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Oryza sativa
cluster # 11622 cluster # 11622       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11622#0 length = 1148 sequences # 7  
consensus_11622#1 length = 815 sequences # 1  
consensus_11622#2 length = 751 sequences # 1  

consensusID : consensus_11622#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1148
fasta sequence
                              [CTAGCCGCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGTTTTCTGGTTCTTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATGAGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCGTCTTCTACCGCTACGGCAGGATCGACCGCATCGACATGAAGTCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTGTCATTAACTTTGACCCCATCAACACCAGAGTCACTGATATCGAAAGGCATTTC-GAACCATTTGG-AAAGCTTTCGAATGTTCGGAT-CAGGAGGAACTTT--GCTT-TT-GTG-CAG-TTTGAAACACAGGAAGAGGCCACAAAAGCACTTG-AAGCTACTCA-TTCTACC-AAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGAT-GATACAGAACGAGGTGACAGGTATGATGGTGC-AAGA-GGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGTTTGCATCTGCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATATGGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTTTACCTTTTGTTGAC-CTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATCAAGGCAAAACTCTGTGCGATGTACCTGTGCCACAACGTTTTCTATGACTACCGCACTTTATATTTCTAAAAAAAAAAAAAAATAGAGA]

[+] EMBL AK102071             [CTAGCCGCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGTTTTCTGGTTCTTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATGAGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCGTCTTCTACCGCTACGGCAGGATCGACCGCATCGACATGAAGTCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTGTCATTAACTTTGACCCCATCAACACCAGAGTCACTGATATCGAAAGGCATTTC GAACCATTTGG AAAGCTTTCGAATGTTCGGAT CAGGAGGAACTTT  GCTT TT GTG CAG TTTGAAACACAGGAAGAGGCCACAAAAGCACTTG AAGCTACTCA TTCTACC AAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGAT GATACAGAACGAGGTGACAGGTATGATGGTGC AAGA GGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGTTTGCATCTGCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATATGGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTTTACCTTTTGTTGAC CTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTT                                                                                               ]
[+] EMBL C97878               [CTAGCCGCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGTTTTCTGGTTCTTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATGAGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCCTCTTCTACCGCTACGGCAGGATCGACCGCATCGACATGAAGTCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTGTCATTAACTTTGACCCCATCAACACCAGAGTCACTGATATCGAAAGGCATTTCGGAACCATTTGGNAAAGNTTTCGAATGTTCGGAT CAGGAGGAACTTT  GCTT TT GTG CAG TTTGAAACACAGGAAGAGGCCACAAAAGCACTTGAAAGCTACTCA TTCTACC AAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGAT GATACAGAACGAGGTGACAGGGATGATGGTGCAAAGAGGGTGGCTATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB635902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 C GAACCATTTGG AAAGCTTTCGAATGTTCGGAT CAGGAGGAACTTT  GCTT TT GTG CAG TTTGAAACACAGGAAGAGGCCACAAAAGCACTTG AAGCTACTCA TTCTACC AAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGAT GATACAGAACGAGGTGACAGGTATGATGGTGC AAGA GGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGCTTGCATCTGCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATATGGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTTTACCTTTTGTTGAC CTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATCAAGGCAAAACTCTGTGCGATGTACCTGTGCCACAACGTTTTTTAGGGCTACCGCACTTTATATTTCTAAAAAAAAAAAAAAATAGAGA]
[-] EMBL CB668806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 C GACCCATTTGG AAAGCTTTCGAATGTTCGGAT CAGGAGGAACTTT  GCTT TT GTG CAG TTTGAAACACAGGAAGAGGCCACAAAAGCACTTG AAGCTACTCA TTCTACC AAGTTGTTGGACAGGGTGATTTCTGTTGAGTATCCCTTCAGGGAT GATACAGAACGAGGTGCCAGGTATGATGGTGC AAGA GGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATGGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCCCTTGCCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGTTTGCATCTCCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATATGGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTTTCCCTTTTGTTGAC CTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATCAAGGCAAAAATGGGTGCGATGT                                                                  ]
[-] EMBL CB669403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATTTGG AAAGCTTTCGAATGTTCGGAT CAGGAGGAACTTT  TCTT TT GTG CAG TTTGAATCACAGGAAGAGGCCACAAAAGCACTTG AAGCTACTCA TTCTACC AAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGAT GATACAGAACGAGGTGACAGGTATGATGGTGC AGGA GGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGTTTGCATCTGCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATATGGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTTTACCTTTTGTTGACACTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATCAAGGCAAAACTCTGTGCGATGTACCTGTTCCAAAGGGTTTTCTATGACTCCCGCTCTTTAT TTTCTAAAAAAga             ]
[-] EMBL CA759642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCCTTGGAATGTT GGAT CAGGAGGAACTTG  GC T TT GTG CAG TTT AAACACAGGAAGAGGCCCCAAAAGCACTTG AAGCTACTCA TTCTACC AAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGAT GATACAGAACGAGGTGCCAGGTATGATGGTGC AAGA GGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGCTTGCATCTGCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATATGGGTACTCATGGGTGGTTTGTAGTCGAACTGAAAATCTTTTACCTTTTGTTGAC CTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATCAAGGCAAAACTCTGTGCGATGTACCTGTGCCACAACGTTTTCTATGACTACCGCCCTTTATATTTTTAAAAAAAAAAAAAAAaa    ]
[+] EMBL C97877               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gcGATCCAGGAGGAACTTTTGGCTTNTTGGTGCCAGTTTTGAAACNCAGGAAGAGCCCACAAAAGCACTTGAAAGCTACTCATTTCTNCCAAAGTTTTTGGACAGGGTGATTTCTGTTGAGTATNCCTTCAGGGATGGATACAGAACGAGGTGACAGGTATGATGGTGC AAGA GGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGTTTGCATCTGCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATATGGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTTTACCTTTTGTTGAC CTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATCAAGGCAAAACTCTGTGCGATGTACCTGTGCCACAACGTTTTCTATGACTACCGCACTTTATATTTCAAAAA                 ]


>consensus_11622#0 CTAGCCGCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGTTTTCTGGTTC TTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATGAGGCCCGTGTTC GTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCGTCTTCTACCGCTAC GGCAGGATCGACCGCATCGACATGAAGTCAGGATTTGCTTTTGTCTACTTTGAGGATGAG CGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGC AGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAA CCACCTGTGAATACTAAACCCACGAAGACACTATTTGTCATTAACTTTGACCCCATCAAC ACCAGAGTCACTGATATCGAAAGGCATTTCGAACCATTTGGAAAGCTTTCGAATGTTCGG ATCAGGAGGAACTTTGCTTTTGTGCAGTTTGAAACACAGGAAGAGGCCACAAAAGCACTT GAAGCTACTCATTCTACCAAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGG GATGATACAGAACGAGGTGACAGGTATGATGGTGCAAGAGGTGGCTATGGTAGGCGAGAT GATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTAC GGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTAT CGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGAT TGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAGGGTTTGCATCTGCCTCTCTA GATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTACTATATATATAATTTAGATAT GGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTTTACCTTTTGTTGACCTGGAA CTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATCAAGGCAAAACTCTGTGCGAT GTACCTGTGCCACAACGTTTTCTATGACTACCGCACTTTATATTTCTAAAAAAAAAAAAA AATAGAGA



consensusID : consensus_11622#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 815
fasta sequence
                              [GCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGTTTTCTGGTTCTTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATGAGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCCTCTTCTACCGCTACGGCAGGATCGACCGCATCGACATGAAGTCAGAGGCAAAACTCAACTCCTGAAACACCCTCCATGCACTCATCCGGCCATCCCCTTCACTTGACCATCCATTACATGACGCGCGCTGTTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCGGGGACTGGCACCATCATGTGATCCATGCCGTGCCGTCAGTTCCATCATTCCATACCATGCCATGACTAGCAGTATCACCATGCCATCCTCCCGGCATCAACATCACAATGTTCTGTGCGTGCTGTCTCAATAAGCAATGCCTGTGAGATTGTTCTGTTATTGGTGAAGCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACTTTGGATATAAGTTATTACAACATCATGCTTAGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAGTGCTCTTCATACCATCAGATATTTTGCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTG]

[+] EMBL CB668805             [GCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGTTTTCTGGTTCTTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATGAGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCCTCTTCTACCGCTACGGCAGGATCGACCGCATCGACATGAAGTCAGAGGCAAAACTCAACTCCTGAAACACCCTCCATGCACTCATCCGGCCATCCCCTTCACTTGACCATCCATTACATGACGCGCGCTGTTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCGGGGACTGGCACCATCATGTGATCCATGCCGTGCCGTCAGTTCCATCATTCCATACCATGCCATGACTAGCAGTATCACCATGCCATCCTCCCGGCATCAACATCACAATGTTCTGTGCGTGCTGTCTCAATAAGCAATGCCTGTGAGATTGTTCTGTTATTGGTGAAGCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACTTTGGATATAAGTTATTACAACATCATGCTTAGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAGTGCTCTTCATACCATCAGATATTTTGCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTG]


>consensus_11622#1 GCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGTTTTCTGGTTCTTGCTG TCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATGAGGCCCGTGTTCGTGGGG AACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCCTCTTCTACCGCTACGGCAGG ATCGACCGCATCGACATGAAGTCAGAGGCAAAACTCAACTCCTGAAACACCCTCCATGCA CTCATCCGGCCATCCCCTTCACTTGACCATCCATTACATGACGCGCGCTGTTTACTGTTG TTACCACTGCCCGAGCATGTTTAGCGGGGACTGGCACCATCATGTGATCCATGCCGTGCC GTCAGTTCCATCATTCCATACCATGCCATGACTAGCAGTATCACCATGCCATCCTCCCGG CATCAACATCACAATGTTCTGTGCGTGCTGTCTCAATAAGCAATGCCTGTGAGATTGTTC TGTTATTGGTGAAGCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACTTTGGATATAAG TTATTACAACATCATGCTTAGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAG TGCTCTTCATACCATCAGATATTTTGCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCG TGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAG GCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACC ACCTGTGAATACTAAACCCACGAAGACACTATTTG



consensusID : consensus_11622#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 751
fasta sequence
                              [ACCACCCAAGCATGTCGATGTGCTTTATGTTAAATATGTTTTGTGGAAGCAATTAGGATGTTTAAGATTAGCTTGTCGTCATTACATCTGTAACATCCAACGGCGTGGAACACATAAATTGTGCATATGTATGATGGTCCATGCCCATGTAGCCGCAGTTGCAATATATGTACAGCAGGAAGCAAGATGTTTTAAATGTTTACTCTGGCGCAGGAACTACAGAGGCAAAACTCAACTCCTGAAACACCCTCCATGCACTCATCCGGCCATCCCCTTCACTTGACCATCCATTACATGACGCGCGCTGTTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCAGGGACTGGCACCATCATGTGATCCATGCCGTGCCGTCAGTTCCATCATTCCATACCATGCCATGACTAGCAGTATCACCATGCCATCCTCCCGGCATCAACATCACAATGTTCTGTGCGTGCTGTCTCAATAAGCAATGCCTGTGAGATTGTTCTGTTATTGGTGAAGCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACTTTGGATATAAGTTATTACAACATCATGCTTAGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAGTGCTCTTCATACCATCAGATATTTTGCAGGTGCAGTACTCTTCTGTTCTTATTAGGTCTGATTGAACGGGGATTGTGTGTTGAGTTGTTTATCATAAAGGAAAACTGGAAATGCTTGCACCTATTGGCGCAAAG]

[+] EMBL CB635901             [ACCACCCAAGCATGTCGATGTGCTTTATGTTAAATATGTTTTGTGGAAGCAATTAGGATGTTTAAGATTAGCTTGTCGTCATTACATCTGTAACATCCAACGGCGTGGAACACATAAATTGTGCATATGTATGATGGTCCATGCCCATGTAGCCGCAGTTGCAATATATGTACAGCAGGAAGCAAGATGTTTTAAATGTTTACTCTGGCGCAGGAACTACAGAGGCAAAACTCAACTCCTGAAACACCCTCCATGCACTCATCCGGCCATCCCCTTCACTTGACCATCCATTACATGACGCGCGCTGTTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCAGGGACTGGCACCATCATGTGATCCATGCCGTGCCGTCAGTTCCATCATTCCATACCATGCCATGACTAGCAGTATCACCATGCCATCCTCCCGGCATCAACATCACAATGTTCTGTGCGTGCTGTCTCAATAAGCAATGCCTGTGAGATTGTTCTGTTATTGGTGAAGCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACTTTGGATATAAGTTATTACAACATCATGCTTAGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAGTGCTCTTCATACCATCAGATATTTTGCAGGTGCAGTACTCTTCTGTTCTTATTAGGTCTGATTGAACGGGGATTGTGTGTTGAGTTGTTTATCATAAAGGAAAACTGGAAATGCTTGCACCTATTGGCGCAAAG]


>consensus_11622#2 ACCACCCAAGCATGTCGATGTGCTTTATGTTAAATATGTTTTGTGGAAGCAATTAGGATG TTTAAGATTAGCTTGTCGTCATTACATCTGTAACATCCAACGGCGTGGAACACATAAATT GTGCATATGTATGATGGTCCATGCCCATGTAGCCGCAGTTGCAATATATGTACAGCAGGA AGCAAGATGTTTTAAATGTTTACTCTGGCGCAGGAACTACAGAGGCAAAACTCAACTCCT GAAACACCCTCCATGCACTCATCCGGCCATCCCCTTCACTTGACCATCCATTACATGACG CGCGCTGTTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCAGGGACTGGCACCATCAT GTGATCCATGCCGTGCCGTCAGTTCCATCATTCCATACCATGCCATGACTAGCAGTATCA CCATGCCATCCTCCCGGCATCAACATCACAATGTTCTGTGCGTGCTGTCTCAATAAGCAA TGCCTGTGAGATTGTTCTGTTATTGGTGAAGCACTCTCAGTATCTCCTGAGTCGTATCGT CTTACTTTGGATATAAGTTATTACAACATCATGCTTAGCTCTGATCCATCAATGGAATCT ACCAATAACCACACTAGTGCTCTTCATACCATCAGATATTTTGCAGGTGCAGTACTCTTC TGTTCTTATTAGGTCTGATTGAACGGGGATTGTGTGTTGAGTTGTTTATCATAAAGGAAA ACTGGAAATGCTTGCACCTATTGGCGCAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11622#1      ----------------GCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGT 44
consensus_11622#2      ACCACCCAAGCATGTCGATGTGCTTTATGTTAAATATGTTTTGTGGAAGCAATTAGGATG 60
consensus_11622#0      ----------CTAGCCGCCTCCCCCTTCGTCCTCCGCTCCACGAGACCACGACGCAGGGT 50
                                       *     *  *  **            * *    * *    *   

consensus_11622#1      TTTCTGGTT--CTTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATG 102
consensus_11622#2      TTTAAGATTAGCTTGTCGTCATTACATCTGTAACATCCAACGGCGTGGAACACATAAATT 120
consensus_11622#0      TTTCTGGTT--CTTGCTGTCTTGGGATCTTTGATTTGCTGCGAAGGCGAAGGCGAAGATG 108
                       ***  * **  ****  *** *   **** * *  * *  **  *  ***  *  * ** 

consensus_11622#1      AGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCCTC 162
consensus_11622#2      GTGCATATGT--ATGATGGTCCATGCCCATG-TAGCCGCAGTTGCAATATATGT-ACAGC 176
consensus_11622#0      AGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCGTC 168
                         **   ***   **  *  **  * * * *  * ****   * * *  *      *  *

consensus_11622#1      TTCTACCGCTACGGCAGGATCGACCGCATCGA--CATGAAGT-CAGAGGCAAAACTCAAC 219
consensus_11622#2      AGGAAGCAAGATGTTTTAAATGTTTACTCTGGCGCAGGAACTACAGAGGCAAAACTCAAC 236
consensus_11622#0      TTCTACCGCTACGGCAGGATCGACCGCATCGA--CATGAAGT-CAGGATTTGCTTTTGTC 225
                           * *   * *     *  *    *   *   ** *** * ***         *   *

consensus_11622#1      TCCTGAAACACCCTCCATG-CACTCATCCGGCCATCCCCTTCACT--TGACCATCCATTA 276
consensus_11622#2      TCCTGAAACACCCTCCATG-CACTCATCCGGCCATCCCCTTCACT--TGACCATCCATTA 293
consensus_11622#0      TACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTT 285
                       * **   *       * **    * **  ****** *    *  *  ** * **** ** 

consensus_11622#1      ---CATGACGCGCGCTG---TTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCGGGG- 329
consensus_11622#2      ---CATGACGCGCGCTG---TTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCAGGG- 346
consensus_11622#0      GGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGT 345
                          * **    **** *   **   **  **   *** *   ** * ** **    * * 

consensus_11622#1      ACTGGCACCATCATGTGATCCATG----------CCGTGCCGTCAGT-TCCATCATTCCA 378
consensus_11622#2      ACTGGCACCATCATGTGATCCATG----------CCGTGCCGTCAGT-TCCATCATTCCA 395
consensus_11622#0      GATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTGTCATTAAC 405
                         ****   * **    * *  **          **  *  * ** * *   *****   

consensus_11622#1      TACCATGCCATGACTAGCAGTATCACC-ATGCC---ATCCTCCCGGCATCAACATCACAA 434
consensus_11622#2      TACCATGCCATGACTAGCAGTATCACC-ATGCC---ATCCTCCCGGCATCAACATCACAA 451
consensus_11622#0      TTTGACCCCATCAACACCAGAGTCACTGATATCGAAAGGCATTTCGAACCA-TTTGGAAA 464
                       *   *  **** *  * ***  ****  **  *   *  *     * * **   *   **

consensus_11622#1      TGTTCTGTGCGTGCTG-TCTCAATAAGCAATGCCTGTGAGATTGTTCTGTTATTGGTGAA 493
consensus_11622#2      TGTTCTGTGCGTGCTG-TCTCAATAAGCAATGCCTGTGAGATTGTTCTGTTATTGGTGAA 510
consensus_11622#0      GCTTTCGAATGTTCGGATCAGGAGGAACTTTGCTTTTGTG--CAGTTTGAAACACAGGAA 522
                         **  *   ** * * **   *  * *  *** * ** *     * **  *     ***

consensus_11622#1      GCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACT------TTGGATATAAGTTATTAC 547
consensus_11622#2      GCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACT------TTGGATATAAGTTATTAC 564
consensus_11622#0      GAGGCCACAAAAGCACTTGAAGCTACTCATTCTACCAAGTTGTTGGACA-GGGTGATTTC 581
                       *    * **  * * * ***  *   ** *  ***       ***** *   ** *** *

consensus_11622#1      AAC--ATCATGCTT--AGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAGTGC 603
consensus_11622#2      AAC--ATCATGCTT--AGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAGTGC 620
consensus_11622#0      TGTTGAGTATGCCTTCAGGGATGATACAGAACGAGGTGACAGGTATGATGGTGCAAGAGG 641
                            *  **** *  **   **** **  *   *     *   ** *     * ** * 

consensus_11622#1      TCTTCATACCA--TCAGATATTTTGCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGT 661
consensus_11622#2      TCTTCATACCA--TCAGATATTTTGCAGGTGCAGTACTCTTCTGTTCTTAT--TAGGTCT 676
consensus_11622#0      TGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTG-TACAGGT 700
                       *    **   *    ****  *   *           *    *  *       *     *

consensus_11622#1      GATGGTGATGAGGCCA-TACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGC-GCA 719
consensus_11622#2      GATTGAACGGGGATTG-TGTGTTGAGTTGTTTATCATAAAGGAAAACTGGAAATGC-TTG 734
consensus_11622#0      CACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGA 760
                        *       *       *  *                            *     *    

consensus_11622#1      GGCTT-TCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAA 778
consensus_11622#2      CACCTATTGGCGCAAAG------------------------------------------- 751
consensus_11622#0      GTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTG 820
                         * * *    *                                                

consensus_11622#1      CCACCTGTGAATACTAAACCCACGAAGACACTATTTG----------------------- 815
consensus_11622#2      ------------------------------------------------------------
consensus_11622#0      CCAACAGAAGAGCTTATGATTGACAGAGTTTTCTCAAGGGTGGTTGGCTGGTTGCTGAAG 880
                                                                                   

consensus_11622#1      ------------------------------------------------------------
consensus_11622#2      ------------------------------------------------------------
consensus_11622#0      GGTTTGCATCTGCCTCTCTAGATCTTTAGCAGTGATAGCAAGAACTTGTCTTCTCCGTAC 940
                                                                                   

consensus_11622#1      ------------------------------------------------------------
consensus_11622#2      ------------------------------------------------------------
consensus_11622#0      TATATATATAATTTAGATATGGGTACTCATGGGTGGTTCGTAGTCGAACTGAAAATCTTT 1000
                                                                                   

consensus_11622#1      ------------------------------------------------------------
consensus_11622#2      ------------------------------------------------------------
consensus_11622#0      TACCTTTTGTTGACCTGGAACTCCGTACTAGTATAATTTAGATATGATGTGTTGTGCATC 1060
                                                                                   

consensus_11622#1      ------------------------------------------------------------
consensus_11622#2      ------------------------------------------------------------
consensus_11622#0      AAGGCAAAACTCTGTGCGATGTACCTGTGCCACAACGTTTTCTATGACTACCGCACTTTA 1120
                                                                                   

consensus_11622#1      ----------------------------
consensus_11622#2      ----------------------------
consensus_11622#0      TATTTCTAAAAAAAAAAAAAAATAGAGA 1148
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)