cluster # 11590

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Oryza sativa
cluster # 11590 cluster # 11590 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11590#0 length = 2219 sequences # 8

consensus_11590#1 length = 572 sequences # 1

consensusID : consensus_11590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2219
fasta sequence

                              [CGCGCCGAGCTGCTCGTCTCCTACGTCGCCTCCGCCGGCCGCGCGTGGGCGCTGCTACGGAGCCCGCACCTCGCCGCCTCCTTCCGCGACCTCGACGCCGAGCTCGCCGTCGTCCTCGACGTCCTCCCGGCGGCATCACTCCGCCTCTCGCACGACGCCACCGGCCTGCTCGACCTCCTCCGCGCCCACTGCCGCTGCCGCGCGCCCGCGCAATACCATGACCCCGACGAGGCGGCGCTCCGGGAACGCCTCATGGATGCGCTCCGCCAGTTCGACCTCGGCCAGCCACCTGACCACCCCTCGCTCCAATCGCTCCTCGCCGACATGGGCATCTCCACCGCGGCTTCTTGCCGCGCAGAAATCGATTACCTGGAGGAGCAAATCTTGAGCCAAGAAGAGGACACCGACCTGCCGCTCGTCGGCAGCGTCCTCGCCTTGCTCCGCTACTGCCTATTCGCCGTGTTCGACCCTAGCAACGCGAAGGCGCTCCGGGATTGGCCGTTGTCGGGCAACAGGCAGCGGCTTCTCTCGATTGGCGGCGGCGATGACACCTCCTTCTCGGTGCCAAAGGAGTTCTCATGCCCAATTTCTCTGGATTTGATGCGTGATCCCGTGGTGGCGTCCACCGGGCAGACGTATGACCGGCCGTCGATCATACAGTGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAGATCACCGGCTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGTATGGCTTGCAGTATGATTCGCCCGAGAGCAACGAGGGGATGGCGGAATGTGTTGCTGCATCTTGCAGTAGTCGGGCTGCAATGGAGGCAAACAAGGCCACAGCTAGGATTTTGGTCAGGATGCTGGAGGACGGGTCAGAAAATGTAAAGGCAGTCGCTGCTAAGGAAATTCGGTTGCTGGCAAAGACCGGGAAGCAAAACCGGGCTTTCATCGCCGACTTGGGTGCGATTCCGCTGCTTTGCAGGTTGCTCTTGTCGAATGATTGGATGGCACAAGAGAATGCAGTGACAGCGCTGCTCAATTTGTCAATCTTCGAGCCAAACAAGGGACGGATTATGGAACAGGAAGGCTGCTTGCGGCTTATCGTCGGTGTTCTACAGAATGGATGGACTACGGAAGCGAAGGAGAATGCTGCGGCCACTCTGTTTAGTCTATCAGTGGTCCATAATTTCAAAAAACTGATCATGAATGAGCCTGGGGCTGTTGAGGAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGGTGATGGCACTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGCGCAGTTGTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTGGTGCTTTGGCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCTCTGAAACTGTGATCACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATGCAGTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCAAAGATTCCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCGCCAAGAAGAAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAATGGCACTAGGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAAGGCGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGGTGCCCTAGGTGAAAGGTTTCTACCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCAAAATTCTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAATCCAAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCAATTTTTGTTTTATTTTTTTATAAAAAAGCACCAAATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACACTGAGGCAA-CAGTGGAAAGAAAAAAAAAAAAAAAAA]

[+] EMBL CB630469             [CGCGCCGAGCTGCTCGTCTCCTACGTCGCCTCCGCCGGCCGCGCGTGGGCGCTGCTACGGAGCCCGCACCTCGCCGCCTCCTTCCGCGACCTCGACGCCGAGCTCGCCGTCGTCCTCGACGTCCTCCCGGCGGCATCACTCCGCCTCTCGCACGACGCCACCGGCCTGCTCGACCTCCTCCGCGCCCACTGCCGCTGCCGCGCGCCCGCGCAATACCATGACCCCGACGAGGCGGCGCTCCGGGAACGCCTCATGGATGCGCTCCGCCAGTTCGACCTCGGCCAGCCACCTGACCACCCCTCGCTCCAATCGCTCCTCGCCGACATGGGCATCTCCACCGCGGCTTCTTGCCGCGCAGAAATCGATTACCTGGAGGAGCAAATCTTGAGCCAAGAAGAGGACACCGACCTGCCGCTCGTCGGCAGCGTCCTCGCCTTGCTCCGCTACTGCCTATTCGCCGTGTTCGACCCTAGCAACGCGAAGGCGCTCCGGGATTGGCCGTTGTCGGGCAACAGGCAGCGGCTTCTCTCGATTGGCGGCGGCGATGACACCTCCTTCTCGGTGCCAAAGGAGTTCTCATGCCCAATTTCTCTGGATTTGATGCGTGATCCCGTGGTGGCGTCCACCGGGCAGACATATGACCGGCCGTCGATCATACAGTGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAGATCACCGGCTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGTATGGCTTGCAGTATGATTCGCCCGAGAGCAACGAGGGGATGCCGGAATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK062592             [                                                                                                                         TCCTCCCGGCGGCATCACTCCGCCTCTCGCACGACGCCACCGGCCTGCTCGACCTCCTCCGCGCCCACTGCCGCTGCCGCGCGCCCGCGCAATACCATGACCCCGACGAGGCGGCGCTCCGGGAACGCCTCATGGATGCGCTCCGCCAGTTCGACCTCGGCCAGCCACCTGACCACCCCTCGCTCCAATCGCTCCTCGCCGACATGGGCATCTCCACCGCGGCTTCTTGCCGCGCAGAAATCGATTACCTGGAGGAGCAAATCTTGAGCCAAGAAGAGGACACCGACCTGCCGCTCGTCGGCAGCGTCCTCGCCTTGCTCCGCTACTGCCTATTCGCCGTGTTCGACCCTAGCAACGCGAAGGCGCTCCGGGATTGGCCGTTGTCGGGCAACAGGCAGCGGCTTCTCTCGATTGGCGGCGGCGATGACACCTCCTTCTCGGTGCCAAAGGAGTTCTCATGCCCAATTTCTCTGGATTTGATGCGTGATCCCGTGGTGGCGTCCACCGGGCAGACGTATGACCGGCCGTCGATCATACAGTGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAGATCACCGGCTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGTATGGCTTGCAGTATGATTCGCCCGAGAGCAACGAGGGGATGGCGGAATGTGTTGCTGCATCTTGCAGTAGTCGGGCTGCAATGGAGGCAAACAAGGCCACAGCTAGGATTTTGGTCAGGATGCTGGAGGACGGGTCAGAAAATGTAAAGGCAGTCGCTGCTAAGGAAATTCGGTTGCTGGCAAAGACCGGGAAGCAAAACCGGGCTTTCATCGCCGACTTGGGTGCGATTCCGCTGCTTTGCAGGTTGCTCTTGTCGAATGATTGGATGGCACAAGAGAATGCAGTGACAGCGCTGCTCAATTTGTCAATCTTCGAGCCAAACAAGGGACGGATTATGGAACAGGAAGGCTGCTTGCGGCTTATCGTCGGTGTTCTACAGAATGGATGGACTACGGAAGCGAAGGAGAATGCTGCGGCCACTCTGTTTAGTCTATCAGTGGTCCATAATTTCAAAAAACTGATCATGAATGAGCCTGGGGCTGTTGAGGAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGGTGATGGCACTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGCGCAGTTGTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTGGTGCTTTGGCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCTCTGAAACTGTGATCACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATGCAGTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCAAAGATTCCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCGCCAAGAAGAAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAATGGCACTAGGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAAGGCGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGGTGCCCTAGGTGAAAGGTTTCTACCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCAAAATTCTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAATCCAAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCAATTTTTGTTTTATTTTTTTATAAAAAAGCACCAAATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACACTGAG                                ]
[+] EMBL CB643247             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGGGCAGACGTATGACCGGCCGTCGATCATACAGTGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAGATCACCGGCTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGTATGGCTTGCAGTATGATTCGCCCGAGAGCAACGAGGGGATGGCGGAATGTGTTGCTGCATCTTGCAGTAGTCGGGCTGCAATGGAGGCAAACAAGGCCACAGCTAGGATTTTGGTCAGGATGCTGGAGGACGGGTCAGAAAATGTAAAGGCAGTCGCTGCTAAGGAAATTCGGTTGCTGGCAAAGACCGGGAAGCAAAACCGGGCTTTCATCGCCGACTTGGGTGCGATTCCGCTGCTTTGCAGGTTGCTCTTGTCGAATGATTGGATGGCACAAGAGAATGCAGTGACAGCGCTGCTCAATTTGTCAATCTTCGAGCCAAACAAGGGACGGATTATGGAACAGGAAGGCTGCTTGCGGCTTATCGTCGGTGTTCTACAGAATGGATGGACTACGGAAGCGAAGGAGAATGCTGCGGCCACTCTGTTTAGTCTATCAGTGGTCCATAATTTCAAAAAACTGATCATGAATGAGCCTGGGGCTGTTGAGGAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGGTGATGGCACTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGCGCAGTTGTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCNGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU032329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCATGAATGAGCCTGGGGCTGTTGAGGAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGGTGATGGCACTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGCGCAGTTGTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTGGTGCTTTGGCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCNCTGAAACTGTGATCACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGNAAATGCAGTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTTCTTTGGTGCAGAAAGTTGCCAAGATTCCAGGGTTGAACACAGTTATACAGACCATCACCCTCAACGGAANAAAGCGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF325064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGCGCAGTTGTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTGGTGCTTTGGCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCTCTGAAACTGTGATCACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATGCAGTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCAAAGATTCCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCGCCAAGAAGAAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAATGGCACTAGGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAAGGCGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTG                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB630470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATGCAGTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCAAAGATTCCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGTGCCAAGAAGAAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAATGGCACTAGGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAAGGCGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGGTGCCCTAGGTGAAAGGTTTTTACCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCAAAATTTTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAATCCAAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCAATTTTTGTTTTATTTTTTTATAAAAAAGCCCCAAATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACCCTGAGGCAACCAGTGGAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB643248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAGGTAAGGAAAATGCAGTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCAAAGATTCCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCGCCAAGAAGAAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAATGGCACTAGGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAAGGCGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGGTGCCCTAGGTGAAAGGTTTTTACCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCAAAATTCTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAATCCAAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCAATTTTTGTTTTATTTTTTTATAAAAAAGCACCAAATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACACTGAGGCAA CAAAGGGAAGAAAtggta         ]
[+] EMBL AU173816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGCGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGGTGCCCTAGGTGAAAGGTTTCTACCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCAAAATTCTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAATCCAAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCAATTTTTGTTTTATTTTTTTATAAAAAAGCACCAAATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACACTGAGGCAA CAGTGGAAAGAAAAAAAAAAAA     ]




>consensus_11590#0
CGCGCCGAGCTGCTCGTCTCCTACGTCGCCTCCGCCGGCCGCGCGTGGGCGCTGCTACGG
AGCCCGCACCTCGCCGCCTCCTTCCGCGACCTCGACGCCGAGCTCGCCGTCGTCCTCGAC
GTCCTCCCGGCGGCATCACTCCGCCTCTCGCACGACGCCACCGGCCTGCTCGACCTCCTC
CGCGCCCACTGCCGCTGCCGCGCGCCCGCGCAATACCATGACCCCGACGAGGCGGCGCTC
CGGGAACGCCTCATGGATGCGCTCCGCCAGTTCGACCTCGGCCAGCCACCTGACCACCCC
TCGCTCCAATCGCTCCTCGCCGACATGGGCATCTCCACCGCGGCTTCTTGCCGCGCAGAA
ATCGATTACCTGGAGGAGCAAATCTTGAGCCAAGAAGAGGACACCGACCTGCCGCTCGTC
GGCAGCGTCCTCGCCTTGCTCCGCTACTGCCTATTCGCCGTGTTCGACCCTAGCAACGCG
AAGGCGCTCCGGGATTGGCCGTTGTCGGGCAACAGGCAGCGGCTTCTCTCGATTGGCGGC
GGCGATGACACCTCCTTCTCGGTGCCAAAGGAGTTCTCATGCCCAATTTCTCTGGATTTG
ATGCGTGATCCCGTGGTGGCGTCCACCGGGCAGACGTATGACCGGCCGTCGATCATACAG
TGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAGATCACCGG
CTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGTATGGCTTG
CAGTATGATTCGCCCGAGAGCAACGAGGGGATGGCGGAATGTGTTGCTGCATCTTGCAGT
AGTCGGGCTGCAATGGAGGCAAACAAGGCCACAGCTAGGATTTTGGTCAGGATGCTGGAG
GACGGGTCAGAAAATGTAAAGGCAGTCGCTGCTAAGGAAATTCGGTTGCTGGCAAAGACC
GGGAAGCAAAACCGGGCTTTCATCGCCGACTTGGGTGCGATTCCGCTGCTTTGCAGGTTG
CTCTTGTCGAATGATTGGATGGCACAAGAGAATGCAGTGACAGCGCTGCTCAATTTGTCA
ATCTTCGAGCCAAACAAGGGACGGATTATGGAACAGGAAGGCTGCTTGCGGCTTATCGTC
GGTGTTCTACAGAATGGATGGACTACGGAAGCGAAGGAGAATGCTGCGGCCACTCTGTTT
AGTCTATCAGTGGTCCATAATTTCAAAAAACTGATCATGAATGAGCCTGGGGCTGTTGAG
GAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGGTGATGGCA
CTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGCGCAGTT
GTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTGGTGCTTTG
GCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCTCTGAAACTGTGATC
ACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATGCAGTCTCA
GCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCAAAGATT
CCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCGCCAAGAAG
AAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAATGGCACTA
GGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAAGGCGTGCT
GCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGGTGCCCTAG
GTGAAAGGTTTCTACCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCAAA
ATTCTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAATCCAAAGGATTTAATACT
CGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATAT
AGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCAA
TTTTTGTTTTATTTTTTTATAAAAAAGCACCAAATATGTATGCTGTATGCTGTAAACTGT
TTAAATTAATTAGAAGCTTTACACTGAGGCAACAGTGGAAAGAAAAAAAAAAAAAAAAA

consensusID : consensus_11590#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence

                              [TGCCCAGAAGAAAGCAAGCCTGATTGTCNAGATGTGCCACGAGAAGCCCAATGCCATCAGCAATGGCACTAGGGAGCACACTTGACACGTCGCTTGATCGTTCACTTGGTAGGGAACACACACCACTTAAGGCGTGCTGCCGAGCCTCTTGGCACGCTGGAGAATTGTCACAACCCGATTTCGATATCANGTGCACGGTGCCCTAGGTGAAAGGTTTCTACCCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCCAAATTCTTTCATTTCATGCTCCCATGAAGGTATACCAAATTTAATCCCAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCCATTTTTGTTTTATTTTTTTATAAAAAAGCACCCAATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACCCTGAGGCCACCGTGGAAAGAAATGGTATTTCCAAAAAAAAAA]

[+] EMBL BQ908529             [TGCCCAGAAGAAAGCAAGCCTGATTGTCNAGATGTGCCACGAGAAGCCCAATGCCATCAGCAATGGCACTAGGGAGCACACTTGACACGTCGCTTGATCGTTCACTTGGTAGGGAACACACACCACTTAAGGCGTGCTGCCGAGCCTCTTGGCACGCTGGAGAATTGTCACAACCCGATTTCGATATCANGTGCACGGTGCCCTAGGTGAAAGGTTTCTACCCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTGTCCCCCAAATTCTTTCATTTCATGCTCCCATGAAGGTATACCAAATTTAATCCCAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAATTGTCCCATTTTTGTTTTATTTTTTTATAAAAAAGCACCCAATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACCCTGAGGCCACCGTGGAAAGAAATGGTATTTCCAAAAAAAAAA]




>consensus_11590#1
TGCCCAGAAGAAAGCAAGCCTGATTGTCNAGATGTGCCACGAGAAGCCCAATGCCATCAG
CAATGGCACTAGGGAGCACACTTGACACGTCGCTTGATCGTTCACTTGGTAGGGAACACA
CACCACTTAAGGCGTGCTGCCGAGCCTCTTGGCACGCTGGAGAATTGTCACAACCCGATT
TCGATATCANGTGCACGGTGCCCTAGGTGAAAGGTTTCTACCCCTGGATTATATGGATGG
TTACATTTGGTGAGTTTTGTCCCCCAAATTCTTTCATTTCATGCTCCCATGAAGGTATAC
CAAATTTAATCCCAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGT
GAAATGTGGATAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCC
TCCTTGGCAAGCTCGGAAATTGTCCCATTTTTGTTTTATTTTTTTATAAAAAAGCACCCA
ATATGTATGCTGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACCCTGAGGCCAC
CGTGGAAAGAAATGGTATTTCCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11590#0      CGCGCCGAGCTGCTCGTCTCCTACGTCGCCTCCGCCGGCCGCGCGTGGGCGCTGCTACGG 60
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      AGCCCGCACCTCGCCGCCTCCTTCCGCGACCTCGACGCCGAGCTCGCCGTCGTCCTCGAC 120
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GTCCTCCCGGCGGCATCACTCCGCCTCTCGCACGACGCCACCGGCCTGCTCGACCTCCTC 180
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      CGCGCCCACTGCCGCTGCCGCGCGCCCGCGCAATACCATGACCCCGACGAGGCGGCGCTC 240
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      CGGGAACGCCTCATGGATGCGCTCCGCCAGTTCGACCTCGGCCAGCCACCTGACCACCCC 300
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      TCGCTCCAATCGCTCCTCGCCGACATGGGCATCTCCACCGCGGCTTCTTGCCGCGCAGAA 360
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      ATCGATTACCTGGAGGAGCAAATCTTGAGCCAAGAAGAGGACACCGACCTGCCGCTCGTC 420
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GGCAGCGTCCTCGCCTTGCTCCGCTACTGCCTATTCGCCGTGTTCGACCCTAGCAACGCG 480
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      AAGGCGCTCCGGGATTGGCCGTTGTCGGGCAACAGGCAGCGGCTTCTCTCGATTGGCGGC 540
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GGCGATGACACCTCCTTCTCGGTGCCAAAGGAGTTCTCATGCCCAATTTCTCTGGATTTG 600
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      ATGCGTGATCCCGTGGTGGCGTCCACCGGGCAGACGTATGACCGGCCGTCGATCATACAG 660
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      TGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAGATCACCGG 720
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      CTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGTATGGCTTG 780
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      CAGTATGATTCGCCCGAGAGCAACGAGGGGATGGCGGAATGTGTTGCTGCATCTTGCAGT 840
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      AGTCGGGCTGCAATGGAGGCAAACAAGGCCACAGCTAGGATTTTGGTCAGGATGCTGGAG 900
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GACGGGTCAGAAAATGTAAAGGCAGTCGCTGCTAAGGAAATTCGGTTGCTGGCAAAGACC 960
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GGGAAGCAAAACCGGGCTTTCATCGCCGACTTGGGTGCGATTCCGCTGCTTTGCAGGTTG 1020
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      CTCTTGTCGAATGATTGGATGGCACAAGAGAATGCAGTGACAGCGCTGCTCAATTTGTCA 1080
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      ATCTTCGAGCCAAACAAGGGACGGATTATGGAACAGGAAGGCTGCTTGCGGCTTATCGTC 1140
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GGTGTTCTACAGAATGGATGGACTACGGAAGCGAAGGAGAATGCTGCGGCCACTCTGTTT 1200
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      AGTCTATCAGTGGTCCATAATTTCAAAAAACTGATCATGAATGAGCCTGGGGCTGTTGAG 1260
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGGTGATGGCA 1320
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      CTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGCGCAGTT 1380
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTGGTGCTTTG 1440
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCTCTGAAACTGTGATC 1500
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      ACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATGCAGTCTCA 1560
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      GCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCAAAGATT 1620
consensus_11590#1      ------------------------------------------------------------
                                                                                   

consensus_11590#0      CCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCGCCAAGAAG 1680
consensus_11590#1      --------------------------------------------------TGCCCAGAAG 10
                                                                          *** *****

consensus_11590#0      AAAGCAAGCCTGATTGTCAAGATGTGCCA-GAGAAGCCAAATGCCATCAGCAATGGCACT 1739
consensus_11590#1      AAAGCAAGCCTGATTGTCNAGATGTGCCACGAGAAGCCCAATGCCATCAGCAATGGCACT 70
                       ****************** ********** ******** *********************

consensus_11590#0      AGGGAGCACA-TTGACA-GTCG-TTGATCGTTCA-TTGGTAGGGAACA-ACACA--TTAA 1792
consensus_11590#1      AGGGAGCACACTTGACACGTCGCTTGATCGTTCACTTGGTAGGGAACACACACCACTTAA 130
                       ********** ****** **** *********** ************* ****   ****

consensus_11590#0      GGCGTGCTGC-GAGCTT--TGGCAG--TGGAGAATTGTCA-AACCCGATTTCGATATCAG 1846
consensus_11590#1      GGCGTGCTGCCGAGCCTCTTGGCACGCTGGAGAATTGTCACAACCCGATTTCGATATCAN 190
                       ********** **** *  *****   ************* ****************** 

consensus_11590#0      -TGCA-GGTGCCCTAGGTGAAAGGTTTCTACCC-TGGATTATATGGATGGTTACATTTGG 1903
consensus_11590#1      GTGCACGGTGCCCTAGGTGAAAGGTTTCTACCCCTGGATTATATGGATGGTTACATTTGG 250
                        **** *************************** **************************

consensus_11590#0      TGAGTTTTGTCCCCAAAATTCTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAAT 1963
consensus_11590#1      TGAGTTTTGTCCCCCAAATTCTTTCATTTCATGCTCCCATGAAGGTATACCAAATTTAAT 310
                       ************** ********************** ************ *********

consensus_11590#0      CCAAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGA 2023
consensus_11590#1      CCCAAGGATTTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGA 370
                       ** *********************************************************

consensus_11590#0      TAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAA 2083
consensus_11590#1      TAACTGTGCAGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAA 430
                       ************************************************************

consensus_11590#0      GCTCGGAAATTGTCCAATTTTTGTTTTATTTTTTTATAAAAAAGCACCAAATATGTATGC 2143
consensus_11590#1      GCTCGGAAATTGTCCCATTTTTGTTTTATTTTTTTATAAAAAAGCACCCAATATGTATGC 490
                       *************** ******************************** ***********

consensus_11590#0      TGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACACTGAGGCAACAGTGGAAAGA 2203
consensus_11590#1      TGTATGCTGTAAACTGTTTAAATTAATTAGAAGCTTTACCCTGAGGCCACCGTGGAAAGA 550
                       *************************************** ******* ** *********

consensus_11590#0      AAAAAAA-----AAAAAAAAA- 2219
consensus_11590#1      AATGGTATTTCCAAAAAAAAAA 572
                       **    *     *********