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Oryza sativa
cluster # 11586 cluster # 11586       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11586#0 length = 2227 sequences # 8  
consensus_11586#1 length = 590 sequences # 1  

consensusID : consensus_11586#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2227
fasta sequence
                              [ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAAGAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACTAAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGAAATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAGTATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCCAGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGATCATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAGAGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGGAAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAGGTCTTGCTATGAAACCGACTAAAGCTTC-GGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAAC-TATTGATTCAAACCATTTCCATGGCACCCTTCGACGAGCGAAAAGTGAGAATGACCCAAACTCTTGGAGTGAGCCTGGTGGAGAGAAGTTCATGATAAGAGGAAAGACTTACCTGACAGATTACACTAAGGTTGTTGGAGGTGATCCCCTTCTAAAGCTTATTGCTGTCGATTGGTTTAAGGCTGATGAGCGTTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGA-TTCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCATGTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTCTCTGTTGGGAAGATTCATTGATGGAACCGATGCGTTCCGAGATGCCAGATTTAAACTTATACCAAGCATTGTTGAGGGTTATTGGATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTCTTCTGGGAAAAGCAGTAACATGCAATTACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGCACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTATTCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCTAAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCTCAATTATCCTTTTCTCCCACAGAAAAGGTGGGATTTTTTTTTGGCAGATCTGCTTTTCTGCAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTTCACATGTACAGATTACATATTACAGACATGATGCTGTCGTACATACAAATAGAGGAAATGAGCGTTTATTTATCTCCAGTTTGGGGACAGCAAAAAAAAAGA-TCCCAGTGAGCCTTACTGGACTTCTCATGCTGCCACTTCACAATTGTGGAGTCTGTTTAGCTGTGCCAAGGTACTTGTGGACATGGAGTTTGTGGCCAAAAGGTCTTGAAATAGTTGGTCAAGAGAAGTCCAGGAGGTCTTGAAAAGAAAACATCGCAGTCAACAACAAAGTTGGCTGGTCCACTCGGCAACGTGGCGTATCCCAACTGGATACGTGTTCACGTCTGAAAGGAAGTCAAGATTGAAATTCGTTTCAAGATATTTATTTACCAACTGATTTGCACGGTTCAACAGTCATAGAAACAGTGAGAGTGCGGTGGACCTTTATCTGGAGTGACTACCTAGTACAACAGAAAAACATATCTTACCTACAAACACATACATGGAGGCAAATGCAAATTCTTTGCTTGGTTGACCATCAGAAGAAAAGGCAAATGCATAATCTGACGAAGGGAGTCTGCATAGGTATTTCTTTCTGTTGCATACTGAATTGAGGTGTAATTAGCCCTTTCTTGTAATTTAGGGGTATGTCAATGTTTCCTTCCAATTTTCAGTTTTCTCACTGGTTTCCTCTTTGAGATTTCGTCCTCCTTTGTACATATACTATTCGACCTTTTTTTTTATGATTCGATAATCCACCATAATTTAATGAAATGCATGCTAATGCAATTGAGGAAAAAAAAGA]

[+] EMBL AK067282             [ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAAGAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACTAAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGAAATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAGTATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCCAGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGATCATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAGAGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGGAAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAGGTCTTGCTATGAAACCGACTAAAGCTTC GGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAAC TATTGATTCAAACCATTTCCATGGCACCCTTCGACGAGCGAAAAGTGAGAATGACCCAAACTCTTGGAGTGAGCCTGGTGGAGAGAAGTTCATGATAAGAGGAAAGACTTACCTGACAGATTACACTAAGGTTGTTGGAGGTGATCCCCTTCTAAAGCTTATTGCTGTCGATTGGTTTAAGGCTGATGAGCGTTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGA TTCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCATGTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTCTCTGTTGGGAAGATTCATTGATGGAACCGATGCGTTCCGAGATGCCAGATTTAAACTTATACCAAGCATTGTTGAGGGTTATTGGATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTCTTCTGGGAAAAGCAGTAACATGCAATTACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGCACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTATTCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCTAAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCTCAATTATCCTTTTCTCCCACAGAAAAGGTGGGA TTTTTTTTGGCAGATCTGCTTTTCTGCAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTTCACATGTACAGATTACCTATTACAGACATGATGCTGTCGTACATACAAATAGAGGAAATGAGCGTTTATTTATCTCCAGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI118777             [                                                                                                    AATTCCTCAACATGGGAACTAAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGAAATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAGTATTGCTTTTGCTTTGCCCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCCAGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGATCATCCAGAGTGAACTGGATGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAGAAGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGGAAAAGTGAAGTTCGAGAATATTTCATGGGCTATCGCAGGTCTTGCTATGAAACCGACTAAAGCTTCGGGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAACTTATTGATTCAAACCATTTCCATGGCACCCTTCGACGAGCGAAAAGTGAGAATGACCCAAACTCTTGGAGTGAGCCTGGTGGAGARAAGTTCATGATAAGAGGAAAGACTTACCTGACAGATTACACTAAGGTTGTTGGAGGTGATCCCCTTCTAAAGCTTATTGCTGTCGATTGGTTTAAGGCTGATGAGCGTTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAGAGAAGA TTCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB627078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGATAAGAGGAAAGACTTACCTGACAGATTACACTAAGGTTGTTGGAGGTGATCCCCTTCTAAAGCTTATTGCTGTCGATTGGTTTAAGGCTGATGAGCGTTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGA TTCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCATGTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTCTCTGTTGGGAAGATTCATTGATGGAACCGATGCGTTCCGAGATGCCAGATTTAAACTTATACCAAGCATTGTTGAGGGTTATTGGATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTCTTCTGGGAAAAGCAGTAACATGCAATTACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGCACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTATTCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCTAAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCTCAATTATCCTTTTCTCCCACAGAAAAGGTGGGATTTTTTTTTGGCAGATCTGCTTTTCTGCAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTTCACATGTACAGATTACATATTACAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB628542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTAAGGTTGTTGGAGGTGATCCCCTTCTAAAGCTTATTGCTGTCGATTGGTTTAAGGCTGATGAGCGTTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGA TTCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCATGTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTCTCTGTTGGGAAGATTCATTGATGGAACCGATGCGTTCCGAGATGCCAGATTTAAACTTATACCAAGCATTGTTGAGGGTTATTGGATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTCTTCTGGGAAAAGCAGTAACATGCAATTACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGCACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTATTCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCTAAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCTCAATTATCCTTTTCTCCCACAGAAAAGGTGGGATTTTTTTTTGGCAGATCTGCTTTTCTGCAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTTCACATGTACAGATTACATATTACAGACATGATGCTGTGGTACATACAAATAGAGCAAATGAGCGTTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB635524             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTCGATTGGTTTAAGGCTGATGAGCGTTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGA TTCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCATGTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTCTCTGTTGGGAAGATTCATTGATGGAACCGATGCGTTCCGAGATGCCAGATTTAAACTTATACCAAGCATTGTTGAGGGTTATTGGATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTCTTCTGGGAAAAGCAGTAACATGCAATTACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGCACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTATTCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCTAAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCTCAATTATCCTTTTCTCCCACAGAAAAGGTGGGATTTTTTTTTGGCAGATCTGCTTTTCTGCAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTTCACATGTACAGATTACATATTACAGACATGATGCTGTCGTACATACAAATAGAGGAAATGAGCGTTTATTTATCTCCAGTTTGGGGACAGCAAAAAAAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB631406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGCCTCACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGATTTCCCTTCATACGGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCATGTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTTTCTGTTGGGAAGATTCATTGATGGAACCGATGCGTTCCGAGATGCCAGATTTAAACTTATCCCAAGCATTGTTGAGGGTTATTGGATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTTTTTTGGGAAAAGCAGTAACATGCAATTCCCTTCGCCAGGATAACTTTTTAGAGATAGATGTTGCCATTGGTTTTTCATCCGTTGCACGGAGCATTATTGGTTTAGTCCTGGGATATGTCCCAGCCCTTGTTGTTGATCTTGCTATTTTAATTGAGGCAAAGGAAGAGAAAGAGCTCCCTGAATACATTTTTGGCCCAGTTCGCCTAAATCGTGGGAATCCCGATTTTGCAGTACCCATTTAAAGTCAGTTTTATATTTTTTGGCTCAATTATCCTTTTTTCCCCCAGAAAAGGTGGGATTTTTTTTTGGCAGATCTGCTTTTCTGCAATTTTCTTTATTATCTGGGGTTGCATCCCATTTGTAAAAAAGAAGGTAGCATCAATTTCCCATGTCCAGATTACATATTCCAGACATGATGCTGTGGTCCATACAAATAGAGGAAAGGAGCGTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU172584             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGCACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTATTCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCTAAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCTCAATTATCCTTTTCTCCCACAGAAAAGGTGGGA TTTTTTTTGGCAGATCTGCTTTTCTGCAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTTCACATGTACAGATTACCTATTACAGACATGATGCTGTCGTACATACAAATAGAGGAAATGAGCGTTTATTTAaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB676449             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCAATTTCACATGTACAGATTACCTATTACAGACATGATGCTGTCGTACATACAAATAGAGGAAATGAGCGTTTATTTATCTCCAGTTTGGGGACAGC AACCGAAGGATTCCCAGTGAGCCTTACTGGACTTCTCATGCTGCCACTTCACAATTGTGGAGTCTGTTTAGCTGTGCCAAGGTACTTGTGGACATGGAGTTTGTGGCCAAAAGGTCTTGAAATAGTTGGTCAAGAGAAGTCCAGGAGGTCTTGAAAAGAAAACATCGCAGTCAACAACAAAGTTGGCTGGTCCACTCGGCAACGTGGCGTATCCCAACTGGATACGTGTTCACGTCTGAAAGGAAGTCAAGATTGAAATTCGTTTCAAGATATTTATTTACCAACTGATTTGCACGGTTCAACAGTCATAGAAACAGTGAGAGTGCGGTGGACCTTTATCTGGAGTGACTACCTAGTACAACAGAAAAACATATCTTACCTACAAACACATACATGGAGGCAAATGCAAATTCTTTGCTTGGTTGACCATCAGAAGAAAAGGCAAATGCATAATCTGACGAAGGGAGTCTGCATAGGTATTTCTTTCTGTTGCATACTGAATTGAGGTGTAATTAGCCCTTTCTTGTAATTTAGGGGTATGTCAATGTTTCCTTCCAATTTTCAGTTTTCTCACTGGTTTCCTCTTTGAGATTTCGTCCTCCTTTGTACATATACTATTCGACCTTTTTTTTTATGATTCGATAATCCACCATAATTTAATGAAATGCATGCTAATGCAATTGAGGAAAAAAAAGA]


>consensus_11586#0 ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAA GAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACT AAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGA AATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAG TATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCC AGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGAT CATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAG AGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGG AAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAGGTCTTGCTATGAAACCGACTAA AGCTTCGGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAACTATTGATTCAAA CCATTTCCATGGCACCCTTCGACGAGCGAAAAGTGAGAATGACCCAAACTCTTGGAGTGA GCCTGGTGGAGAGAAGTTCATGATAAGAGGAAAGACTTACCTGACAGATTACACTAAGGT TGTTGGAGGTGATCCCCTTCTAAAGCTTATTGCTGTCGATTGGTTTAAGGCTGATGAGCG TTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGAT TCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCAT GTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTCTCTGTTGGGAAGATTCATTGATGG AACCGATGCGTTCCGAGATGCCAGATTTAAACTTATACCAAGCATTGTTGAGGGTTATTG GATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTCTTCTGGGAAAAGCAGTAACATGCAA TTACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGC ACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTAT TCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCT AAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCT CAATTATCCTTTTCTCCCACAGAAAAGGTGGGATTTTTTTTTGGCAGATCTGCTTTTCTG CAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTT CACATGTACAGATTACATATTACAGACATGATGCTGTCGTACATACAAATAGAGGAAATG AGCGTTTATTTATCTCCAGTTTGGGGACAGCAAAAAAAAAGATCCCAGTGAGCCTTACTG GACTTCTCATGCTGCCACTTCACAATTGTGGAGTCTGTTTAGCTGTGCCAAGGTACTTGT GGACATGGAGTTTGTGGCCAAAAGGTCTTGAAATAGTTGGTCAAGAGAAGTCCAGGAGGT CTTGAAAAGAAAACATCGCAGTCAACAACAAAGTTGGCTGGTCCACTCGGCAACGTGGCG TATCCCAACTGGATACGTGTTCACGTCTGAAAGGAAGTCAAGATTGAAATTCGTTTCAAG ATATTTATTTACCAACTGATTTGCACGGTTCAACAGTCATAGAAACAGTGAGAGTGCGGT GGACCTTTATCTGGAGTGACTACCTAGTACAACAGAAAAACATATCTTACCTACAAACAC ATACATGGAGGCAAATGCAAATTCTTTGCTTGGTTGACCATCAGAAGAAAAGGCAAATGC ATAATCTGACGAAGGGAGTCTGCATAGGTATTTCTTTCTGTTGCATACTGAATTGAGGTG TAATTAGCCCTTTCTTGTAATTTAGGGGTATGTCAATGTTTCCTTCCAATTTTCAGTTTT CTCACTGGTTTCCTCTTTGAGATTTCGTCCTCCTTTGTACATATACTATTCGACCTTTTT TTTTATGATTCGATAATCCACCATAATTTAATGAAATGCATGCTAATGCAATTGAGGAAA AAAAAGA



consensusID : consensus_11586#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence
                              [ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAAGAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACTAAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGAAATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAGTATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCCAGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGATCATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAGAGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGGAAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAGCTTCGGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAACTATTGATTCAAACCATTTCCATGGCA]

[+] EMBL CB676448             [ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAAGAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACTAAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGAAATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAGTATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCCAGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGATCATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAGAGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGGAAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAGCTTCGGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAACTATTGATTCAAACCATTTCCATGGCA]


>consensus_11586#1 ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAA GAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACT AAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGA AATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAG TATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCC AGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGAT CATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAG AGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGG AAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAGCTTCGGTTGAGAAGAGTGAATT GGTTACAAATTCAACTCCGGTAACTATTGATTCAAACCATTTCCATGGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11586#0      ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAA 60
consensus_11586#1      ACAATGGTTTCGTGGACAAGATGGGGCATATACCATTTTGCAGATTCCTGCTTGTCACAA 60
                       ************************************************************

consensus_11586#0      GAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACT 120
consensus_11586#1      GAACAAACCTCCAAGGCATGGCTACGAGCGTACAAAAATCAATTCCTCAACATGGGAACT 120
                       ************************************************************

consensus_11586#0      AAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGA 180
consensus_11586#1      AAGAAGGTTGAACCCACCAGGATCATCAACTCCGAAATGCCTTGTTACTCATATGTTGGA 180
                       ************************************************************

consensus_11586#0      AATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAG 240
consensus_11586#1      AATGAGCCCAAGTTTTTGGGATAGATGGAAGAGAAGACATAACGAGAATTTTGACAGAAG 240
                       ************************************************************

consensus_11586#0      TATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCC 300
consensus_11586#1      TATTGCTTTTGCTTTGCTCAGCCAAGTAGCAGGTCTAAGAGAATACTTTGCAGCAAATCC 300
                       ************************************************************

consensus_11586#0      AGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGAT 360
consensus_11586#1      AGCTTTGACATCTGATTTGCCTTCAACAGTAGTGAAGCCCAAACAGTCTGATTCTTTGAT 360
                       ************************************************************

consensus_11586#0      CATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAG 420
consensus_11586#1      CATCCAGAGTGAACTGGAAGATTCTGAACTTAATGATGAATTCTATGATGCACTTGCTAG 420
                       ************************************************************

consensus_11586#0      AGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGG 480
consensus_11586#1      AGGCGAATCCTTTGAAGATGAGGATAGTGATGACGATGATGATATGATTCCTAAGGCTGG 480
                       ************************************************************

consensus_11586#0      AAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAGGTCTTGCTATGAAACCGACTAA 540
consensus_11586#1      AAAAGTGAAGTTCAAGAATATTTCATGGGCTATCGCAG---------------------- 518
                       **************************************                      

consensus_11586#0      AGCTTCGGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAACTATTGATTCAAA 600
consensus_11586#1      --CTTCGGTTGAGAAGAGTGAATTGGTTACAAATTCAACTCCGGTAACTATTGATTCAAA 576
                         **********************************************************

consensus_11586#0      CCATTTCCATGGCACCCTTCGACGAGCGAAAAGTGAGAATGACCCAAACTCTTGGAGTGA 660
consensus_11586#1      CCATTTCCATGGCA---------------------------------------------- 590
                       **************                                              

consensus_11586#0      GCCTGGTGGAGAGAAGTTCATGATAAGAGGAAAGACTTACCTGACAGATTACACTAAGGT 720
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TGTTGGAGGTGATCCCCTTCTAAAGCTTATTGCTGTCGATTGGTTTAAGGCTGATGAGCG 780
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TTTTGATTCAGTTGCCTTACACCCCAAGAGCCTCGTTCAGTCAGAAGCTGCAAAGAAGAT 840
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TCCCTTCATACTGGTCATAAACTTGCAGGTTCCAGCGAAGCCAAACTATAACTTGGTCAT 900
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      GTACTACGCAGCAGAAAGGCCCGTGAATAAAGATTCTCTGTTGGGAAGATTCATTGATGG 960
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      AACCGATGCGTTCCGAGATGCCAGATTTAAACTTATACCAAGCATTGTTGAGGGTTATTG 1020
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      GATGGTAAAACGTGCAGTTGGAACAAAAGCTTGTCTTCTGGGAAAAGCAGTAACATGCAA 1080
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TTACCTTCGCCAGGATAACTTTCTAGAGATAGATGTTGACATTGGTTCTTCATCCGTTGC 1140
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      ACGGAGCATTATTGGTCTAGTCCTGGGATATGTCACAGGCCTTGTTGTTGATCTTGCTAT 1200
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TCTAATTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAATACATTCTTGGCACAGTTCGCCT 1260
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      AAATCGTGCGAATCCCGACTCTGCAGTACCCATCTAAAGTCAGTTCTATATTTCTTGGCT 1320
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      CAATTATCCTTTTCTCCCACAGAAAAGGTGGGATTTTTTTTTGGCAGATCTGCTTTTCTG 1380
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      CAATTTTCTTTATTATCTGTGGTTGCATACCATTTGTAAAAAAGAAGGTAGCATCAATTT 1440
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      CACATGTACAGATTACATATTACAGACATGATGCTGTCGTACATACAAATAGAGGAAATG 1500
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      AGCGTTTATTTATCTCCAGTTTGGGGACAGCAAAAAAAAAGATCCCAGTGAGCCTTACTG 1560
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      GACTTCTCATGCTGCCACTTCACAATTGTGGAGTCTGTTTAGCTGTGCCAAGGTACTTGT 1620
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      GGACATGGAGTTTGTGGCCAAAAGGTCTTGAAATAGTTGGTCAAGAGAAGTCCAGGAGGT 1680
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      CTTGAAAAGAAAACATCGCAGTCAACAACAAAGTTGGCTGGTCCACTCGGCAACGTGGCG 1740
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TATCCCAACTGGATACGTGTTCACGTCTGAAAGGAAGTCAAGATTGAAATTCGTTTCAAG 1800
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      ATATTTATTTACCAACTGATTTGCACGGTTCAACAGTCATAGAAACAGTGAGAGTGCGGT 1860
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      GGACCTTTATCTGGAGTGACTACCTAGTACAACAGAAAAACATATCTTACCTACAAACAC 1920
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      ATACATGGAGGCAAATGCAAATTCTTTGCTTGGTTGACCATCAGAAGAAAAGGCAAATGC 1980
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      ATAATCTGACGAAGGGAGTCTGCATAGGTATTTCTTTCTGTTGCATACTGAATTGAGGTG 2040
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TAATTAGCCCTTTCTTGTAATTTAGGGGTATGTCAATGTTTCCTTCCAATTTTCAGTTTT 2100
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      CTCACTGGTTTCCTCTTTGAGATTTCGTCCTCCTTTGTACATATACTATTCGACCTTTTT 2160
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      TTTTATGATTCGATAATCCACCATAATTTAATGAAATGCATGCTAATGCAATTGAGGAAA 2220
consensus_11586#1      ------------------------------------------------------------
                                                                                   

consensus_11586#0      AAAAAGA 2227
consensus_11586#1      -------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)