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Oryza sativa
cluster # 11605 cluster # 11605       Sequences # 9       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11605#0 length = 3003 sequences # 5  
consensus_11605#1 length = 832 sequences # 1  
 consensus_11605#2 length = 793 sequences # 1  
consensus_11605#3 length = 479 sequences # 1  
consensus_11605#4 length = 435 sequences # 1  
consensusID : consensus_11605#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3003
fasta sequence 
                              [TCTTGATTTGTCCAGTCTATCTTCCATCTTAAAGACTATATTGGAGTGCAGCATGACAGAGCGGATGCGTGTTTCTGTTGCAGAGTTAATATTACAATATCATGATTTCTTCCCCCAGCTAGTGAATCTTTTTAGAACGTGTGAGAGTTCAGGAAACATGGGTGCACTCCACATGATCTTTAGATTAGTAAAGGGAATCATATTGTTGAACAGTTCTGCGATATATGACAAGATTTTCTCTGATGATTTTATTCTTGAGATAATAGGCGCACTTGAATATGATCCAGAGGCTCGCACTGTGCAAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTTCAAGGAGGCTATACCCATTAAAAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAATAGGCTATATAAAGGATGTTATATTACCAAGAGTACTTGATGATTCTACCATGGCAAGCATTGCTGCAATCATTCATGCGAACAATGCTGCTGTTGTTTGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTTTGCTAAGATGAGATCTTCGAATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTTGCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAGGGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAGGATAAAGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTTACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCTTCTGGTTCAAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAATTTTGAAGATTCTGATGGATGGATTTGCTACAAATATGCCTACAAACTATAGAGGAGTTATTGATGTTTTTCATGAAAAGCATCTTGATAAGTTGATTGATGTAATAGCATTGGCTTCCTCCCCTATGGACATTACCCAATCAACATCTAGTCCAGTTGGTGTGGGTACAAGAGTTGAAAACCATTCTGTGAAGACTGAAATACTGTCTAACATCTGCGAGCTTTTATGCTTTTGTGTAGTTCATCACCCCTACAAGATCAAGGTCAACTTTTTAAGAAGCAATTCCGTGGAGAAAATCCTTACTTTAACCCATAGGAGAGAGAAGGTTTTGGTCGTGGCAGCCGTCCGATTCATGAGGACTGTTATTGCTAGAAATGATGAGCTTCTTCTTAGCCATGTTATCAAGTTCAACTCATTGAAACCAATTATCGAGGTATTTGTTGAAAATGGGGATAGGTACAACATGCTACATTCTGTTGTCCTTGAACTGTTGGAATACATACGAAAGGTAACCTAGCGGGAGTTATTTGCCAATTGTTATAATGCTACATAATGTGCTGTCAGTTGATGCATTATTTGTACAGGAAAATCTCAATTCACTTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGTGAGGTTCGAAAAACTAGGGAGCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGAGAGTGGTGAAACAACACAAAGTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAGAGGTCTCGACAAAGAAGAGGAGGACTATTTCAACAAGGGCAGTGATGAGGAAGATTCTGATAAACAGACATCATATGCACAGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACATCCGTCATATCCCTGCAAGGTACATTATCTCATCTTCTATAACTTGCGATAACTTCCTGCCAACTCATATTGAAGATTTATTTACTGGCTTCTTCTTCTTTATATTCATAATAACTTGTTACGTTTTACATTCTGTGCGCACATTATGCAATTTCTGGACTCTAAAACATACTTCAGTTCCAGTGTTTAGCAGATCTTTTGTTTTTTCAGGTCTAAATCTGGTGGGCTTGTGGATTATGACGACGATGATGAGGGTTACAACCCACCTCCCAAAAGGGCTGTTAAAGCTGATGAGGATGATGAGGCCTTAGTCATAAAGCGTAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCC--AAAAAACCAAAGATGGAACCCAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGTGGCAGGCAGACGCTCGAATTTGGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCACGAAAACTTCTGAAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACAACATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCAGGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTATTCAGTGAGATGACAATAAATATTTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCCTTGCGACGAAAAGGAATTGCTTCACATTTGGCTCCGAAGAAGGTCGTTGAATCCATAGCATTCTGACCCTCGAGCCAGCAAGCATGGTCGGAGGTGAGATAGTT-TTGG-TCA-AAGTTGTATATCTCAACCGCGATTTCGGCTC-AGCTGAACATGTAAATTGACACTCAAAGAGAAGAATACCAAGCTGAGAACCAACATGCCATTTGGTGCTGCACTATAGACAAAAAGGAGAGGGTCTTGCTGTTTTAGCTTTCGCCTAAAGATTAATGTGAGCTCTCTCACGGGCACAGAATGTGCCCTTCGATTGGACTATTTACATCTCTTATTTTTAA-TCAGCCTATGGGATGATCCACTAAGCTGTCACTCATGTAACAGAACCATTTTACAACAGCTTGAAGTATCTTACCCAAAAACCCCCACTTACACGGTAACAAATTCTTGGTATCCTGTATATACTAATGTGGACCATTGTCGGGCTAGTGGGAATGCATACATTTCACATG]

[+] EMBL AK119449             [TCTTGATTTGTCCAGTCTATCTTCCATCTTAAAGACTATATTGGAGTGCAGCATGACAGAGCGGATGCGTGTTTCTGTTGCAGAGTTAATATTACAATATCATGATTTCTTCCCCCAGCTAGTGAATCTTTTTAGAACGTGTGAGAGTTCAGGAAACATGGGTGCACTCCACATGATCTTTAGATTAGTAAAGGGAATCATATTGTTGAACAGTTCTGCGATATATGACAAGATTTTCTCTGATGATTTTATTCTTGAGATAATAGGCGCACTTGAATATGATCCAGAGGCTCGCACTGTGCAAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTTCAAGGAGGCTATACCCATTAAAAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAATAGGCTATATAAAGGATGTTATATTACCAAGAGTACTTGATGATTCTACCATGGCAAGCATTGCTGCAATCATTCATGCGAACAATGCTGCTGTTGTTTGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTTTGCTAAGATGAGATCTTCGAATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTTGCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAGGGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAGGATAAAGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTTACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCTTCTGGTTCAAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAATTTTGAAGATTCTGATGGATGGATTTGCTACAAATATGCCTACAAACTATAGAGGAGTTATTGATGTTTTTCATGAAAAGCATCTTGATAAGTTGATTGATGTAATAGCATTGGCTTCCTCCCCTATGGACATTACCCAATCAACATCTAGTCCAGTTGGTGTGGGTACAAGAGTTGAAAACCATTCTGTGAAGACTGAAATACTGTCTAACATCTGCGAGCTTTTATGCTTTTGTGTAGTTCATCACCCCTACAAGATCAAGGTCAACTTTTTAAGAAGCAATTCCGTGGAGAAAATCCTTACTTTAACCCATAGGAGAGAGAAGGTTTTGGTCGTGGCAGCCGTCCGATTCATGAGGACTGTTATTGCTAGAAATGATGAGCTTCTTCTTAGCCATGTTATCAAGTTCAACTCATTGAAACCAATTATCGAGGTATTTGTTGAAAATGGGGATAGGTACAACATGCTACATTCTGTTGTCCTTGAACTGTTGGAATACATACGAAAGGTAACCTAGCGGGAGTTATTTGCCAATTGTTATAATGCTACATAATGTGCTGTCAGTTGATGCATTATTTGTACAGGAAAATCTCAATTCACTTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGTGAGGTTCGAAAAACTAGGGAGCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGAGAGTGGTGAAACAACACAAAGTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAGAGGTCTCGACAAAGAAGAGGAGGACTATTTCAACAAGGGCAGTGATGAGGAAGATTCTGATAAACAGACATCATATGCACAGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACATCCGTCATATCCCTGCAAGGTACATTATCTCATCTTCTATAACTTGCGATAACTTCCTGCCAACTCATATTGAAGATTTATTTACTGGCTTCTTCTTCTTTATATTCATAATAACTTGTTACGTTTTACATTCTGTGCGCACATTATGCAATTTCTGGACTCTAAAACATACTTCAGTTCCAGTGTTTAGCAGATCTTTTGTTTTTTCAGGTCTAAATCTGGTGGGCTTGTGGATTATGACGACGATGATGAGGGTTACAACCCACCTCCCAAAAGGGCTGTTAAAGCTGATGAGGATGATGAGGCCTTAGTCATAAAGCGTAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCC  AAAAAACCAAAGATGGAACCCAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGTGGCAGGCAGACGCTCGAATTTGGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCACGAAAACTTCTGAAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACAACATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCAGGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTATTCAGTGAGATGACAATAAATATTTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCCTTGCGACGAAAAGGAATTGCTTCACATTTGGCTCCGAAGAAGGTCGTTGAATCCATAGCATTCTGACCCTCGAGCCAGCAAGCATGGTCGGAGGTGAGATAGTT TTGG TCA AAGTTGTATATCTCAACCGCGATTTCGGCTC AGCTGAACATGTAAATTGACACTCAAAGAGAAGAATACCAAGCTGAGAACCAACATGCCATTTGGTGCTGCACTATAGACAAAAAGGAGAGGGTC                                                                                                                                                                                                                                                                           ]
[+] EMBL CB638337             [                                                                                                                                                                                                                                                                                                                                      AGCATGTAGTTTTCAAGGAGGCTATACCCATTAAAAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAATAGGCTATATAAAGGATGTTATATTACCAAGAGTACTTGATGATTCTACCATGGCAAGCATTGCTGCAATCATTCATGCGAACAATGCTGCTGTTGTTTGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTTTGCTAAGATGAGATCTTCGAATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTTGCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAGGGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAAGATAAAGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTTACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCTTCTGGTTCAAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAATTTTGAAGATTCTGATGGATGGATTTGCTACAAATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB639064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGCCTTAGTCATAAAGCGTAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCCAAAAAAAACCAAAGATGGAACCCAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGTGGCAGGCAGACGCTCGAATTTGGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCACGAAAACTTCTGAAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACAACATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCAGGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTATTCAGTGAGATGACAATAAATATTTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCCTTGCGACGAAAAGGAATTGCTTCACATTTGGCTCCGAAGAAGGTCGTTGAATCCATAGCATTCTGACCCTCGAGCCAGCAAGCATGGTCGGAGGTGAGATAGTT TTGG TCA AAGTTGTATATCTCAACCGCGA TTCGGCTC AGCTGAACATGTAAATTGACAATCAAAGAGAAGAATACCAAGCTGAGAACCA                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB628729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGGAGGAAGGCCCAGGTTCTCAGAATCTACAACATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCAGGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTATTCAGTGAGATGACAATAAATA TTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCCTTGCGACGAAAAGGAATTGCTTCACATTTGGCTCCGAAGAAGGTCGTTGAATCCATAGCATTTTGACCCTCGAGCCAGCAAGCATGGTCGGAGGTGAGATAGTT TTGG TCA AAGTTGTATATCTCAACCGCGATTTCGGCTC AGCTGAACATGTAAATTGACACTCAAAGAGAAGAATACCAAGCTGAGAACCAACATGCCATTTGGTGCTGCACTATAGACAAAAAGGAGAGGGTCTTGCTGTTTTAGCTTTCGCCTAAAGATTAATGTGAGCTCTCTCACGGGCACAGAATGTGCCCTTCGATTGGACTATTTACATCTCTTATTTTTAA TCAGCCTATGGGATGATCCACTAAGCTGTCACTCATGTAACAGAACCATTTTACAACAGCTTGAAGTATCTTACCCAAAAACCCCCACTTACACGGTAACAAATTCTTGGTATCCTGTATATACTAATGTGGACCATTGTCGGGCTAGTGGGAATGCATACATTTCACATG]
[+] EMBL BI804942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAC TTTGGCTCCGAAGAAGGTCGTTGAATCCATAGCATTCTGACCCTCGAGCCAGCAAGCATGGTCGGAGGTGAGATAGTTCTTGGCTCACAAGTTGTATATCTCCACCGCGATTTCGGCTCGAGCTGAACATGTAAATTGACACTCAAAGAGAAGAATACCAAGCTGAGAACCCACATGCCATTTGGTGCTGCACTATAGACCAAAAGGAGAGGGTCTTGCTGTTTTAGCTTCCGCCTAAAGATCAATGTGAGCTCTCTCACGGGCACAGAATGTGCCCTTCGATTGGACTATTTACATCTCTTATTTTTAACTCAGCCTATGGGATGATCCACTAAGCTGTCACTCATGTAACAGAACCATTTTACAACAGCTTGAAGTATCTTGCTCAAAACCCCCCATTTACACGGTAAAAAAaaaa                                                                ]




>consensus_11605#0
TCTTGATTTGTCCAGTCTATCTTCCATCTTAAAGACTATATTGGAGTGCAGCATGACAGA
GCGGATGCGTGTTTCTGTTGCAGAGTTAATATTACAATATCATGATTTCTTCCCCCAGCT
AGTGAATCTTTTTAGAACGTGTGAGAGTTCAGGAAACATGGGTGCACTCCACATGATCTT
TAGATTAGTAAAGGGAATCATATTGTTGAACAGTTCTGCGATATATGACAAGATTTTCTC
TGATGATTTTATTCTTGAGATAATAGGCGCACTTGAATATGATCCAGAGGCTCGCACTGT
GCAAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTTCAAGGAGGCTATACCCATTAA
AAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAATAGGCTATATAAAGGATGT
TATATTACCAAGAGTACTTGATGATTCTACCATGGCAAGCATTGCTGCAATCATTCATGC
GAACAATGCTGCTGTTGTTTGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTT
TGCTAAGATGAGATCTTCGAATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTT
GCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAG
GGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAGGATAA
AGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTT
ACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCT
TCTGGTTCAAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAAT
TTTGAAGATTCTGATGGATGGATTTGCTACAAATATGCCTACAAACTATAGAGGAGTTAT
TGATGTTTTTCATGAAAAGCATCTTGATAAGTTGATTGATGTAATAGCATTGGCTTCCTC
CCCTATGGACATTACCCAATCAACATCTAGTCCAGTTGGTGTGGGTACAAGAGTTGAAAA
CCATTCTGTGAAGACTGAAATACTGTCTAACATCTGCGAGCTTTTATGCTTTTGTGTAGT
TCATCACCCCTACAAGATCAAGGTCAACTTTTTAAGAAGCAATTCCGTGGAGAAAATCCT
TACTTTAACCCATAGGAGAGAGAAGGTTTTGGTCGTGGCAGCCGTCCGATTCATGAGGAC
TGTTATTGCTAGAAATGATGAGCTTCTTCTTAGCCATGTTATCAAGTTCAACTCATTGAA
ACCAATTATCGAGGTATTTGTTGAAAATGGGGATAGGTACAACATGCTACATTCTGTTGT
CCTTGAACTGTTGGAATACATACGAAAGGTAACCTAGCGGGAGTTATTTGCCAATTGTTA
TAATGCTACATAATGTGCTGTCAGTTGATGCATTATTTGTACAGGAAAATCTCAATTCAC
TTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGTGAGGTTCGAAAAACTAGGGA
GCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGAGAGTGGTGAAACAACACAAA
GTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAGAGGTCTCGACAAAGAAGAGG
AGGACTATTTCAACAAGGGCAGTGATGAGGAAGATTCTGATAAACAGACATCATATGCAC
AGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACATCCGTCATATCCCTGCAAGGT
ACATTATCTCATCTTCTATAACTTGCGATAACTTCCTGCCAACTCATATTGAAGATTTAT
TTACTGGCTTCTTCTTCTTTATATTCATAATAACTTGTTACGTTTTACATTCTGTGCGCA
CATTATGCAATTTCTGGACTCTAAAACATACTTCAGTTCCAGTGTTTAGCAGATCTTTTG
TTTTTTCAGGTCTAAATCTGGTGGGCTTGTGGATTATGACGACGATGATGAGGGTTACAA
CCCACCTCCCAAAAGGGCTGTTAAAGCTGATGAGGATGATGAGGCCTTAGTCATAAAGCG
TAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCCAAAAAACCAAAGATGGAACC
CAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGTGGCAGGCAGACGCTCGAATTT
GGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCACGAAAACTTCTGAAGGCAATGG
TGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACAACATGACCCAGGAAGCTTGGA
TTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCAGGGAACTCGCCTTCCGAGAT
GACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTATTCAGTGAGATGACAATAAAT
ATTTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCCTTGCGACGAAAAGGAATTGC
TTCACATTTGGCTCCGAAGAAGGTCGTTGAATCCATAGCATTCTGACCCTCGAGCCAGCA
AGCATGGTCGGAGGTGAGATAGTTTTGGTCAAAGTTGTATATCTCAACCGCGATTTCGGC
TCAGCTGAACATGTAAATTGACACTCAAAGAGAAGAATACCAAGCTGAGAACCAACATGC
CATTTGGTGCTGCACTATAGACAAAAAGGAGAGGGTCTTGCTGTTTTAGCTTTCGCCTAA
AGATTAATGTGAGCTCTCTCACGGGCACAGAATGTGCCCTTCGATTGGACTATTTACATC
TCTTATTTTTAATCAGCCTATGGGATGATCCACTAAGCTGTCACTCATGTAACAGAACCA
TTTTACAACAGCTTGAAGTATCTTACCCAAAAACCCCCACTTACACGGTAACAAATTCTT
GGTATCCTGTATATACTAATGTGGACCATTGTCGGGCTAGTGGGAATGCATACATTTCAC
ATG

consensusID : consensus_11605#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence 
                              [TCATGATTTCTTCCCCCAGCTAGTGAATCTTTTTAGAACGTGTGAGAGTTCAGGAAACATGGATGCACTCCACATGATCTTTAGATTAGTAAAGGGAATCATATTGTTGAACAGTTCTGCGATATATGACAAGATTTTCTCTGATGATTTTATTCTTGAGATAATAGGCGCACTTGAATATGATCCAGAGGCTCGCACTGTGCAAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTTCAAGGAGGCTATACCCATTAAAAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAATAGGCTATATAAAGGATGTTATATTACCAAGAGTACTTGATGATTCTACCATGGCAAGCATTGCTGCAATCATTCATGCGAACAATGCTGCTATTATGTGATTCTCCTGTAGGTTGTTTGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTTTGCTAAGATGAGATCTTCGAATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTTGCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAGGGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAGGATAAAGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTTACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCTTCTGGTTNCAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAATTTTGAGATTCT]

[+] EMBL CB678950             [TCATGATTTCTTCCCCCAGCTAGTGAATCTTTTTAGAACGTGTGAGAGTTCAGGAAACATGGATGCACTCCACATGATCTTTAGATTAGTAAAGGGAATCATATTGTTGAACAGTTCTGCGATATATGACAAGATTTTCTCTGATGATTTTATTCTTGAGATAATAGGCGCACTTGAATATGATCCAGAGGCTCGCACTGTGCAAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTTCAAGGAGGCTATACCCATTAAAAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAATAGGCTATATAAAGGATGTTATATTACCAAGAGTACTTGATGATTCTACCATGGCAAGCATTGCTGCAATCATTCATGCGAACAATGCTGCTATTATGTGATTCTCCTGTAGGTTGTTTGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTTTGCTAAGATGAGATCTTCGAATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTTGCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAGGGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAGGATAAAGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTTACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCTTCTGGTTNCAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAATTTTGAGATTCT]




>consensus_11605#1
TCATGATTTCTTCCCCCAGCTAGTGAATCTTTTTAGAACGTGTGAGAGTTCAGGAAACAT
GGATGCACTCCACATGATCTTTAGATTAGTAAAGGGAATCATATTGTTGAACAGTTCTGC
GATATATGACAAGATTTTCTCTGATGATTTTATTCTTGAGATAATAGGCGCACTTGAATA
TGATCCAGAGGCTCGCACTGTGCAAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTT
CAAGGAGGCTATACCCATTAAAAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAG
AATAGGCTATATAAAGGATGTTATATTACCAAGAGTACTTGATGATTCTACCATGGCAAG
CATTGCTGCAATCATTCATGCGAACAATGCTGCTATTATGTGATTCTCCTGTAGGTTGTT
TGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTTTGCTAAGATGAGATCTTCG
AATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTTGCTTGAGTTTTGTACTCTC
ACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAGGGATCTTGCTAGTGAAGGT
GTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAGGATAAAGTGCTCGTCTCAGCTGGG
ACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTTACTGAGATCATATATTGCT
CGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCTTCTGGTTNCAGGCATGGTA
ACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAATTTTGAGATTCT

consensusID : consensus_11605#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 793
fasta sequence 
                              [AAATCTGCCTACAAACTATAGAGGAGTTATTGATGTTTTTCATGAAAAGCATCTTGATAAGTTGATTGATGTAATAGCCTTGGCTTCCTCCCCTATGGACATTACCCAATCAACATCTAGTCCAGTTGGTGTGGGTACAAGAGTTGAAAACCATTCTGTGAAGACTGAAATACTGTCTAACATCTGCGAGCTTTTATGCTTTTGTGTAGTTCATCACCCCTACAAGATCAAGGTCAACTTTTTAAGAAGCAATTCCGTGGAGAAAATCCTTACTTTAACCCATAGGAGAGAGAAGGTTTTGGTCGTGGCAGCCGTCCGATTCATGAGGACTGTTATTGCTAGAAATGATGAGCTTCTTCTTAGCCATGTTATCAAGTTCAACTCATTGAAACCAATTATCGAGGTATTTGTTGAAAATGGGGATAGGTACAACATGCTACATTCTGTTGTCCTTGAACTGTTGGAATACATACGAAAGGAAAATCTCAATTCACTTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGTGAGGTTCGAAAAACTAGGGAGCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGAGAGTGGTGAAACAACACAAAGTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAGAGGTCTCGACAAAGAAGAGGAGGACTATTTCAACAANGGCAGTGATGAGGAAGATTCTGATAAACAGACATCATATGCACAGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACATCCGTCATATCCCTGCAAGG]

[+] EMBL CB684683             [AAATCTGCCTACAAACTATAGAGGAGTTATTGATGTTTTTCATGAAAAGCATCTTGATAAGTTGATTGATGTAATAGCCTTGGCTTCCTCCCCTATGGACATTACCCAATCAACATCTAGTCCAGTTGGTGTGGGTACAAGAGTTGAAAACCATTCTGTGAAGACTGAAATACTGTCTAACATCTGCGAGCTTTTATGCTTTTGTGTAGTTCATCACCCCTACAAGATCAAGGTCAACTTTTTAAGAAGCAATTCCGTGGAGAAAATCCTTACTTTAACCCATAGGAGAGAGAAGGTTTTGGTCGTGGCAGCCGTCCGATTCATGAGGACTGTTATTGCTAGAAATGATGAGCTTCTTCTTAGCCATGTTATCAAGTTCAACTCATTGAAACCAATTATCGAGGTATTTGTTGAAAATGGGGATAGGTACAACATGCTACATTCTGTTGTCCTTGAACTGTTGGAATACATACGAAAGGAAAATCTCAATTCACTTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGTGAGGTTCGAAAAACTAGGGAGCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGAGAGTGGTGAAACAACACAAAGTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAGAGGTCTCGACAAAGAAGAGGAGGACTATTTCAACAANGGCAGTGATGAGGAAGATTCTGATAAACAGACATCATATGCACAGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACATCCGTCATATCCCTGCAAGG]




>consensus_11605#2
AAATCTGCCTACAAACTATAGAGGAGTTATTGATGTTTTTCATGAAAAGCATCTTGATAA
GTTGATTGATGTAATAGCCTTGGCTTCCTCCCCTATGGACATTACCCAATCAACATCTAG
TCCAGTTGGTGTGGGTACAAGAGTTGAAAACCATTCTGTGAAGACTGAAATACTGTCTAA
CATCTGCGAGCTTTTATGCTTTTGTGTAGTTCATCACCCCTACAAGATCAAGGTCAACTT
TTTAAGAAGCAATTCCGTGGAGAAAATCCTTACTTTAACCCATAGGAGAGAGAAGGTTTT
GGTCGTGGCAGCCGTCCGATTCATGAGGACTGTTATTGCTAGAAATGATGAGCTTCTTCT
TAGCCATGTTATCAAGTTCAACTCATTGAAACCAATTATCGAGGTATTTGTTGAAAATGG
GGATAGGTACAACATGCTACATTCTGTTGTCCTTGAACTGTTGGAATACATACGAAAGGA
AAATCTCAATTCACTTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGTGAGGTT
CGAAAAACTAGGGAGCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGAGAGTGG
TGAAACAACACAAAGTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAGAGGTCT
CGACAAAGAAGAGGAGGACTATTTCAACAANGGCAGTGATGAGGAAGATTCTGATAAACA
GACATCATATGCACAGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACATCCGTCA
TATCCCTGCAAGG

consensusID : consensus_11605#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence 
                              [TTTCGGCGTCAGCTGGAACAATGTGAAATTGGACAACTCAAAAGAGAAGAATACCAAGCTGGAGATACCAAACAATGGCCATTTGGGTCCTGGCAACTATAGACACAAAAGGAGAGGNTCTTGGCTGTGTTTGAGCTGTTCGCCCTANAAGATTGAATCGTGGAGCTCTTCTCACCGGGGCACAAGAATGGTGCCCTTGCGATTGGGACTATTGTGACAATGCTGCTTATTGTGTTGAATGCAAGCCTAATGGGGATGGATGCCAACCTGAAGCTGTCACTGCATGGTAACAAGAACCATGTGTTGACAACAGCTTGAAGTGATGCTTGACCCCAGAAACCCCCACTTACACCGTGAACAAATTGCTTGGTATCCTGTATATACTAATGTGGACCATTGTCGGCTTTTGGAATCCATACACTTTCACACTGATTTTGATGGAAACAGCTTGGAACATATGAAATTCATACGAAAAAAAA]

[+] EMBL BM419012             [TTTCGGCGTCAGCTGGAACAATGTGAAATTGGACAACTCAAAAGAGAAGAATACCAAGCTGGAGATACCAAACAATGGCCATTTGGGTCCTGGCAACTATAGACACAAAAGGAGAGGNTCTTGGCTGTGTTTGAGCTGTTCGCCCTANAAGATTGAATCGTGGAGCTCTTCTCACCGGGGCACAAGAATGGTGCCCTTGCGATTGGGACTATTGTGACAATGCTGCTTATTGTGTTGAATGCAAGCCTAATGGGGATGGATGCCAACCTGAAGCTGTCACTGCATGGTAACAAGAACCATGTGTTGACAACAGCTTGAAGTGATGCTTGACCCCAGAAACCCCCACTTACACCGTGAACAAATTGCTTGGTATCCTGTATATACTAATGTGGACCATTGTCGGCTTTTGGAATCCATACACTTTCACACTGATTTTGATGGAAACAGCTTGGAACATATGAAATTCATACGAAAAAAAA]




>consensus_11605#3
TTTCGGCGTCAGCTGGAACAATGTGAAATTGGACAACTCAAAAGAGAAGAATACCAAGCT
GGAGATACCAAACAATGGCCATTTGGGTCCTGGCAACTATAGACACAAAAGGAGAGGNTC
TTGGCTGTGTTTGAGCTGTTCGCCCTANAAGATTGAATCGTGGAGCTCTTCTCACCGGGG
CACAAGAATGGTGCCCTTGCGATTGGGACTATTGTGACAATGCTGCTTATTGTGTTGAAT
GCAAGCCTAATGGGGATGGATGCCAACCTGAAGCTGTCACTGCATGGTAACAAGAACCAT
GTGTTGACAACAGCTTGAAGTGATGCTTGACCCCAGAAACCCCCACTTACACCGTGAACA
AATTGCTTGGTATCCTGTATATACTAATGTGGACCATTGTCGGCTTTTGGAATCCATACA
CTTTCACACTGATTTTGATGGAAACAGCTTGGAACATATGAAATTCATACGAAAAAAAA

consensusID : consensus_11605#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence 
                              [AATTCGGCACGAGGAAAGCGTAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCCAAAAAAACCAAAGATGGAACCCAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGTGGCAGGCAGACGCTCGAATTCGGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCACGAAAACTTCTGAAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACAACATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCAGGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTATTCAGTGAGATGACAATAAATATTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCCTTGCGNNNNNNNNNN]

[+] EMBL CF195965             [AATTCGGCACGAGGAAAGCGTAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCCAAAAAAACCAAAGATGGAACCCAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGTGGCAGGCAGACGCTCGAATTCGGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCACGAAAACTTCTGAAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACAACATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCAGGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTATTCAGTGAGATGACAATAAATATTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCCTTGCGNNNNNNNNNN]




>consensus_11605#4
AATTCGGCACGAGGAAAGCGTAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCC
AAAAAAACCAAAGATGGAACCCAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGT
GGCAGGCAGACGCTCGAATTCGGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCAC
GAAAACTTCTGAAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACA
ACATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGC
AGGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTA
TTCAGTGAGATGACAATAAATATTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCC
TTGCGNNNNNNNNNN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11605#0      TCTTGATTTGTCCAGTCTATCTTCCATCTTAAAGACTATATTGGAGTGCAGCATGACAGA 60
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GCGGATGCGTGTTTCTGTTGCAGAGTTAATATTACAATATCATGATTTCTTCCCCCAGCT 120
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AGTGAATCTTTTTAGAACGTGTGAGAGTTCAGGAAACATGGGTGCACTCCACATGATCTT 180
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TAGATTAGTAAAGGGAATCATATTGTTGAACAGTTCTGCGATATATGACAAGATTTTCTC 240
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TGATGATTTTATTCTTGAGATAATAGGCGCACTTGAATATGATCCAGAGGCTCGCACTGT 300
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GCAAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTTCAAGGAGGCTATACCCATTAA 360
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAATAGGCTATATAAAGGATGT 420
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TATATTACCAAGAGTACTTGATGATTCTACCATGGCAAGCATTGCTGCAATCATTCATGC 480
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GAACAATGCTGCTGTTGTTTGTTTACTCAAGGACGATGCTTCTTTTGTAAAAGAACTGTT 540
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TGCTAAGATGAGATCTTCGAATATTTCTGCTGAATCAAAACGCGAACTGGTCCTGTTTTT 600
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCTATCTAG 660
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAGTCAGGATAA 720
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGATCCTAACTT 780
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      ACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCACTTCTTGGTCT 840
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TCTGGTTCAAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAATTTCTGGAAAT 900
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TTTGAAGATTCTGATGGATGGATTTGCTACAAATATGCCTACAAACTATAGAGGAGTTA- 959
consensus_11605#2      ------------------------------AAATCTGCCTACAAACTATAGAGGAGTTA- 29
consensus_11605#4      -------------------------------AATTCGGC-----ACGAGGAAAGCGTAA- 23
consensus_11605#1      --------------------------TCATGATTTCTTCCCCCAGCTAGTGAATCTTTT- 33
consensus_11605#3      --------------------------------TTTCGGCGTC-AGCTGGAACAATGTGAA 27
                                                        *    *      *          *   

consensus_11605#0      --TTGATGTTTTTCATGAAAAGCATCTTGATA-AGTTGATTGATGTAATAGCATTGGCTT 1016
consensus_11605#2      --TTGATGTTTTTCATGAAAAGCATCTTGATA-AGTTGATTGATGTAATAGCCTTGGCTT 86
consensus_11605#4      --TCCAG----TGGATGACAAACAAGCTGATG-GGAGGTCTCCCAAAAAAACCAAAGATG 76
consensus_11605#1      --TAGAA----CGTGTGAGAGTTCAGGAAACATGGATGCACTCCACATGATCTTTAGATT 87
consensus_11605#3      ATTGGACAACTCAAAAGAGAAGAATACCAAGCTGGAGATACCAAACAATGGCC----ATT 83
                         *  *          ** *         *    *           *    *      * 

consensus_11605#0      -CCTCCCCTATGGACATTACCCAATCAACATCTAGTCCAGTTGGTGTGG-GTACAAGAGT 1074
consensus_11605#2      -CCTCCCCTATGGACATTACCCAATCAACATCTAGTCCAGTTGGTGTGG-GTACAAGAGT 144
consensus_11605#4      -GAACCCAGATTTAT-CTGCTCAAAGATTGTC-GCTGCGGCTAGTGTGGCAGGCAGACGC 133
consensus_11605#1      AGTAAAGGGAATCATATTGTTGAACAGTTCTGCGATATATGACAAGATTTTCTCTGATGA 147
consensus_11605#3      TGGGTCCTGGCAACTATAGACACAAAAGGAGAGGNTCTTGGCTGTGTTTGAGCTGTTCGC 143
                                              *           *         *            * 

consensus_11605#0      TGAAAACCATTCTGTGAAGACTGAAATACTGTCTAACATCTGCGAGCTTTTATGCTTTTG 1134
consensus_11605#2      TGAAAACCATTCTGTGAAGACTGAAATACTGTCTAACATCTGCGAGCTTTTATGCTTTTG 204
consensus_11605#4      TCGAATTCGGCAGATAAA--CAGGGTCCCCATCCACCTTCCTCAAGCACGAAAACTTCTG 191
consensus_11605#1      TTTTATTCTTGAGATAAT--AGGCGCACTTGAATATGATCCAGAGGCTCGCA---CTGTG 202
consensus_11605#3      CCTANAAGATTGAATCGT---GGAGCTCTTCTCACCGGGGCACAAGAATG-GTGCCCTTG 199
                                     *       *                      *            **

consensus_11605#0      TGTAGTTCATCACCCC-TACAAGATCAAGGTCAACTTTTTAAGAAG-CAATTCC-GTGGA 1191
consensus_11605#2      TGTAGTTCATCACCCC-TACAAGATCAAGGTCAACTTTTTAAGAAG-CAATTCC-GTGGA 261
consensus_11605#4      --AAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAAT-CTACAAC-ATGAC 247
consensus_11605#1      C-AAAATCATCGCACTTTCCTGAAGGAGCATGTAGTTTTCAAGGAGGCTATACCCATTAA 261
consensus_11605#3      C---GATTGGGACTAT-TGTGACAATGCTGCTTATTGTGTT-GAATGCAAGCCTAATGGG 254
                                        *     *         *   *    * *  * *      *   

consensus_11605#0      --GAAAATCCTTACTTTAA----CCCATAGGAGAGAGAAGGTTTTGGTCGTGGCAGCCGT 1245
consensus_11605#2      --GAAAATCCTTACTTTAA----CCCATAGGAGAGAGAAGGTTTTGGTCGTGGCAGCCGT 315
consensus_11605#4      CCAGGAAGCTTGGATTCCA----CTCATCAAAATGGAGA-----TGACTGTACCAAA--- 295
consensus_11605#1      AAATGCTTCTGTGGTTTCAAAGATTCATCAAACATACAGAAT--AGGCTATATAAAG--- 316
consensus_11605#3      GATGGATGCCAACCTGAAGCTGTCACTGCATGGTAACAAGAACCATGTGTTGACAAC--- 311
                               *     *          *                        *   *     

consensus_11605#0      CCGATTCATGAGGACTGTTATTGCTAGA-AATGATGAGCTTCTTCTTAGCCA-TGTTATC 1303
consensus_11605#2      CCGATTCATGAGGACTGTTATTGCTAGA-AATGATGAGCTTCTTCTTAGCCA-TGTTATC 373
consensus_11605#4      --GATGCA-GGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCA 352
consensus_11605#1      --GATGTTATATTACCAAGAGTACTTGATGATTCTA---CCATGGCAAGCAT-TGCTGCA 370
consensus_11605#3      --AGCTTGAAGTGATGCTTGACCCCAGAAACCCCCACTTACACCGTGAACAAATTGCTTG 369
                                    *         *  **                   * *   *      

consensus_11605#0      AAGTTCAACTC--ATTGAAACCAATTATCGAGGTATTTGTTGAAAATGGGGA-TAGGTAC 1360
consensus_11605#2      AAGTTCAACTC--ATTGAAACCAATTATCGAGGTATTTGTTGAAAATGGGGA-TAGGTAC 430
consensus_11605#4      GAGCCTTATTC--AGTGAGAT-GACAATAAATATTTTTTTCCTCTATTGGCT-TCAAGTC 408
consensus_11605#1      ATCATTCATGCG-AACAATGCTGCTATTATGTGATTCTCCTGTAGGTTGTTTGTTTACTC 429
consensus_11605#3      GTATCCTGTATATACTAATGTGGACCATTGTCGGCTTT--TGGAATCCATACACTTTCAC 427
                                    *   *         *       * *                     *

consensus_11605#0      AACATGCTACATTCTGTTGTCCTTGAACTGTTGGAATACATACGAAAGGTAACCTAGCGG 1420
consensus_11605#2      AACATGCTACATTCTGTTGTCCTTGAACTGTTGGAATACATACGAAAGG----------- 479
consensus_11605#4      GAT-TGCTTTTCCTTGCGNNNNNNNNNN-------------------------------- 435
consensus_11605#1      AAGGACGATGCTTCTTTTGTAAAAGAACTGTTTGCTAAGATGAGATCTTCGAA------- 482
consensus_11605#3      ACTGATTTTGATGGAAACAGCTTGGAACATATGAAATTCATACGAAAAAAAA-------- 479
                                                                                   

consensus_11605#0      GAGTTATTTGCCAATTGTTATAATGCTACATAATGTGCTGTCAGTTGATGCATTATTTGT 1480
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      --------------------------TATTTCTGCTGAATCAAAACGCGAACTGGTCCTG 516
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      ACAGGAAAATCTCAATTCACTTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGT 1540
consensus_11605#2      -----AAAATCTCAATTCACTTGTGATACATGTTACCAAATCCTTTTGGGACCAACTTGT 534
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      TTTTTGCTTGAGTTTTGTACTCTCACTAAAAGTTTGCAGGCTGTTCAGCAATTACGTCT- 575
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GAGGTTCGAAAAACTAGGGAGCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGA 1600
consensus_11605#2      GAGGTTCGAAAAACTAGGGAGCATTCAGGCCTTTAAACTCAAGTATCAACAGTTAATGGA 594
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ---ATCTAGGGATCTTGCTAGTGAAGGTGTGTTTGACATCATGTCTGATGTGTTGCAGAG 632
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GAGTGGTGAAACAACACAAAGTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAG 1660
consensus_11605#2      GAGTGGTGAAACAACACAAAGTATTAGTCTAGTTGACATGAGAAAGAAGCCAGAAGAAAG 654
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      TCAGGATAAAGTGCTCGTCTCAGCTGGGACAGACATCCTTGTATATTTTCTTAATCAAGA 692
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AGGTCTCGACAAAGAAGAGGAGGACTATTTCAACAAGGGCAGTGATGAGGAAGATTCTGA 1720
consensus_11605#2      AGGTCTCGACAAAGAAGAGGAGGACTATTTCAACAANGGCAGTGATGAGGAAGATTCTGA 714
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      --TCCTAACTTACTGAGATCATATATTGCTCGTCAAGAAAATTCTCAAGAAGGAAATTCA 750
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TAAACAGACATCATATGCACAGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACAT 1780
consensus_11605#2      TAAACAGACATCATATGCACAGAAGGAATCTTTGGATAAGTTACCCAAGGGAAGTGACAT 774
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      CTTCTTGGTCTTCTGGTTNCAGGCATGGTAACTGACTTTGGTGAGGGAATGCACTGTCAA 810
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      CCGTCATATCCCTGCAAGGTACATTATCTCATCTTCTATAACTTGCGATAACTTCCTGCC 1840
consensus_11605#2      CCGTCATATCCCTGCAAGG----------------------------------------- 793
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      TTTCTGGAAATTTTGAGATTCT-------------------------------------- 832
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AACTCATATTGAAGATTTATTTACTGGCTTCTTCTTCTTTATATTCATAATAACTTGTTA 1900
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      CGTTTTACATTCTGTGCGCACATTATGCAATTTCTGGACTCTAAAACATACTTCAGTTCC 1960
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AGTGTTTAGCAGATCTTTTGTTTTTTCAGGTCTAAATCTGGTGGGCTTGTGGATTATGAC 2020
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GACGATGATGAGGGTTACAACCCACCTCCCAAAAGGGCTGTTAAAGCTGATGAGGATGAT 2080
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GAGGCCTTAGTCATAAAGCGTAATCCAGTGGATGACAAACAAGCTGATGGGAGGTCTCCC 2140
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AAAAAACCAAAGATGGAACCCAGATTTATCTGCTCAAAGATTGTCGCTGCGGCTAGTGTG 2200
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GCAGGCAGACGCTCGAATTTGGCAGATAAACAGGGTCCCCATCCACCTTCCTCAAGCACG 2260
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      AAAACTTCTGAAGGCAATGGTGATGTAGGGGAGGAAGGCCCAGGTTCTCAGAATCTACAA 2320
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      CATGACCCAGGAAGCTTGGATTCCACTCATCAAAATGGAGATGACTGTACCAAAGATGCA 2380
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      GGGAACTCGCCTTCCGAGATGACTGTAAATACATCAAAAGCAACTGATTCAGAGCCTTAT 2440
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TCAGTGAGATGACAATAAATATTTTTTTTCCTCTATTGGCTTCAAGTCGATTGCTTTTCC 2500
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TTGCGACGAAAAGGAATTGCTTCACATTTGGCTCCGAAGAAGGTCGTTGAATCCATAGCA 2560
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TTCTGACCCTCGAGCCAGCAAGCATGGTCGGAGGTGAGATAGTTTTGGTCAAAGTTGTAT 2620
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      ATCTCAACCGCGATTTCGGCTCAGCTGAACATGTAAATTGACACTCAAAGAGAAGAATAC 2680
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      CAAGCTGAGAACCAACATGCCATTTGGTGCTGCACTATAGACAAAAAGGAGAGGGTCTTG 2740
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      CTGTTTTAGCTTTCGCCTAAAGATTAATGTGAGCTCTCTCACGGGCACAGAATGTGCCCT 2800
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TCGATTGGACTATTTACATCTCTTATTTTTAATCAGCCTATGGGATGATCCACTAAGCTG 2860
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TCACTCATGTAACAGAACCATTTTACAACAGCTTGAAGTATCTTACCCAAAAACCCCCAC 2920
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TTACACGGTAACAAATTCTTGGTATCCTGTATATACTAATGTGGACCATTGTCGGGCTAG 2980
consensus_11605#2      ------------------------------------------------------------
consensus_11605#4      ------------------------------------------------------------
consensus_11605#1      ------------------------------------------------------------
consensus_11605#3      ------------------------------------------------------------
                                                                                   

consensus_11605#0      TGGGAATGCATACATTTCACATG 3003
consensus_11605#2      -----------------------
consensus_11605#4      -----------------------
consensus_11605#1      -----------------------
consensus_11605#3      -----------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)