cluster # 1165

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Oryza sativa
cluster # 1165 cluster # 1165 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1165#0 length = 758 sequences # 2

consensusID : consensus_1165#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 758
fasta sequence

                              [CCTTACTAGATCGTTCTAGCCGCTGCAGAGAATAGTATATTCTTAGCCTCTTAGGCCATGAAGTGTTTACCGGTTGCTTTCAATCTTGCTCTCGTGTTCGTTCTGGCCATTCCATTACTCCTCGAAGCTCGACCACTTGCTAGTGGTGATCAAGATTATGAAAATCTCCCTGTACTTACCACAGTCACAGTAGAGGAAACCACGCAGGTTATGGTGGACTACTTGGACCTAAACGGAAGCAGTAGTGACGGTGAGGACGACGAAGCTGCCCAAGGATCGCCGCCGGACGCGGGTTGCGCCGGCCGGCGGCAACGCCGCCGTTCGCCGCANGGGGCGTTTACCCGCCTCAGCATCAGCAGAAGCCGGCG-CCCTGT-AGTGGTGGCCCAGCTGGGGTTGTAGGCGGGCGCAGGCCGTCTGCTCCACCGGCG-CCCCGTGGACGGAGCCCGCCGCATTGGGTCCGGTCAAGTGATCAGCAAGGCCCATGGCTGCTCGACGTATTCCACCGCCTGCTCTGTGCATTAACTGGGCTGANAGGTCAGACAGGTAGTATGGGATATGTTGAGGTTTGGAAAACCTTCCGGCATGTACACCTGAACGAGGAGTAGATATTAACGTGTGTGCACTGTGTACGTGTTGAGATGCATGCACACATACGTGCACGCGCACGGTGATCAACCGAACGCCCTTTCGCGTTTCATTTTGTACGCACACAGTGTCACTGCTTTCCTTTTTATAGAAACTTTATACTCATAAAAAAA]

[+] EMBL AU057005             [CCTTACTAGATCGTTCTAGCCGCTGCAGAGAATAGTATATTCTTAGCCTCTTAGGCCATGAAGTGTTTACCGGTTGCTTTCAATCTTGCTCTCGTGTTCGTTCTGGCCATTCCATTACTCCTCGAAGCTCGACCACTTGCTAGTGGTGATCAAGATTATGAAAATCTCCCTGTACTTACCACAGTCACAGTAGAGGAAACCACGCAGGTTATGGTGGACTACTTGGACCTAAACGGAAGCAGTAGTGACGGTGAGGACGACGAAGCTGCCCAAGGATCGCCGCCGGACGCGGGTTGCGCCGGCCGGCGGCAACGCCGCCGTTCGCCGCANGGGGCGTTTACCCGCCTCAGCATCAGCAGAAGCCGGCG CCCTGT AGTGGTGGCCCAGCTGGGGTTGTAGGCGGGCGCAGGCCGTCTGCTCCACCGGCG CCCCGTGGACGGAGCCCGCCGCATTGGGTCCGGTCAAGTGATCAGCAAGGCCCATGGCTGCTCGACGTATTCCACCGCCTGCTCTGTGCATTAACTGGGCTGANAGGTCAGACAGGTAGTATGGGATATGTTGAGGTTTGGAAAACCTTCCGGCATGTACACCTGAACGAGGAGTAGATATTAACGTGTGTGCACTGTGTACGTGTTGAGATGCATGCACACATACGTGCACGCGCACGGTGATCAACCGAACGCCCTTTCGCGT                                                                 ]
[+] EMBL AU057006             [                                                                                                                                                                                                                                                                                                                                                                             GCGCCCCTNTAAGTGGTGGCCCANCTGGGGTTGTAGGCGGGCGCAGGCCGTCTGCTCCACCGGCGCCCCCNTGGACGGAGCCCGCCGCATTGGGTCCGGTCAAGTGATCAGCAAGGCCCATGGCTGCTCGACGTATTCCACCGCCTGCTCTGTGCATTAACTGGGCTGACAGGTCAGACAGGTAGTATGGGATATGTTGAGGTTTGGAAAACCTTCCGGCATGTACACCTGAACGAGGAGTAGATATTAACGTGTGTGCACTGTGTACGTGTTGAGATGCATGCACACATACGTGCACGCGCACGGTGATCAACCGAACGCCCTTTCGCGTTTCATTTTGTACGCACACAGTGTCACTGCTTTCCTTTTTATAGAAACTTTATACTCATAAAAAAA]




>consensus_1165#0
CCTTACTAGATCGTTCTAGCCGCTGCAGAGAATAGTATATTCTTAGCCTCTTAGGCCATG
AAGTGTTTACCGGTTGCTTTCAATCTTGCTCTCGTGTTCGTTCTGGCCATTCCATTACTC
CTCGAAGCTCGACCACTTGCTAGTGGTGATCAAGATTATGAAAATCTCCCTGTACTTACC
ACAGTCACAGTAGAGGAAACCACGCAGGTTATGGTGGACTACTTGGACCTAAACGGAAGC
AGTAGTGACGGTGAGGACGACGAAGCTGCCCAAGGATCGCCGCCGGACGCGGGTTGCGCC
GGCCGGCGGCAACGCCGCCGTTCGCCGCANGGGGCGTTTACCCGCCTCAGCATCAGCAGA
AGCCGGCGCCCTGTAGTGGTGGCCCAGCTGGGGTTGTAGGCGGGCGCAGGCCGTCTGCTC
CACCGGCGCCCCGTGGACGGAGCCCGCCGCATTGGGTCCGGTCAAGTGATCAGCAAGGCC
CATGGCTGCTCGACGTATTCCACCGCCTGCTCTGTGCATTAACTGGGCTGANAGGTCAGA
CAGGTAGTATGGGATATGTTGAGGTTTGGAAAACCTTCCGGCATGTACACCTGAACGAGG
AGTAGATATTAACGTGTGTGCACTGTGTACGTGTTGAGATGCATGCACACATACGTGCAC
GCGCACGGTGATCAACCGAACGCCCTTTCGCGTTTCATTTTGTACGCACACAGTGTCACT
GCTTTCCTTTTTATAGAAACTTTATACTCATAAAAAAA

clustalw multiple alignements is not computed in this case