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Oryza sativa
cluster # 11670 cluster # 11670       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11670#0 length = 1342 sequences # 8  
consensus_11670#1 length = 823 sequences # 1  

consensusID : consensus_11670#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1342
fasta sequence
                              [GCTAAAAAATTTTCGAGCCAAAAACTTTACCAAAATCCTCCGAAATTCCTGCGTCTTTCAGCTCGGATCAGGCATTCAGGCCCTTCTCCCCGCCAGGATCGGTGGATGGAGATCATCAACGGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTGGTGCGGATTAC-AGAAATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATG-AAG-AGGAGA-CTATTAGC-TTAGATCT-CAAGCCA-TC-AGATGCCATCAACA-TTGCTTTCCGGTGTAAGGTTCCTATACA-AGTGAATAGGCGTATAGCGTATAACAATGGATTGAAA-GTTGTACAACCAACACCATCTGAGAGCTATGTAAGCTCAGACCAATTCCAATGCACAAGACTTGACAGGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGGTCGCTGCTGTTGAGGAACGCTAC-AAGATGCTGCTCAATA-CAGAGATCAGCTTTTCATGTTCCGGGC-AAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGT-CCGCCTGAAGTGCATAAAGCCAAACATCAAGAAGA-ACTTTGTAAATACTTACAGAAGAACCTATACATAGATACATATACATACTAGAACATTATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTTGTAAAATTGACTCAAAAGGTGCCCATGTTTGTCACTCACGATTGATTTTAGCAAAACGTTAAGCAAATT-C-TTACNCGAAAAAAAA]

[+] EMBL AK065414             [GCTAAAAAATTTTCGAGCCAAAAACTTTACCAAAATCCTCCGAAATTCCTGCGTCTTTCAGCTCGGATCAGGCATTCAGGCCCTTCTCCCCGCCAGGATCGGTGGATGGAGATCATCAACGGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTGGTGCGGATTAC AGAAATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATG AAG AGGAGA CTATTAGC TTAGATCT CAAGCCA TC AGATGCCATCAACA TTGCTTTCCGGTGTAAGGTTCCTATACA AGTGAATAGGCGTATAGCGTATAACAATGGATTGAAA GTTGTACAACCAACACCATCTGAGAGCTATGTAAGCTCAGACCAATTCCAATACACAAGACTTGACAGGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGGTCGCTGCTGTTGAGGAACGCTACAAAGATGCTGCTCAATA CAGAGATCAGCTTTTCATGTTCCGGGCAAAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGTCCCGCCTGAAGTGCATAAAGCCAAACATCAAGAAGA ACTTTGTAAATACTTACAGAAGAACCTATACATAGATACATATACATACTAGAACATGATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTAGTAAAATTGACTCAAAAGGTGCCCATGTTTGTCACTCACGATTGATTTTAGCAAAACGTTAAGCAAATT                  ]
[+] EMBL CB653044             [               AGCCAACAACTTTACCAAAATCCTCCGAAATTCCTGCGTCTTTCAGCTCGGATCAGGCATTCAGGCCCTTCTCCCCGCCAGGATCGGTGGATGGAGATCATCAACGGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTGGTGCGGATTAC AGAAATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATG AAG AGGAGA CTATTAGC TTAGATCT CAAGCCA TC AGATGCCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF325540             [                    AAAACTTTACCAAAATCCTCCGAAATTCCTGCGTCTTTCAGCTCGGATCAGGCATTCAGGCCCTTCTCCCCGCCAGGATCGGTGGATGGAGATCATCAACGGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF326331             [                                                                                                                                                                                                                                                                                                                            TTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTGGTGCGGATTAC AGAAATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATG AAG AGGAGA CTATTAGC TTAGATCT CAAGCCA TC AGATGCCATCAACA TTGCTTTCCGGTGGTAGGTTCCTATACA AGTGAATAGGCGTATAGCGTATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BQ908890             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATAT CGGTACGTTTGGTGCGGATTACAAGAAATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATG AAG AGGAGA CTATTAGC TTAGATCT CAAGCCA TC AGATGCCATCAACA TTGCTTTCCGGTGTAAGGTTCCTATACA AGTGAATAGGCGTATAGCGTATAACAATGGATTGAAA GTTGTACAACC ACACCATCTGAGAGCTATGTAAGCTCAGACC ATTCC ATGCAC AGACTTGACAGGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGC ATATGCTGGTCGCTGCTGTTGAGGAACGCTAC AAGATGCTGCTCAATACCAGAGATCAGCTTTTCATGTTCCGGGC AAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGT CCGCCTGAAGTGCATAAAGCC AACATCAAGAAGA ACTTTGTAAATACTTACAGAAGAACCTATACATAGATACATATACATACTAGAACATTATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTTGTAAAATTGACTC AAAGGTGCCCATGTTTGTCACTCACGATTGATTTTA CCAAACGTTAA CAAATG C TTACNCGAAAAA   ]
[+] EMBL CA765585             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             aaggggGGTCCATGATGCATACTCTTCTCGATTGTATCTTGCTAAGATTGGCAATG AAG AGGAGA CTATTAGT TTAGATCT CAAGCCA TC AGATGCCATCAACA TTGCTTTCCGGTGTAAGGTTCCTATACA AGTGAATAGGCGTATAGCGTATAACAATGGATTGAAA GTTGTACAACCAACACCATCTGAGAGCTATGTAAGCTCAGACCAATTCCAATGCACAAGACTTGACAGGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGGTCGCTGCTGTTGAGGAACGCTACAAAGATGCTGCTCAATA CAGAGATCAGCTTTTCATGTTCCGGGCAAAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGT CCGCCTGAAGTGCATAAAGCCAAACATCAAGAAGA ACTTTGTAAATACTTACAGAAGAACCTATACATAGATACATATACATACTAGAACATTATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTTGTAAAATTGACTCAAAAGGTGCCCATGTTTGTCACTCACGATTGATTTTAGCAAAACGNTAAGC                       ]
[+] EMBL BM038286             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccaCATTGAAAGNAGGAAACCTATTACCTTTAGATCTCCAACCCATTCAAGATCCCATCCACACATGCTTTCC GTGTAAGGTTCCTATACACAGTGAATAGGCGTATAGCGTATAAC ATGGATTGAAA GTTGTACAACCAACACCATCTGAGAGCTATGTAAGCTCAGACCCATTCCCATGCACAAGACTTGACAGGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGGTCGCTGCTGTTGAGGAACGCTAC AAGATGCTGCTCAATA CAGAGATCAGCTTTTCATGTTCCGGGC AAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGT CCGCCTGAAGTGCATAAAGCCCAACATCAAGAAGACACTTTGTCCATACTTACAGAAGAACCTATACATAGATACATATACATACTAGAACATTATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTTGTAAAATTGACTCAAAAGGTGCCCATGTTTGTCACTCACGATTGATTTTAGC AAACNCCNCCCCAATTGCTTTACACGAAAAAAAA]
[+] EMBL BI813836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAA GTTCCTATACA AGTGAATAGGCGTATAGCGTATAAC ATGGATTGAAAGGTTGTAC ACCGACACCATCTGAGAGCTATGTAAGCTCAGACC ATTCC ATGCACAAGACTTGACAGGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGGTCGCTGCTGTTGAGGAACGCTAC AAGATGCTGCTCAATA CAGAGATCAGCTTTTCATGTTCC GGC AAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGT CCGCCTGAAGTGCATAAAGCC AACATCAAGAAGA ACTTTGTAAATACTTACAGAAGAACCTATACATAGATACATATACATACTAGAACATTATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTTGTAAAATTGACTC AAAGGTGCCCATGTTTGTCACTCACGATTGATTTTA C AAACGTTAA CAAAa                   ]


>consensus_11670#0 GCTAAAAAATTTTCGAGCCAAAAACTTTACCAAAATCCTCCGAAATTCCTGCGTCTTTCA GCTCGGATCAGGCATTCAGGCCCTTCTCCCCGCCAGGATCGGTGGATGGAGATCATCAAC GGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAG ATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGA GACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGC GGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCT GCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTT GAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGA TGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATT GTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCA AGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAAT GTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTGGTGCGGATTACAGAA ATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATGAAGAGGAG ACTATTAGCTTAGATCTCAAGCCATCAGATGCCATCAACATTGCTTTCCGGTGTAAGGTT CCTATACAAGTGAATAGGCGTATAGCGTATAACAATGGATTGAAAGTTGTACAACCAACA CCATCTGAGAGCTATGTAAGCTCAGACCAATTCCAATGCACAAGACTTGACAGGCCTGAC GATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGGTCGCTGCT GTTGAGGAACGCTACAAGATGCTGCTCAATACAGAGATCAGCTTTTCATGTTCCGGGCAA GAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGTCCGCCTGAAGT GCATAAAGCCAAACATCAAGAAGAACTTTGTAAATACTTACAGAAGAACCTATACATAGA TACATATACATACTAGAACATTATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTTGTA AAATTGACTCAAAAGGTGCCCATGTTTGTCACTCACGATTGATTTTAGCAAAACGTTAAG CAAATTCTTACNCGAAAAAAAA



consensusID : consensus_11670#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 823
fasta sequence
                              [TATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTGAGTTTAAGATGAGATCTTATAAGCAGACTTTCTTTTGCAACTTTCGTGTGGCTTCATGGTTTAGGTTTTCTGTTTAGTGTTTCATGGGTGTGCTTATGTGTGTTACTATTTTAGTTTTATTACTTAATGTATGCTGGTTATCATGCACTCGGACAATACATACATCTTTTCTAAAGTGTCCTAGTGGAAAGCTGTTTTCCAGAGTTCACGGTCTGCAGATCTGTTCTCTTAAATGTCATATAATATGTTCATTTATCAGTTA]

[+] EMBL CB659127             [TATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTGAGTTTAAGATGAGATCTTATAAGCAGACTTTCTTTTGCAACTTTCGTGTGGCTTCATGGTTTAGGTTTTCTGTTTAGTGTTTCATGGGTGTGCTTATGTGTGTTACTATTTTAGTTTTATTACTTAATGTATGCTGGTTATCATGCACTCGGACAATACATACATCTTTTCTAAAGTGTCCTAGTGGAAAGCTGTTTTCCAGAGTTCACGGTCTGCAGATCTGTTCTCTTAAATGTCATATAATATGTTCATTTATCAGTTA]


>consensus_11670#1 TATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAGATCAGCGGGCAGCTGCTT AGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGAGACCACTACCGGGCGGCG CGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTT TGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCTGCCGCGGATTACGACGCC AGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTTGAGCTCAGAAGTGTATCT GATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGATGTGTCCAAAACAACCCG CGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATTGTTCTGAAGATGGAAGAT GGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCAAGTATTATGTTGCTGGCT GCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAATGTGGTAAAGGAGATGACC GAAAGGATGGGATATGCGGTGAGTTTAAGATGAGATCTTATAAGCAGACTTTCTTTTGCA ACTTTCGTGTGGCTTCATGGTTTAGGTTTTCTGTTTAGTGTTTCATGGGTGTGCTTATGT GTGTTACTATTTTAGTTTTATTACTTAATGTATGCTGGTTATCATGCACTCGGACAATAC ATACATCTTTTCTAAAGTGTCCTAGTGGAAAGCTGTTTTCCAGAGTTCACGGTCTGCAGA TCTGTTCTCTTAAATGTCATATAATATGTTCATTTATCAGTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11670#0      GCTAAAAAATTTTCGAGCCAAAAACTTTACCAAAATCCTCCGAAATTCCTGCGTCTTTCA 60
consensus_11670#1      ------------------------------------------------------------
                                                                                   

consensus_11670#0      GCTCGGATCAGGCATTCAGGCCCTTCTCCCCGCCAGGATCGGTGGATGGAGATCATCAAC 120
consensus_11670#1      ------------------------------------------------------------
                                                                                   

consensus_11670#0      GGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAG 180
consensus_11670#1      ------------------TATGCTGCTCCGGCGACCGGCGCCCTGACCTCCGACGCGAAG 42
                                         ******************************************

consensus_11670#0      ATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGA 240
consensus_11670#1      ATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGTTGCAGGGA 102
                       ************************************************************

consensus_11670#0      GACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGC 300
consensus_11670#1      GACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATGCGCGAAGC 162
                       ************************************************************

consensus_11670#0      GGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCT 360
consensus_11670#1      GGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACGGCGCCGCT 222
                       ************************************************************

consensus_11670#0      GCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTT 420
consensus_11670#1      GCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGGAGGCTGTT 282
                       ************************************************************

consensus_11670#0      GAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGA 480
consensus_11670#1      GAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAAACCTTAGA 342
                       ************************************************************

consensus_11670#0      TGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATT 540
consensus_11670#1      TGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACCATGCTATT 402
                       ************************************************************

consensus_11670#0      GTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCA 600
consensus_11670#1      GTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGGAAACACCA 462
                       ************************************************************

consensus_11670#0      AGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAAT 660
consensus_11670#1      AGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTATTTATAAT 522
                       ************************************************************

consensus_11670#0      GTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTGGTGCG-GATTACAGA 719
consensus_11670#1      GTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTGAGTTTAAGATGAGATCTTATA 582
                       **************************************  ****     * ***   * *

consensus_11670#0      AATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATGAAGAGGA 779
consensus_11670#1      AGCAGACTTTCTTTTGCAACTTTCGTGTGGCTTCATGGTTTAGGTTTTCTGTTTAGTG-- 640
                       *   * *  *  *    *   ***  *    *   * * * ** **  *  *  ** *  

consensus_11670#0      GACTATTAGCTTAGATCTCAAGCCATCAGATGCCATCAACATTGCTTTCCGGTGTAAGGT 839
consensus_11670#1      -TTTCATGGGTGTGCTTATGTGTGTTACTATTTTAGTTTTATTACTTAATGTATGCTGGT 699
                          *  * * *  * *     *   *   **   *     *** ***   *      ***

consensus_11670#0      TCCTATACAAGTGAATAG-GCGTATAGCGTATAACAATGGATTGAAAGTTGTACAACCAA 898
consensus_11670#1      TATCATGCACTCGGACAATACATACATCTTTT--CTAAAGTGTCCTAGTGGAA-----AG 752
                       *   ** **   * * *   * ** * * * *  * *  *  *   *** * *     * 

consensus_11670#0      CACCATCTGAGAGCTATGTAAGCTCAGACCAATTCCAATGCACAAGACTTGACAGGCCTG 958
consensus_11670#1      CTGTTTTCCAGAGTTCACGGTCTGCAGATCTGTTCTCTTAAATGTCATATAATATGTTCA 812
                       *    *   **** *         **** *  ***   *  *    *  * * * *    

consensus_11670#0      ACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGGTCGCTG 1018
consensus_11670#1      TTTATCAGTTA------------------------------------------------- 823
                          ****                                                     

consensus_11670#0      CTGTTGAGGAACGCTACAAGATGCTGCTCAATACAGAGATCAGCTTTTCATGTTCCGGGC 1078
consensus_11670#1      ------------------------------------------------------------
                                                                                   

consensus_11670#0      AAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGTCCGCCTGAA 1138
consensus_11670#1      ------------------------------------------------------------
                                                                                   

consensus_11670#0      GTGCATAAAGCCAAACATCAAGAAGAACTTTGTAAATACTTACAGAAGAACCTATACATA 1198
consensus_11670#1      ------------------------------------------------------------
                                                                                   

consensus_11670#0      GATACATATACATACTAGAACATTATTTTGGGTGCTTTCAATTCGTGGTGGCGTTGGTTG 1258
consensus_11670#1      ------------------------------------------------------------
                                                                                   

consensus_11670#0      TAAAATTGACTCAAAAGGTGCCCATGTTTGTCACTCACGATTGATTTTAGCAAAACGTTA 1318
consensus_11670#1      ------------------------------------------------------------
                                                                                   

consensus_11670#0      AGCAAATTCTTACNCGAAAAAAAA 1342
consensus_11670#1      ------------------------
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)