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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11642#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1722 fasta sequence
[AGATTCGCGCGGCCGCTCGCCATGTCGTCGCCGTCGCCGGCGTTGTGCGCCGCCGCCTCCTGCTCCACCCCGCTTCGCGTTGCGTCGCCTGTCGTTCGGTTCCGCCGCCCCGGCGCGCCCGCGCCCGTCGTATCCGCGGCGCGCGCGTCGTCGGCGGCGGTCCCGGCCGTCTCCGACGACCTCGTCCTCCGCATCGCGGAGCAGCTGGAGGACTCGGTCGCGGCCTCCTCGCCGCTCCTCGACCCGCTCCGCTCCGCCTCCGCGCTCTCCCTCCTCTCCACGCGCTGGCCAACCCGCCGCTCCAACGAGGCCTACCGCTTCACCGACATCTCCTACCTCCGCTCCCTCCCCATCTCCCTCCCCTCCCGGGACGCCCCCGCCGTCGCGCCGCCCGCCTCCCCCTACGCCTCCCACGTCCACTTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCCCTCGCGGACCTCCCGCCTGGCCACGTCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCCGCGGGATTCGCCGACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTCGTGGTCGTGCACGTGCCGGAGGGGGTAAGTATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATGATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGTTATTGGGCTAATCCGGTGATGGAGATCATCGTGGAGGAGGATGCGAAGGTGGTGCATTCCTATGTGCAGCAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTCCAGCAGAATACATCTAGCAACTATGAGTTTGTTGAGGTGAGCATTGGAGCAAGATTGAACAGGCACAATCTCCACATCCAGCAGTTGGGCCCTGAGACCAACACACAATTGTCAACGTTCCACTTCTCAGCGCAGAATAAACAGATACATGATCTTCATAGCAAGCTTATACTTGATCACCCAAGAGGTCGTTCACAACAGATACATAGATTGATTGCTTCTGGTACAGGGAATGGCATATTTGATGGAAATATCAAAGTGAACAGATATGCACAACAAACTGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATCTACTTCTTGCAAGCAAGAGGCATCGATGCTAAAACAGCGGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCTTCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGAACATTAGAAGATTTTTGGTGAAACACGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCAGTTAATTTGTGAACCACTTGTTCATTACATGTTGAATCAAGCATGCATGATGGTTGTGAGGCAGATTATAAATCTTTGCTTTACATGAAATTAGGGA]
[+] EMBL AK068846 [AGATTCGCGCGGCCGCTCGCCATGTCGTCGCCGTCGCCGGCGTTGTGCGCCGCCGCCTCCTGCTCCACCCCGCTTCGCGTTGCGTCGCCTGTCGTTCGGTTCCGCCGCCCCGGCGCGCCCGCGCCCGTCGTATCCGCGGCGCGCGCGTCGTCGGCGGCGGTCCCGGCCGTCTCCGACGACCTCGTCCTCCGCATCGCGGAGCAGCTGGAGGACTCGGTCGCGGCCTCCTCGCCGCTCCTCGACCCGCTCCGCTCCGCCTCCGCGCTCTCCCTCCTCTCCACGCGCTGGCCAACCCGCCGCTCCAACGAGGCCTACCGCTTCACCGACATCTCCTACCTCCGCTCCCTCCCCATCTCCCTCCCCTCCCGGGACGCCCCCGCCGTCGCGCCGCCCGCCTCCCCCTACGCCTCCCACGTCCACTTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCCCTCGCGGACCTCCCGCCTGGCCACGTCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCCGCGGGATTCGCCGACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTCGTGGTCGTGCACGTGCCGGAGGGGGTAAGTATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATGATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGTTATTGGGCTAATCCGGTGATGGAGATCATCGTGGAGGAGGATGCGAAGGTGGTGCATTCCTATGTGCAGCAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTCCAGCAGAATACATCTAGCAACTATGAGTTTGTTGAGGTAAGCATTGGAGCAAGATTGAACAGGCACAATCTCCACGTCCAGCAGTTGGGCCCTGAGACCAACACACAATTGTCAACGTTCCACTTCTCAGCGCAGAATAAACAGATACATGATCTTCATAGCAAGCTTATACTTGATCACCCAAGAGGTCGTTCACAACAGATACATAGATTGATTGCTTCTGGTACAGGGAATGGCATATTTGATGGAAATATCAAAGTGAACAGATATGCACAACAAACTGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATCTACTTCTTGCAAGCAAGAGGCATCGATGCTAAAACAGCGGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCTTCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGAACATTAGAAGATTTTTGGTGAAACACGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCAGTTAATTTGTGAACCACTTGTTCATTACATGTTGAATCAAGCATGCATGATG ]
[+] EMBL CB673322 [ GCCGCCGCCTCCTGCTCCACCCCGCTTCGCGTTGCGTCGCCTGTCGTTCGGTTCCGCCGCCCCGGCGCGCCCGCGCCCGTCGTATCCGCGGCGCGCGCGTCGTCGGCGGCGGTCCCGGCCGTCTCCGACGACCTCGTCCTCCGCATCGCGGAGCAGCTGGAGGACTCGGTCGCGGCCTCCTCGCCGCTCCTCGACCCGCTCCGCTCCGCCTCCGCGCTCTCCCTCCTCTCCACGCGCTGGCCAACCCGCCGCTCCAACGAGGCCTACCGCTTCACCGACATCTCCTACCTCCGCTCCCTCCCCATCTCCCTCCCCTCCCGGGACGCCCCCGCCGTCGCGCCGCCCGCCTCCCCCTACGCCTCCCACGTCCACTTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCCCTCGCGGACCTCCCGCCTGGCCACGTCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCCGCGGGATTCGCCGACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTCGTGGTCGTGCACGTGCCGGAGGGGGTAAGTATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATGATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGTTAT ]
[-] EMBL CB629188 [ TACATCTAGCAACTATGAGTTTGTTGAGGTGAGCATTGGAGCAAGATTGAACAGGCACAATCTCCACATCCAGCAGTTGGGCCCTGAGACCAACACACAATTGTCAACGTTCCACTTCTCAGCGCAGAATAAACAGATACATGATCTTCATAGCAAGCTTATTCTTGATTACCCAAGAGGTCGTTCACAACAGATACATAGATTGATTGCTTCTGGCACAGGGAATGGTGTATTTGATGGAAATATCAAAGTGAACAGATATGCCCAACAGACTGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATTTACTTCTTGCAAGCAAGAGGAATCGATGCTAAAACAGCAGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCATCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGAACATTAGAAGATTTTTGGTGAAACACGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCAGTTAATTTGTGAACCACTTGTTCATTACATGTTGAATCAAGCATACATGATGGTTGTGAGGCAGATTATAAATCTTTGCTTTACAT ]
[-] EMBL CB629186 [ GAGGTGAGCATTGGAGCAAGATTGAACAGGCACAATCTCCACATCCAGCAGTTGGGCCCTGAGACCAACACACAATTGTCAACGTTCCACTTCTCAGCGCAGAATAAACAGATACATGATCTTCATAGCAAGCTTATTCTTGATTACCCAAGAGGTCGTTCACAACAGATACATAGATTGATTGCTTCTGGCACAGGGAATGGTGTATTTGATGGAAATATCAAAGTGAACAGATATGCCCAACAGACTGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATTTACTTCTTGCAAGCAAGAGGAATCGATGCTAAAACAGCAGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCATCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGAACATTAGAAGATTTTTGGTGAAACACGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCAGTTAATTTGTGAACCACTTGTTCATTACATGTTGAATCAAGCATGCATGATAATGGTGAGGCAGATTATAAATCTTTGCTTTACAGGAAATTAGGGA]
[-] EMBL CB673323 [ ACACAATTGTCAACGTTCCACTTCTCAGCGCAGAATAAACAGATACATGATCTTCATAGCAAGCTTATACTTGATCACCCAAGAGGTCGTTCACAACAGATACATAGATTGATTGCTTCTGGTACAGGGAATGGCATATTTGATGGAAATATCAAAGTGAACAGATATGCACAACAAACTGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATCTACTTCTTGCAAGCAAGAGGCATCGATGCTAAAACAGCGGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCTTCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGAACATTAGAAGATTTTTGGTGAAACACGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCAGTTAATTTGTGAACCACTTGTTCATTACATGTTGAATCAAGCATGCATGAAGGTTGTGAGGCAGATTATATATCTTTGC ]
[+] EMBL AU174861 [ TGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATCTACTTCTTGCAAGCAAGAGGCATCGATGCTAAAACAGCGGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCTTCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGAACATTAGAAGATTTTTGGTGAAACACGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAaaaaaaa ]
consensusID : consensus_11642#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 806 fasta sequence
[ATGAACGCTGGCGGCATGCTTACCATTTGCAAGTCGAACGGGAAGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGAAATCCGCCCAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCCACGTCCACTTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCCCTCGCCGACCTCCCGCCTGGCCACGCCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCCGCAGGATTCGCCGACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTCGTGGTCGTGCACGTGCCGGAGGGGGTAAGTATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATTATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGCTATTGGGCTAATCCGGTGATGGAGATCATCGTGGAAGAGGATGCGAAGGTGGTGCATTCCTATGTGCAGCAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTCCAGCAGAATACATCTAGCAACTATGAGTTTGTTGAGGTGAGCATTGGAGCA]
[+] EMBL CB629187 [ATGAACGCTGGCGGCATGCTTACCATTTGCAAGTCGAACGGGAAGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGAAATCCGCCCAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCCACGTCCACTTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCCCTCGCCGACCTCCCGCCTGGCCACGCCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCCGCAGGATTCGCCGACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTCGTGGTCGTGCACGTGCCGGAGGGGGTAAGTATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATTATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGCTATTGGGCTAATCCGGTGATGGAGATCATCGTGGAAGAGGATGCGAAGGTGGTGCATTCCTATGTGCAGCAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTCCAGCAGAATACATCTAGCAACTATGAGTTTGTTGAGGTGAGCATTGGAGCA]
[+] EMBL CB629185 [ TGAACGCTGGCGGCATGCTTAACCCTTGCAAGTCGAACGGGAAGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGAAATCCGCCCAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCATACTCCCACGTCCACTTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCCCTCGCCGACCTCCCGCCTGGCCACGCCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCCGCAGGATTCGCCGACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTCGTGGTCGTGCACGTGCCGGAGGGGGTAAGTATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATTATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCANGAGGACGGTGGGTGCTATTGGGCTAATCCGGTGATGGAGATCATCGTGGAAGAGGATGCTAAGGTGGTGC ]
consensusID : consensus_11642#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence
[GTCTGTATCTCGGATTTCCCAGGAGGGTTGTTCACCAAACCTGGATAGAGTGGCTTGCTCTGGCACAGCAAATGGTTTTTTGCTGGTAGTTTCAACGTGAGCAGGTTATGCGCAACGGCCTGGCCCGGGGCGGGAACGAGGGGTTATTCCGGGTCATCGAAGGCCGTTGTTAATGTGAACCCAAACCTTCAGGTCATGGGTTGTGATGTCAAATGTCCACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGGTTTGCTTTTTGCAAGCAAGAGGAGTCGATGCTAAAACAGCAGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATCCCATTCAAGCCCATAGAGAAAAAGGCATTAGCTCGTTTCAGAGCGTTGTTGGCATCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGACCATTAGAAGATTTTTGGTGAAACGCGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCAGTTAATTTGTGAACCACTTGTTCATTACATGTTGAATCAAGCATACATGATGCTTGTGAGGCAGATTATAAATCTTTGCTTTCCATAAAAAAAAAAAA]
[-] EMBL CA760137 [GTCTGTATCTCGGATTTCCCAGGAGGGTTGTTCACCAAACCTGGATAGAGTGGCTTGCTCTGGCACAGCAAATGGTTTTTTGCTGGTAGTTTCAACGTGAGCAGGTTATGCGCAACGGCCTGGCCCGGGGCGGGAACGAGGGGTTATTCCGGGTCATCGAAGGCCGTTGTTAATGTGAACCCAAACCTTCAGGTCATGGGTTGTGATGTCAAATGTCCACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGGTTTGCTTTTTGCAAGCAAGAGGAGTCGATGCTAAAACAGCAGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATCCCATTCAAGCCCATAGAGAAAAAGGCATTAGCTCGTTTCAGAGCGTTGTTGGCATCCTCAAGACAAAACGACGAATGAGGCCCTCATTATTGTTATGGAGCCAGTTCAACATTTTTCTTTTATCAAAATGAGAAATATAGAAAGACCATTAGAAGATTTTTGGTGAAACGCGACGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCAGTTAATTTGTGAACCACTTGTTCATTACATGTTGAATCAAGCATACATGATGCTTGTGAGGCAGATTATAAATCTTTGCTTTCCATAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11642#0 AGATTCGCGCGGCCGCTCGCCATGTCGTCGCCGTCGCCGGCGTTGTGCGCCGCCGCCTCC 60
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 TGCTCCACCCCGCTTCGCGTTGCGTCGCCTGTCGTTCGGTTCCGCCGCCCCGGCGCGCCC 120
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 GCGCCCGTCGTATCCGCGGCGCGCGCGTCGTCGGCGGCGGTCCCGGCCGTCTCCGACGAC 180
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 CTCGTCCTCCGCATCGCGGAGCAGCTGGAGGACTCGGTCGCGGCCTCCTCGCCGCTCCTC 240
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 GACCCGCTCCGCTCCGCCTCCGCGCTCTCCCTCCTCTCCACGCGCTGGCCAACCCGCCGC 300
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 TCCAACGAGGCCTACCGCTTCACCGACATCTCCTACCTCCGCTCCCTCCCCATCTCCCTC 360
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 CCCTCCCGGGACGCCCCCGCCGTCGCGCCGCCCGCCTCCCCCTACGCCTCCCACGTCCAC 420
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 TTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCCCTCGCGGACCTC 480
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 CCGCCTGGCCACGTCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCCGCGGGATTCGCC 540
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 GACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTCGTGGTCGTGCAC 600
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 GTGCCGGAGGGGGTAAGTATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGC 660
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 TGCGGCGATGGTAGTATGATGATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGG 720
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 GCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGTTATTGGGCT 780
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 AATCCGGTGATGGAGATCATCGTGGAGGAGGATGCGAAGGTGGTGCATTCCTATGTGCAG 840
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 CAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTCCAGCAGAATACATCTAGC 900
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 AACTATGAGTTTGTTGAGGTGAGCATTGGAGCAAGATTGAACAGGCACAATCTCCACATC 960
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 ------------------------------------------------------------
consensus_11642#0 CAGCAGTTGGGCCCTGAGACCAACACACAATTGTCAACGTTCCACTTCTCAGCGCAGAAT 1020
consensus_11642#2 ------------------------------------------------------------
consensus_11642#1 -------------------ATGAACGCTGGCGGCATGCTTACCATTTGCAAGTCGAACGG 41
consensus_11642#0 AAACAGATACATGATCTTCATAGCAAGCTTATACTT-----GATCACCCAAGAGG-TCGT 1074
consensus_11642#2 --------------------------GTCTGTATCTCG---GATTTCCCAGGAGGGTTGT 31
consensus_11642#1 GAAGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGG 101
* ** ** * ** *
consensus_11642#0 TCACAACAGATACATAGATTGATT--GCTTCTG------GTACAGGGAATGGCA-TATTT 1125
consensus_11642#2 TCACCAAACCTGGATAGAGTGGCT--TGCTCTG------GCACAGCAAATGGT--TTTTT 81
consensus_11642#1 GAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGAAATCC 161
** * * * * * * * * * * ** ** ** *
consensus_11642#0 GAT-----GGAAATATCAAAGTGAACAGAT-ATGCACAACAAACTGAC---GCAGGGCAA 1176
consensus_11642#2 GCT-----GGTAGTTTCAACGTGAGCAGGTTATGCGCAACGGCCTGGC---CCGGGGCG- 132
consensus_11642#1 GCCCAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGA 221
* * *** ** * * * * * * ***
consensus_11642#0 GAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACT--TGTTAATGTGA----AGCCAAAC 1230
consensus_11642#2 GGAACGAGGGGTTATTCCGGGTCATCGAAGGCCGT--TGTTAATGTGA----ACCCAAAC 186
consensus_11642#1 TGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGAC 281
* * * * ** ** ** * ** ** *** **
consensus_11642#0 CTTCAGATCATTGCTGATGATGTCAA----ATGTACACATGGAGCTGCCAT-------CA 1279
consensus_11642#2 CTTCAGGTCATGGGTTGTGATGTCAA----ATGTCCACATGGAGCTGCCAT-------CA 235
consensus_11642#1 TCCCACGTCCACTTCTCCGATGGCGTCCTCACCTCCTCCTCGGGCGCCCACGTCTCCGCC 341
** ** **** * * * * * * * ** *** *
consensus_11642#0 GTGGTGAACATG--ATCCAAATGCGATCTACTTCTTGCAAGCAAGA-----GGCATCGAT 1332
consensus_11642#2 GTGGTGAACATG--ATCCAAATGCGGTTTGCTTTTTGCAAGCAAGA-----GGAGTCGAT 288
consensus_11642#1 CTCGCCGACCTCCCGCCTGGCCACGCCCGGGACCGTGCGGCCGCCGCTCTCGCCGCCTCC 401
* * ** * * ** *** * * *
consensus_11642#0 GCTAAAACAGCGGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATA 1392
consensus_11642#2 GCTAAAACAGCAGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATC 348
consensus_11642#1 GCAGGATTCGCCGACAAGGACCTCTTCTTCGACTTCAACGCCGTTGGCGCGAAGGATGTC 461
** * ** * * * *** **** *** *** ** ** * *
consensus_11642#0 CCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCTTCCTCA 1452
consensus_11642#2 CCATTCAAGCCCATAGAGAAAAAGGCATTAGCTCGTTTCAGAGCGTTGTTGGCATCCTCA 408
consensus_11642#1 GTGGTCGTGCACGTGCCGGAGGGGGTA--AGTATGGCCGACGACCCGGTGCACATCATGT 519
** ** * * * * * * ** * * ** * ** *
consensus_11642#0 AGACAAAACGACGAATGAGGCCCTCAT--TATTGTTATGGAGCCAGTTCAACATTTTTCT 1510
consensus_11642#2 AGACAAAACGACGAATGAGGCCCTCAT--TATTGTTATGGAGCCAGTTCAACATTTTTCT 466
consensus_11642#1 TCA-GTTACAGTGGCTGCGGCGATGGTAGTATGATTATGTCGA-ACCCGAGGGTTCTCGT 577
* ** * ** *** * * *** ***** * * * ** * *
consensus_11642#0 TTTATCAAAATGAGAAATATAGAAAG--AACATT-AGAAGATTTTTGGT--GAAACACGA 1565
consensus_11642#2 TTTATCAAAATGAGAAATATAGAAAG--ACCATT-AGAAGATTTTTGGT--GAAACGCGA 521
consensus_11642#1 TGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGG 637
* * * * * ** * * **** ** ** ****** * * **
consensus_11642#0 CGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCA 1625
consensus_11642#2 CGAGAAACAGATAACTGTTTTGCAATGTCAAGAGTGATGTTATTCTAGCATGTAAAGTCA 581
consensus_11642#1 TGGGTGCTATTGGGCTAATC--CGGTGATGGAGATCATCGTGGAAGAGGATGCGAAGGTG 695
* * * ** * * ** * ** * ** *** ***
consensus_11642#0 GTTAATT----TGTGAACCACTTGTTCATTACATGT---TGAATCAAGCATGCATGATGG 1678
consensus_11642#2 GTTAATT----TGTGAACCACTTGTTCATTACATGT---TGAATCAAGCATACATGATGC 634
consensus_11642#1 GTGCATTCCTATGTGCAGCAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTC 755
** *** **** * ** ** ** * * * **** *
consensus_11642#0 TTGTGAGGCAGATTATAAATCTTTGCTTTACATGAAATTAGGGA------- 1722
consensus_11642#2 TTGTGAGGCAGATTATAAATCTTTGCTTTCCATAAAAAAAAAAAA------ 679
consensus_11642#1 CAGCAGAATACATCTAGCAACTATGAGTTTGTTGAGGTGAGCATTGGAGCA 806
* * ** * ** ** ** * * *
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||