These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11662#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2796 fasta sequence [AAAAAGAGAGAGTAGTTCTTGCAATCTTGCTTCGCCTGCAAGGAATCCTCTCCGGCTCTCCGCCCTGGAGGAAGTACAGTGATCAAATTAAGCTTTGGGGGTGGAGTAGACTAATCCTGCTGAACAAAATAGCCCAGGAGGAAAAAAACGGTTTATTCTGCTACCATGGAAGTTCTTAATACCAATGATCATGGGACTGCAAGAACACGGGATGGTGAAGAGACAGCATCTGTTCCAGTTGAGAATCCTGATTCATCGCATGAAATGGAGAAGAAGTTAACCCACAATTTGACAGAAAATGGGCAGGCTCCTACAGGTCATACTGTACCTTCATTACCGGATACGGTCTCTAAATTGAAACCAGCTCAGGAATCTGATGATTCTTTGAAAGATAAGACAGACCTTCCTACTTCAACAAGTAAGACCGAAGTGAACAATATATCTGAAAATGGTTCGACCAACCAGAGCACTATGCTATCAGATGAATCGAGAACAAAAGAAGACAAGATGAATCATCAC-GAGAACATTGCTGCCACCACAAACAAAAAGGCAGAAACAGATGCGAGACCTGAAAGTCCATACAGAGGTCTCATTGACACTGCTGCGCCATTTGAGTCAGTTAGAGAGGCTGTCACCAAGTTCGGAGGAATTGTTGATTGGAAAGCATACAGATCTCAGACACTAGAGAGGCGCAGGGTCATGCAGCTTGAACTTGAAAAGGCTCAACAAGAGATTCCACAATTCAAACAAGATTCAGAAGCTTGTGAGATGGCCAAGTTACAAGTGGTTGAGGAGCTAGGGAGAACTAGGAGACTTGTAGAGGAGCTGAAACACAAACTGGAGAGAGCAGAGATTGATGTGGACCAGGCAAAGCAGGATTCCGAACTTGCGCAGCTGCGGGCACAAGAAATGGAGCAGGGGATTGACGATGAAGCTAGCGTAATAGCCCAAACACAATTGGCAGTTGCTAAAGAGAGACATCAGAAGGCTGTTGATGAACTGAAGTTGGTCAAGGAGGAGATGAGATCAACACACGAAAAGCATACCGTTTTAGCTAGCGAAAGGGACATAGCAGCCAAAAGAGCCGAGCAAGCTATTTCTGCTGCAAAGGAGACTGAGAAGAGAGTTGAGGAACTCACTTTAGAACTTATCGCAATCAAAGAGTCTCTCGAGTCAGCCCATGCCGCGCATCATGAAGCAGAAGAACACAAGCTCGGGGCGGCTTTGGCAAAAGAGCAGGATTGCCTGGCTTGGGAGAAGGAACTGCAGCAAGCACAGGAGGAGTTGCAGCAACTCAACATGCAACTTGTATCAAAAACTGATGCAA-AGTCCAAAATTGATGAAAATACGCACATGCTACAAATCCTCAGTAAGGAGCTGGCTGCCTATACAGAAAACAAAATGAGTGAAGAAGCTGGAGTGATCGAGGAGGATGGTTCTGATGAGGCTAAAGAAATTAGCAGGTCAATCAAGCGAGCCCTTGCTTCAACAAGAAAGGAGCTTGAAGGGGTTAGAGGAAATATTGAAAAGGCAAAAGACGAAACCAATTTAATAAGAGCTATTGCAGAATCAATTAAGTCAGAGGTGGATAAAGAGAAAGCTTCACTTGTTACATTGCAGCAGCGAGAAGGTATGGCATCCATAGCCGTCTCTTCTCTGGAAGCTGAGCTCAATAGGACAAAAGAAGAGATAGAAATGGTGTACATCAAGGAAGCGGAAACCCGTGAAAAAATGGCAGAGCTTCCAAAGATGCTGCAGCAAGCAGCTCAGGAAGCAGAAGACGCCAAGGTGGCACCTCATTCTGCACAGGAAGAACTTCGAAAGGCGAAAGAAGAAGCCGAGCAAACCAAGGCCGCTGCCGCGACTGCAGAGATCAGGTTACGCGCCGTTCTGAAAGAAATAGAGGCCTCTAAAGCATCCGAGAAGCTTGCCCTTGTGGCGGCTCAAGCATTGCAAGAGAGCGAGGAGACAAGTAGTGTTGAGGATTCCCCTAGAACCATTACACTTCCTATAAGTGAATATCATTCTCTGAGCAAGAGGGTCTACGAAGCCGAAGAGCTTGCGAATGAGAGGGTGGCCGCGGCATTGGCGCAAATAGAGCTAGCAAAAGAGTCTGAAACAAGGACCCTGGAGAGATTGCAACAAGAAACCAAAGAGATGCACAAGAAGAAGGATGCTCTTCAAATCGCACTGCAGAGGGCTGACAGGGCAAAGGAAGGAAAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTCGGAAAGCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAGGGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGTAGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAAATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAGGCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTGGTGTGGATACGTGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATATGTATGTCTGTTTCTGATGTTAGTCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTCAATTATGAAAACAGATTGAAGTTTGAATACGTGATTCAAGT] [+] EMBL AK100564 [AAAAAGAGAGAGTAGTTCTTGCAATCTTGCTTCGCCTGCAAGGAATCCTCTCCGGCTCTCCGCCCTGGAGGAAGTACAGTGATCAAATTAAGCTTTGGGGGTGGAGTAGACTAATCCTGCTGAACAAAATAGCCCAGGAGGAAAAAAACGGTTTATTCTGCTACCATGGAAGTTCTTAATACCAATGATCATGGGACTGCAAGAACACGGGATGGTGAAGAGACAGCATCTGTTCCAGTTGAGAATCCTGATTCATCGCATGAAATGGAGAAGAAGTTAACCCACAATTTGACAGAAAATGGGCAGGCTCCTACAGGTCATACTGTACCTTCATTACCGGATACGGTCTCTAAATTGAAACCAGCTCAGGAATCTGATGATTCTTTGAAAGATAAGACAGACCTTCCTACTTCAACAAGTAAGACCGAAGTGAACAATATATCTGAAAATGGTTCGACCAACCAGAGCACTATGCTATCAGATGAATCGAGAACAAAAGAAGACAAGATGAATCATCAC GAGAACATTGCTGCCACCACAAACAAAAAGGCAGAAACAGATGCGAGACCTGAAAGTCCATACAGAGGTCTCATTGACACTGCTGCGCCATTTGAGTCAGTTAGAGAGGCTGTCACCAAGTTCGGAGGAATTGTTGATTGGAAAGCATACAGATCTCAGACACTAGAGAGGCGCAGGGTCATGCAGCTTGAACTTGAAAAGGCTCAACAAGAGATTCCACAATTCAAACAAGATTCAGAAGCTTGTGAGATGGCCAAGTTACAAGTGGTTGAGGAGCTAGGGAGAACTAGGAGACTTGTAGAGGAGCTGAAACACAAACTGGAGAGAGCAGAGATTGATGTGGACCAGGCAAAGCAGGATTCCGAACTTGCGCAGCTGCGGGCACAAGAAATGGAGCAGGGGATTGACGATGAAGCTAGCGTAATAGCCCAAACACAATTGGCAGTTGCTAAAGAGAGACATCAGAAGGCTGTTGATGAACTGAAGTTGGTCAAGGAGGAGATGAGATCAACACACGAAAAGCATACCGTTTTAGCTAGCGAAAGGGACATAGCAGCCAAAAGAGCCGAGCAAGCTATTTCTGCTGCAAAGGAGACTGAGAAGAGAGTTGAGGAACTCACTTTAGAACTTATCGCAATCAAAGAGTCTCTCGAGTCAGCCCATGCCGCGCATCATGAAGCAGAAGAACACAAGCTCGGGGCGGCTTTGGCAAAAGAGCAGGATTGCCTGGCTTGGGAGAAGGAACTGCAGCAAGCACAGGAGGAGTTGCAGCAACTCAACATGCAACTTGTATCAAAAACTGATGCAA AGTCCAAAATTGATGAAAATACGCACATGCTACAAATCCTCAGTAAGGAGCTGGCTGCCTATACAGAAAACAAAATGAGTGAAGAAGCTGGAGTGATCGAGGAGGATGGTTCTGATGAGGCTAAAGAAATTAGCAGGTCAATCAAGCGAGCCCTTGCTTCAACAAGAAAGGAGCTTGAAGGGGTTAGAGGAAATATTGAAAAGGCAAAAGACGAAACCAATTTAATAAGAGCTATTGCAGAATCAATTAAGTCAGAGGTGGATAAAGAGAAAGCTTCACTTGTTACATTGCAGCAGCGAGAAGGTATGGCATCCATAGCCGTCTCTTCTCTGGAAGCTGAGCTCAATAGGACAAAAGAAGAGATAGAAATGGTGTACATCAAGGAAGCGGAAACCCGTGAAAAAATGGCAGAGCTTCCAAAGATGCTGCAGCAAGCAGCTCAGGAAGCAGAAGACGCCAAGGTGGCACCTCATTCTGCACAGGAAGAACTTCGAAAGGCGAAAGAAGAAGCCGAGCAAACCAAGGCCGCTGCCGCGACTGCAGAGATCAGGTTACGCGCCGTTCTGAAAGAAATAGAGGCCTCTAAAGCATCCGAGAAGCTTGCCCTTGTGGCGGCTCAAGCATTGCAAGAGAGCGAGGAGACAAGTAGTGTTGAGGATTCCCCTAGAACCATTACACTTCCTATAAGTGAATATCATTCTCTGAGCAAGAGGGTCTACGAAGCCGAAGAGCTTGCGAATGAGAGGGTGGCCGCGGCATTGGCGCAAATAGAGCTAGCAAAAGAGTCTGAAACAAGGACCCTGGAGAGATTGCAACAAGAAACCAAAGAGATGCACAAGAAGAAGGATGCTCTTCAAATCGCACTGCAGAGGGCTGACAGGGCAAAGGAAGGAAAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTCGGAAAGCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAGGGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGTAGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAAATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAGGCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTGGTGTGGATACGTGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATATGTATGTCTGTTTCTGATGTTAGTCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTCAATTATGAAAACAGATTG ] [+] EMBL OSS1764A [ TGTTCCAGTTGAGAATCCTGATTCATCGCATGAAATGGAGAAGAAGTTAACCCACAATTTGACAGAAAATGGGCAGGCTCCTACAGGTCATACTGTACCTTCATTACCGGATACGGTCTCTAAATTGAAACCAGCTCAGGAATCTGATGATTCTTTGAAAGATAAGACAGACCTTCCTACTTCAACAAGTAAGACCGAAGTGAACAATATATCTGAAAATGGTTCGACCAACCAGAGCACTATGCTATCAGATGAATCGAGACCAAAGGAGGACAAGATGAATCATCACGGGGACCATTGCTGCCACCACAAACAAAAGGGCAGGAACAGATGCGAGNCTT AAGTCCATACAGNGGTCTCATTGAC ] [+] EMBL CB629426 [ AAACAAGATTCAGAAGCTTGTGAGATGGCCAAGTTACAAGTGGTTGAGGAGCTAGGGAGAACTAGGAGACTTGTAGAGGAGCTGAAACACAAACTGGAGAGAGCAGAGATTGATGTGGACCAGGCAAAGCAGGATTCCGAACTTGCGCAGCTGCGGGCACAAGAAATGGAGCAGGGGATTGACGATGAAGCTAGCGTAATAGCCCAAACACAATTGGCAGTTGCTAAAGAGAGACATCAGAAGGCTGTTGATGAACTGAAGTTGGTCAAGGAGGAGATGAGATCAACACACGAAAAGCATACCGTTTTAGCTAGCGAAAGGGACATAGCAGCCAAAAGAGCCGAGCAAGCTATTTCTGCTGCAAAGGAGACTGAGAAGAGAGTTGAGGAACTCACTTTAGAACTTATCGCAATCAAAGAGTCTCTCGAGTCAGCCCATGCCGCGCATCATGAAGCAGAAGAACACAAGCTCGGGGCGGCTTTGGCAAAAGAGCAGGATTGCCTGGCTTGGGAGAAGGAACTGCAGCAAGCACAGGAGGAGTTGCAGCAACTCAACATGCAACTTGTATCAAAAACTGATGCAA AGTCCAAAATTGATGAAAATACGCACATGCTACAAATCCTCAGTAAGGAGCTGGCTGCCTATACAGAAAACAAAATGAGTGAAGAAGCTGGAGTGATCGAGGAGGATGGTTCTGATGAGGCTAAAGAAATTAGCAGGTCAATCAAGCGAGCCCTTGCTTC ACAAGAAAGGAGCTTGAAGGGGTTAGAGGAAATATTGAA ] [+] EMBL CB676794 [ ATGCAACAGTCCTTAATTGATGAAAATACGCACATGCTACAAATCCTCAGTAAGGAGCTGGCTGCCTATACAGAAAACAAAATGAGTGAAGAAGCTGGAGTGATCGAGGAGGATGGTTCTGATGAGGCTAAAGAAATTAGCAGGTCAATCAAGCGAGCCCTTGCTTCAACAAGAAAGGAGCTTGAAGGGGTTAGAGGAAATATTGAAAAGGCAAAAGACGAAACCAATTTAATAAGAGCTATTGCAGAATCAATTAAGTCAGAGGTGGATAAAGAGAAAGCTTCACTTGTTACATTGCAGCAGCGAGAAGGTATGGCATCCATAGCCGTCTCTTCTCTGGAAGCTGAGCTCAATAGGACAAAAGAAGAGATAGAAATGGTGTACATCAAGGAAGCGGAAACCCGTGAAAAAATGGCAGAGCTTCCAAAGATGCTGCAGCAAGCAGCTCAGGAAGCAGAAGACGCCAAGGTGGCACCTCATTCTGCACAGGAAGAACTTCGAAAGGCGAAAGAAGAAGCCGAGCAAACCAAGGCCGCTGCCGCGACTGCAGAGATCAGGTTACGCGCCGTTCTGAAAGAAATAGAGGCCTCTAAAGCATCCGAGAAGCTTGCCCTTGTGGCGGCTCAAGCATTGCAAGAGAGCGAGGAGACAAGTAGTGTTGAGGATTCCCCTAGAACCATTACACTTCCTATAAGTGAATATCATTCTCTGAGCAAGAGGGTCTACGAAGCCGAAGAGCTTGCGAATGAGAGGGTGGCC ] [-] EMBL CB676795 [ AGCAAACCAAGGCCGCTGCCGCGACTGCAGAGATCAGGTTACGCGCCGTTCTGAAAGAAATAGAGGCCTCTAAAGCATCCGAGAAGCTTGCCCTTGTGGCGGCTCAAGCATTGCAAGAGAGCGAGGAGACAAGTAGTGTTGAGGATTCCCCTAGAACCATTACACTTCCTATAAGTGAATATCATTCTCTGAGCAAGAGGGTCTACGAAGCCGAAGAGCTTGCGAATGAGAGGGTGGCCGCGGCATTGGCGCAAATAGAGCTAGCAAAAGAGTCTGAAACAAGGACCCTGGAGAGATTGCAACAAGAAACCAAAGAGATGCACAAGAAGAAGGATGCTCTTCAAATCGCACTGCAGAGGGCTGACAGGGCAAAGGAAGGAAAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTCGGAAAGCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAGGGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGTAGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAAATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAGGCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAAaaaaagga ] [-] EMBL CB629427 [ GAGGATTCCCCTAGAACCATTACACTTCCTATAAGTGAATATCATTCTCTGAGCAAGAGGGTCTACGAAGCCGAAGAGCTTGCGAATGAGAGGGTGGCCGCGGCATTGGCGCAAATAGAGCTAGCAAAAGAGTCTGAAACAAGGACCCTGGAGAGATTGCAACAAGAAACCAAAGAGATGCACAAGAAGAAGGATGCTCTTCAAATCGCACTGCAGAGGGCTGACAGGGCAAAGGAAGGAAAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTCGGAAAGCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAGGGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGTAGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAAATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAGGCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTGGTGTGGATACGTGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATATGTATGTCTGTTTCTGATGTTAGTCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTCAATTATGAGAACAGATTGAAGTTTGAATACGTGATTCAAGT] [+] EMBL CB096799 [ aAGGGCAAAGGAAGGAAAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTCGGAAAGCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAGGGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGTAGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAAATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAGGCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTGGTGTGGATACGTGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATATGTATGTCTGTTTCTGATGTTAGTCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTCAATTATGAAAACAGATTGAAGTTT ] consensusID : consensus_11662#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 578 fasta sequence [AGAGGACGAGACAAGGGGGGGCTGACAGGGCAAAGGAAGGAAAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTTGGAAAGCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAGGGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGTAGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAAATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAGGCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTGGTGTGGATACGTGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATATGTATGTCTGTTTCTGATGTTAGTCATGAAAGCAAGAATTTTCTGTAAAAAAAAAAAAAAA] [-] EMBL CA759145 [AGAGGACGAGACAAGGGGGGGCTGACAGGGCAAAGGAAGGAAAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTTGGAAAGCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAGGGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGTAGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAAATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAGGCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTGGTGTGGATACGTGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATATGTATGTCTGTTTCTGATGTTAGTCATGAAAGCAAGAATTTTCTGTAAAAAAAAAAAAAAA] consensusID : consensus_11662#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 326 fasta sequence [ACCGTTANGGACCCTTATTAAAGGATTAAGTTCCCTGTACCAGGCCAATTATCCTTTACTGNTTACATTTGTTACCACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTNGGTGTGGATACGTNGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATNATNGTATGTCTGTTTCTGATGTTANGTCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTCAATTATGAAAACAGATTGAAGTTTGAAAAAAAA] [+] EMBL AU161623 [ACCGTTANGGACCCTTATTAAAGGATTAAGTTCCCTGTACCAGGCCAATTATCCTTTACTGNTTACATTTGTTACCACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAGTTTATTTTCCACAACCCTGTCACTTNGGTGTGGATACGTNGAGGGCATACTTTTGTATGATAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATNATNGTATGTCTGTTTCTGATGTTANGTCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTCAATTATGAAAACAGATTGAAGTTTGAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11662#0 AAAAAGAGAGAGTAGTTCTTGCAATCTTGCTTCGCCTGCAAGGAATCCTCTCCGGCTCTC 60 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CGCCCTGGAGGAAGTACAGTGATCAAATTAAGCTTTGGGGGTGGAGTAGACTAATCCTGC 120 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 TGAACAAAATAGCCCAGGAGGAAAAAAACGGTTTATTCTGCTACCATGGAAGTTCTTAAT 180 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 ACCAATGATCATGGGACTGCAAGAACACGGGATGGTGAAGAGACAGCATCTGTTCCAGTT 240 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GAGAATCCTGATTCATCGCATGAAATGGAGAAGAAGTTAACCCACAATTTGACAGAAAAT 300 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GGGCAGGCTCCTACAGGTCATACTGTACCTTCATTACCGGATACGGTCTCTAAATTGAAA 360 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CCAGCTCAGGAATCTGATGATTCTTTGAAAGATAAGACAGACCTTCCTACTTCAACAAGT 420 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 AAGACCGAAGTGAACAATATATCTGAAAATGGTTCGACCAACCAGAGCACTATGCTATCA 480 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GATGAATCGAGAACAAAAGAAGACAAGATGAATCATCACGAGAACATTGCTGCCACCACA 540 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 AACAAAAAGGCAGAAACAGATGCGAGACCTGAAAGTCCATACAGAGGTCTCATTGACACT 600 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GCTGCGCCATTTGAGTCAGTTAGAGAGGCTGTCACCAAGTTCGGAGGAATTGTTGATTGG 660 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 AAAGCATACAGATCTCAGACACTAGAGAGGCGCAGGGTCATGCAGCTTGAACTTGAAAAG 720 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GCTCAACAAGAGATTCCACAATTCAAACAAGATTCAGAAGCTTGTGAGATGGCCAAGTTA 780 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CAAGTGGTTGAGGAGCTAGGGAGAACTAGGAGACTTGTAGAGGAGCTGAAACACAAACTG 840 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GAGAGAGCAGAGATTGATGTGGACCAGGCAAAGCAGGATTCCGAACTTGCGCAGCTGCGG 900 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GCACAAGAAATGGAGCAGGGGATTGACGATGAAGCTAGCGTAATAGCCCAAACACAATTG 960 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GCAGTTGCTAAAGAGAGACATCAGAAGGCTGTTGATGAACTGAAGTTGGTCAAGGAGGAG 1020 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 ATGAGATCAACACACGAAAAGCATACCGTTTTAGCTAGCGAAAGGGACATAGCAGCCAAA 1080 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 AGAGCCGAGCAAGCTATTTCTGCTGCAAAGGAGACTGAGAAGAGAGTTGAGGAACTCACT 1140 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 TTAGAACTTATCGCAATCAAAGAGTCTCTCGAGTCAGCCCATGCCGCGCATCATGAAGCA 1200 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GAAGAACACAAGCTCGGGGCGGCTTTGGCAAAAGAGCAGGATTGCCTGGCTTGGGAGAAG 1260 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GAACTGCAGCAAGCACAGGAGGAGTTGCAGCAACTCAACATGCAACTTGTATCAAAAACT 1320 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GATGCAAAGTCCAAAATTGATGAAAATACGCACATGCTACAAATCCTCAGTAAGGAGCTG 1380 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GCTGCCTATACAGAAAACAAAATGAGTGAAGAAGCTGGAGTGATCGAGGAGGATGGTTCT 1440 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GATGAGGCTAAAGAAATTAGCAGGTCAATCAAGCGAGCCCTTGCTTCAACAAGAAAGGAG 1500 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CTTGAAGGGGTTAGAGGAAATATTGAAAAGGCAAAAGACGAAACCAATTTAATAAGAGCT 1560 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 ATTGCAGAATCAATTAAGTCAGAGGTGGATAAAGAGAAAGCTTCACTTGTTACATTGCAG 1620 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CAGCGAGAAGGTATGGCATCCATAGCCGTCTCTTCTCTGGAAGCTGAGCTCAATAGGACA 1680 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 AAAGAAGAGATAGAAATGGTGTACATCAAGGAAGCGGAAACCCGTGAAAAAATGGCAGAG 1740 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CTTCCAAAGATGCTGCAGCAAGCAGCTCAGGAAGCAGAAGACGCCAAGGTGGCACCTCAT 1800 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 TCTGCACAGGAAGAACTTCGAAAGGCGAAAGAAGAAGCCGAGCAAACCAAGGCCGCTGCC 1860 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GCGACTGCAGAGATCAGGTTACGCGCCGTTCTGAAAGAAATAGAGGCCTCTAAAGCATCC 1920 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GAGAAGCTTGCCCTTGTGGCGGCTCAAGCATTGCAAGAGAGCGAGGAGACAAGTAGTGTT 1980 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GAGGATTCCCCTAGAACCATTACACTTCCTATAAGTGAATATCATTCTCTGAGCAAGAGG 2040 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GTCTACGAAGCCGAAGAGCTTGCGAATGAGAGGGTGGCCGCGGCATTGGCGCAAATAGAG 2100 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CTAGCAAAAGAGTCTGAAACAAGGACCCTGGAGAGATTGCAACAAGAAACCAAAGAGATG 2160 consensus_11662#1 ------------------------------------------------------------ consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 CACAAGAAGAAGGATGCTCTTCAAATCGCACTGCAGAGGGCTGACAGGGCAAAGGAAGGA 2220 consensus_11662#1 -------------------AGAGGACGAGACAAGGGGGGGCTGACAGGGCAAAGGAAGGA 41 consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 AAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTCGGAAA 2280 consensus_11662#1 AAGCTTGGTGCTGAGCAGGAACTGAGGAAATGGAGAGCAGAGCTTGAGCAGCGTTGGAAA 101 consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAG 2340 consensus_11662#1 GCCGCAAAACATGTTGCTAATCCTTGGACTGCTCCACCTATAAGATCACCTGAACAGAAG 161 consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 GGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGT 2400 consensus_11662#1 GGCTCTTACAAGGAAGACGATGCAGTTCTTACTGAACCAAATTCACCCATGTCAAATAGT 221 consensus_11662#2 ------------------------------------------------------------ consensus_11662#0 AGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAA 2460 consensus_11662#1 AGCACGGATGACTTTGTTGTGGACCAGAAGTTGAGGAAAAAGAAAACATTCTTCCCACAA 281 consensus_11662#2 -----------------------------------------------------------A 1 * consensus_11662#0 ATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAG 2520 consensus_11662#1 ATGTCAAGCATTTTGTCTAGAAAGGCACAGACGTAGACCTATAAGATTAGTCCTGTACAG 341 consensus_11662#2 CCGTTANGGACCCTTATTAAAGGATTAAGTTCCCTGTACCAGGCCAATTATCCTTTACTG 61 ** * * * * ** * * * * * * * * **** *** * consensus_11662#0 GCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAG 2580 consensus_11662#1 GCATATCTTACTGTACATTGTACACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAG 401 consensus_11662#2 N------TTAC-ATTTGTTAC-CACTGCAAAAATGTAAATGGTGTGTTTGAGTACATAAG 113 **** * ** ************************************** consensus_11662#0 TTTATTTTCCACAACCCTGTCACTTGG-TGTGGATACGTG-AGGGCATACTTTTGTATGA 2638 consensus_11662#1 TTTATTTTCCACAACCCTGTCACTTGG-TGTGGATACGTG-AGGGCATACTTTTGTATGA 459 consensus_11662#2 TTTATTTTCCACAACCCTGTCACTTNGGTGTGGATACGTNGAGGGCATACTTTTGTATGA 173 ************************* * *********** ******************* consensus_11662#0 TAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATA-- 2696 consensus_11662#1 TAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATA-- 517 consensus_11662#2 TAATTTTGGATATTTTTTTATACTATAGTTCCTTCGTTTCCAAAACTCAGAGGCAATNAT 233 ********************************************************* consensus_11662#0 TGTATGTCTGTTTCTGATGTTAG-TCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTC 2755 consensus_11662#1 TGTATGTCTGTTTCTGATGTTAG-TCATGAAAGCAAGAATTTTCTGTAAAAAAAAAAAAA 576 consensus_11662#2 NGTATGTCTGTTTCTGATGTTANGTCATGAAAGCAAGAATTTTCTGTAACAAAAATTGTC 293 ********************* ************************* ***** consensus_11662#0 AATTATGAAAACAGATTGAAGTTTGAATACGTGATTCAAGT 2796 consensus_11662#1 AA--------------------------------------- 578 consensus_11662#2 AATTATGAAAACAGATTGAAGTTTGAAAAAAAA-------- 326 ** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||