cluster # 11606

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Oryza sativa
cluster # 11606 cluster # 11606 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11606#0 length = 1707 sequences # 1
consensus_11606#1 length = 1382 sequences # 4

consensus_11606#2 length = 756 sequences # 1
consensus_11606#3 length = 671 sequences # 1
consensus_11606#4 length = 390 sequences # 2

consensusID : consensus_11606#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1707
fasta sequence

                              [CCACCCGCCGGCACACCGCCCTGTCCGCCGCCATCCCCTCCTCCTCGTCACGGCAATGGGGCTCTTCCAGCGGCGGCCGCCCTCTCCGCCGCCTTCCCCGGGCGAGTACCCCGGTTGCGGCGCGCGCGCGGGGGGTTAGGGGAGGAGCAAAACCAACGCCGTCGTGGAGGTCACCATCGATAAGGTCAGGGCGCGCCCGCCCCGACGGCGCTTCCCCCCGTCCGCGTCCGCCTCCGCCCTGGGATCGAGGGTCGCAGCCCCTGTGAGCTCAAGGGCGCCGCCGTGGCCAAGATCCAAGGCAGGCGCTCGCCCCCACGACTCCATGCGCTTCAGCAAAAATTCTTGTTTCGTATTTTGTTGTATAAGGTTGAAGTCTATGTATACATACGCATTTGCCTAAACTGGTTGGCGGAGAACTGTGGAATTTATTCAAATAATTCAGTTTGTGATACATTATCAAGGGTGTAGGTAGAAATTCCTGGCTGCTTTTTTTGTTCATCCGAAACCTTGGAGATAAAAACGGCCATTTGGAGGATCTCAATAGTTTCCCTTTCAAAAAATTATAGCTCTTACTATTGGTGGACACATGTGGATCTGTAAACTAGAGAGCACCAGAATTGCACAGCAGTTCAGACTTCACTTGATTCAGCTACCATTGCTACACAACTCAGGCCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACACAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGAAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGGTACTATTGAGTCATTTTTCTTACTCATGTGCAAGAATATTTTTTTTTCCTTACACAACTCTGATCTCAAGTCCCAACGCCTCTCCTAGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATTTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAAGGGATTCAAGATGTTGATTCAGGGGTGGTGTTGGAGATGGAAGTGATTCGATTCCTTGATCCGGCAACCCTGGTTTCCTGTTTCAAACTCAGAAATTCTTAAGAATGTTTGTAGATCATAGAAGCCTTTCCTGCTCCTGCTAGCTGTAACCGGTTTTGTATCTGTAACAGCAGTAAACTAAACTCGCAATATGAACTTACAATTATAAT]

[+] EMBL AK071323             [CCACCCGCCGGCACACCGCCCTGTCCGCCGCCATCCCCTCCTCCTCGTCACGGCAATGGGGCTCTTCCAGCGGCGGCCGCCCTCTCCGCCGCCTTCCCCGGGCGAGTACCCCGGTTGCGGCGCGCGCGCGGGGGGTTAGGGGAGGAGCAAAACCAACGCCGTCGTGGAGGTCACCATCGATAAGGTCAGGGCGCGCCCGCCCCGACGGCGCTTCCCCCCGTCCGCGTCCGCCTCCGCCCTGGGATCGAGGGTCGCAGCCCCTGTGAGCTCAAGGGCGCCGCCGTGGCCAAGATCCAAGGCAGGCGCTCGCCCCCACGACTCCATGCGCTTCAGCAAAAATTCTTGTTTCGTATTTTGTTGTATAAGGTTGAAGTCTATGTATACATACGCATTTGCCTAAACTGGTTGGCGGAGAACTGTGGAATTTATTCAAATAATTCAGTTTGTGATACATTATCAAGGGTGTAGGTAGAAATTCCTGGCTGCTTTTTTTGTTCATCCGAAACCTTGGAGATAAAAACGGCCATTTGGAGGATCTCAATAGTTTCCCTTTCAAAAAATTATAGCTCTTACTATTGGTGGACACATGTGGATCTGTAAACTAGAGAGCACCAGAATTGCACAGCAGTTCAGACTTCACTTGATTCAGCTACCATTGCTACACAACTCAGGCCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACACAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGAAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGGTACTATTGAGTCATTTTTCTTACTCATGTGCAAGAATATTTTTTTTTCCTTACACAACTCTGATCTCAAGTCCCAACGCCTCTCCTAGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATTTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAAGGGATTCAAGATGTTGATTCAGGGGTGGTGTTGGAGATGGAAGTGATTCGATTCCTTGATCCGGCAACCCTGGTTTCCTGTTTCAAACTCAGAAATTCTTAAGAATGTTTGTAGATCATAGAAGCCTTTCCTGCTCCTGCTAGCTGTAACCGGTTTTGTATCTGTAACAGCAGTAAACTAAACTCGCAATATGAACTTACAATTATAAT]




>consensus_11606#0
CCACCCGCCGGCACACCGCCCTGTCCGCCGCCATCCCCTCCTCCTCGTCACGGCAATGGG
GCTCTTCCAGCGGCGGCCGCCCTCTCCGCCGCCTTCCCCGGGCGAGTACCCCGGTTGCGG
CGCGCGCGCGGGGGGTTAGGGGAGGAGCAAAACCAACGCCGTCGTGGAGGTCACCATCGA
TAAGGTCAGGGCGCGCCCGCCCCGACGGCGCTTCCCCCCGTCCGCGTCCGCCTCCGCCCT
GGGATCGAGGGTCGCAGCCCCTGTGAGCTCAAGGGCGCCGCCGTGGCCAAGATCCAAGGC
AGGCGCTCGCCCCCACGACTCCATGCGCTTCAGCAAAAATTCTTGTTTCGTATTTTGTTG
TATAAGGTTGAAGTCTATGTATACATACGCATTTGCCTAAACTGGTTGGCGGAGAACTGT
GGAATTTATTCAAATAATTCAGTTTGTGATACATTATCAAGGGTGTAGGTAGAAATTCCT
GGCTGCTTTTTTTGTTCATCCGAAACCTTGGAGATAAAAACGGCCATTTGGAGGATCTCA
ATAGTTTCCCTTTCAAAAAATTATAGCTCTTACTATTGGTGGACACATGTGGATCTGTAA
ACTAGAGAGCACCAGAATTGCACAGCAGTTCAGACTTCACTTGATTCAGCTACCATTGCT
ACACAACTCAGGCCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAG
TGACAGTAGCACAGCACATTCATTTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTG
AGCTCTCACACAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATA
CGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGG
ATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGAAACACAAATTG
GAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTA
GTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGGTACTATT
GAGTCATTTTTCTTACTCATGTGCAAGAATATTTTTTTTTCCTTACACAACTCTGATCTC
AAGTCCCAACGCCTCTCCTAGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAA
GAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCT
TCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAG
TAGGTTGCAATTTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATG
AAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCAC
CAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAAGG
GATTCAAGATGTTGATTCAGGGGTGGTGTTGGAGATGGAAGTGATTCGATTCCTTGATCC
GGCAACCCTGGTTTCCTGTTTCAAACTCAGAAATTCTTAAGAATGTTTGTAGATCATAGA
AGCCTTTCCTGCTCCTGCTAGCTGTAACCGGTTTTGTATCTGTAACAGCAGTAAACTAAA
CTCGCAATATGAACTTACAATTATAAT

consensusID : consensus_11606#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1382
fasta sequence

                              [TAGCTCGCCTCTCGTCTCCGCGTCACTGAAATTCCCCACCCACGCATCGCACCGCACGTCGCCGCGCCGCCGCCGCCGGCGGGCTGCCCTCCCCTTCTCCGTCTCCGTCCCCGTATCCGGCCATCCTCCCCATCCATCCGCCGTGCTGCTGCCTGCTATAGCGCCCCTAGGCCGGCAGCCCGCCAAACGCTGCCCCAGCCACGCAGCCAGCCGGCTAGCCAACTTCGCTCCCGGCGACAGGGCCGCAGCGGTTGCAGGTTGCTTCTTCAATGGCAGGTTCGGAGGATTTGAGCGGTTTGACAGCTTCCCTTGGAGAGTTACACGTTGAATCATCAGCTCTGAAGGACAGTGAAATTTCTCATCCTGGCAATGCGTTTGATGATGATGCTATCGCTGATGATGATGTATGGGATGATGTTTCGGATTCTCCTGGTCATGGATCCACATTAGACAGAGAGTGGGCTCACAGGCAGAACCAGTTTCATAAGATGGGATACAGGGATGGTATAGCTGAAGGACAGAAGGACATTGCCCAAGAGGGCTTCAATGTTGGGTTTGGGCAATCTGTGCATGTTGGCTATAAGTGGGGACTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCAGACAACTTGAAGGAAAAGATGTTCCCCAATGTCCAGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGAACATTGA-GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTT-GGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATGTATGA-CAGTTGCATT-GTAACTTTGCATCTTCTGGTTCCAGGAAGTGTTACTTTTTTATCAATTGAGAAGGTTCGAGCCACTCCTGAATGTTG]

[+] EMBL AK119473             [TAGCTCGCCTCTCGTCTCCGCGTCACTGAAATTCCCCACCCACGCATCGCACCGCACGTCGCCGCGCCGCCGCCGCCGGCGGGCTGCCCTCCCCTTCTCCGTCTCCGTCCCCGTATCCGGCCATCCTCCCCATCCATCCGCCGTGCTGCTGCCTGCTATAGCGCCCCTAGGCCGGCAGCCCGCCAAACGCTGCCCCAGCCACGCAGCCAGCCGGCTAGCCAACTTCGCTCCCGGCGACAGGGCCGCAGCGGTTGCAGGTTGCTTCTTCAATGGCAGGTTCGGAGGATTTGAGCGGTTTGACAGCTTCCCTTGGAGAGTTACACGTTGAATCATCAGCTCTGAAGGACAGTGAAATTTCTCATCCTGGCAATGCGTTTGATGATGATGCTATCGCTGATGATGATGTATGGGATGATGTTTCGGATTCTCCTGGTCATGGATCCACATTAGACAGAGAGTGGGCTCACAGGCAGAACCAGTTTCATAAGATGGGATACAGGGATGGTATAGCTGAAGGACAGAAGGACATTGCCCAAGAGGGCTTCAATGTTGGGTTTGGGCAATCTGTGCATGTTGGCTATAAGTGGGGACTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCAGACAACTTGAAGGAAAAGATGTTCCCCAATGTCCAGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGAACATTGA GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTT GGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATGTATGA CAGTTGCATT GTAACTTTGCATCTTCTGGTTCCAGGAAGTGTTAC                                          ]
[-] EMBL CF326581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAAAGATGTTCCCCAATGTCCAGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGAACATTGA GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAAAAAAAAaaaaaaac                                                                                                                                                                                                 ]
[+] EMBL CA753108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATTGA GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTTGGGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATGTATGACCGGTTGCATTGGTACCTTTGCATCTTCTGGTCCCAGGAAGTGTTACTTTTTTATCAATTGAGAAGGTTCGAGCCACTCCTGAATGTTG]
[+] EMBL AY189692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAGGGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTT GGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATG                                                                                              ]




>consensus_11606#1
TAGCTCGCCTCTCGTCTCCGCGTCACTGAAATTCCCCACCCACGCATCGCACCGCACGTC
GCCGCGCCGCCGCCGCCGGCGGGCTGCCCTCCCCTTCTCCGTCTCCGTCCCCGTATCCGG
CCATCCTCCCCATCCATCCGCCGTGCTGCTGCCTGCTATAGCGCCCCTAGGCCGGCAGCC
CGCCAAACGCTGCCCCAGCCACGCAGCCAGCCGGCTAGCCAACTTCGCTCCCGGCGACAG
GGCCGCAGCGGTTGCAGGTTGCTTCTTCAATGGCAGGTTCGGAGGATTTGAGCGGTTTGA
CAGCTTCCCTTGGAGAGTTACACGTTGAATCATCAGCTCTGAAGGACAGTGAAATTTCTC
ATCCTGGCAATGCGTTTGATGATGATGCTATCGCTGATGATGATGTATGGGATGATGTTT
CGGATTCTCCTGGTCATGGATCCACATTAGACAGAGAGTGGGCTCACAGGCAGAACCAGT
TTCATAAGATGGGATACAGGGATGGTATAGCTGAAGGACAGAAGGACATTGCCCAAGAGG
GCTTCAATGTTGGGTTTGGGCAATCTGTGCATGTTGGCTATAAGTGGGGACTTGTTCGTG
GGATTACCAGTGCATTAGCTAGTCTCCCAGACAACTTGAAGGAAAAGATGTTCCCCAATG
TCCAGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAAATTTCAGCAGAAG
ACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAG
ATGCAACATTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTG
TGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCAT
AAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGT
GTCGAATTTCAGTTTGCTGAACATTGAGGAAGATGGTGATTCAGGGGTGTTGTTGGAGAT
GGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCT
TAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAG
GTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCT
AACTCGCAGTATGCACACACACATTTCACTAGAACTTTGGCAGATGCTAAGATGATAACT
TCCTGAATATCTTCTGCAGAAAGTCTGATGTATGACAGTTGCATTGTAACTTTGCATCTT
CTGGTTCCAGGAAGTGTTACTTTTTTATCAATTGAGAAGGTTCGAGCCACTCCTGAATGT
TG

consensusID : consensus_11606#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 756
fasta sequence

                              [CCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACGCAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGGAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATGTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAGGGGATTCAAGATGNTGATTC]

[+] EMBL CA765337             [CCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACGCAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGGAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATGTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAGGGGATTCAAGATGNTGATTC]




>consensus_11606#2
CCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCAC
AGCACATTCATTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACGCAG
TTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGC
CTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACC
AGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGGAACACAAATTGGAACTGCAGAATT
TGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAAT
TGATACTCACCTGCCAAATACATATATTCCTTGGGCATGACAGCTTGAAAGAAAAATTGG
ACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGAT
GTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAA
GAGAGCTACAGATTCCAGTAGGTTGCAATGTCTCTCAGAGGATGTTGCGATGCTGTGTTG
CATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGG
CAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCA
GTTTGCTTAACATCAGGGGATTCAAGATGNTGATTC

consensusID : consensus_11606#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [ACAAGGGGGCTTCAACGTTGGGTTTGGGCAATCTGTGCATGTTGGCTGTAAGTGGGGTCTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCTGACAGCTTGAAAGAAAAATTGTTGCCCAATGTCCAGTGCAGAGGGCAACTTCAAGAACTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCCCTTCAGGTGTTTCATGAGAGCATTTTTTAGAGTAGCCCTTTATCAGAGGAACCAGATGCAACCTTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGCGAAGAACTGAGAGGAGGTTTATAAACAAGTTGGGGGAATTAAAGTTTGGTGTATGACAGTTGCATTGTAACTTTGCATTTTTTGGTTCCAGGAAGTGTACTCACTTTTTTATCAATTGAGAAGTTTGACAGCTCATGTCAGTAAGTGGGCCGCTTTTATTACATGTGGTTGGTGCGATTGGTGCATCAAGCTCAGCACCTCTTTTTGACATGTTCCAGGTTGGTGAGAACATCAACACTTCTATCCGTTGCATGTTGTGAGTGTTGGTTTTCAATATTAATGTCATTCATTCATGAATATTCATGATTGAAAAAAAAAAAAAAAA]

[-] EMBL CA760309             [ACAAGGGGGCTTCAACGTTGGGTTTGGGCAATCTGTGCATGTTGGCTGTAAGTGGGGTCTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCTGACAGCTTGAAAGAAAAATTGTTGCCCAATGTCCAGTGCAGAGGGCAACTTCAAGAACTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCCCTTCAGGTGTTTCATGAGAGCATTTTTTAGAGTAGCCCTTTATCAGAGGAACCAGATGCAACCTTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGCGAAGAACTGAGAGGAGGTTTATAAACAAGTTGGGGGAATTAAAGTTTGGTGTATGACAGTTGCATTGTAACTTTGCATTTTTTGGTTCCAGGAAGTGTACTCACTTTTTTATCAATTGAGAAGTTTGACAGCTCATGTCAGTAAGTGGGCCGCTTTTATTACATGTGGTTGGTGCGATTGGTGCATCAAGCTCAGCACCTCTTTTTGACATGTTCCAGGTTGGTGAGAACATCAACACTTCTATCCGTTGCATGTTGTGAGTGTTGGTTTTCAATATTAATGTCATTCATTCATGAATATTCATGATTGAAAAAAAAAAAAAAAA]




>consensus_11606#3
ACAAGGGGGCTTCAACGTTGGGTTTGGGCAATCTGTGCATGTTGGCTGTAAGTGGGGTCT
TGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCTGACAGCTTGAAAGAAAAATTGTT
GCCCAATGTCCAGTGCAGAGGGCAACTTCAAGAACTGAATAATTCTGTGCAAGAAATTTC
AGCAGAAGACGCCCTTCAGGTGTTTCATGAGAGCATTTTTTAGAGTAGCCCTTTATCAGA
GGAACCAGATGCAACCTTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAA
GGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGCGAAGAACTGAGAGG
AGGTTTATAAACAAGTTGGGGGAATTAAAGTTTGGTGTATGACAGTTGCATTGTAACTTT
GCATTTTTTGGTTCCAGGAAGTGTACTCACTTTTTTATCAATTGAGAAGTTTGACAGCTC
ATGTCAGTAAGTGGGCCGCTTTTATTACATGTGGTTGGTGCGATTGGTGCATCAAGCTCA
GCACCTCTTTTTGACATGTTCCAGGTTGGTGAGAACATCAACACTTCTATCCGTTGCATG
TTGTGAGTGTTGGTTTTCAATATTAATGTCATTCATTCATGAATATTCATGATTGAAAAA
AAAAAAAAAAA

consensusID : consensus_11606#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 390
fasta sequence

                              [ACAGATTCCACGTAGGTTGCAAGCCTCTCAAAGGATCTTGTGATGTTTTGTGTGCATGAATGCCCAGATGTGAAAGTTTAGCGAAGAAACCTGAGAGGGAGGTTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAGACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATCGAGGAAGATGGTGATTCAGGGGTCTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCACAACCATGATTTGCTGTTTCGAACAC-AAAGGCTTAAGCCTCAAGACCAGAAATTAATAAGAATGTAATTGTAAATCTTGTAACTAAGATTTCACTGATCATATAACCTTTCCTTTTCCTGCTAGATAAAAAAAAAA]

[+] EMBL BI810530             [ACAGATTCCACGTAGGTTGCAAGCCTCTCAAAGGATCTTGTGATGTTTTGTGTGCATGAATGCCCAGATGTGAAAGTTTAGCGAAGAAACCTGAGAGGGAGGTTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAGACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATCGAGGAAGATGGTGATTCAGGGGTCTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCACAACCATGATTTGCTGTTTCGAACAC AAAGGCTTAAGCCTCAAGACCAGAAATTAATAAGAATGTAATTGTAAATCTTGTAACTAAGATTTCACTGATCATATAACCTTTCCTTTTCCTGCTAGATAAAAAAAAAA]
[+] EMBL AA749553             [                                                                                                 GGAGGTTCATAAATAAGTTGGCGGAATTGTGAGCACTACCA ACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATCGAGGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCACAACCATGATTTGCTGTTTCGAACACAAAAGGCTTAAG                                                                                                   ]




>consensus_11606#4
ACAGATTCCACGTAGGTTGCAAGCCTCTCAAAGGATCTTGTGATGTTTTGTGTGCATGAA
TGCCCAGATGTGAAAGTTTAGCGAAGAAACCTGAGAGGGAGGTTCATAAACAAGTTGGCG
GAATTGTGAGCACTACCAGACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAG
TTTGCTGAACATCGAGGAAGATGGTGATTCAGGGGTCTTGTTGGAGATGGAAGCGATTCA
ATTCCTTGATCTCACAACCATGATTTGCTGTTTCGAACACAAAGGCTTAAGCCTCAAGAC
CAGAAATTAATAAGAATGTAATTGTAAATCTTGTAACTAAGATTTCACTGATCATATAAC
CTTTCCTTTTCCTGCTAGATAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      CCACCCGCCGGCACACCGCCCTGTCCGCCGCCATCCCCTCCTCCTCGTCACGGCAATGGG 60
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      GCTCTTCCAGCGGCGGCCGCCCTCTCCGCCGCCTTCCCCGGGCGAGTACCCCGGTTGCGG 120
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      CGCGCGCGCGGGGGGTTAGGGGAGGAGCAAAACCAACGCCGTCGTGGAGGTCACCATCGA 180
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      TAAGGTCAGGGCGCGCCCGCCCCGACGGCGCTTCCCCCCGTCCGCGTCCGCCTCCGCCCT 240
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      GGGATCGAGGGTCGCAGCCCCTGTGAGCTCAAGGGCGCCGCCGTGGCCAAGATCCAAGGC 300
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      AGGCGCTCGCCCCCACGACTCCATGCGCTTCAGCAAAAATTCTTGTTTCGTATTTTGTTG 360
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      TATAAGGTTGAAGTCTATGTATACATACGCATTTGCCTAAACTGGTTGGCGGAGAACTGT 420
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------------------------------------------------------------
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      GGAATTTATTCAAATAATTCAGTTTGTGATACATTATCAAGGGTGTAGGTAGAAATTCCT 480
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ------TAGCTCGCCTCTCGTCTCCGCGTCACTGAAATTCCCCACCCACGCATCGCACCG 54
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      GGCTGCTTTTTTTGTTCATCCGAAACCTTGGAGATAAAAACGGCCATTTGGAGGATCTCA 540
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      CACGTCGCCGCGCCGCCGCCGCCGGCGGGCTGCCCTCCCCTTCTCCGTCTCCGTCCCCGT 114
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      ATAGTTTCCCTTTCAAAAAATTATAGCTCTTACTATTGGTGGACACATGTGGATCTGTAA 600
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ATCCGGCCATCCTCCCCATCCATCCGCCGTGCTGCTGCCTGCTATAGCGCCCCTAGGCCG 174
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      ACTAGAGAGCACCAGAATTGCACAGCAGTTCAGACTTCACTTGATTCAGCTACCATTGCT 660
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      GCAGCCCGCCAAACGCTGCCCCAGCCACGCAGCCAGCCGGCTAGCCAACTTCGCTCCCGG 234
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      ACACAACTCAGGCCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAG 720
consensus_11606#2      ------------CCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAG 48
                                                                                   

consensus_11606#1      CGACAGGGCCGCAGCGGTTGCAGGTTGCTTCTTCAATGGCAGGTTCGGAGGATTTGAGCG 294
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      TGACAGTAGCACAGCACATTCATTTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTG 780
consensus_11606#2      TGACAGTAGCACAGCACATTCATTTTTTT-CTACAAGACAGAACACAAGAGATTTGGTTG 107
                                                                                   

consensus_11606#1      GTTTGACAGCTTCCCTTGGAGAGTTACACGTTGAATCATCAGCTCTGAAGGACAGTGAAA 354
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      AGCTCTCA--CACAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAA 838
consensus_11606#2      AGCTCTCA--CGCAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAA 165
                                                                                   

consensus_11606#1      TTTCTCATCCTGGCAATGCGTTTGATGATGATGCTATCGCTGATGATGATGTATGGGATG 414
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      TACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAA 898
consensus_11606#2      TACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAA 225
                                                                                   

consensus_11606#1      ATGTTTCGGATTCTCCTGGTCATGGATCCACATTAGACAGAGAGTGGGCTCACAGGCAGA 474
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      GGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGAAACACAAAT 958
consensus_11606#2      GGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGGAACACAAAT 285
                                                                                   

consensus_11606#1      ACCAGTTTCATAAGATGGGATACAGGGATGGTATAGCTGAAGGACAGAAGGACATTGCCC 534
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ----------------------------------------------------------AC 2
consensus_11606#0      TGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGT 1018
consensus_11606#2      TGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGT 345
                                                                                   

consensus_11606#1      AAGAGGGCTTCAATGTTGGGTTTGGGCAATCTGTGCATGTTGGCTATAAGTGGGGACTTG 594
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      AAGGGGGCTTCAACGTTGGGTTTGGGCAATCTGTGCATGTTGGCTGTAAGTGGGGTCTTG 62
consensus_11606#0      TAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGGTACTA 1078
consensus_11606#2      TAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATG------ 399
                                                                                   

consensus_11606#1      TTC-GTGGGATTACCAGTGCATTAGCTAG-----------TCTCCCAGACAACTTGAAGG 642
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      TTC-GTGGGATTACCAGTGCATTAGCTAG-----------TCTCCCTGACAGCTTGAAAG 110
consensus_11606#0      TTGAGTCATTTTTCTTACTCATGTGCAAGAATATTTTTTTTTCCTTACACAACTCTGATC 1138
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      AAAAGA-----------TGTTCCCCAATGTCCAGTGCAGA--GGACAACTCCAAGATCTG 689
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      AAAAAT-----------TGTTGCCCAATGTCCAGTGCAGA--GGGCAACTTCAAGAACTG 157
consensus_11606#0      TCAAGTCCCAACGCCTCTCCTAGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTG 1198
consensus_11606#2      -----------------------ACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTG 436
                                                                                   

consensus_11606#1      AATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATT 749
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      AATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCCCTTCAGGTGTTTCATGAGAGCATT 217
consensus_11606#0      AAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATT 1258
consensus_11606#2      AAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATT 496
                                                                                   

consensus_11606#1      CTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCC 809
consensus_11606#4      ---------------------------------------------------ACAGATTCC 9
consensus_11606#3      TTTTAGAGTAGCCCTTTATCAGAGGAACCAGATGCAACCTTAAAGAGAGCTACAGATTCC 277
consensus_11606#0      CTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCC 1318
consensus_11606#2      CTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCC 556
                                                                          *********

consensus_11606#1      A-GTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGA--TTTTGT-TGCATGAATGCCCAGA 865
consensus_11606#4      ACGTAGGTTGCAA-GCCTCTCAAAGGATCTTGTGATGTTTTGTGTGCATGAATGCCCAGA 68
consensus_11606#3      A-GTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGA--TTTTGT-TGCATGAATGCCCAGA 333
consensus_11606#0      A-GTAGGTTGCAATTTCTCTCAGAGGATGTTGCGATGCTGTGT-TGCATGAATGCCCAGA 1376
consensus_11606#2      A-GTAGGTTGCAATGTCTCTCAGAGGATGTTGCGATGCTGTGT-TGCATGAATGCCCAGA 614
                       * ***********   ****** ***** *** **   * *** ****************

consensus_11606#1      TGTGAAAGTT-AGTGAAGAA--TTGACAGG-AGATTCATAAACAAGTTGGCGGAATTGTG 921
consensus_11606#4      TGTGAAAGTTTAGCGAAGAAACCTGAGAGGGAGGTTCATAAACAAGTTGGCGGAATTGTG 128
consensus_11606#3      TGTGAAAGTT-AGCGAAGAA--CTGAGAGG-AGGTTTATAAACAAGTTGGGGGAATTAAA 389
consensus_11606#0      TATGAAAGAA-AGTGGAGAA--TTGACATG-AGATTCATAAACAGGTTGGCAGAATAGCA 1432
consensus_11606#2      TATGAAAGAA-AGTGGAGAA--TTGACATG-AGATTCATAAACAGGTTGGCAGAATAGCA 670
                       * ******   ** * ****   *** * * ** ** ******* *****  ****    

consensus_11606#1      AGCACTACCA-ATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGA 980
consensus_11606#4      AGCACTACCAGACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGA 188
consensus_11606#3      GTTTGGTGTATGACAGTTGCATTGTAACTTTGCATTTTTTGGTTCCAGGAAGTGTACTCA 449
consensus_11606#0      AGCACCACCA-ACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTA 1491
consensus_11606#2      AGCACCACCA-ACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTA 729
                                *   *   *     *     *  *   **            *** * ** *

consensus_11606#1      ACATTGAGGAAGATGGTGA-----TTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATT 1035
consensus_11606#4      ACATCGAGGAAGATGGTGA-----TTCAGGGGTCTTGTTGGAGATGGAAGCGATTCAATT 243
consensus_11606#3      CTTTTTTATCAATTGAGAAGT---TTGACAGCTCATGTCAGTAAGTGGGCCGCTTTTATT 506
consensus_11606#0      ACATCAAGGGATTCAAGATGTTGATTCAGGGGTGGTGTTGGAGATGGAAGTGATTCGATT 1551
consensus_11606#2      ACATCAGGGGATTCAAGATGNTGATTC--------------------------------- 756
                          *      *             **                                  

consensus_11606#1      CCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAG-AAGGCTTAATTAAGC-CTCA 1093
consensus_11606#4      CCTTGATCTCACAACCATGATTTGCTGTTTCGAACACA--AAGGCTTAA----GC-CTCA 296
consensus_11606#3      ACATG---TGGTTGGTGCGATT-GGTGCATCAAGCTCAGCACCTCTTTTTGACATGTTCC 562
consensus_11606#0      CCTTGATCCGGCAACCCTGGTTTCCTGTTTCAAACTCAGAAATTCTTAAGAATGT-TTGT 1610
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      AAGACCAAGAAATTATTAAGAATGTAATTG--TAAATCTTGTAACTA--AGGTTTCATTG 1149
consensus_11606#4      A-GACCA-GAAATTAATAAGAATGTAATTG--TAAATCTTGTAACTA--AGATTTCACTG 350
consensus_11606#3      AGGTTGGTGAGAACATCAACACTTCTATCCGTTGCATGTTGTGAGTGTTGGTTTTCAATA 622
consensus_11606#0      AGATCATAGAAGCCTTTCCTGCTCCTGCTAGCTGTAACCGGTTTTGTATCTGTAACAGCA 1670
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      ATCATATAAGCCTTTCCTT----TTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTC 1205
consensus_11606#4      ATCATATAA-CCTTTCCTT----TTCCTGCTAGATAAAAAAAAAA--------------- 390
consensus_11606#3      TTAATGTCATTCATTCATGAATATTCATGATTGAAAAAAAAAAAAAAAA----------- 671
consensus_11606#0      GTAAACTAAACTCGCAATATGAACTTACAATTATAAT----------------------- 1707
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      GCAGTATGCACACACACATTTCACTAGAACTTTGGCAGATGCTAAGATGATAACTTCCTG 1265
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      ------------------------------------------------------------
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      AATATCTTCTGCAGAAAGTCTGATGTATGACAGTTGCATTGTAACTTTGCATCTTCTGGT 1325
consensus_11606#4      ------------------------------------------------------------
consensus_11606#3      ------------------------------------------------------------
consensus_11606#0      ------------------------------------------------------------
consensus_11606#2      ------------------------------------------------------------
                                                                                   

consensus_11606#1      TCCAGGAAGTGTTACTTTTTTATCAATTGAGAAGGTTCGAGCCACTCCTGAATGTTG 1382
consensus_11606#4      ---------------------------------------------------------
consensus_11606#3      ---------------------------------------------------------
consensus_11606#0      ---------------------------------------------------------
consensus_11606#2      ---------------------------------------------------------