cluster # 11692

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Oryza sativa
cluster # 11692 cluster # 11692 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11692#0 length = 1400 sequences # 9
consensusID : consensus_11692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1400
fasta sequence
                              [NNTNTNTNACCCTTTTCTAGAGGGNCNAAAGGGNACCGGGCCCCCCCNCGAGGNCGACCCACGCAGCATGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG-GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCACCGTCTCCGGCGTCTTCGCCGCC-GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGTCCATGATCCTCCACCCGACGCTCGTCGTCCCCTTCCTCGGCGTCGGCGAGTGGCTCCGCCGCGACCGCGAGCCGCCGGAGGAGGACCCGTACTGCATCTTCAAGCAGGCGCACGGCCGGAGCCTGTGGGAGCTGGCCGGCCGCGACGCGGCGTTCGACGCGCTCATCAACGACGGGATGGTCTCGGACAGCCGCGTCATCATGGACTACGTCGTGAGGGAGCACGGCGAGGTGTTCCGGGGGATCGCCTCCCTGGTCGACCTCGCCGGCGGGCTCGGCGCGGCGGCGCAGGTCATCTCGAAGGCGTTCCCGGAGGTGAGGTGCAGCGTGATGGACCTCGGGCACGTCGTCGCCAAGGCTCCCGCCGGCACCGACGTCGAGTACATCGCCGGCGACATGTTTGAGAGTGTGCCACCGGCAGACGCTGTCTTCCTCAAGTGGGTTCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAAAAATAGGAAAACGACACGGGTGGACT]

[-] EMBL AU222582             [NNTNTNTNACCCTTTTCTAGAGGGNCNAAAGGGNACCGGGCCCCCCCNCGAGGNCGACCCACGCGTCCGGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACGNTTTTTTNCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK068905             [                                                              ggAGCATGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCACCGTCTCCGGCGTCTTCGCCGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGTCCATGATCCTCCACCCGACGCTCGTCGTCCCCTTCCTCGGCGTCGGCGAGTGGCTCCGCCGCGACCGCGAGCCGCCGGAGGAGGACCCGTACTGCATCTTCAAGCAGGCGCACGGCCGGAGCCTGTGGGAGCTGGCCGGCCGCGACGCGGCGTTCGACGCGCTCATCAACGACGGGATGGTCTCGGACAGCCGCGTCATCATGGACTACGTCGTGAGGGAGCACGGCGAGGTGTTCCGGGGGATCGCCTCCCTGGTCGACCTCGCCGGCGGGCTCGGCGCGGCGGCGCAGGTCATCTCGAAGGCGTTCCCGGAGGTGAGGTGCAGCGTGATGGACCTCGGGCACGTCGTCGCCAAGGCTCCCGCCGGCACCGACGTCGAGTACATCGCCGGCGACATGTTTGAGAGTGTGCCACCGGCAGACGCTGTCTTCCTCAAGTGGGTTCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAACTATAGGAAAACGACACGGGTGGACT]
[+] EMBL C73022               [                                                                AGCATGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTCACCGTCTCCGGCGTCTTCGCCGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGTCCATGATCCTCCACCCGACGCTCGTCGTCCCCTTCCTCGGCGTCGGCGAGTGGCTCCGCCGCGACCGCGAGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C71958               [                                                                       AGCTCACTGAGAGTAAGTNCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACG GCGGCGCCGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGCGCTNACCGTCTCCGGCGTCTTCGNCGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTGAGCCCGTTTACGAGCTCANGCCGTCGTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C72759               [                                                                             CTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCA NCCACCTCCACG GCGGCG CGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCATGCGCGAGCTCACCGTCTCCGGCGTCTT NAAGCCNGCCGTCAAGCNCGGAGACGGTGGTGGTGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAA CTGTNCGGCATCATGTCCATGATCCTCCAACCGANGCTCGTGGT CCCTTCNTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C73015               [                                                                              TGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGACGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTCGGCGCTAGACCTCCGCATCGCCGACGCAG CCACCTCCACG GCGGCG CGCCACCTTGGCCGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGNCGCCTCATGCGCGNGCTCACCGTCTCCGGCGTCTTCG CGCC GCCGTCAAGCCCGGAGACGGTGGTGGTGGTNAGNCCGTGTACGAGCTCACGCCGTCGTCGCGGNTCCTCGTCGGCTCCTCGAACCTGTCCGGCATCATGT NATGATCCTCagcga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU101176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tcCGGGCACGTCGTCGCCAA GCTCCCGCCGGCACCGACGTCGAGTACATCGCCGGCGACATGTTTGAGAGTGTGCCACCGGCAGACGCTGTCTTCCTCAAGTGGGTTCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATAaaaaaa                                        ]
[+] EMBL AU165365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCTTCCTCAAGTGGGTNCTACATGACTGGGGCGATGACGATTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCNTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTNCCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAAAAAa                      ]
[+] EMBL AU182423             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCCTAGAGACAAAGGAGGAAAGGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGTACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGAGTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGGTTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAATCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGTTGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTGTGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAAAA                        ]




>consensus_11692#0
NNTNTNTNACCCTTTTCTAGAGGGNCNAAAGGGNACCGGGCCCCCCCNCGAGGNCGACCC
ACGCAGCATGGAGCTCACTGAGAGTAAGTGCGATGGCGGGCAAGAAGTTAGCTTGCTGGA
CGCTCAGCTCGAGCTCTACTGGAACACCTTCGCCGTCATCAAGTCCATGGCTCTCAAGTC
GGCGCTAGACCTCCGCATCGCCGACGCAGTCCACCTCCACGGCGGCGCCGCCACCTTGGC
CGAGATAGCCAGCGAGGTGGCCCTCCACCCGTCCAAGATCCCCTGCCTCCGCCGCCTCAT
GCGCGCGCTCACCGTCTCCGGCGTCTTCGCCGCCGCCGTCAAGCCCGGAGACGGTGGTGG
TGGTGAGCCCGTGTACGAGCTCACGCCGTCGTCGCGGCTCCTCGTCGGCTCCTCGAACCT
GTCCGGCATCATGTCCATGATCCTCCACCCGACGCTCGTCGTCCCCTTCCTCGGCGTCGG
CGAGTGGCTCCGCCGCGACCGCGAGCCGCCGGAGGAGGACCCGTACTGCATCTTCAAGCA
GGCGCACGGCCGGAGCCTGTGGGAGCTGGCCGGCCGCGACGCGGCGTTCGACGCGCTCAT
CAACGACGGGATGGTCTCGGACAGCCGCGTCATCATGGACTACGTCGTGAGGGAGCACGG
CGAGGTGTTCCGGGGGATCGCCTCCCTGGTCGACCTCGCCGGCGGGCTCGGCGCGGCGGC
GCAGGTCATCTCGAAGGCGTTCCCGGAGGTGAGGTGCAGCGTGATGGACCTCGGGCACGT
CGTCGCCAAGGCTCCCGCCGGCACCGACGTCGAGTACATCGCCGGCGACATGTTTGAGAG
TGTGCCACCGGCAGACGCTGTCTTCCTCAAGTGGGTTCTACATGACTGGGGCGATGACGA
TTGCATCAAGATATTAAAGAACTGCAAGAAAGCTATCCCTCCTAGAGACAAAGGAGGAAA
GGTGATAATCATGGATATAGTGGTCGGAGCAGGACCGTCTGACCAGAAGCACAGGGAGGT
ACAAGCGTTGTTCGATATGTACATCATGTTCGTCAATGGCATTGAAAGAGATGAGCAAGA
GTGGAAGAAGGTTTTTATGGGGGCTGGATTTAGTGGGTACAAGATTATGCCAGTCCTGGG
TTTTAGGTCAATGATCGAGGTGTACCCTTGAAGGTGACACCGGTGATTGTGATTGTGAAA
TCAATGATTGGTGATTAGTTGCTCGGTGGAGATGTGGAGTGTAGCATGTTTGTTTGTTGT
TGTGAGATTCACAATAGTGATGATTGTGTGGGTGTGTTTTCTTGGTTGTATGTGAAATTG
TGATTAGAATTCAGACCAATAATAAATTGTGATACTATGTTGTATCGATGTAAAAAATAG
GAAAACGACACGGGTGGACT
clustalw multiple alignements is not computed in this case