cluster # 11595

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11595 cluster # 11595 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11595#0 length = 926 sequences # 5
consensus_11595#1 length = 668 sequences # 1

consensus_11595#2 length = 644 sequences # 1
consensus_11595#3 length = 307 sequences # 1
consensus_11595#4 length = 206 sequences # 1

consensusID : consensus_11595#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 926
fasta sequence

                              [AAACGGGGGCCCCAAAAGCCCCAAANGGAACAATAACGAANCACCACCACAGAGGCAGCCGCACAAGAACAAGAGGGAACCCCCGGGCCGCAGGANATCGGTACGAGGGAGAGGGGCTGCATGCCTTCCTTTGACTTTGCGACGGAGAAGTGGAGTGTGGCCCTCCAAGGGCCGTTGAACAGAATTCTCGAGGAATCCAATGGCACGCTCAGCTATCATGACCTTGCCAATCAGCTTATGTTATCTGGACTTAAAGGCACTTTGTGTACATCGCACTGGAATGATCAATTTTATACCGTGGATCTATGGTTTCTAACTGATTCTGAAAAGGGTACATGGTCCAAAGATCATAGGATTAATGTTGATGCTGTTTTTCATGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTGCAGATTTATGATCCAGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACTGGAGCAAGTGTGTTCACT-GGAAGTTTATTATGTCCACAGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGTCCCTCGAAAATGTAACAAAAAAAATGGTGTAGCTGATATTTGCTGTGTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGCCGTTAGCTCGAGTTTGAGGGATCGTGTGCTCCTGTCTCGAGTTTTACCTGATGCAACGACTTTATGCAAATAGTAGGATGAAATTAATGCTCGTCAACGTAAGTT]

[+] EMBL CA753076             [AAACGGGGGCCCCAAAAGCCCCAAANGGAACAATAACGAANCACCACCACAGAGGCAGCCGCACAAGAACAAGAGGGAACCCCCGGGCCGCAGGANATCGGTACGAGGGAGAGGGGCTGCATGCCTNCCTTCGACTTAGCGACGGAGAAGTGGAGTGTGGCCCTCCAAGGGCCGTTGAACAGAATTCTCGAGGAATCCAATGGCACGCTCAGCTATCATGACCTTGCCAATCAGCTTATGTTATCTGGACTTAAAGGCACTTTGTGTACATCGCACTGGAATGATCAATTTTATACCGTGGATCTATGGTTTCTAACTGATTCTGAAAAGGGTACATGGTCCAAAGATCATAGGATTAATGTTGATGCTGTTTTTCATGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTGCAGATTTATGATCCAGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACTGGAGCAAGTGTGTTCACT GGAAGTTTATTATGTCCACAGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCCGGTTGGTGTTATCAAGGTGTAGCTGATGTCCCTCAAANATGT ACAAAAAAAAT GTGTAACTGATA TTGCTGTGTC TCGTCATGTC CTGATTCTC GATC ATCCCG TAATGCGATATG TCTGTAATC TTTCAACA                                                                                                                              ]
[+] EMBL AK069093             [                                                                                                                          GCCTTCCTTTGACTTTGCGACGGAGAAGTGGAGTGTGGCCCTCCAAGGGCCGTTGAACAGAATTCTCGAGGAATCCAATGGCACGCTCAGCTATCATGACCTTGCCAATCAGCTTATGTTATCTGGACTTAAAGGCACTTTGTGTACATCGCACTGGAATGATCAATTTTATACCGTGGATCTATGGTTTCTAACTGATTCTGAAAAGGGTACATGGTCCAAAGATCATAGGATTAATGTTGATGCTGTTTTTCATGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTGCAGATTTATGATCCAGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACTGGAGCAAGTGTGTTCACT GGAAGTTTATTATGTCCACAGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGTCCCTCGAAAATGTAACAAAAAAAATGGTGTAGCTGATATTTGCTGTGTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGCCGTTAGCTCGAGTTTGAGGGATCGTGTGCTCCTGTCTCGAGTTTTACCTGATGCAACGACTTTATGCAAATAGTAGGATGAAATTAATGCTCGTCAACGTAAGTT]
[+] EMBL AK073823             [                                                                                                                          GCCTTCCTTTGACTTTGCGACGGAGAAGTGGAGTGTGGCCCTCCAAGGGCCGTTGAACAGAATTCTCGAGGAATCCAATGGCACGCTCAGCTATCATGACCTTGCCAATCAGCTTATGTTATCTGGACTTAAAGGCACTTTGTGTACATCGCACTGGAATGATCAATTTTATACCGTGGATCTATGGTTTCTAACTGATTCTGAAAAGGGTACATGGTCCAAAGATCATAGGATTAATGTTGATGCTGTTTTTCATGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTGCAGATTTATGATCCAGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACTGGAGCAAGTGTGTTCACT GGAAGTTTATTATGTCCACAGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGTCCCTCGAAAATGTAACAAAAAAAATGGTGTAGCTGATATTTGCTGTGTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGC                                                                                                         ]
[+] EMBL AU029976             [                                                                                                                                                                                                                                                                                                                            CTGATTCTGAAAAGGGTACATGGTCCAAAGATCATAGGATTAATGTTGATGCTGTTTTTCATGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTGCAGATTTATGATCCAGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACTGGAGCAAGTGTGTTCACTGGGAAGTTTATTATGTCCACAGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCAC AAGCTGGGC                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI806780             [                                                                                                                                                                                                                                                                                                                               tTTCTG AAAGGGAACATGGTCCAAAGATCATAGGATTAATGTTGATGCTGTTTTTCATGGGATTGGAGATTATCTGAAAGTGCAACCCTTGCTTGTGACGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTGCAGATTTATGATCCCGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACTGGAGCAAGTGTGTTCACT GGAAGTTTATTATGTCCCCNGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACCAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGTCCCTCGAAAATGTAACCAAAAAAATGGTGTAGCTGATATTTGCTGTGTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACCATTCTGGAGTTAAGCATATGCCGTTAGCTCGAGTTTGAaaaaaaaaa                                                                               ]




>consensus_11595#0
AAACGGGGGCCCCAAAAGCCCCAAANGGAACAATAACGAANCACCACCACAGAGGCAGCC
GCACAAGAACAAGAGGGAACCCCCGGGCCGCAGGANATCGGTACGAGGGAGAGGGGCTGC
ATGCCTTCCTTTGACTTTGCGACGGAGAAGTGGAGTGTGGCCCTCCAAGGGCCGTTGAAC
AGAATTCTCGAGGAATCCAATGGCACGCTCAGCTATCATGACCTTGCCAATCAGCTTATG
TTATCTGGACTTAAAGGCACTTTGTGTACATCGCACTGGAATGATCAATTTTATACCGTG
GATCTATGGTTTCTAACTGATTCTGAAAAGGGTACATGGTCCAAAGATCATAGGATTAAT
GTTGATGCTGTTTTTCATGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACG
GATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTGCAGATTTAT
GATCCAGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACTGGAGCAAGT
GTGTTCACTGGAAGTTTATTATGTCCACAGAGTGTGTGACAAGGTTGGCAGGGCATTGTA
CGAGGTGCTACCACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTT
TGGTGTCATCAAGGTGTAGCTGATGTCCCTCGAAAATGTAACAAAAAAAATGGTGTAGCT
GATATTTGCTGTGTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATAT
GTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGCCGTTAGCTCGAGTTTGAGG
GATCGTGTGCTCCTGTCTCGAGTTTTACCTGATGCAACGACTTTATGCAAATAGTAGGAT
GAAATTAATGCTCGTCAACGTAAGTT

consensusID : consensus_11595#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 668
fasta sequence

                              [GACTGTAAAGCCACTTTTGGTGTACATCGCCACTGGGAATGAATCAAANTGTTGATACCCGTGGGATCTATGGGTTTTCTAACTGATTCTGAAAAAGGGTACATGGTCCAAGATCATAGGATTAATGTTGATCTGTTTTTCACTGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACCGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTCGCAGATTTATGATCCTGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACCTGGAGCCAAGTGTGTTCACTGGAAGTTTATTATGTCCCACCAGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACCAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGGTGCCCTCGAAAATGGTGACACAAAAAAATGGGTGTAGCTGGATATTTGGCTGGTGGTCTTCGTCATGGTGCTGCTGGAATCTGCTGGATCGATCGCGTTATTGCGCGATATGGTTCCTGTGAATCATGATCAACATTCTGGAGTTAAGCATATCCGTTAGCTCGAGTTTGAGGGATCGTCGNGCTCCNGTCTCGAGTTTTACCNGAAAA]

[+] EMBL BQ909154             [GACTGTAAAGCCACTTTTGGTGTACATCGCCACTGGGAATGAATCAAANTGTTGATACCCGTGGGATCTATGGGTTTTCTAACTGATTCTGAAAAAGGGTACATGGTCCAAGATCATAGGATTAATGTTGATCTGTTTTTCACTGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTTGTGACCGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTCGCAGATTTATGATCCTGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACCTGGAGCCAAGTGTGTTCACTGGAAGTTTATTATGTCCCACCAGAGTGTGTGACAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACCAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGGTGCCCTCGAAAATGGTGACACAAAAAAATGGGTGTAGCTGGATATTTGGCTGGTGGTCTTCGTCATGGTGCTGCTGGAATCTGCTGGATCGATCGCGTTATTGCGCGATATGGTTCCTGTGAATCATGATCAACATTCTGGAGTTAAGCATATCCGTTAGCTCGAGTTTGAGGGATCGTCGNGCTCCNGTCTCGAGTTTTACCNGAAAA]




>consensus_11595#1
GACTGTAAAGCCACTTTTGGTGTACATCGCCACTGGGAATGAATCAAANTGTTGATACCC
GTGGGATCTATGGGTTTTCTAACTGATTCTGAAAAAGGGTACATGGTCCAAGATCATAGG
ATTAATGTTGATCTGTTTTTCACTGGGATTGGAGATTATCTGAAAGTGCAACCTTTGCTT
GTGACCGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGGGGTTGTCGC
AGATTTATGATCCTGTAACTGACACTTCCTCGGATATAATTCAGATTAGTATCTACACCT
GGAGCCAAGTGTGTTCACTGGAAGTTTATTATGTCCCACCAGAGTGTGTGACAAGGTTGG
CAGGGCATTGTACGAGGTGCTACCACCAAAGCTGGGCACTTAGGATCTCTACTGCTCTGA
TGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGGTGCCCTCGAAAATGGTGACAC
AAAAAAATGGGTGTAGCTGGATATTTGGCTGGTGGTCTTCGTCATGGTGCTGCTGGAATC
TGCTGGATCGATCGCGTTATTGCGCGATATGGTTCCTGTGAATCATGATCAACATTCTGG
AGTTAAGCATATCCGTTAGCTCGAGTTTGAGGGATCGTCGNGCTCCNGTCTCGAGTTTTA
CCNGAAAA

consensusID : consensus_11595#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 644
fasta sequence

                              [ACAGAATTTTCGAGGAATCCAATGGCCCGCTCAGGTATCATGACCTTGCCAATCAGGTTATGTTATTTGGACTTAAAGGCCCTTTGTGTACATCGCCCTGGAAAGATCAATTTTATACCGGGGATTTATGGTTTTTAACTGATTTTGAAAAGGGGACATGGTCCAAAGATCATAGGATTAATGTTGAGGCTGTTTTTCATGGGATTGGGGATTATTTGAAAGGGCCCCCCTTGCTTGTGACGGATGAGGGAAAGATAGTACTTTTGATGCAGATGGGATCAAAAGGGGTTGGGCAGATTTATGATCCCGTAACTGACCCTTCCTCGGATATAATTCAGATTAGTATTTCCCCCGGGGCAAGGGGGTTCCCTGGAAGTTTTTTATGTCCCCCGAGGGTGTGACAAGGTTGGCAGGGCATTGTTCGAGGGGGTTCCCCAAAGCTGGGCCCTTAGGATTTTTTCTGCTTTGATGAAGTTTCGGTTTGGGGTCATCAAGGGGTAGGGGATGTCCCCCGAAAAAGTAACAAAAAAAAAGGGGTAGGGGATATTTGCGGGGTTTTTGTCAAGTTTTTGAATTTTTGATCGATCGGGTTATTGGGAAATGTTCTGTAATCATATCAACAATTTTGGGGTTAAGCATATGCC]

[-] EMBL CB642211             [ACAGAATTTTCGAGGAATCCAATGGCCCGCTCAGGTATCATGACCTTGCCAATCAGGTTATGTTATTTGGACTTAAAGGCCCTTTGTGTACATCGCCCTGGAAAGATCAATTTTATACCGGGGATTTATGGTTTTTAACTGATTTTGAAAAGGGGACATGGTCCAAAGATCATAGGATTAATGTTGAGGCTGTTTTTCATGGGATTGGGGATTATTTGAAAGGGCCCCCCTTGCTTGTGACGGATGAGGGAAAGATAGTACTTTTGATGCAGATGGGATCAAAAGGGGTTGGGCAGATTTATGATCCCGTAACTGACCCTTCCTCGGATATAATTCAGATTAGTATTTCCCCCGGGGCAAGGGGGTTCCCTGGAAGTTTTTTATGTCCCCCGAGGGTGTGACAAGGTTGGCAGGGCATTGTTCGAGGGGGTTCCCCAAAGCTGGGCCCTTAGGATTTTTTCTGCTTTGATGAAGTTTCGGTTTGGGGTCATCAAGGGGTAGGGGATGTCCCCCGAAAAAGTAACAAAAAAAAAGGGGTAGGGGATATTTGCGGGGTTTTTGTCAAGTTTTTGAATTTTTGATCGATCGGGTTATTGGGAAATGTTCTGTAATCATATCAACAATTTTGGGGTTAAGCATATGCC]




>consensus_11595#2
ACAGAATTTTCGAGGAATCCAATGGCCCGCTCAGGTATCATGACCTTGCCAATCAGGTTA
TGTTATTTGGACTTAAAGGCCCTTTGTGTACATCGCCCTGGAAAGATCAATTTTATACCG
GGGATTTATGGTTTTTAACTGATTTTGAAAAGGGGACATGGTCCAAAGATCATAGGATTA
ATGTTGAGGCTGTTTTTCATGGGATTGGGGATTATTTGAAAGGGCCCCCCTTGCTTGTGA
CGGATGAGGGAAAGATAGTACTTTTGATGCAGATGGGATCAAAAGGGGTTGGGCAGATTT
ATGATCCCGTAACTGACCCTTCCTCGGATATAATTCAGATTAGTATTTCCCCCGGGGCAA
GGGGGTTCCCTGGAAGTTTTTTATGTCCCCCGAGGGTGTGACAAGGTTGGCAGGGCATTG
TTCGAGGGGGTTCCCCAAAGCTGGGCCCTTAGGATTTTTTCTGCTTTGATGAAGTTTCGG
TTTGGGGTCATCAAGGGGTAGGGGATGTCCCCCGAAAAAGTAACAAAAAAAAAGGGGTAG
GGGATATTTGCGGGGTTTTTGTCAAGTTTTTGAATTTTTGATCGATCGGGTTATTGGGAA
ATGTTCTGTAATCATATCAACAATTTTGGGGTTAAGCATATGCC

consensusID : consensus_11595#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence

                              [ACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGTCCCTCGAAAATGTAACAAAAAAAATGGTGTAGCTGATATTTGCTGTGTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGCCGTTNGCTCGAGTTTGAGGGATCGTGTGCTCCTGTCTCGNGTTTTNCCTGATGCNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU029977             [ACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGTCCCTCGAAAATGTAACAAAAAAAATGGTGTAGCTGATATTTGCTGTGTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGCCGTTNGCTCGAGTTTGAGGGATCGTGTGCTCCTGTCTCGNGTTTTNCCTGATGCNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11595#3
ACAAAGCTGGGCACTTAGGATCTCTACTGCTCTGATGATGTTTCGGTTTGGTGTCATCAA
GGTGTAGCTGATGTCCCTCGAAAATGTAACAAAAAAAATGGTGTAGCTGATATTTGCTGT
GTCTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCA
TATCAACAATTCTGGAGTTAAGCATATGCCGTTNGCTCGAGTTTGAGGGATCGTGTGCTC
CTGTCTCGNGTTTTNCCTGATGCNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

consensusID : consensus_11595#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 206
fasta sequence

                              [AGAGGGCGAGACAAGGGGAGAAATTTTTCGGGGGTGGAGCTGATGCCCCTCGAAAATGTAACAAAAAAAATGGTGTAGATGATATTTGCTGTGTTTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGCCGTTAGCTCGAAAAAAAAAAAAAAA]

[-] EMBL CA760445             [AGAGGGCGAGACAAGGGGAGAAATTTTTCGGGGGTGGAGCTGATGCCCCTCGAAAATGTAACAAAAAAAATGGTGTAGATGATATTTGCTGTGTTTTCGTCATGTCTCTGAATCTCTGATCGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATGCCGTTAGCTCGAAAAAAAAAAAAAAA]




>consensus_11595#4
AGAGGGCGAGACAAGGGGAGAAATTTTTCGGGGGTGGAGCTGATGCCCCTCGAAAATGTA
ACAAAAAAAATGGTGTAGATGATATTTGCTGTGTTTTCGTCATGTCTCTGAATCTCTGAT
CGATCGCGTTATTGCGATATGTTCTGTAATCATATCAACAATTCTGGAGTTAAGCATATG
CCGTTAGCTCGAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11595#0      AAACGGGGGCCCCAAAAGCCCCAAANGGAACAATAACGAANCACCACCACAGAGGCAGCC 60
consensus_11595#2      ------------------------------------------------------------
consensus_11595#1      ------------------------------------------------------------
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      GCACAAGAACAAGAGGGAACCCCCGGGCCGCAGGANATCGGTACGAGGGAGAGGGGCTGC 120
consensus_11595#2      ------------------------------------------------------------
consensus_11595#1      ------------------------------------------------------------
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      ATGCCTTCCTTTGACTTTGCGACGGAGAAGTGGAGTGTGGCCCTCCAAGGGCCGTTGAAC 180
consensus_11595#2      ----------------------------------------------------------AC 2
consensus_11595#1      ------------------------------------------------------------
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      AGAATTCTCGAGGAATCCAATGGCACGCTCAGCTATCATGACCTTGCCAATCAGCTTATG 240
consensus_11595#2      AGAATTTTCGAGGAATCCAATGGCCCGCTCAGGTATCATGACCTTGCCAATCAGGTTATG 62
consensus_11595#1      ------------------------------------------------------------
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      TTATCTGGACT-TAAAGGCACTTT--GTGTACATCGCA-CTGGAAT--GATCAATTT--- 291
consensus_11595#2      TTATTTGGACT-TAAAGGCCCTTT--GTGTACATCGCC-CTGGAAA--GATCAATTT--- 113
consensus_11595#1      -------GACTGTAAAGCCACTTTTGGTGTACATCGCCACTGGGAATGAATCAAANTGTT 53
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      --TATACCGTGGATCTATGG--TTTCTAACTGATTCTGAAAAGGGT-ACATGGTCCAAAG 346
consensus_11595#2      --TATACCGGGGATTTATGG--TTTTTAACTGATTTTGAAAAGGGG-ACATGGTCCAAAG 168
consensus_11595#1      GATACCCGTGGGATCTATGGGTTTTCTAACTGATTCTGAAAAAGGGTACATGGTCCAA-G 112
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      ATCATAGGATTAATGTTGATGCTGTTTTTCA-TGGGATTGGAGATTATCTGAAAGTGCAA 405
consensus_11595#2      ATCATAGGATTAATGTTGAGGCTGTTTTTCA-TGGGATTGGGGATTATTTGAAAGGGCCC 227
consensus_11595#1      ATCATAGGATTAATGTTGAT-CTGTTTTTCACTGGGATTGGAGATTATCTGAAAGTGCAA 171
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      CCTTTGCTTGTGAC-GGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGG 464
consensus_11595#2      CCCTTGCTTGTGAC-GGATGAGGGAAAGATAGTACTTTTGATGCAGATGGGATCAAAAGG 286
consensus_11595#1      CCTTTGCTTGTGACCGGATGAGGGAAAGATAGTACTCTCGATGCAGATGGGATCAAAAGG 231
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      GGTTGT-GCAGATTTATGATCCAGTAACTGACACTTCCTCGGATATAATTCAGATTAGTA 523
consensus_11595#2      GGTTGG-GCAGATTTATGATCCCGTAACTGACCCTTCCTCGGATATAATTCAGATTAGTA 345
consensus_11595#1      GGTTGTCGCAGATTTATGATCCTGTAACTGACACTTCCTCGGATATAATTCAGATTAGTA 291
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      TCTACACTGGAG--CAAGTGTGTTCACTGGAAGTTTATTATGTCCA--CAGAGTGTGTGA 579
consensus_11595#2      TTTCCCCCGGGG--CAAGGGGGTTCCCTGGAAGTTTTTTATGTCCC--CCGAGGGTGTGA 401
consensus_11595#1      TCTACACCTGGAGCCAAGTGTGTTCACTGGAAGTTTATTATGTCCCACCAGAGTGTGTGA 351
consensus_11595#3      ------------------------------------------------------------
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      CAAGGTTGGCAGGGCATTGTACGAGGTGCTACC-ACAAAGCTGGGCACTTAGGATCTCTA 638
consensus_11595#2      CAAGGTTGGCAGGGCATTGTTCGAGGGGGTTCC-CCAAAGCTGGGCCCTTAGGATTTTTT 460
consensus_11595#1      CAAGGTTGGCAGGGCATTGTACGAGGTGCTACCACCAAAGCTGGGCACTTAGGATCTCTA 411
consensus_11595#3      ----------------------------------ACAAAGCTGGGCACTTAGGATCTCTA 26
consensus_11595#4      ----------------------------------------------------------AG 2
                                                                                   

consensus_11595#0      CTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGT--CCCTCGAAAA 696
consensus_11595#2      CTGCTTTGATGAAGTTTCGGTTTGGGGTCATCAAGGGGTAGGGGATGT--CCCCCGAAAA 518
consensus_11595#1      CTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGGTGCCCTCGAAAA 471
consensus_11595#3      CTGCTCTGATGATGTTTCGGTTTGGTGTCATCAAGGTGTAGCTGATGT--CCCTCGAAAA 84
consensus_11595#4      AGGGCGAGACAAGG----GGAGAAATTTTTCGGGGGTGGAGCTGATGC--CCCTCGAAAA 56
                         *    **  * *    **       *      ** * **  ****   *** ******

consensus_11595#0      -TGTAACAAAAAAAATGGTGTAGCT---GATATTTGC---TGTGTCTTCGTCATGTCTCT 749
consensus_11595#2      -AGTAACAAAAAAAAAGGGGTAGGG---GATATTTGC---GGGGTTTTTGTCAAGTTTTT 571
consensus_11595#1      TGGTGACACAAAAAAATGGGTGTAGCTGGATATTTGGCTGGTGGTCTTCGTCATGGTGCT 531
consensus_11595#3      -TGTAACAAAAAAAATGGTGTAGCT---GATATTTGC---TGTGTCTTCGTCATGTCTCT 137
consensus_11595#4      -TGTAACAAAAAAAATGGTGTAGAT---GATATTTGC---TGTGTTTTCGTCATGTCTCT 109
                         ** *** ******  * **       ********       ** ** **** *    *

consensus_11595#0      G----AATCT--CTGATCGATCGCGTTATTGCGATATGT----TCTGT-AATCAT-ATCA 797
consensus_11595#2      G----AATTT--TTGATCGATCGGGTTATTGGGAAATGT----TCTGT-AATCAT-ATCA 619
consensus_11595#1      GCTGGAATCTGCTGGATCGATCGCGTTATTGCGCGATATGGTTCCTGTGAATCATGATCA 591
consensus_11595#3      G----AATCT--CTGATCGATCGCGTTATTGCGATATGT----TCTGT-AATCAT-ATCA 185
consensus_11595#4      G----AATCT--CTGATCGATCGCGTTATTGCGATATGT----TCTGT-AATCAT-ATCA 157
                       *    *** *    ********* ******* *  ** *     **** ****** ****

consensus_11595#0      ACAATTCTGGAGTTAAGCATATGCCGTTAGCTCGAGTTTGAGGGATCGTGTGCTCCTGTC 857
consensus_11595#2      ACAATTTTGGGGTTAAGCATATGCC----------------------------------- 644
consensus_11595#1      ACA-TTCTGGAGTTAAGCATATCCGTTAGCTCGAGTTTGAGGGATCGTCGNGCTCCNGTC 650
consensus_11595#3      ACAATTCTGGAGTTAAGCATATGCCGTTNGCTCGAGTTTGAGGGATCGTGTGCTCCTGTC 245
consensus_11595#4      ACAATTCTGGAGTTAAGCATATGCCGTTAGCTCGAAAAAAAAAAAAAAA----------- 206
                       *** ** *** *********** *                                    

consensus_11595#0      TCGAGTTTTACCTGATGCAACGACTTTATGCAAATAGTAGGATGAAATTAATGCTCGTCA 917
consensus_11595#2      ------------------------------------------------------------
consensus_11595#1      TCGAGTTTTACCNGAAAA------------------------------------------ 668
consensus_11595#3      TCGNGTTTTNCCTGATGCNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 305
consensus_11595#4      ------------------------------------------------------------
                                                                                   

consensus_11595#0      ACGTAAGTT 926
consensus_11595#2      ---------
consensus_11595#1      ---------
consensus_11595#3      AA------- 307
consensus_11595#4      ---------