These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11591#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 655 fasta sequence [TTTTTTTTAAATATTAAACTGAATTATTGGACTAATTTCGTAATGAGCCACTATTGAAGGTACAAAATACATATACATAGGAAATAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG-CACATCGATTAA-CCCA-TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC-CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG-CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCAGTCCAGTGCAGTGT] [+] EMBL CF313106 [TTTTTTTTAAATATTAAACTGAATTATTGGACTAATTTCGTAATGAGCCACTATTGAAGGTACAAAATACATATACATAGGAAATAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAACAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTC ] [+] EMBL CF311169 [ ttttttttTAGGAAATAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGCCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCC ] [-] EMBL CF316082 [ ttttTAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAGCCACATCGATTAACCCCATTCA ACACACACA ACACCCCATATATATTGGTCAAGCACCAACCNCAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTC ] [+] EMBL CF319334 [ ttttttTAATAGCCAAACCAGTTTAATATATTCATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATATATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTc ] [-] EMBL CF321666 [ CATCACTTCATCTGTGGATACACCATTACAAGCATAGTACGTGAATAGTGAAACCAATAACATAG CACATCGATTAA CCCA TCACACACACACACACACCCCATA ATATTGGTCAAGCACCAACC CAAATGGCCAAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCAGTCCAGTGCAGTGT] [-] EMBL CF278120 [ CACACACACACACCCCATA ATATTGGTCAAGCACCAACC CAAATGGCCGAGCTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCA ] [-] EMBL CF313085 [ CTTCTTTATTTTTCTGCATCACAATTCACACGCACACATGATAGATGGTAGATGCAGGCAGGCATCTTAGCAGTTGCAAGGGTTGCACCTGCAGCTGGAACCGCAGCTGCAGCCATGGGCGGTCTCGCCGGACTCTGCGGCCGCCTCAAACTGCTGNCGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATTTTCTACTCCTTCA ] [-] EMBL AU096733 [ TG CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCA GAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATgcatagcc ] [-] EMBL AU065867 [ G CGCCTTCTTCTCCGGCGCCACACCCAGCACGACGGTGGCCTTGGTGCTGCTGCTCTTCTCTTCCAGGTCAGGGTACTTCTTTCCGCAGGAGCAGTTTGAGCCGCAGCTGCAGCTAGATCCACAGCTGCAAGACATCTTCTCTCAGTCTGTAATTAAGCTCAAGCAACTGAAGATGAAATCAACTAAGGAGAAGAAGAAGAGCTTTTGAGATGATGAGCGCAATgcatagc ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||