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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2115 fasta sequence
[CCCCAACACATCACGACTTGTCGAACCCCGCCGCCGCTGCCAGATCGGAGGCGAGAGCTCCGATCCCAAAACCCCCCCGCCCCTCGGCGATGGCGCCGCCGCGCCATCTCCTCCTCCTCCTCCTCCTCGGCTTCCTCGCCGCCGCCTCCCTCGCGTTCACGCTCACCGCCGCCGTGTACGAGGACCAGGTCGGCCTCGCGGACTGGCATCAGAAGTACATCGGCAAAGTAAAGCAGGCAGTCTACCACAGTCAGAAAAGTGGAAGGAGACGTGTTGTGGTGTTGACAGAGGAAAATGTTATTGCTTCTCTTGATCTTCGTTCAGGAGATATATTTTGGAGGCACGTCATTGAGAAGAATGATCCTGTGGATGAGCTTAGTTTATCACTTGGAAAATATGTTGTAACTCTTTCTTCGGGAGGTAGTATATTGAGGGCATGGAATCTTCCTGATGGCCAGATGATCTGGGAAACTAATCTTCAAGTTTCCAAATCATCAAAACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTGTTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTCAACTTATTGTTGATTCTCACTCCCGTGCTCATCTCTATCCAAGATCTCCAGATGCCATGAATGTATTTCTTCATGAAATG-CCAAATACATATCTCTACACTGTAGATATTGAGACAAATGTTATCAGGGGGCATTCATTACAAAAGTCATGTGACAATTCAGCTGATGAGTACTGCTTTAGCACAAAGGAGTTGTGGTCTATTG]
[+] EMBL AK070398 [CCCCAACACATCACGACTTGTCGAACCCCGCCGCCGCTGCCAGATCGGAGGCGAGAGCTCCGATCCCAAAACCCCCCCGCCCCTCGGCGATGGCGCCGCCGCGCCATCTCCTCCTCCTCCTCCTCCTCGGCTTCCTCGCCGCCGCCTCCCTCGCGTTCACGCTCACCGCCGCCGTGTACGAGGACCAGGTCGGCCTCGCGGACTGGCATCAGAAGTACATCGGCAAAGTAAAGCAGGCAGTCTACCACAGTCAGAAAAGTGGAAGGAGACGTGTTGTGGTGTTGACAGAGGAAAATGTTATTGCTTCTCTTGATCTTCGTTCAGGAGATATATTTTGGAGGCACGTCATTGAGAAGAATGATCCTGTGGATGAGCTTAGTTTATCACTTGGAAAATATGTTGTAACTCTTTCTTCGGGAGGTAGTATATTGAGGGCATGGAATCTTCCTGATGGCCAGATGATCTGGGAAACTAATCTTCAAGTTTCCAAATCATCAAAACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTCCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTGTTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTCAACTTATTGTTGATTCTCACTCCCGTGCTCATCTCTATCCAAGATCTCCAGATGCCATGAATGTATTTCTTCATGAAATG CCAAATACATATCTCTACACTGTAGATATTGAGACAAATGTTATCAGGGGGCATTCATTACAAAAGTCATGTGACAATTCAGCTGATGAGTACTGCTTTAGCACAAAGGAGTTGTGGTCTATTG]
[+] EMBL CF307326 [ CCAGATGATCTGGGAAATTAATCTTCAAGTTTCCAAATCATCAAAACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAG ]
[+] EMBL CF325358 [ AACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTNTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAG ]
[+] EMBL CF306818 [ AGG GTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAA ]
[+] EMBL CB632346 [ TCCTTGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAAT ]
[+] EMBL C26305 [ CTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGNACAGA ]
[+] EMBL CB618287 [ CACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTATTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTC ACCTATTGTTGATTCTCACTCCCGTGCT ]
[+] EMBL CB618289 [ CACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTATTCTTGATTCATATTCTGGAGAAGA ]
[+] EMBL OSC5751 [ GTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTGTTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTCAACTTATTGTTGATTCTCACTCCCGTGCTCATCTCTATCCAAGATCTCCAGATGCCATGAATGTATTTCTTCATGAAATGNCCAAATACATATCTCTACACTGTAGNTATTGAGGCAAATGTTATCAG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||