These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11606#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1707 fasta sequence [CCACCCGCCGGCACACCGCCCTGTCCGCCGCCATCCCCTCCTCCTCGTCACGGCAATGGGGCTCTTCCAGCGGCGGCCGCCCTCTCCGCCGCCTTCCCCGGGCGAGTACCCCGGTTGCGGCGCGCGCGCGGGGGGTTAGGGGAGGAGCAAAACCAACGCCGTCGTGGAGGTCACCATCGATAAGGTCAGGGCGCGCCCGCCCCGACGGCGCTTCCCCCCGTCCGCGTCCGCCTCCGCCCTGGGATCGAGGGTCGCAGCCCCTGTGAGCTCAAGGGCGCCGCCGTGGCCAAGATCCAAGGCAGGCGCTCGCCCCCACGACTCCATGCGCTTCAGCAAAAATTCTTGTTTCGTATTTTGTTGTATAAGGTTGAAGTCTATGTATACATACGCATTTGCCTAAACTGGTTGGCGGAGAACTGTGGAATTTATTCAAATAATTCAGTTTGTGATACATTATCAAGGGTGTAGGTAGAAATTCCTGGCTGCTTTTTTTGTTCATCCGAAACCTTGGAGATAAAAACGGCCATTTGGAGGATCTCAATAGTTTCCCTTTCAAAAAATTATAGCTCTTACTATTGGTGGACACATGTGGATCTGTAAACTAGAGAGCACCAGAATTGCACAGCAGTTCAGACTTCACTTGATTCAGCTACCATTGCTACACAACTCAGGCCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACACAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGAAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGGTACTATTGAGTCATTTTTCTTACTCATGTGCAAGAATATTTTTTTTTCCTTACACAACTCTGATCTCAAGTCCCAACGCCTCTCCTAGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATTTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAAGGGATTCAAGATGTTGATTCAGGGGTGGTGTTGGAGATGGAAGTGATTCGATTCCTTGATCCGGCAACCCTGGTTTCCTGTTTCAAACTCAGAAATTCTTAAGAATGTTTGTAGATCATAGAAGCCTTTCCTGCTCCTGCTAGCTGTAACCGGTTTTGTATCTGTAACAGCAGTAAACTAAACTCGCAATATGAACTTACAATTATAAT] [+] EMBL AK071323 [CCACCCGCCGGCACACCGCCCTGTCCGCCGCCATCCCCTCCTCCTCGTCACGGCAATGGGGCTCTTCCAGCGGCGGCCGCCCTCTCCGCCGCCTTCCCCGGGCGAGTACCCCGGTTGCGGCGCGCGCGCGGGGGGTTAGGGGAGGAGCAAAACCAACGCCGTCGTGGAGGTCACCATCGATAAGGTCAGGGCGCGCCCGCCCCGACGGCGCTTCCCCCCGTCCGCGTCCGCCTCCGCCCTGGGATCGAGGGTCGCAGCCCCTGTGAGCTCAAGGGCGCCGCCGTGGCCAAGATCCAAGGCAGGCGCTCGCCCCCACGACTCCATGCGCTTCAGCAAAAATTCTTGTTTCGTATTTTGTTGTATAAGGTTGAAGTCTATGTATACATACGCATTTGCCTAAACTGGTTGGCGGAGAACTGTGGAATTTATTCAAATAATTCAGTTTGTGATACATTATCAAGGGTGTAGGTAGAAATTCCTGGCTGCTTTTTTTGTTCATCCGAAACCTTGGAGATAAAAACGGCCATTTGGAGGATCTCAATAGTTTCCCTTTCAAAAAATTATAGCTCTTACTATTGGTGGACACATGTGGATCTGTAAACTAGAGAGCACCAGAATTGCACAGCAGTTCAGACTTCACTTGATTCAGCTACCATTGCTACACAACTCAGGCCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACACAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGAAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGGTACTATTGAGTCATTTTTCTTACTCATGTGCAAGAATATTTTTTTTTCCTTACACAACTCTGATCTCAAGTCCCAACGCCTCTCCTAGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATTTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAAGGGATTCAAGATGTTGATTCAGGGGTGGTGTTGGAGATGGAAGTGATTCGATTCCTTGATCCGGCAACCCTGGTTTCCTGTTTCAAACTCAGAAATTCTTAAGAATGTTTGTAGATCATAGAAGCCTTTCCTGCTCCTGCTAGCTGTAACCGGTTTTGTATCTGTAACAGCAGTAAACTAAACTCGCAATATGAACTTACAATTATAAT] consensusID : consensus_11606#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1382 fasta sequence [TAGCTCGCCTCTCGTCTCCGCGTCACTGAAATTCCCCACCCACGCATCGCACCGCACGTCGCCGCGCCGCCGCCGCCGGCGGGCTGCCCTCCCCTTCTCCGTCTCCGTCCCCGTATCCGGCCATCCTCCCCATCCATCCGCCGTGCTGCTGCCTGCTATAGCGCCCCTAGGCCGGCAGCCCGCCAAACGCTGCCCCAGCCACGCAGCCAGCCGGCTAGCCAACTTCGCTCCCGGCGACAGGGCCGCAGCGGTTGCAGGTTGCTTCTTCAATGGCAGGTTCGGAGGATTTGAGCGGTTTGACAGCTTCCCTTGGAGAGTTACACGTTGAATCATCAGCTCTGAAGGACAGTGAAATTTCTCATCCTGGCAATGCGTTTGATGATGATGCTATCGCTGATGATGATGTATGGGATGATGTTTCGGATTCTCCTGGTCATGGATCCACATTAGACAGAGAGTGGGCTCACAGGCAGAACCAGTTTCATAAGATGGGATACAGGGATGGTATAGCTGAAGGACAGAAGGACATTGCCCAAGAGGGCTTCAATGTTGGGTTTGGGCAATCTGTGCATGTTGGCTATAAGTGGGGACTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCAGACAACTTGAAGGAAAAGATGTTCCCCAATGTCCAGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGAACATTGA-GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTT-GGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATGTATGA-CAGTTGCATT-GTAACTTTGCATCTTCTGGTTCCAGGAAGTGTTACTTTTTTATCAATTGAGAAGGTTCGAGCCACTCCTGAATGTTG] [+] EMBL AK119473 [TAGCTCGCCTCTCGTCTCCGCGTCACTGAAATTCCCCACCCACGCATCGCACCGCACGTCGCCGCGCCGCCGCCGCCGGCGGGCTGCCCTCCCCTTCTCCGTCTCCGTCCCCGTATCCGGCCATCCTCCCCATCCATCCGCCGTGCTGCTGCCTGCTATAGCGCCCCTAGGCCGGCAGCCCGCCAAACGCTGCCCCAGCCACGCAGCCAGCCGGCTAGCCAACTTCGCTCCCGGCGACAGGGCCGCAGCGGTTGCAGGTTGCTTCTTCAATGGCAGGTTCGGAGGATTTGAGCGGTTTGACAGCTTCCCTTGGAGAGTTACACGTTGAATCATCAGCTCTGAAGGACAGTGAAATTTCTCATCCTGGCAATGCGTTTGATGATGATGCTATCGCTGATGATGATGTATGGGATGATGTTTCGGATTCTCCTGGTCATGGATCCACATTAGACAGAGAGTGGGCTCACAGGCAGAACCAGTTTCATAAGATGGGATACAGGGATGGTATAGCTGAAGGACAGAAGGACATTGCCCAAGAGGGCTTCAATGTTGGGTTTGGGCAATCTGTGCATGTTGGCTATAAGTGGGGACTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCAGACAACTTGAAGGAAAAGATGTTCCCCAATGTCCAGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGAACATTGA GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTT GGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATGTATGA CAGTTGCATT GTAACTTTGCATCTTCTGGTTCCAGGAAGTGTTAC ] [-] EMBL CF326581 [ AAAAGATGTTCCCCAATGTCCAGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGAACATTGA GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAAAAAAAAaaaaaaac ] [+] EMBL CA753108 [ AAGAATTGACAGGAGATTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAATCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATTGA GGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTTGGGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATGTATGACCGGTTGCATTGGTACCTTTGCATCTTCTGGTCCCAGGAAGTGTTACTTTTTTATCAATTGAGAAGGTTCGAGCCACTCCTGAATGTTG] [+] EMBL AY189692 [ TGAGGGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAGAAGGCTTAATTAAGCCTCAAAGACCAAGAAATTATTAAGAATGTAATTGTAAATCTTGTAACTAAGGTTTCATTGATCATATAAGCCTTTCCTTTTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTCGCAGTATGCACACACACATTTCACTAGAACTTT GGCAGATGCTAAGATGATAACTTCCTGAATATCTTCTGCAGAAAGTCTGATG ] consensusID : consensus_11606#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 756 fasta sequence [CCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACGCAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGGAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATGTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAGGGGATTCAAGATGNTGATTC] [+] EMBL CA765337 [CCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAGTGACAGTAGCACAGCACATTCATTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTGAGCTCTCACGCAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAATACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAAGGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGGAACACAAATTGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGTTAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTGAAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATTCTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCCAGTAGGTTGCAATGTCTCTCAGAGGATGTTGCGATGCTGTGTTGCATGAATGCCCAGATATGAAAGAAAGTGGAGAATTGACATGAGATTCATAAACAGGTTGGCAGAATAGCAAGCACCACCAACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTAACATCAGGGGATTCAAGATGNTGATTC] consensusID : consensus_11606#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [ACAAGGGGGCTTCAACGTTGGGTTTGGGCAATCTGTGCATGTTGGCTGTAAGTGGGGTCTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCTGACAGCTTGAAAGAAAAATTGTTGCCCAATGTCCAGTGCAGAGGGCAACTTCAAGAACTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCCCTTCAGGTGTTTCATGAGAGCATTTTTTAGAGTAGCCCTTTATCAGAGGAACCAGATGCAACCTTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGCGAAGAACTGAGAGGAGGTTTATAAACAAGTTGGGGGAATTAAAGTTTGGTGTATGACAGTTGCATTGTAACTTTGCATTTTTTGGTTCCAGGAAGTGTACTCACTTTTTTATCAATTGAGAAGTTTGACAGCTCATGTCAGTAAGTGGGCCGCTTTTATTACATGTGGTTGGTGCGATTGGTGCATCAAGCTCAGCACCTCTTTTTGACATGTTCCAGGTTGGTGAGAACATCAACACTTCTATCCGTTGCATGTTGTGAGTGTTGGTTTTCAATATTAATGTCATTCATTCATGAATATTCATGATTGAAAAAAAAAAAAAAAA] [-] EMBL CA760309 [ACAAGGGGGCTTCAACGTTGGGTTTGGGCAATCTGTGCATGTTGGCTGTAAGTGGGGTCTTGTTCGTGGGATTACCAGTGCATTAGCTAGTCTCCCTGACAGCTTGAAAGAAAAATTGTTGCCCAATGTCCAGTGCAGAGGGCAACTTCAAGAACTGAATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCCCTTCAGGTGTTTCATGAGAGCATTTTTTAGAGTAGCCCTTTATCAGAGGAACCAGATGCAACCTTAAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGATTTTGTTGCATGAATGCCCAGATGTGAAAGTTAGCGAAGAACTGAGAGGAGGTTTATAAACAAGTTGGGGGAATTAAAGTTTGGTGTATGACAGTTGCATTGTAACTTTGCATTTTTTGGTTCCAGGAAGTGTACTCACTTTTTTATCAATTGAGAAGTTTGACAGCTCATGTCAGTAAGTGGGCCGCTTTTATTACATGTGGTTGGTGCGATTGGTGCATCAAGCTCAGCACCTCTTTTTGACATGTTCCAGGTTGGTGAGAACATCAACACTTCTATCCGTTGCATGTTGTGAGTGTTGGTTTTCAATATTAATGTCATTCATTCATGAATATTCATGATTGAAAAAAAAAAAAAAAA] consensusID : consensus_11606#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 390 fasta sequence [ACAGATTCCACGTAGGTTGCAAGCCTCTCAAAGGATCTTGTGATGTTTTGTGTGCATGAATGCCCAGATGTGAAAGTTTAGCGAAGAAACCTGAGAGGGAGGTTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAGACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATCGAGGAAGATGGTGATTCAGGGGTCTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCACAACCATGATTTGCTGTTTCGAACAC-AAAGGCTTAAGCCTCAAGACCAGAAATTAATAAGAATGTAATTGTAAATCTTGTAACTAAGATTTCACTGATCATATAACCTTTCCTTTTCCTGCTAGATAAAAAAAAAA] [+] EMBL BI810530 [ACAGATTCCACGTAGGTTGCAAGCCTCTCAAAGGATCTTGTGATGTTTTGTGTGCATGAATGCCCAGATGTGAAAGTTTAGCGAAGAAACCTGAGAGGGAGGTTCATAAACAAGTTGGCGGAATTGTGAGCACTACCAGACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATCGAGGAAGATGGTGATTCAGGGGTCTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCACAACCATGATTTGCTGTTTCGAACAC AAAGGCTTAAGCCTCAAGACCAGAAATTAATAAGAATGTAATTGTAAATCTTGTAACTAAGATTTCACTGATCATATAACCTTTCCTTTTCCTGCTAGATAAAAAAAAAA] [+] EMBL AA749553 [ GGAGGTTCATAAATAAGTTGGCGGAATTGTGAGCACTACCA ACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGAACATCGAGGAAGATGGTGATTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATTCCTTGATCTCACAACCATGATTTGCTGTTTCGAACACAAAAGGCTTAAG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 CCACCCGCCGGCACACCGCCCTGTCCGCCGCCATCCCCTCCTCCTCGTCACGGCAATGGG 60 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 GCTCTTCCAGCGGCGGCCGCCCTCTCCGCCGCCTTCCCCGGGCGAGTACCCCGGTTGCGG 120 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 CGCGCGCGCGGGGGGTTAGGGGAGGAGCAAAACCAACGCCGTCGTGGAGGTCACCATCGA 180 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 TAAGGTCAGGGCGCGCCCGCCCCGACGGCGCTTCCCCCCGTCCGCGTCCGCCTCCGCCCT 240 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 GGGATCGAGGGTCGCAGCCCCTGTGAGCTCAAGGGCGCCGCCGTGGCCAAGATCCAAGGC 300 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 AGGCGCTCGCCCCCACGACTCCATGCGCTTCAGCAAAAATTCTTGTTTCGTATTTTGTTG 360 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 TATAAGGTTGAAGTCTATGTATACATACGCATTTGCCTAAACTGGTTGGCGGAGAACTGT 420 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------------------------------------------------------------ consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 GGAATTTATTCAAATAATTCAGTTTGTGATACATTATCAAGGGTGTAGGTAGAAATTCCT 480 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ------TAGCTCGCCTCTCGTCTCCGCGTCACTGAAATTCCCCACCCACGCATCGCACCG 54 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 GGCTGCTTTTTTTGTTCATCCGAAACCTTGGAGATAAAAACGGCCATTTGGAGGATCTCA 540 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 CACGTCGCCGCGCCGCCGCCGCCGGCGGGCTGCCCTCCCCTTCTCCGTCTCCGTCCCCGT 114 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 ATAGTTTCCCTTTCAAAAAATTATAGCTCTTACTATTGGTGGACACATGTGGATCTGTAA 600 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ATCCGGCCATCCTCCCCATCCATCCGCCGTGCTGCTGCCTGCTATAGCGCCCCTAGGCCG 174 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 ACTAGAGAGCACCAGAATTGCACAGCAGTTCAGACTTCACTTGATTCAGCTACCATTGCT 660 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 GCAGCCCGCCAAACGCTGCCCCAGCCACGCAGCCAGCCGGCTAGCCAACTTCGCTCCCGG 234 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 ACACAACTCAGGCCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAG 720 consensus_11606#2 ------------CCGATGTCTATCTAACGTTGGATTGAAGTACAACAGCTTGCAGAACAG 48 consensus_11606#1 CGACAGGGCCGCAGCGGTTGCAGGTTGCTTCTTCAATGGCAGGTTCGGAGGATTTGAGCG 294 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 TGACAGTAGCACAGCACATTCATTTTTTTTCTACAAGACAGAACACAAGAGATTTGGTTG 780 consensus_11606#2 TGACAGTAGCACAGCACATTCATTTTTTT-CTACAAGACAGAACACAAGAGATTTGGTTG 107 consensus_11606#1 GTTTGACAGCTTCCCTTGGAGAGTTACACGTTGAATCATCAGCTCTGAAGGACAGTGAAA 354 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 AGCTCTCA--CACAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAA 838 consensus_11606#2 AGCTCTCA--CGCAGTTGACACTTGACAGTCCGGCTGCATATACAAGTTGCAATGTGCAA 165 consensus_11606#1 TTTCTCATCCTGGCAATGCGTTTGATGATGATGCTATCGCTGATGATGATGTATGGGATG 414 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 TACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAA 898 consensus_11606#2 TACGTAAGACCATGCCTCTTTGCAATCATTTATCCAGGACAGAATCAAGTAGTAGAAAAA 225 consensus_11606#1 ATGTTTCGGATTCTCCTGGTCATGGATCCACATTAGACAGAGAGTGGGCTCACAGGCAGA 474 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 GGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGAAACACAAAT 958 consensus_11606#2 GGATAAAGAGGCACCAGCATCTTCTGCTCCTGCCTTGAGAAATCTGGGAGGAACACAAAT 285 consensus_11606#1 ACCAGTTTCATAAGATGGGATACAGGGATGGTATAGCTGAAGGACAGAAGGACATTGCCC 534 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ----------------------------------------------------------AC 2 consensus_11606#0 TGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGT 1018 consensus_11606#2 TGGAACTGCAGAATTTGACGCTAACAAAGCCATTCAGGACATTACTTTTTTTTTTCATGT 345 consensus_11606#1 AAGAGGGCTTCAATGTTGGGTTTGGGCAATCTGTGCATGTTGGCTATAAGTGGGGACTTG 594 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 AAGGGGGCTTCAACGTTGGGTTTGGGCAATCTGTGCATGTTGGCTGTAAGTGGGGTCTTG 62 consensus_11606#0 TAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATGGTACTA 1078 consensus_11606#2 TAGTGATGGTGCAATTGATACTCACCTGCCAAATACATATATTCCTTGGGCATG------ 399 consensus_11606#1 TTC-GTGGGATTACCAGTGCATTAGCTAG-----------TCTCCCAGACAACTTGAAGG 642 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 TTC-GTGGGATTACCAGTGCATTAGCTAG-----------TCTCCCTGACAGCTTGAAAG 110 consensus_11606#0 TTGAGTCATTTTTCTTACTCATGTGCAAGAATATTTTTTTTTCCTTACACAACTCTGATC 1138 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 AAAAGA-----------TGTTCCCCAATGTCCAGTGCAGA--GGACAACTCCAAGATCTG 689 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 AAAAAT-----------TGTTGCCCAATGTCCAGTGCAGA--GGGCAACTTCAAGAACTG 157 consensus_11606#0 TCAAGTCCCAACGCCTCTCCTAGACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTG 1198 consensus_11606#2 -----------------------ACAGCTTGAAAGAAAAATTGGACAACTCCAAGACCTG 436 consensus_11606#1 AATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATT 749 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 AATAATTCTGTGCAAGAAATTTCAGCAGAAGACGCCCTTCAGGTGTTTCATGAGAGCATT 217 consensus_11606#0 AAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATT 1258 consensus_11606#2 AAGAACTCTGCGCAAGAAGTTTCATCAGATGACACACTTCAGATGTTTCATGAGAGCATT 496 consensus_11606#1 CTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTAAAGAGAGCTACAGATTCC 809 consensus_11606#4 ---------------------------------------------------ACAGATTCC 9 consensus_11606#3 TTTTAGAGTAGCCCTTTATCAGAGGAACCAGATGCAACCTTAAAGAGAGCTACAGATTCC 277 consensus_11606#0 CTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCC 1318 consensus_11606#2 CTTCAGAGTAGCCATTCATTAGAGGAACCACATGCAACACTAAAGAGAGCTACAGATTCC 556 ********* consensus_11606#1 A-GTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGA--TTTTGT-TGCATGAATGCCCAGA 865 consensus_11606#4 ACGTAGGTTGCAA-GCCTCTCAAAGGATCTTGTGATGTTTTGTGTGCATGAATGCCCAGA 68 consensus_11606#3 A-GTAGGTTGCAAAGCCTCTCAAAGGATCTTGTGA--TTTTGT-TGCATGAATGCCCAGA 333 consensus_11606#0 A-GTAGGTTGCAATTTCTCTCAGAGGATGTTGCGATGCTGTGT-TGCATGAATGCCCAGA 1376 consensus_11606#2 A-GTAGGTTGCAATGTCTCTCAGAGGATGTTGCGATGCTGTGT-TGCATGAATGCCCAGA 614 * *********** ****** ***** *** ** * *** **************** consensus_11606#1 TGTGAAAGTT-AGTGAAGAA--TTGACAGG-AGATTCATAAACAAGTTGGCGGAATTGTG 921 consensus_11606#4 TGTGAAAGTTTAGCGAAGAAACCTGAGAGGGAGGTTCATAAACAAGTTGGCGGAATTGTG 128 consensus_11606#3 TGTGAAAGTT-AGCGAAGAA--CTGAGAGG-AGGTTTATAAACAAGTTGGGGGAATTAAA 389 consensus_11606#0 TATGAAAGAA-AGTGGAGAA--TTGACATG-AGATTCATAAACAGGTTGGCAGAATAGCA 1432 consensus_11606#2 TATGAAAGAA-AGTGGAGAA--TTGACATG-AGATTCATAAACAGGTTGGCAGAATAGCA 670 * ****** ** * **** *** * * ** ** ******* ***** **** consensus_11606#1 AGCACTACCA-ATCCTATGTCTGGCCTAGTTGCTACTTGTGTCGAATTTCAGTTTGCTGA 980 consensus_11606#4 AGCACTACCAGACCCTATGTCTGGCCTAGTTGCTACTTGCGTCGAATTTCAGTTTGCTGA 188 consensus_11606#3 GTTTGGTGTATGACAGTTGCATTGTAACTTTGCATTTTTTGGTTCCAGGAAGTGTACTCA 449 consensus_11606#0 AGCACCACCA-ACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTA 1491 consensus_11606#2 AGCACCACCA-ACCCTATTGCCGGCAGAGTCTCTACTTGCATCGAATTGCAGTTTGCTTA 729 * * * * * * ** *** * ** * consensus_11606#1 ACATTGAGGAAGATGGTGA-----TTCAGGGGTGTTGTTGGAGATGGAAGCGATTCAATT 1035 consensus_11606#4 ACATCGAGGAAGATGGTGA-----TTCAGGGGTCTTGTTGGAGATGGAAGCGATTCAATT 243 consensus_11606#3 CTTTTTTATCAATTGAGAAGT---TTGACAGCTCATGTCAGTAAGTGGGCCGCTTTTATT 506 consensus_11606#0 ACATCAAGGGATTCAAGATGTTGATTCAGGGGTGGTGTTGGAGATGGAAGTGATTCGATT 1551 consensus_11606#2 ACATCAGGGGATTCAAGATGNTGATTC--------------------------------- 756 * * ** consensus_11606#1 CCTTGATCTCGCAACCCTGATTTGCTGTTTCAAACTCAG-AAGGCTTAATTAAGC-CTCA 1093 consensus_11606#4 CCTTGATCTCACAACCATGATTTGCTGTTTCGAACACA--AAGGCTTAA----GC-CTCA 296 consensus_11606#3 ACATG---TGGTTGGTGCGATT-GGTGCATCAAGCTCAGCACCTCTTTTTGACATGTTCC 562 consensus_11606#0 CCTTGATCCGGCAACCCTGGTTTCCTGTTTCAAACTCAGAAATTCTTAAGAATGT-TTGT 1610 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 AAGACCAAGAAATTATTAAGAATGTAATTG--TAAATCTTGTAACTA--AGGTTTCATTG 1149 consensus_11606#4 A-GACCA-GAAATTAATAAGAATGTAATTG--TAAATCTTGTAACTA--AGATTTCACTG 350 consensus_11606#3 AGGTTGGTGAGAACATCAACACTTCTATCCGTTGCATGTTGTGAGTGTTGGTTTTCAATA 622 consensus_11606#0 AGATCATAGAAGCCTTTCCTGCTCCTGCTAGCTGTAACCGGTTTTGTATCTGTAACAGCA 1670 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 ATCATATAAGCCTTTCCTT----TTCCTGCTAGATATAACCGGTTTTGTATCTCTAACTC 1205 consensus_11606#4 ATCATATAA-CCTTTCCTT----TTCCTGCTAGATAAAAAAAAAA--------------- 390 consensus_11606#3 TTAATGTCATTCATTCATGAATATTCATGATTGAAAAAAAAAAAAAAAA----------- 671 consensus_11606#0 GTAAACTAAACTCGCAATATGAACTTACAATTATAAT----------------------- 1707 consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 GCAGTATGCACACACACATTTCACTAGAACTTTGGCAGATGCTAAGATGATAACTTCCTG 1265 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 ------------------------------------------------------------ consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 AATATCTTCTGCAGAAAGTCTGATGTATGACAGTTGCATTGTAACTTTGCATCTTCTGGT 1325 consensus_11606#4 ------------------------------------------------------------ consensus_11606#3 ------------------------------------------------------------ consensus_11606#0 ------------------------------------------------------------ consensus_11606#2 ------------------------------------------------------------ consensus_11606#1 TCCAGGAAGTGTTACTTTTTTATCAATTGAGAAGGTTCGAGCCACTCCTGAATGTTG 1382 consensus_11606#4 --------------------------------------------------------- consensus_11606#3 --------------------------------------------------------- consensus_11606#0 --------------------------------------------------------- consensus_11606#2 --------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||