cluster # 11668

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Oryza sativa
cluster # 11668 cluster # 11668 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11668#0 length = 1110 sequences # 9
consensusID : consensus_11668#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1110
fasta sequence
                              [TCGGATCCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG-CTACGCCGGCGGGT-CCAAGG-CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGA-TTCAGTACAAGAAACTTCTAGA-GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT-CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT-CTTAGC-AAAGA-AAAAGAACAAGCTAAGGATC-GCCGCAGTGTCATTACCACAC-AGATCCAACC-AATAGGTGCATTTTAT-CCGGCTGAACCGGAACATC-AGAAATTTGAGCT-GAAGC-GCAAGCCGTT-T-CTC-CTGC-AACTGATT-GGGAAC-CTGCC-CGAGGAGGAGCTCCTGACCTC-AACACT-AGCTGCAAAGTTGAAT-GCATACGCTGCT-GAGCTCT-GCTCCCC-AAATACCC-AGAAC-AGAAT-AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT-CCTCCTCTGCTCA-TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTACAGAACAGGTGCCGAAATTGTATATTGTTACTCTGGCTCTTTTATGTGTAAAAATATATGATGTGGATTCATTACATTCTTAATCAAAAAC]

[+] EMBL AU161223             [TCGGATCCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG CTACGCC GCGGGT CCAAAG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAA GTTGAATATGATCCCCGGTTGA TTCA TACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU161216             [TCGGATCCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAG CGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG CTAC NCGGCGGGT CCAAGG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGNCGAGTGCGTCAAGGTTGAATATAATNCCCGGTTGATTTCAGTACAAGAAACTTCTAGAGGGTCTTCTTGGAAAGTna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK069328             [             CGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG CTACGCCGGCGGGT CCAAGG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGA TTCAGTACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTACAGAACAGGTGCCGAAATTGTATATTGTTACTCTGGCTCTTTTATGTGTAAAAATATATGATGTGGATTCATTACATTCTTAATCAAAAAC]
[+] EMBL C97580               [                                                                                                                                                                                                                                               GGCTTGATCCGCACNTCC  CGGTGTACGCCGGCGGTTCCCAAGGCCCCGCCCTGAGTACCGCAACNTCGGCGACCACGCCGAGTGCNTCAAGGTTGAATATGATCCCCGGTTGA TTCAGTACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAAaa                                                                                                                                             ]
[+] EMBL CB000430             [                                                                                                                                                                                                                                                 CGCGATCCTCACCTCCGGCGG CTACGCCGGCGGGG CCAAGG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGA TTCAGTACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGTCCCTCCTCTGCTCATTTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCT                                                                                                               ]
[+] EMBL AU161224             [                                                                                                                                                                                                                                                                                                                                                                             GAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAAaa                                                                                                                                             ]
[+] EMBL BI797270             [                                                                                                                                                                                                                                                                                                                                                                                                  GGGCAATTCATGATCCACGAGA GTCTTTGGGCAAGGACCAGATGTGGGCAACCAATACAGATCCATGCATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGTGCTTAGCAAAAGATAAAAGAACAAGCTAAGGATCAGCCGCAGTGTCATTACCACACAAGATCCAACCAAATAGGTGCATTTTATGCCGGCTGAACCGGAACATCAAGAAATTTGAGCTGGAAGCAGCAAGCCGTTGTGCTCACTGCAAACTGATTGGGGAACACTGCCACGAGGAGGAGCTCCTGACCTCAAACACTGAGCTGCCAAGTTGAATGGCATACGCTGCTGGAGCTCTGGCTCCCCAAAATACCCAAGAACAAGAATGAAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGGGCATGATTTTGCCGCAAAaaaaaaa                                                                                                                                                                                                                                                               ]
[+] EMBL BE530943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTG                                                                                                                           ]
[+] EMBL CB684597             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CC AATCTTTGAATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTACAGAACAGGTGCCGAAATT                                                                        ]




>consensus_11668#0
TCGGATCCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTG
TGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCG
GGGGTAACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGA
CGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCG
GCGTGATCCGCACCTCCGTCGGCTACGCCGGCGGGTCCAAGGCCCGCCCTGAGTACCGCA
ACCTCGGCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGATTCAGTACA
AGAAACTTCTAGAGGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGAC
CAGATGTTGGCAACCAATACAGATCCATCATCTTCACAAATGGATCCGTGGAAGCTAGAT
TGGCTGGTCTTAGCAAAGAAAAAGAACAAGCTAAGGATCGCCGCAGTGTCATTACCACAC
AGATCCAACCAATAGGTGCATTTTATCCGGCTGAACCGGAACATCAGAAATTTGAGCTGA
AGCGCAAGCCGTTTCTCCTGCAACTGATTGGGAACCTGCCCGAGGAGGAGCTCCTGACCT
CAACACTAGCTGCAAAGTTGAATGCATACGCTGCTGAGCTCTGCTCCCCAAATACCCAGA
ACAGAATAAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACA
TTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATT
TTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTA
ATTAGCGTTCATGTCCTCCTCTGCTCATTTTGAGATCTCTCTAATAGAATCTGCATGTAT
ATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTAC
AGAACAGGTGCCGAAATTGTATATTGTTACTCTGGCTCTTTTATGTGTAAAAATATATGA
TGTGGATTCATTACATTCTTAATCAAAAAC
clustalw multiple alignements is not computed in this case