cluster # 1159

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Oryza sativa
cluster # 1159 cluster # 1159 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1159#0 length = 496 sequences # 2

consensusID : consensus_1159#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 496
fasta sequence

                              [GGCTGTCGACAGAGAACGCG-TGG-G--GGAGGGCCACGGCGCGGTCGCCGTCGGCGACGG-GATCGACGTCGACGGGATAGTGGGCCGGGTGCGGGGCGTGCTCGGCCGCGCCGACGCGCTCCGGCTGCGCACCGTGAAGCGCGCGGTGGAGATCCTCGAGCCGGCGCAGGCGGCCGAGCTGCTCGTCGCCGCCGCCGACATGGAGATCGGCTTCCGGGAGTTCGGGCTCAAGTACAGCTCGGCCCGCAGCGACTAGCGCTTCCACNCCGCGGCCCAGCTTACAGGCCCAGTTTTTTTCTCCAATACTGTTGGTTTTACTGGGCCGAAAAAGCCATAAAATCTTAGTGAGTGGTGTGCTGGGACGTGGCTGGGCAGGACT-AGCCCTCTGTTAAGAGAAAAAATGTAATAAAATGCAAGCAACTATGATCGTTTTTTGCTGTGCAAAGCTGATGATTCACCCATGGATCGATTGCTCGATCCGTTTAAGATGCTAAAAAAA]

[+] EMBL AU071230             [        ACAGAGAACGCG TGG G  GGAGGGCCACGGCGCGGTCGCCGTCGGCGACGG GATCGACGTCGACGGGATAGTGGGCCGGGTGCGGGGCGTGCTCGGCCGCGCCGACGCGCTCCGGCTGCGCACCGTGAAGCGCGCGGTGGAGATCCTCGAGCCGGCGCAGGCGGCCGAGCTGCTCGTCGCCGCCGCCGACATGGAGATCGGCTTCCGGGAGTTCGGGCTCAAGTACAGCTCGGCCCGCAGCGACTAGCGCTTCCACNCCGCGGCCCAGCTTACAGGCCCAGTTTTTTTCTCCAATACTGTTGGTTTTACTGGGCCGAAAAAGCCATAAAATCTTAGTGAGTGGTGTGCTGGGACGTGGCTGGGCAGGACT AGCCCTCTGTTAAGAGAAAAAATGTAATAAAATGCAAGCAACTATGATCGTTTTTTGCTGTGCAAAGCTGATGATTCACCCATGGATCGATTGCTCGATCCGTTTAAGATGCTAAAAAAA]
[+] EMBL AU161285             [ggctgtcgcggGAGATGGCGCTGGTGCAGGAGGGCCACGGCGCGGTCGNCGTCGG GGCGGNGATCGACGTCGACGGGATAGTGGGCCGGGTGCGGGGCGTGCTCGGCCGCCCCGACGCGCTCCGGCTGCNCACCGTAAAGCNCGCGGTGNAGATCCTCNANCCGGCGCAGGCGGCCGANCTGCTCGTNGCCGCCGCCGACATGGAGATCGGCTTCCGGAAGTTCGGGCTCAAGTACAGCTCGGCCCGCAGCGACTAGCGCTTCCACCCCGCGGCCCAGCTTACAGGCCCAGTTTTTTTCTCCAATACTGTTGGTTTTACTGGGCCGAAAAAGCCATAAAATCTTAGTGAGTGGTGTNCTTGGACGTGGCTTGGCAGGACTAAGCCCTCTTTTAAGAGNAAAAATGTAATAAAATTCAAGNAACTATGATCGTTTTTTGCTGT                                                           ]




>consensus_1159#0
GGCTGTCGACAGAGAACGCGTGGGGGAGGGCCACGGCGCGGTCGCCGTCGGCGACGGGAT
CGACGTCGACGGGATAGTGGGCCGGGTGCGGGGCGTGCTCGGCCGCGCCGACGCGCTCCG
GCTGCGCACCGTGAAGCGCGCGGTGGAGATCCTCGAGCCGGCGCAGGCGGCCGAGCTGCT
CGTCGCCGCCGCCGACATGGAGATCGGCTTCCGGGAGTTCGGGCTCAAGTACAGCTCGGC
CCGCAGCGACTAGCGCTTCCACNCCGCGGCCCAGCTTACAGGCCCAGTTTTTTTCTCCAA
TACTGTTGGTTTTACTGGGCCGAAAAAGCCATAAAATCTTAGTGAGTGGTGTGCTGGGAC
GTGGCTGGGCAGGACTAGCCCTCTGTTAAGAGAAAAAATGTAATAAAATGCAAGCAACTA
TGATCGTTTTTTGCTGTGCAAAGCTGATGATTCACCCATGGATCGATTGCTCGATCCGTT
TAAGATGCTAAAAAAA

clustalw multiple alignements is not computed in this case