These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2115 fasta sequence [CCCCAACACATCACGACTTGTCGAACCCCGCCGCCGCTGCCAGATCGGAGGCGAGAGCTCCGATCCCAAAACCCCCCCGCCCCTCGGCGATGGCGCCGCCGCGCCATCTCCTCCTCCTCCTCCTCCTCGGCTTCCTCGCCGCCGCCTCCCTCGCGTTCACGCTCACCGCCGCCGTGTACGAGGACCAGGTCGGCCTCGCGGACTGGCATCAGAAGTACATCGGCAAAGTAAAGCAGGCAGTCTACCACAGTCAGAAAAGTGGAAGGAGACGTGTTGTGGTGTTGACAGAGGAAAATGTTATTGCTTCTCTTGATCTTCGTTCAGGAGATATATTTTGGAGGCACGTCATTGAGAAGAATGATCCTGTGGATGAGCTTAGTTTATCACTTGGAAAATATGTTGTAACTCTTTCTTCGGGAGGTAGTATATTGAGGGCATGGAATCTTCCTGATGGCCAGATGATCTGGGAAACTAATCTTCAAGTTTCCAAATCATCAAAACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTGTTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTCAACTTATTGTTGATTCTCACTCCCGTGCTCATCTCTATCCAAGATCTCCAGATGCCATGAATGTATTTCTTCATGAAATG-CCAAATACATATCTCTACACTGTAGATATTGAGACAAATGTTATCAGGGGGCATTCATTACAAAAGTCATGTGACAATTCAGCTGATGAGTACTGCTTTAGCACAAAGGAGTTGTGGTCTATTG] [+] EMBL AK070398 [CCCCAACACATCACGACTTGTCGAACCCCGCCGCCGCTGCCAGATCGGAGGCGAGAGCTCCGATCCCAAAACCCCCCCGCCCCTCGGCGATGGCGCCGCCGCGCCATCTCCTCCTCCTCCTCCTCCTCGGCTTCCTCGCCGCCGCCTCCCTCGCGTTCACGCTCACCGCCGCCGTGTACGAGGACCAGGTCGGCCTCGCGGACTGGCATCAGAAGTACATCGGCAAAGTAAAGCAGGCAGTCTACCACAGTCAGAAAAGTGGAAGGAGACGTGTTGTGGTGTTGACAGAGGAAAATGTTATTGCTTCTCTTGATCTTCGTTCAGGAGATATATTTTGGAGGCACGTCATTGAGAAGAATGATCCTGTGGATGAGCTTAGTTTATCACTTGGAAAATATGTTGTAACTCTTTCTTCGGGAGGTAGTATATTGAGGGCATGGAATCTTCCTGATGGCCAGATGATCTGGGAAACTAATCTTCAAGTTTCCAAATCATCAAAACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTCCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTGTTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTCAACTTATTGTTGATTCTCACTCCCGTGCTCATCTCTATCCAAGATCTCCAGATGCCATGAATGTATTTCTTCATGAAATG CCAAATACATATCTCTACACTGTAGATATTGAGACAAATGTTATCAGGGGGCATTCATTACAAAAGTCATGTGACAATTCAGCTGATGAGTACTGCTTTAGCACAAAGGAGTTGTGGTCTATTG] [+] EMBL CF307326 [ CCAGATGATCTGGGAAATTAATCTTCAAGTTTCCAAATCATCAAAACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAG ] [+] EMBL CF325358 [ AACCTCTTCTGCATGTTTTGTCAAACAACAAAGTAGCAAAGGATAATCTGGTTTTTGTGTTGGCTGGACGATGGATTTATGCCGTATCAAGCATTGATGGGGTAATTTCTTGGGGAAAGGAGTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTNTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAG ] [+] EMBL CF306818 [ AGG GTTCTCCCTTGATGGCCTAGATCTCAAGCAGATTATTCAATCACCTGAGAATGATATTGTATATGCTGTAGGACTTGCTGGTTCCTCGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAA ] [+] EMBL CB632346 [ TCCTTGAAGCTAAACTTGTATCAGTTGAATGCTAAAACTGGAGAAACAGTAAAGCATATACAAGAGTCATTCCCTATTGCATTATGTGGTGAAACAATACTTGGTTCTCATAATGTGTTGGTAGCTTTAGATGAGACCAGGTCAGATCTATTTCTTATTGAGCTCAAGGGTGAGAGCATCAGCTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAAT ] [+] EMBL C26305 [ CTACAACAAGGTCCATATTTCAGATCTTGTTCAAGACTTATCTGGAACAGTCAAACTTCTACCTTTAATGTCCAATGGTGTCATAGCTTTGCAAGCATCTTCTACTGTTTCCCTTCTGAAACTTAAAGGAATCGATGGGTTGGAAGTAATTCAGAGCTTTGAACAACCAGCTGCTGTGAGTGATGCGTTGACAATCACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGNACAGA ] [+] EMBL CB618287 [ CACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTATTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTC ACCTATTGTTGATTCTCACTCCCGTGCT ] [+] EMBL CB618289 [ CACAGAAAAAGACGAAGCTTTTGCCGTTGTGCAGCATACAGGTTCTGAAATCGAATTTGTCGTCAAATTTACAAGTGATGTCACCGGTGAAGTTATTAGAGAAAAAATTAATATAGATCAACATAGGGGCAATATTCAAAAGGTCTTCTTGAATAACTATATCCGAACAGATAAATCACATGGTTTTCGAGCTTTGGTTGTAATGGAAGATCATTCACTCTTGTTGGTCCAACAAGGGGAGGTTGTTTGGAGCAGAGAGGATGGACTTGCATCAATTGTTGATGTAACAACTTCTGAATTGCCTATTGAGAAGGATGGTGTCTCAGTTGCTAATGTGGAACATAATCTCTTTGAATGGCTGAAGGGACACATGCTGAAACTCAAGGGAACTCTAATGCTTGCCAATGCTGATGAACTTGCTGCAATTCAAGCAATGAGACTGAAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTAGGAAACTTCTTATTGTATTGACAAAGGCTGGAAAAGTGATAGCCCTGCACACTGGAGATGGACGTATTATCTGGTCAAACTTGTTGCAGTCCCTTCGTTCCTCCAAGTCTGGTGAAATGCCTTCTGCCTTAAGAATATGTCAATGGCAGGTTCCCCATCATCGTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTATTCTTGATTCATATTCTGGAGAAGA ] [+] EMBL OSC5751 [ GTGTGATGCATGAGAACCCATCCATACTTATCATTGGTAGATCTGGAGCAGATAGTGCTGCTCCTGGTGTCCTATCTGTTCTTGATTCATATTCTGGAGAAGAACTTAACTCTCTGAAGTTAGACCACTCTGTTGTCCAAATTATCCCATTGACAGTGAAGGATTCATCTGAACATCGGCTTCAACTTATTGTTGATTCTCACTCCCGTGCTCATCTCTATCCAAGATCTCCAGATGCCATGAATGTATTTCTTCATGAAATGNCCAAATACATATCTCTACACTGTAGNTATTGAGGCAAATGTTATCAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||