cluster # 11607

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Oryza sativa
cluster # 11607 cluster # 11607 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11607#0 length = 1288 sequences # 2
consensus_11607#1 length = 944 sequences # 4

consensus_11607#2 length = 677 sequences # 1
consensus_11607#3 length = 598 sequences # 1
consensus_11607#4 length = 240 sequences # 1

consensusID : consensus_11607#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1288
fasta sequence

                              [CCGCGTTACATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCTCGACGGCTCGAACCCGGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATCGTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCCGACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCACCGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGTAATTAATCGACGGTATCAACATGTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGATTTTCTAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGAGTAAGATCATGCATATTGATCTTTGTACAAATGAAAAATGAAAAAAAAAAAGATGTCACTTGATCATCAGAAAAATAAATCCGCTTTCCCATATAGTTATATGTTCCACAGACACGTAACTGTTCTCCAGTATATAGAAATCTGATCACAAGTCTGCTATACCATGCATCATGCAGTTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAACTCCTTGTTCGCAGCATAATATGTCTACGTCACCCGCACGTCTCTAATAAAAAGAAGGAAAGAAGGAAAAATGAATTTAATGGGCCTGATTCGAGCTTGTGCATCCGTGTAAATACATAATATAGTGTAATTATTCTATACATCTCTATGCAAAATGTATGGCGTGGCTTAGTTGTTACAGTAAATTAATTACTTTTGTCTTCAAAAAAAAGA]

[+] EMBL CB620345             [CCGCGTTACATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCTCGACGGCTCGAACCCGGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATCGTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCCGACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCACCGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGTAATTAATCGACGGTATCAACATGTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGATTTTCTAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGAGTAAGATCATGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB620346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CACCCTCATGTATTTGGTAATTAATCGACGGTATCAACATGTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGATTTTCTAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGAGTAAGATCATGCATATTGATCTTTGTACAAATGAAAAATGAAAAAAAAAAAGATGTCACTTGATCATCAGAAAAATAAATCCGCTTTCCCATATAGTTATATGTTCCACAGACACGTAACTGTTCTCCAGTATATAGAAATCTGATCACAAGTCTGCTATACCATGCATCATGCAGTTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAACTCCTTGTTCGCAGCATAATATGTCTACGTCACCCGCACGTCTCTAATAAAAAGAAGGAAAGAAGGAAAAATGAATTTAATGGGCCTGATTCGAGCTTGTGCATCCGTGTAAATACATAATATAGTGTAATTATTCTATACATCTCTATGCAAAATGTATGGCGTGGCTTAGTTGTTACAGTAAATTAATTACTTTTGTCTTCAAAAAAAAGA]




>consensus_11607#0
CCGCGTTACATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCTC
GACGGCTCGAACCCGGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATCG
TCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCCG
ACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCACC
GTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGC
TTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCG
GCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCC
GACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTC
TTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTA
CGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGTAATTAATCGACGGTATCAACAT
GTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGATTTTC
TAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAGGCCGG
GCCACCATTCAATACAACAGTGCTCGAGTAAGATCATGCATATTGATCTTTGTACAAATG
AAAAATGAAAAAAAAAAAGATGTCACTTGATCATCAGAAAAATAAATCCGCTTTCCCATA
TAGTTATATGTTCCACAGACACGTAACTGTTCTCCAGTATATAGAAATCTGATCACAAGT
CTGCTATACCATGCATCATGCAGTTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATT
ACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCA
AGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAACTCCT
TGTTCGCAGCATAATATGTCTACGTCACCCGCACGTCTCTAATAAAAAGAAGGAAAGAAG
GAAAAATGAATTTAATGGGCCTGATTCGAGCTTGTGCATCCGTGTAAATACATAATATAG
TGTAATTATTCTATACATCTCTATGCAAAATGTATGGCGTGGCTTAGTTGTTACAGTAAA
TTAATTACTTTTGTCTTCAAAAAAAAGA

consensusID : consensus_11607#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 944
fasta sequence

                              [GGCCCTGGCCATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCTCGACGGCTCGAACCCCGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATCGTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCGGACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCACCGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCACTCCTTGTTCGCAGCATAATATGTCTACGTCACCGGCACATGTCTCTAATAAAAAGAAGGAAAGAAGGAAAAATGAATTTAATGGCCCTGATTCGAGCTTGTTCAAAGGGGTAAATACATAATATAGTGTAATTATTCTATACATCTATAAGGAAAATCTATGGTGTGCC]

[+] EMBL CB685283             [GGCCCTGGCCATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCTCGACGGCTCGAACCCCGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATCGTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCGGACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCACCGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGATTACAAGGAGGCGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGA                                                                                                                                                                                                                                                                                ]
[+] EMBL CB683359             [                           CGACCTTGCCGGAGGCGGCCGGCAGCAAGCCCTCGACGGCTCGAACCCGGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATCGTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCGGACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCACCGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAAGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGC                                                                                                                                                                             ]
[-] EMBL CB680672             [                                                                                                                                                                                                                                                                                                           GCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCACTCCTTGTTCGCAGCATAATATGTCTACGTCACCGGCACATGTCTCTAATAAAAAGAAGGAAAGAAGGAAAAATGAATTTAATGGCCCTGATTCGAGCTTGTTCAAAGGGGTAAAT                                                      ]
[-] EMBL CB685284             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTTTACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGATTACACATTCTTGTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTTCGACCGGACGGAGAGATCATCACCCTCATGTATTTGGCTGAAGGACAAGAGGCTGGGCCACCATTCAATACAACAGTGCTGGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATGGAGGACAATGAAGTGGCAGTTGAACCACGAAAGGGGATGGAGAAAATGGCAAGGTGGAAGAGGATGTCAAAATCCGACTAATAAGATAGTGGAGGATGCGCGCACTCCTTGTTTGCAGCATAATATGTCTACGTCACCCGCACATGTCTTTAATAAAAAGAAGGAAAGAAGGAAAAATGAATTTAATGGGCTTGATTCGAGCTTGTGCATCCGTGTAAATACATAATATAGTGTAATTATTCTATACATCTATAAGGAAAATCTATGGTGTGCC]




>consensus_11607#1
GGCCCTGGCCATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCT
CGACGGCTCGAACCCCGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATC
GTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCG
GACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCAC
CGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCG
CTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGC
GGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGC
CGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATT
CTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCT
ACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGCTGAAGGACAAGAGGCCGGGCC
ACCATTCAATACAACAGTGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCAT
TACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGC
AAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCACTCCTT
GTTCGCAGCATAATATGTCTACGTCACCGGCACATGTCTCTAATAAAAAGAAGGAAAGAA
GGAAAAATGAATTTAATGGCCCTGATTCGAGCTTGTTCAAAGGGGTAAATACATAATATA
GTGTAATTATTCTATACATCTATAAGGAAAATCTATGGTGTGCC

consensusID : consensus_11607#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence

                              [GCAGGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGTAATTAATCGACGGTATCAACATGTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGATTTTCTAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAACTCCTTGTTCGCAGCATAATATGTCTACGTCACCCGCA]

[+] EMBL BF430761             [GCAGGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGTAATTAATCGACGGTATCAACATGTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGATTTTCTAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAACTCCTTGTTCGCAGCATAATATGTCTACGTCACCCGCA]




>consensus_11607#2
GCAGGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATAT
CTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGA
CGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGA
GCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTC
GATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCAT
CACCCTCATGTATTTGGTAATTAATCGACGGTATCAACATGTCTAAAAATAATAATAATA
TCAGCCCCGATAAGAACTAACCAAAATTAACCTGATTTTCTAAATTTGTTCCTTCATTAC
ATATTTACATATGCATGCAGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAG
TGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACA
ATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGA
CAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAACTCCTTGTTCGCAGCATAATA
TGTCTACGTCACCCGCA

consensusID : consensus_11607#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence

                              [ACGACCGGNCCGGAGAGCTCATCACCCTCATGTATTTGTTGAAGGACAAGAGGCCGGCCCACCATTCAATACATACAATTCTCGATTACGAGGAGGTGCTGAACCCATTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATGGCAAGGTGGAAGAGGATGGCAATATCGGACCAATAAGATTGTGAAGGATGCGTGCACTCCTGTTCGCAGCATAATATATTTGGCGTCATCCGCATATGAGAGAATAAAATGTCTGTAATAAAAAGGGAGAAGGAAACAAAGAAATTTAAATAAATTTAATGTAAGTTGAGTTTGTGCACCAGTGTAATATATATAATAATATAGGGTAATTATTCTATGCATCTCAATGTAAAATGTATGGTGTGGCTTAATTATTACAGTAAATTAATTACTTCCTCTTGTCTTCTACTGTAAATCCATTCAATTGTGGGCCGTGTATTGAATCACATGAGAGATTCTCACGTGTTCATACCACCACTCTACAACTTTTTGCCCCCTTCAATTGGTATTTCATACAGCATGTGGCTCTCTCAAAAAAA]

[+] EMBL BQ909017             [ACGACCGGNCCGGAGAGCTCATCACCCTCATGTATTTGTTGAAGGACAAGAGGCCGGCCCACCATTCAATACATACAATTCTCGATTACGAGGAGGTGCTGAACCCATTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATGGCAAGGTGGAAGAGGATGGCAATATCGGACCAATAAGATTGTGAAGGATGCGTGCACTCCTGTTCGCAGCATAATATATTTGGCGTCATCCGCATATGAGAGAATAAAATGTCTGTAATAAAAAGGGAGAAGGAAACAAAGAAATTTAAATAAATTTAATGTAAGTTGAGTTTGTGCACCAGTGTAATATATATAATAATATAGGGTAATTATTCTATGCATCTCAATGTAAAATGTATGGTGTGGCTTAATTATTACAGTAAATTAATTACTTCCTCTTGTCTTCTACTGTAAATCCATTCAATTGTGGGCCGTGTATTGAATCACATGAGAGATTCTCACGTGTTCATACCACCACTCTACAACTTTTTGCCCCCTTCAATTGGTATTTCATACAGCATGTGGCTCTCTCAAAAAAA]




>consensus_11607#3
ACGACCGGNCCGGAGAGCTCATCACCCTCATGTATTTGTTGAAGGACAAGAGGCCGGCCC
ACCATTCAATACATACAATTCTCGATTACGAGGAGGTGCTGAACCCATTGGGTTTAGTCA
TTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATGG
CAAGGTGGAAGAGGATGGCAATATCGGACCAATAAGATTGTGAAGGATGCGTGCACTCCT
GTTCGCAGCATAATATATTTGGCGTCATCCGCATATGAGAGAATAAAATGTCTGTAATAA
AAAGGGAGAAGGAAACAAAGAAATTTAAATAAATTTAATGTAAGTTGAGTTTGTGCACCA
GTGTAATATATATAATAATATAGGGTAATTATTCTATGCATCTCAATGTAAAATGTATGG
TGTGGCTTAATTATTACAGTAAATTAATTACTTCCTCTTGTCTTCTACTGTAAATCCATT
CAATTGTGGGCCGTGTATTGAATCACATGAGAGATTCTCACGTGTTCATACCACCACTCT
ACAACTTTTTGCCCCCTTCAATTGGTATTTCATACAGCATGTGGCTCTCTCAAAAAAA

consensusID : consensus_11607#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 240
fasta sequence

                              [GGTCGACCCACGCGTCCGTCCGCATATGAGAGAAACATNAATGTCTGTAATNAAAATGGGATGATAGGATACACATATGGTAGAATTTACAATAATTTAAATGTAAGTTGAGTTTGTGCACCNGTGTAATATACTATAATAATATAGGGTAATTATTCTATGCATNTCAATGTAAAATGTATGGTGTGGCTTATATTATTACAGTAATTAATTACTTCCTNTTGTTTTTTAAAAAAAAAA]

[+] EMBL BQ907533             [GGTCGACCCACGCGTCCGTCCGCATATGAGAGAAACATNAATGTCTGTAATNAAAATGGGATGATAGGATACACATATGGTAGAATTTACAATAATTTAAATGTAAGTTGAGTTTGTGCACCNGTGTAATATACTATAATAATATAGGGTAATTATTCTATGCATNTCAATGTAAAATGTATGGTGTGGCTTATATTATTACAGTAATTAATTACTTCCTNTTGTTTTTTAAAAAAAAAA]




>consensus_11607#4
GGTCGACCCACGCGTCCGTCCGCATATGAGAGAAACATNAATGTCTGTAATNAAAATGGG
ATGATAGGATACACATATGGTAGAATTTACAATAATTTAAATGTAAGTTGAGTTTGTGCA
CCNGTGTAATATACTATAATAATATAGGGTAATTATTCTATGCATNTCAATGTAAAATGT
ATGGTGTGGCTTATATTATTACAGTAATTAATTACTTCCTNTTGTTTTTTAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11607#0      -CCGCGTTACATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCT 59
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      GGCCCTGGCCATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCT 60
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      CGACGGCTCGAACCCGGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATC 119
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      CGACGGCTCGAACCCCGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATC 120
consensus_11607#3      -----ACGACCGGNCCGGAGAGCTCATCACCCTCATGTATTTGTTGAAGGACAAGAGGCC 55
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      GTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCC 179
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      GTCGGATGGGTGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCG 180
consensus_11607#3      GGCCCACCATTCAATACATACAATTCTCGATTACGAGGAGGTGCTGAACCCATTGGGTTT 115
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      GACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCAC 239
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      GACGCCGGCCGTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCAC 240
consensus_11607#3      AGTCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAA 175
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      CGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCG 299
consensus_11607#2      --------------------GCAG-GGATACGATGTGGTTGCACTGTCCGGCCCCGGCCG 39
consensus_11607#1      CGTCCTCGTCCCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCG 300
consensus_11607#3      AATGGCAAGGTGGAAGAGGATGGCAATATCGGACCAATAAGATTGTGAAGGATGCGTGCA 235
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      CTTCGTCGTCGGCCTCGATATCTGTGACA-CGGCCATCCA-GAAGGCGAAGCAGCTGTCG 357
consensus_11607#2      CTTCGTCGTCGGCCTCGATATCTGTGACA-CGGCCATCCA-GAAGGCGAAGCAGCTGTCG 97
consensus_11607#1      CTTCGTCGTCGGCCTCGATATCTGTGACA-CGGCCATCCA-GAAGGCGAAGCAGCTGTCG 358
consensus_11607#3      CTCCTGTTCGCAGCATAATATATTTGGCGTCATCCGCATATGAGAGAATAA--AATGTCT 293
consensus_11607#4      ------------GGTCGACCCACGCGTC--CGTCCGCATATGAGAGAAACATNAATGTCT 46
                                        *       * *  *  **    * **  *         **** 

consensus_11607#0      GCGGCGGCGGCGG--CGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCG 415
consensus_11607#2      GCGGCGGCGGCGG--CGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCG 155
consensus_11607#1      GCGGCGGCGGCGG--CGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCG 416
consensus_11607#3      GTAATAAAAAGGGAGA---AGGAAACAAAGA------AATTTA-AATAAATTTAATGTAA 343
consensus_11607#4      GTAATNAAAATGGGATGATAGGATACACATATGGTAGAATTTACAATAATTTAAATGTAA 106
                       *          **       *   **            *     *     **     *  

consensus_11607#0      TCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACA 475
consensus_11607#2      TCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACA 215
consensus_11607#1      TCGCCGACGATTTCTTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACA 476
consensus_11607#3      --GTTGAGTTTGTGCACCAGTGTAATATA-TATAATAATATAGGGTAATTATT--CTATG 398
consensus_11607#4      --GTTGAGTTTGTGCACCNGTGTAATATACTATAATAATATAGGGTAATTATT--CTATG 162
                         *  **   * *   *  ***  *        *    *      * **  *   ***  

consensus_11607#0      CATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACC 535
consensus_11607#2      CATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACC 275
consensus_11607#1      CATTCTTCTGTGCTCTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACC 536
consensus_11607#3      CATCTCAATGTAAAATGTAT-----GGTGTGGCTTA-ATTATTACAGTAAATTAATTACT 452
consensus_11607#4      CATNTCAATGTAAAATGTAT-----GGTGTGGCTTATATTATTACAGTAA-TTAATTACT 216
                       ***     ***    ** **     * ** ***    **      **  * *     ** 

consensus_11607#0      TGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGTAATTAATCGACGGTATC 595
consensus_11607#2      TGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGGTAATTAATCGACGGTATC 335
consensus_11607#1      TGCTACGACCGGACGGAGAGCTCATCACCCTCATGTATTTGG------------------ 578
consensus_11607#3      TCCTCTTGTCTTCTACTGTAAATCCATTCAATTGTGGGCCGTGTATTGAATCACATGAGA 512
consensus_11607#4      TCCTNTTGTTTTTTAAAAAAAAAA------------------------------------ 240
                       * **                                                        

consensus_11607#0      AACATGTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGA 655
consensus_11607#2      AACATGTCTAAAAATAATAATAATATCAGCCCCGATAAGAACTAACCAAAATTAACCTGA 395
consensus_11607#1      ------------------------------------------------------------
consensus_11607#3      GATTCTCACGTGTTCATACCACCACTCTACAACTTTTTGCCCCCTTCAATTGGTATTTCA 572
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      TTTTCTAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAG 715
consensus_11607#2      TTTTCTAAATTTGTTCCTTCATTACATATTTACATATGCATGCAGGCTGAAGGACAAGAG 455
consensus_11607#1      ----------------------------------------------CTGAAGGACAAGAG 592
consensus_11607#3      TACAGCATGTGGCTCTCTCAAAAAAA---------------------------------- 598
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      GCCGGGCCACCATTCAATACAACAGTGCTCGAGTAAGATCATGCATATTGATCTTTGTAC 775
consensus_11607#2      GCCGGGCCACCATTCAATACAACAGTGCTCGA---------------------------- 487
consensus_11607#1      GCCGGGCCACCATTCAATACAACAGTGCTCGA---------------------------- 624
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      AAATGAAAAATGAAAAAAAAAAAGATGTCACTTGATCATCAGAAAAATAAATCCGCTTTC 835
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      ------------------------------------------------------------
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      CCATATAGTTATATGTTCCACAGACACGTAACTGTTCTCCAGTATATAGAAATCTGATCA 895
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      ------------------------------------------------------------
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      CAAGTCTGCTATACCATGCATCATGCAGTTACAAGGAGGTGCTGAACCCGTTGGGTTTAG 955
consensus_11607#2      ----------------------------TTACAAGGAGGTGCTGAACCCGTTGGGTTTAG 519
consensus_11607#1      ----------------------------TTACAAGGAGGTGCTGAACCCGTTGGGTTTAG 656
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      TCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAA 1015
consensus_11607#2      TCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAA 579
consensus_11607#1      TCATTACTTCTATCGAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAA 716
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      TCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAA 1075
consensus_11607#2      TCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCAAA 639
consensus_11607#1      TCGCAAGGTGGAAGAGGATGACAAAATCCGACTAATAAGATAGTGGAGGACGCGCGCA-- 774
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      CTCCTTGTTCGCAGCATAATATGTCTACGTCACC--CGCACGTCTCTAATAAAAAGAAGG 1133
consensus_11607#2      CTCCTTGTTCGCAGCATAATATGTCTACGTCACC--CGCA-------------------- 677
consensus_11607#1      CTCCTTGTTCGCAGCATAATATGTCTACGTCACCGGCACATGTCTCTAATAAAAAGAAGG 834
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      AAAGAAGGAAAAATGAATTTAATGGGCCTGATTCGAGCTTGTGCATCCGTGTAAATACAT 1193
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      AAAGAAGGAAAAATGAATTTAATGGCCCTGATTCGAGCTTGTTCAAAGGGGTAAATACAT 894
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      AATATAGTGTAATTATTCTATACATCTCTATGCAAAATGTATGGCGTGGCTTAGTTGTTA 1253
consensus_11607#2      ------------------------------------------------------------
consensus_11607#1      AATATAGTGTAATTATTCTATACATCTATAAGGAAAATCTATGGTGTGCC---------- 944
consensus_11607#3      ------------------------------------------------------------
consensus_11607#4      ------------------------------------------------------------
                                                                                   

consensus_11607#0      CAGTAAATTAATTACTTTTGTCTTCAAAAAAAAGA 1288
consensus_11607#2      -----------------------------------
consensus_11607#1      -----------------------------------
consensus_11607#3      -----------------------------------
consensus_11607#4      -----------------------------------