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Oryza sativa
cluster # 11627 cluster # 11627       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11627#0 length = 927 sequences # 7  
consensus_11627#1 length = 756 sequences # 1  
consensus_11627#2 length = 592 sequences # 1  

consensusID : consensus_11627#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 927
fasta sequence
                              [TAAAAAAAGGGCACTTCCCAGAACTTATTGACCTATGCCTTGTAGTGGGAAACCCAAATCTGCCTACAATCGAAGAAGGAGCTTCGCCGAAACTTGTTTCACTTCAGCTGCTCTGTCAAGCTCTAGATGGTCTCTCTGGCATCAACATCGGATGGCTCAAACGACTTGAGGAAGTTGCCCTTGATTGCAAGGTCAATCCAGACACAATAGAGACTTGGGAAAATGAAGCCAAGAAGCATCCAAAGAGGCCAAAGGTTTTGTTCCTAGAAAGGATCGATCCAAATGACGAGGATTCCATGGTGAAATACGTCGCGTCCGAAAGACCAGCAGCTAGGACGGGATCCTCGGCCTCGCAGCAGCAAACTCATGCTGCTGCTCCGACCCCGACAAGTTCTACTGGCGAGACCACCACCGGTCTGAATC-GTTCACTTCCAGGTCCTTCTACGGCT-TCAATTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAAC-TGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGT-AATTATAAAGGTAATC-ACTACTATATCAGTACAAATCATGATCTTCACCAA-CACA-AGATACTACC-ACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTG-AAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGT-CTTGT-GCA--CT-GC-CTTC-AAAATAAGTCCTGCA--GCC-AAACACGTGCTATAGACT-GAGTTAAATTT-CT-CTTCGTGTC-ATCATCTTCC-GTCA-AAGTTG-TTTC-AGATTGC-TT-TTT-CCCTGTAC-GTATAAGAGAAAAGTTGTGTGTTCACATTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTAAAAAAAAAA]

[+] EMBL CA766390             [TAAAAAAAGGGCACTTCCCAGAACTTATTGACCTATGCCTTGTAGTGGGAAACCCAAATCTGCCTACAATCGAAGAAGGAGCTTCGCCGAAACTTGTTTCACTTCAGCTGCTCTGTCAAGCTCTAGATGGTCTCTCTGGCATCAACATCGGATGGCTCAAACGACTTGAGGAAGTTGCCCTTGATTGCAAGGTCAATCCAGACACAATAGAGACTTGGGAAAATGAAGCCAAGAAGCATCCAAAGAGGCCAAAGGTTTTGTTCCTAGAAAGGATCGATCCAAATGACGAGGATTCCATGGTGAAATACGTCGCGTCCGAAAGACCAGCAGCTAGGACGGGATCCTCGGCCTCGCAGCAGCAAACTCATGCTGCTGCTCCGACCCCGACAAGTTCTACTGGCGAGACCACCACCGGTCTGAATC GTTCACTTCCAGGTCCTTCTACGGCT TCAATTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAAC TGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGT AATTATAAAGGTAATC ACTACTTTATCTGTACAAATCATGATCTTCACTAA CACA AGATGCTACC ACCGAAGCTTCAAGGATCACGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTG AAGACGAGCGAGTCCGCCTTTTACCGGGNTGGCTGT CTTGN GCA  CT GG CTTC AAAATAAGTCCTGCA  GCC AAACACGTGCTATAGACT GAGGTNAAATT CT TTTTGGGNC ATCATCTTCC GNCA AAGGTGNTTTN ANATTGC TT TTT NCCTGNAC GTATAAna                                                                                                  ]
[+] EMBL CB096690             [                                                                                                        caaggggTCTGTCAAGCTCTAGATGGTCTCTCTGGCATCAACATCGGATGGCTCAAACGACTTGAGGAAGTTGCCCTTGATTGCAAGGTCAATCCAGACACAATAGAGACTTGGGAAAATGAAGCCAAGAAGCATCCAAAGAGGCCAAAGGTTTTGTTCCTAGAAAGGATCGATCCAAATGACGAGGATTCCATGGTGAAATACGTCGCGTCCGAAAGACCAGCAGCTAGGACGGGATCCTCGGCCTCGCAGCANCAAGCTCATGCTGCTGCTCCGACCCCGACAAGTTCTACTGGCGAGACCACCACCGGTCTGAATC GTTCACTTCCAGGTCCTTCTACGGCT TCAATTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAAC TGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGT AATTATAAAGGTNATC ACTACTATATCAGTACAAATCATGATCTTCACCAA CACA AGATACTACC ACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTG AAGACGAGCGAGTCCGNCTTTTACCGNGTTGTCTGT CTTGN GCA  CT GN CTTC AAAATAAGTCCTGCA  GCC AAACACGTGCTATAGACT GAGTTAAATTT CT CTTCGNGTC ATCATCTNCC GTCA AAGNTG NTTC ANATTGC TT TTT CCCTGTAC GTATAAGAGAAAAGTTGGGNGGTCACATTTTTCTCGNNCCGNGNTCTGCTNTACGTTGGNGAACTAGTTACGATATTCTATGATNCT                   ]
[-] EMBL CB620847             [                                                                                                                                                            TCAAACGACTTGAGGAAGTTGCCCTTGATTGCAAGGTCAATCCAGACACAATAGAGACTTGGGAAAATGAAGCCAAGAAGCATCCAAAGAGGCCAAAGGTTTTGTTCCTAGAAAGGATCGATCCAAATGACGAGGATTCCATGGTGAAATACGTCGCGTCCGAAAGACCAGCAGCTAGGACGGGATCCTCGGCCTCGCAGCAGCAAACTCATGCTGCTGCTCCGACCCCGACAAGTTCTACTGGCGAGACCACCACCGGTCTGAATC GTTCACTTCCAGGTCCTTCTACGGCT TCAATTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAAC TGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGT AATTATAAAGGTAATC ACTACTATATCAGTACAAATCATGATCTTCACCAA CACA AGATACTACC ACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTG AAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGT CTTGT GCA  CT GC CTTC AAAATAAGTCCTGCA  GCC AAACACGTGCTATAGACT GAGTTAAATTT CT CTTCGTGTC ATCATCTTCC GTCA AAGTTG TTTC AGATTGC TT TTT CCCTGTAC GTATAAGAGAAAAGTTGTGTGTTCACATTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTGGTTACGATAATCTATGATACTGCTTGGACTA         ]
[+] EMBL CA764420             [                                                                                                                                                                                                                                                                                                       CATGGTGAAATACGTCGCGTCCGAAAGACCAGCAGCTAGGACGGGATCCTCGGCCTCGCAGCAGCAAACTCATGCTGCTGCTCCGACCCCGACAAGTTCTACTGGCGAGACCACCACCGGTCTGAATC GTTCACTTCCAGGTCCTTCTACGGCT TCAATTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAAC TGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGT AATTATAAAGGTAATC ACTACTATATCAGTACAAATCATGATCTTCACCAA CACA AGATACTACC ACCGAAGCTTCAAGGATCATGGGTGTACAGTGGAGCGCTGCTACGTACTACGACGATCTG AAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGT CTTGT GCA  CT GC CTTC AAAATAAGTCCTGCA  GCC AAACACGTGCTATAGACT GAGTTAAATTT CT CTTCGTGTC ATCATCTTCC GTCA AAGTTG TTTC AGATTGC TT TTT CCCTGTAC GTATAAGAGAAAAGTTGTGTGTTCACATTTTTCTCGTACCGCGTTCTGCTATACGTTAGTGAACTAGTTACG                                  ]
[+] EMBL BM421119             [                                                                                                                                                                                                                                                                                                                                                                                                                                   AATCGGTTCACTTCCAGGTCCTTCTACGGCTGTCAATTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAAC TGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGT AATTATAAAGGTAATC ACTACTATATCAGTACAAATCATGATCTTCACCAA CACATAGATACTACC ACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTG AAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGT CTTGT GCA  CT GC CTTC AAAATAAGTCCNGCA  GCC AGACACGTGCTATAGACT GAGTTAAATTT CT CTTCGTGTC ATCATCTTCC GTCA AAGTTG TTTC AGATTGC TT TTT CCCTGTAC GTATAAGAGAAAAGTTGTGTGTTCACATTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTAt        ]
[+] EMBL BI813559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCCCTGCTCTGCAACTTGCAAGGACGAT GTC GATAGATTAATTCGAAGCGTAAATTATAAAGGTAATCAACTACTATATCAGTACAAATCATGATCTTCACCAACCACA AGATACTACCAACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTGCAAGACTAGCGAGTCCGCCTTTTACCGTGTTGTCTGTCCTTGTGGCAACCTGGCACTTCAAAAATAAGTCCTGCAACGCCAAAACACGTGCTATAGACTCGAGTTAAATTTGCTCCTTCGTGTCAATCATCTTCCAGTCACAAGTTG TTTCAAGATTGCATTGTTTGCCCTGTACAGTATAAGAGAAAAGTTGTGTGTTCACATTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTAAAAA     ]
[+] EMBL BI804778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TACTATATCAGTACAAATCATGATCTTCACC A CACA AGATACTACC ACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTG AAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGT CTTGT GCA  CT GC CTTC AAAATAAGTCCTGCA  GCC CAACACGTGCTATAGACT GAGTTAAATTT CT CTTCGTGTC ATCATCTTCC GTCA AAGTTG TTTC AGATTTC TT TTTCCCCTGTAC GTATAAGAGAAAAGTTGTGTGTTCACATTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTAAAAAAAAAA]


>consensus_11627#0 TAAAAAAAGGGCACTTCCCAGAACTTATTGACCTATGCCTTGTAGTGGGAAACCCAAATC TGCCTACAATCGAAGAAGGAGCTTCGCCGAAACTTGTTTCACTTCAGCTGCTCTGTCAAG CTCTAGATGGTCTCTCTGGCATCAACATCGGATGGCTCAAACGACTTGAGGAAGTTGCCC TTGATTGCAAGGTCAATCCAGACACAATAGAGACTTGGGAAAATGAAGCCAAGAAGCATC CAAAGAGGCCAAAGGTTTTGTTCCTAGAAAGGATCGATCCAAATGACGAGGATTCCATGG TGAAATACGTCGCGTCCGAAAGACCAGCAGCTAGGACGGGATCCTCGGCCTCGCAGCAGC AAACTCATGCTGCTGCTCCGACCCCGACAAGTTCTACTGGCGAGACCACCACCGGTCTGA ATCGTTCACTTCCAGGTCCTTCTACGGCTTCAATTGAGATATCCAGCGTGGCTTGACGGG AACGGCGTGATGCCTGCTCTGCAACTGCAAGGACGATGGTCGGATAGATTAATTCGAAGC GTAATTATAAAGGTAATCACTACTATATCAGTACAAATCATGATCTTCACCAACACAAGA TACTACCACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGA CGATCTGAAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGTCTTGTGCACTGCCTTCA AAATAAGTCCTGCAGCCAAACACGTGCTATAGACTGAGTTAAATTTCTCTTCGTGTCATC ATCTTCCGTCAAAGTTGTTTCAGATTGCTTTTTCCCTGTACGTATAAGAGAAAAGTTGTG TGTTCACATTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCT ATGATACTGCTTGGACTAAAAAAAAAA



consensusID : consensus_11627#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 756
fasta sequence
                              [CTAGAAGATNAACCATATGGACGAGATTCCATTGGNAAATTCGCGTCCGAAGACCAGCACTTTAGGACCGGGATCTCGCCCTNNAACACCAACTCATGCTTGCTGNTCCGACCCCCGACCAAGGTTTTACGTGGCCGAGACCACCCACCGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAAGTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATCGCCTGCTCTGCAAACTGCAAGGACAGATGGTCGGATAGATTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACAAAATCATGATCTTCACCAACACAAGATACTACCACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGGCTACGTACTACGACAGATCTGAAGACGAGCGAGTCCGCCTTTTGACCGTGGTGTGGTGCTGGTGCTGTGGTGGCACTGCCTTGCAAAATGAAGTGCCTGGCAGCCAACACCGTGGCTATGAGACTGGAGTTGAAATGTTGCTGCTTGCGTGGTGCATGCATGCTGTGCCGTGCAAAGTTGGTGTTGCAGATTGCTTTTGTGCCCCTGTACGTATAAGAGAAAAGTTGGTGGTGGTTGCACATTGTGTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTATATTTTTTTCTCCCCAGATGAGATATAAACTACTCACCCTGTGTGNTCATAAAAA]

[+] EMBL BM038659             [CTAGAAGATNAACCATATGGACGAGATTCCATTGGNAAATTCGCGTCCGAAGACCAGCACTTTAGGACCGGGATCTCGCCCTNNAACACCAACTCATGCTTGCTGNTCCGACCCCCGACCAAGGTTTTACGTGGCCGAGACCACCCACCGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAAGTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATCGCCTGCTCTGCAAACTGCAAGGACAGATGGTCGGATAGATTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACAAAATCATGATCTTCACCAACACAAGATACTACCACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGGCTACGTACTACGACAGATCTGAAGACGAGCGAGTCCGCCTTTTGACCGTGGTGTGGTGCTGGTGCTGTGGTGGCACTGCCTTGCAAAATGAAGTGCCTGGCAGCCAACACCGTGGCTATGAGACTGGAGTTGAAATGTTGCTGCTTGCGTGGTGCATGCATGCTGTGCCGTGCAAAGTTGGTGTTGCAGATTGCTTTTGTGCCCCTGTACGTATAAGAGAAAAGTTGGTGGTGGTTGCACATTGTGTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTATATTTTTTTCTCCCCAGATGAGATATAAACTACTCACCCTGTGTGNTCATAAAAA]


>consensus_11627#1 CTAGAAGATNAACCATATGGACGAGATTCCATTGGNAAATTCGCGTCCGAAGACCAGCAC TTTAGGACCGGGATCTCGCCCTNNAACACCAACTCATGCTTGCTGNTCCGACCCCCGACC AAGGTTTTACGTGGCCGAGACCACCCACCGGTCTGAATCGTTCACTTCCAGGTCCTTCTA CGGCTTCAAGTGAGATATCCAGCGTGGCTTGACGGGAACGGCGTGATCGCCTGCTCTGCA AACTGCAAGGACAGATGGTCGGATAGATTAATTCGAAGCGTAATTATAAAGGTAATCACT ACTATATCAGTACAAAATCATGATCTTCACCAACACAAGATACTACCACCGAAGCTTCAA GGATCATGGGTGTACAGCGGAGCGCTGGCTACGTACTACGACAGATCTGAAGACGAGCGA GTCCGCCTTTTGACCGTGGTGTGGTGCTGGTGCTGTGGTGGCACTGCCTTGCAAAATGAA GTGCCTGGCAGCCAACACCGTGGCTATGAGACTGGAGTTGAAATGTTGCTGCTTGCGTGG TGCATGCATGCTGTGCCGTGCAAAGTTGGTGTTGCAGATTGCTTTTGTGCCCCTGTACGT ATAAGAGAAAAGTTGGTGGTGGTTGCACATTGTGTTCTCGTACCGCGTTCTGCTATACGT TGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTATATTTTTTTCTCCCCAGAT GAGATATAAACTACTCACCCTGTGTGNTCATAAAAA



consensusID : consensus_11627#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 592
fasta sequence
                              [AAGGAGCTTCGCCGAACTGGTTTCACCTTCAGCTGGCTCCGACCCCCGACACAGTTCTACTGGCGAGACCACCACCGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAATTGAGATATCCACGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAACTGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACCAATCATGATCTTCACCCAACACCAGATACTACCCCCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTGAAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGTCTTGTGCACTGCCTTCAAAATAAGTCCTGCAGCCCAACACGTGCTATAGACTGAGTTAAATTTCTCTTCGTGTCATCATCTTCCGTCAAAGTTGTTTCAGATTGCTTTTTCCCTGTACGTATAAGAGAAAAGTTGTGTGTTCACCTTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTAAAAAAAAAA]

[+] EMBL BI811757             [AAGGAGCTTCGCCGAACTGGTTTCACCTTCAGCTGGCTCCGACCCCCGACACAGTTCTACTGGCGAGACCACCACCGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAATTGAGATATCCACGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAACTGCAAGGACGATGGTCGGATAGATTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACCAATCATGATCTTCACCCAACACCAGATACTACCCCCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCTGCTACGTACTACGACGATCTGAAGACGAGCGAGTCCGCCTTTTACCGTGTTGTCTGTCTTGTGCACTGCCTTCAAAATAAGTCCTGCAGCCCAACACGTGCTATAGACTGAGTTAAATTTCTCTTCGTGTCATCATCTTCCGTCAAAGTTGTTTCAGATTGCTTTTTCCCTGTACGTATAAGAGAAAAGTTGTGTGTTCACCTTTTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTAAAAAAAAAA]


>consensus_11627#2 AAGGAGCTTCGCCGAACTGGTTTCACCTTCAGCTGGCTCCGACCCCCGACACAGTTCTAC TGGCGAGACCACCACCGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAATTGA GATATCCACGCGTGGCTTGACGGGAACGGCGTGATGCCTGCTCTGCAACTGCAAGGACGA TGGTCGGATAGATTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACCA ATCATGATCTTCACCCAACACCAGATACTACCCCCGAAGCTTCAAGGATCATGGGTGTAC AGCGGAGCGCTGCTACGTACTACGACGATCTGAAGACGAGCGAGTCCGCCTTTTACCGTG TTGTCTGTCTTGTGCACTGCCTTCAAAATAAGTCCTGCAGCCCAACACGTGCTATAGACT GAGTTAAATTTCTCTTCGTGTCATCATCTTCCGTCAAAGTTGTTTCAGATTGCTTTTTCC CTGTACGTATAAGAGAAAAGTTGTGTGTTCACCTTTTTCTCGTACCGCGTTCTGCTATAC GTTGGTGAACTAGTTACGATAATCTATGATACTGCTTGGACTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11627#0      TAAAAAAAGGGCACTTCCCAGAACTTATTGACCTATGCCTTGTAGTGGGAAACCCAAATC 60
consensus_11627#2      ------------------------------------------------------------
consensus_11627#1      ------------------------------------------------------------
                                                                                   

consensus_11627#0      TGCCTACAATCGAAGAAGGAGCTTCGCCGAAACTTGTTTCACTTCAGCTGCTCTGTCAAG 120
consensus_11627#2      ------------------------------------------------------------
consensus_11627#1      ------------------------------------------------------------
                                                                                   

consensus_11627#0      CTCTAGATGGTCTCTCTGGCATCAACATCGGATGGCTCAAACGACTTGAGGAAGTTGCCC 180
consensus_11627#2      ------------------------------------------------------------
consensus_11627#1      ------------------------------------------------------------
                                                                                   

consensus_11627#0      TTGATTGCAAGGTCAATCCAGACACAATAGAGACTTGGGAAAATGAAGCCAAGAAGCATC 240
consensus_11627#2      ------------------------------------------------------------
consensus_11627#1      ------------------------------------------------------------
                                                                                   

consensus_11627#0      CAAAGAGGCCAAAGGTTTTGTTCCTAGAAAGGATCGATCCAAATGACGAGGATTCCATGG 300
consensus_11627#2      ------------------------------------------------------------
consensus_11627#1      -----------------------CTAGAA--GATNAACCATATGGACGAG-ATTCCATTG 34
                                                                                   

consensus_11627#0      TGAAATACGTCGCGTCCGAAAGACCAGCAGCT-AGGACGGGATCCTCGGCCTCGCAGCAG 359
consensus_11627#2      -------------------------------------AAGGAGCTTCGCCGAACTGGTTT 23
consensus_11627#1      GNAAAT---TCGCGTCCGAA-GACCAGCACTTTAGGACCGGGATCTCGCCCTNN-AACAC 89
                                                              **    *** *          

consensus_11627#0      CAAACTCATGCT-GCTGCTCCGACCCC-GAC-A-AGTTCTAC-TGGC-GAGACCACC-AC 412
consensus_11627#2      CACCTTCA-GCT-G--GCTCCGACCCCCGAC-ACAGTTCTAC-TGGC-GAGACCACC-AC 75
consensus_11627#1      CAA-CTCATGCTTGCTGNTCCGACCCCCGACCAAGGTTTTACGTGGCCGAGACCACCCAC 148
                       **   *** *** *  * ********* *** *  *** *** **** ********* **

consensus_11627#0      CGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAATTGAGATATCCA-GCGTGG 471
consensus_11627#2      CGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAATTGAGATATCCACGCGTGG 135
consensus_11627#1      CGGTCTGAATCGTTCACTTCCAGGTCCTTCTACGGCTTCAAGTGAGATATCCA-GCGTGG 207
                       ***************************************** *********** ******

consensus_11627#0      CTTGACGGGAACGGCGTGAT-GCCTGCTCTGCAA-CTGCAAGGAC-GATGGTCGGATAGA 528
consensus_11627#2      CTTGACGGGAACGGCGTGAT-GCCTGCTCTGCAA-CTGCAAGGAC-GATGGTCGGATAGA 192
consensus_11627#1      CTTGACGGGAACGGCGTGATCGCCTGCTCTGCAAACTGCAAGGACAGATGGTCGGATAGA 267
                       ******************** ************* ********** **************

consensus_11627#0      TTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACAAA-TCATGATCTT 587
consensus_11627#2      TTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACCAA-TCATGATCTT 251
consensus_11627#1      TTAATTCGAAGCGTAATTATAAAGGTAATCACTACTATATCAGTACAAAATCATGATCTT 327
                       ********************************************** ** **********

consensus_11627#0      CACC-AACACAAGATACTACCACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCT 646
consensus_11627#2      CACCCAACACCAGATACTACCCCCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCT 311
consensus_11627#1      CACC-AACACAAGATACTACCACCGAAGCTTCAAGGATCATGGGTGTACAGCGGAGCGCT 386
                       **** ***** ********** **************************************

consensus_11627#0      G-CTACGTACTACGAC-GATCTGAAGACGAGCGAGTCCGCCTTTT-ACCGTGTTGT---- 699
consensus_11627#2      G-CTACGTACTACGAC-GATCTGAAGACGAGCGAGTCCGCCTTTT-ACCGTGTTGT---- 364
consensus_11627#1      GGCTACGTACTACGACAGATCTGAAGACGAGCGAGTCCGCCTTTTGACCGTGGTGTGGTG 446
                       * ************** **************************** ****** ***    

consensus_11627#0      -CTGTCTTGTG----CACTGCCTT-CAAAATAA---GTCCTGCAGCCAAACACGTG-CTA 749
consensus_11627#2      -CTGTCTTGTG----CACTGCCTT-CAAAATAA---GTCCTGCAGCCCAACACGTG-CTA 414
consensus_11627#1      CTGGTGCTGTGGTGGCACTGCCTTGCAAAATGAAGTGCCTGGCAGCCAACACCGTGGCTA 506
                          **  ****    ********* ****** *   * *  ****** *   **** ***

consensus_11627#0      T-AGACTG-AGTTAAA---TTTCTCTTCGTGT--------CATCATCTTCCGT-CAAAGT 795
consensus_11627#2      T-AGACTG-AGTTAAA---TTTCTCTTCGTGT--------CATCATCTTCCGT-CAAAGT 460
consensus_11627#1      TGAGACTGGAGTTGAAATGTTGCTGCTTGCGTGGTGCATGCATGCTGTGCCGTGCAAAGT 566
                       * ****** **** **   ** **  * * **        ***  * * **** ******

consensus_11627#0      TG---TTTCAGATTGCTTTT---TCCCTGTACGTATAAGAGAAAAGTTG----TGTGTTC 845
consensus_11627#2      TG---TTTCAGATTGCTTTT---TCCCTGTACGTATAAGAGAAAAGTTG----TGTGTTC 510
consensus_11627#1      TGGTGTTGCAGATTGCTTTTGTGCCCCTGTACGTATAAGAGAAAAGTTGGTGGTGGTTGC 626
                       **   ** ************    *************************    **  * *

consensus_11627#0      ACATTTT--TCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATG 903
consensus_11627#2      ACCTTTT--TCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATG 568
consensus_11627#1      ACATTGTGTTCTCGTACCGCGTTCTGCTATACGTTGGTGAACTAGTTACGATAATCTATG 686
                       ** ** *  ***************************************************

consensus_11627#0      ATACTGCTTGGACTAAAAAAAAAA------------------------------------ 927
consensus_11627#2      ATACTGCTTGGACTAAAAAAAAAA------------------------------------ 592
consensus_11627#1      ATACTGCTTGGACTATATTTTTTTCTCCCCAGATGAGATATAAACTACTCACCCTGTGTG 746
                       *************** *                                           

consensus_11627#0      ----------
consensus_11627#2      ----------
consensus_11627#1      NTCATAAAAA 756
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)