGCTTCGCCGTCCTCGCCGACCTCCGGAGCCACCTCCGCCACTGCGGCGAGGAGGCGCAGTGGCGCTGCTCCTGCGGCACCACCTTCTCCCGCAAGGACAAGCTGTTCGGCCATCTCGCTCTCTTCGAAGGCCACACGCCGGCGATCGCCGAGCCGAACAAGGGTGTGGCGACAGCGGCTGCAGAGGCATCGATTTCTATGATGGAGGAAGGAGGAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB684958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCTACGCCTGCGAGCGCTGCGGCGGCAAGAAGCGCTTCGCCGTCCTCGCCGACCTCCGGAGCCACCTCCGCCACTGCGGCGAGGAGGCGCAGTGGCGCTGCTCCTGCGGCACCACCTTCTCCCGCAAGGACAAGCTGTTCGGCCATCTCGCTCTCTTCGAAGGCCACACGCCGGCGATCGCCGAGCCGAACAAGGGTGTGGCGACAGCGGCTGCAGAGGCATCGATTTCTATGATGGAGGAAGGAGGAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGGCGCTGTTGCCCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAAGAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGACCTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGTTTCCGAA                                                                                                                                                                                                                     ]




>consensus_11584#0
TAGAAAAAAAAAAGGTTGGGAAATGAAGTCCACCACCCACCTACTCGCCGGCGGCGGTGG
CGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGCGCCGACGCTGGCCATGGAAGTAGG
GGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGGCGGCGCCGGAGCCGGAGGAGGAGACGG
GGATGCCCGCGACGCGCTCCTCCGGTTGGTTGCTCTCGGCGACCGCATGGCCGCCGTCCG
CCGCCGCATCGCCGCATCTATATCCGGAGAATCCGGGCCCCTCTCTTCCTCCGACATCCA
CTCCGTCTCCTCCGAGATCTCCTCCGCTGCCCACCTCGTCGTCCTCAACGCCGCCTCCCT
CCTCTCTTCCACCGTCGCCTCCCTCCCGGCTCCACCTCCGCCTCCGGCTACTACCGTCCA
GGAGCTCCCCCCCGTGGTGGTCTCCGTGCCTCAGGAACCCCCGCAAGAAGCAGCCAAGGG
CGACGGCGACTACGACGTCGTCGAGCTCGACGCCTCCGAGCTTCTCGCGGAGCACGTCCA
CTTCTGCGACATCTGCGGCAAGGGGTTCCGCCGCGACGCCAACCTCCGGATGCACATGCG
CGCCCACGGCGACCGCTTCAAGACCCTGGACGCGCTCTCCAGGCCCGGCCAGCCGAAGCC
GCCTGCCGGCCGGGAGGTGCGGTTCTCGTGCCCCTACGCCGGCTGCAACCGGAACCGCGC
GCACCGCCGCTTCCGGCCGCTCAAGTCGGCCGTGTGCGCGCGCAACCACTTCCGGCGGAG
CCACTGCCCCAAGCTCTACGCCTGCGAGCGCTGCGGCGGCAAGAAGCGCTTCGCCGTCCT
CGCCGACCTCCGGAGCCACCTCCGCCACTGCGGCGAGGAGGCGCAGTGGCGCTGCTCCTG
CGGCACCACCTTCTCCCGCAAGGACAAGCTGTTCGGCCATCTCGCTCTCTTCGAAGGCCA
CACGCCGGCGATCGCCGAGCCGAACAAGGGTGTGGCGACAGCGGCTGCAGAGGCATCGAT
TTCTATGATGGAGGAAGGAGGAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGG
TGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGGCGCTGTTGC
CCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGG
CCTATGGTAGGAAGAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGAC
CTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTT
TACCGCTCGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAA
CCTGGAAAGTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATGATGAAAGATATT
AACCGTTGGTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGATTCAGCTTTCTAC
GGTAGTGTAGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAACATCAGCACCCA
ACACTGTAACGAACACCATACATGTGAGATCTTACAATTGATCGAGGTGAAGTCACACTG
AA

consensusID : consensus_11584#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 742
fasta sequence 
                              [GAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGTCGCTGTTGCCCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAAGAGATGACTGGGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGACCTTCCCCCGGCTTGCCTCTGTCTCCCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTGTTCTAGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATGATGAAAGATATTAACCGTTGGTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGATTCAGCTTTCTACGGTAGTGTAGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAACATCAGCACCCAACACTGTAACGAACACCATACATGTGAGATCTTACAATTGATCGAGGTGAAGTCACACTGAAGGCTTCTGGCATGACAGTTTCTACTGGGGTAGGCAATATGTGAGATGTTTTGACAGNTGATCACAGCAGTAGTAAACTGAATGGTTTTAACTTCTTTAGCTAATTTATCAGCAACTCTGCTGATTTCCCTTGGGTTAAAAAAAAAAAA]

[+] EMBL CA766041             [GAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGTCGCTGTTGCCCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAAGAGATGACTGGGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGACCTTCCCCCGGCTTGCCTCTGTCTCCCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTGTTCTAGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATGATGAAAGATATTAACCGTTGGTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGATTCAGCTTTCTACGGTAGTGTAGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAACATCAGCACCCAACACTGTAACGAACACCATACATGTGAGATCTTACAATTGATCGAGGTGAAGTCACACTGAAGGCTTCTGGCATGACAGTTTCTACTGGGGTAGGCAATATGTGAGATGTTTTGACAGNTGATCACAGCAGTAGTAAACTGAATGGTTTTAACTTCTTTAGCTAATTTATCAGCAACTCTGCTGATTTCCCTTGGGTTAAAAAAAAAAAA]




>consensus_11584#1
GAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGGTGGTTTTGATCCGAAGTTCT
TCCAGGAGTGGATGGAGGAGCTCAGAGGTGTCGCTGTTGCCCCCAATTGGTCTGCGCCGT
CAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAAGAGATGA
CTGGGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGACCTTCCCCCGGCTTGCCTCTG
TCTCCCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTGTTCTA
GCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAA
GTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATGATGAAAGATATTAACCGTTG
GTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGATTCAGCTTTCTACGGTAGTGT
AGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAACATCAGCACCCAACACTGTA
ACGAACACCATACATGTGAGATCTTACAATTGATCGAGGTGAAGTCACACTGAAGGCTTC
TGGCATGACAGTTTCTACTGGGGTAGGCAATATGTGAGATGTTTTGACAGNTGATCACAG
CAGTAGTAAACTGAATGGTTTTAACTTCTTTAGCTAATTTATCAGCAACTCTGCTGATTT
CCCTTGGGTTAAAAAAAAAAAA

consensusID : consensus_11584#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 420
fasta sequence 
                              [CAGCGGCTGCAGAGGCATCGATTTCTATGATGGAGGAAGGAGGAGTTNAAGCGAATTGTGATCGAGAGGAGGATNAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCANAGGTGGCGCTGTTGCCCCCAATTGGTNTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAANAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACACACCTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGCAAAAAAAAAAAAAAAA]

[+] EMBL AU172763             [CAGCGGCTGCAGAGGCATCGATTTCTATGATGGAGGAAGGAGGAGTTNAAGCGAATTGTGATCGAGAGGAGGATNAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCANAGGTGGCGCTGTTGCCCCCAATTGGTNTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAANAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACACACCTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGCAAAAAAAAAAAAAAAA]




>consensus_11584#2
CAGCGGCTGCAGAGGCATCGATTTCTATGATGGAGGAAGGAGGAGTTNAAGCGAATTGTG
ATCGAGAGGAGGATNAGGAGGGTGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGG
AGCTCANAGGTGGCGCTGTTGCCCCCAATTGGTNTGCGCCGTCAGAAGCTGGACATTAGC
AGTGCAGCAAGAGCAATTTGGGCCTATGGTAGGAANAGATGACTGAGAAGATGAATGAAG
AAGGGTCCTGTGAAGAACACACCTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTC
TTCCCCTGGTCTCCCCATCTTTTACCGCTCGCTGTTAGCCTGTTATGCAACTCTCTTTTA
CCCATGACAAGGATCTTTATAACCTGGAAAGTAGTGGTATCTGCAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11584#0      TAGAAAAAAAAAAGGTTGGGAAATGAAGTCCACCACCCACCTACTCGCCGGCGGCGGTGG 60
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CGGCGGCTCCGTCGCGCCACCAACGGCTGCCACGGCGCCGACGCTGGCCATGGAAGTAGG 120
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      GGATCCCTCTGGCGCCCTCGTCGGCGGGGCCGGCGGCGCCGGAGCCGGAGGAGGAGACGG 180
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      GGATGCCCGCGACGCGCTCCTCCGGTTGGTTGCTCTCGGCGACCGCATGGCCGCCGTCCG 240
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CCGCCGCATCGCCGCATCTATATCCGGAGAATCCGGGCCCCTCTCTTCCTCCGACATCCA 300
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CTCCGTCTCCTCCGAGATCTCCTCCGCTGCCCACCTCGTCGTCCTCAACGCCGCCTCCCT 360
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CCTCTCTTCCACCGTCGCCTCCCTCCCGGCTCCACCTCCGCCTCCGGCTACTACCGTCCA 420
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      GGAGCTCCCCCCCGTGGTGGTCTCCGTGCCTCAGGAACCCCCGCAAGAAGCAGCCAAGGG 480
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CGACGGCGACTACGACGTCGTCGAGCTCGACGCCTCCGAGCTTCTCGCGGAGCACGTCCA 540
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CTTCTGCGACATCTGCGGCAAGGGGTTCCGCCGCGACGCCAACCTCCGGATGCACATGCG 600
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CGCCCACGGCGACCGCTTCAAGACCCTGGACGCGCTCTCCAGGCCCGGCCAGCCGAAGCC 660
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      GCCTGCCGGCCGGGAGGTGCGGTTCTCGTGCCCCTACGCCGGCTGCAACCGGAACCGCGC 720
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      GCACCGCCGCTTCCGGCCGCTCAAGTCGGCCGTGTGCGCGCGCAACCACTTCCGGCGGAG 780
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CCACTGCCCCAAGCTCTACGCCTGCGAGCGCTGCGGCGGCAAGAAGCGCTTCGCCGTCCT 840
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CGCCGACCTCCGGAGCCACCTCCGCCACTGCGGCGAGGAGGCGCAGTGGCGCTGCTCCTG 900
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CGGCACCACCTTCTCCCGCAAGGACAAGCTGTTCGGCCATCTCGCTCTCTTCGAAGGCCA 960
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      CACGCCGGCGATCGCCGAGCCGAACAAGGGTGTGGCGACAGCGGCTGCAGAGGCATCGAT 1020
consensus_11584#2      --------------------------------------CAGCGGCTGCAGAGGCATCGAT 22
consensus_11584#1      ------------------------------------------------------------
                                                                                   

consensus_11584#0      TTCTATGATGGAGGAAGGAGGAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGG 1080
consensus_11584#2      TTCTATGATGGAGGAAGGAGGAGTTNAAGCGAATTGTGATCGAGAGGAGGATNAGGAGGG 82
consensus_11584#1      --------------------GAGTTGAAGCGAATTGTGATCGAGAGGAGGATGAGGAGGG 40
                                           ***** ************************** *******

consensus_11584#0      TGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGGCGCTGTTGC 1140
consensus_11584#2      TGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCANAGGTGGCGCTGTTGC 142
consensus_11584#1      TGGTTTTGATCCGAAGTTCTTCCAGGAGTGGATGGAGGAGCTCAGAGGTGTCGCTGTTGC 100
                       ******************************************** ***** *********

consensus_11584#0      CCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGG 1200
consensus_11584#2      CCCCAATTGGTNTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGG 202
consensus_11584#1      CCCCAATTGGTCTGCGCCGTCAGAAGCTGGACATTAGCAGTGCAGCAAGAGCAATTTGGG 160
                       *********** ************************************************

consensus_11584#0      CCTATGGTAGGAAGAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGAC 1260
consensus_11584#2      CCTATGGTAGGAANAGATGACTGAGAAGATGAATGAAGAAGGGTCCTGTGAAGAACACAC 262
consensus_11584#1      CCTATGGTAGGAAGAGATGACTGGGAAGATGAATGAAGAAGGGTCCTGTGAAGAACAGAC 220
                       ************* ********* ********************************* **

consensus_11584#0      CTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTT 1320
consensus_11584#2      CTTCCCCCGGCTTGCCTCTGTCTCTCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTT 322
consensus_11584#1      CTTCCCCCGGCTTGCCTCTGTCTCCCTCTCTCTCTCTCTTCCCCTGGTCTCCCCATCTTT 280
                       ************************ ***********************************

consensus_11584#0      TACCGCTCGCTGTT------------AGCCTGTTATGCAACTCTCTTTTACCCATGACAA 1368
consensus_11584#2      TACCGCTCGCTGTT------------AGCCTGTTATGCAACTCTCTTTTACCCATGACAA 370
consensus_11584#1      TACCGCTCGCTGTTGTTCTAGCTGTTAGCCTGTTATGCAACTCTCTTTTACCCATGACAA 340
                       **************            **********************************

consensus_11584#0      GGATCTTTATAACCTGGAAAGTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATG 1428
consensus_11584#2      GGATCTTTATAACCTGGAAAGTAGTGGTATCTGCAAAAAAAAAAAAAAAA---------- 420
consensus_11584#1      GGATCTTTATAACCTGGAAAGTAGTGGTATCTGTTTCCGAAGCAGTCGAAATACCAAATG 400
                       *********************************      **  *    **          

consensus_11584#0      ATGAAAGATATTAACCGTTGGTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGAT 1488
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      ATGAAAGATATTAACCGTTGGTACATCGTGTTGTATGCTCATTGTGTATGTCTTCATGAT 460
                                                                                   

consensus_11584#0      TCAGCTTTCTACGGTAGTGTAGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAA 1548
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      TCAGCTTTCTACGGTAGTGTAGATACAGGTTTCTACACGTTACAGTAGTATTAAACACAA 520
                                                                                   

consensus_11584#0      CATCAGCACCCAACACTGTAACGAACACCATACATGTGAGATCTTACAATTGATCGAGGT 1608
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      CATCAGCACCCAACACTGTAACGAACACCATACATGTGAGATCTTACAATTGATCGAGGT 580
                                                                                   

consensus_11584#0      GAAGTCACACTGAA---------------------------------------------- 1622
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      GAAGTCACACTGAAGGCTTCTGGCATGACAGTTTCTACTGGGGTAGGCAATATGTGAGAT 640
                                                                                   

consensus_11584#0      ------------------------------------------------------------
consensus_11584#2      ------------------------------------------------------------
consensus_11584#1      GTTTTGACAGNTGATCACAGCAGTAGTAAACTGAATGGTTTTAACTTCTTTAGCTAATTT 700
                                                                                   

consensus_11584#0      ------------------------------------------
consensus_11584#2      ------------------------------------------
consensus_11584#1      ATCAGCAACTCTGCTGATTTCCCTTGGGTTAAAAAAAAAAAA 742


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)