cluster # 11694

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Oryza sativa
cluster # 11694 cluster # 11694 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11694#0 length = 1247 sequences # 9
consensusID : consensus_11694#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1247
fasta sequence
                              [CGTGCCGTCTCGTACTCTCTCGTGCAGGCTAACGTTGGAATCTTGGGAGGGGAGATGGCGGTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAGCCTCGCCGGCTTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCTTCCGCCCGCGGCGGGCCCGTCGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCCGCAGACGGATGAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAGGATGCTGGAAATCCAACTTTTCCCAATAAAGATCTC-AGCAGAAGGATAGCACTGGCCTCCACTATTGGAGCTG-TGGGCCTCTTTGCATATCAAAGACTCGACTTTGGAGGCGTTTCTCTCAAAGATCTTGCAGCAAATGCTACACCGTATGAAGAGGCTCTCTCAAATGGCAAGCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT-GT-CATGCTAAA-TGTT-GACAA-CACAAAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGCTAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCGATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGCTGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCATTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAATGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCACTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACT-AAAATTTGTGTGATATATATATGCTTCTGCTACTCTTGGGGAAAGCTGCACAACCTA]

[+] EMBL AK073052             [CGTGCCGTCTCGTACTCTCTCGTGCAGGCTAACGTTGGAATCTTGGGAGGGGAGATGGCGGTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAGCCTCGCCGGCTTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCTTCCGCCCGCGGCGGGCCCGTCGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCCGCAGACGGATGAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAGGATGCTGGAAATCCAACCTTTCCCAATAAAGATCTC AGCAGAAGGATAGCACTGGCCTCCACTATTGGAGCTG TGGGCCTCTTTGCATATCAAAGACTCGACTTTGGAGGCGTTTCTCTCAAAGATCTTGCAGCAAATGCTACACCGTATGAAGAGGCTCTCTCAAATGGCAAGCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT GT CATGCTAAA TGTT GACAA CACAAAGTGGGAACAAGAGCTTGACGAGTTTAGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGCTAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCGATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGCTGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCATTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAATGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCACTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACT AAAATTTGTGTGATATATATATGCTTCTGCTACTCTTGG                  ]
[+] EMBL AK098932             [  TGCCGTCTCGTACTCTCTCGTGCAGGCTAACGTTGGAATCTTGGGAGGGGAGATGGCGGTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAGCCTCGCCGGCTTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCTTCCGCCCGCGGCGGGCCCGTCGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCCGCAGACGGATGAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAGGATGCTGGAAATCCAACTTTTCCCAATAAAGATCTC AGCAGAAGGATAGCACTGGCCTCCACTATTGGAGCTG TGGGCCTCTTTGCATATCAAAGACTCGACTTTGGAGGCGTTTCTCTCAAAGATCTTGCAGCAAATGCTACACCGTATGAAGAGGCTCTCTCAAATGGCAAGCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT GT CATGCTAAA TGTT GACAA CACAAAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGCTAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCGATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGCTGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCATTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAATGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCACTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACT AAAATTTGTGTGATATATATATGCTTCTGCT                          ]
[+] EMBL AK104279             [          CGTACTCTCTCGTGCAGGCTAACGTTGGAATCTTGGGAGGGGAGATGGCGGTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAGCCTCGCCGGCTTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCTTCCGCCCGCGGCGGGCCCGTCGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCCGCAGACGGATGAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAGGATGCTGGAAATCCAACTTTTCCCAATAAAGATCTC AGCAGAAGGATAGCACTGGCCTCCACTATTGGAGCTG TGGGCCTCTTTGCATATCAAAGACTCGACTTTGGAGGCGTTTCTCTCAAAGATCTTGCAGCAAATGCTACACCGTATGAAGAGGCTCTCTCAAATGGCAAGCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT GT CATGCTAAA TGTT GACAA CACAAAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGCTAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCGATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGCTGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCATTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAATGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCACTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACT AAAATTTGTGTGATATATATATGCTTCTGCTACTCTTGGGGAAAGCTGCACAACCT ]
[+] EMBL CB684370             [            TACTCTCTCTTGCAGGCTAACGTTGGAATCTTGGGAGGGGAGATGGCGGTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAGCCTCGCCGGCTTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCTTCCGCCCGCGGCGGGCCCGTCGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCCGCAGACGGATGAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAGGATGCTGGAAATCCAACTTTTCCCAATAAAGATCTC AGCAGAAGGATAGCACTGGCCTCCACTATTGGAGCTG TGGGCCTCTTTGCATATCAAAGACTCGACTTTGGAGGCGTTTCTCTCAAAGATCTTGCAGCAAATGCTACACCGTATGAAGAGGCTCTCTCAAATGGCAAGCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT GT CATGCTAAA TGTT GACAA CACAAAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB620502             [               TCTCTCCTG AGGCTAACGTTGGAATCTTGGGAGGGGAGATGGCGGTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAGCCTCGCCGGCTTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCCTCCGCCCGCGGCGGGCCCGTCGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCCGCAGACGGATGAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAGGATGCTGGAAATCCAACTTTTCCCAATAAAGATCTC AGCAGAAGGATAGCACTGGCCTCCACTATTGGAGCTG TGGGCCTCTTTGCATATCAAAGACTCGACTTTGGAGGCGTTTCTCTCAAAGATCTTGCAGCAAATGCTACACCGTATGAAGAGGCTCTCTCAAATGGCAAGCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT GT CATGCTAAA TGTT GACAA CACAAAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTTCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C72118               [                            CTAACGTTGGAATCTTGGGAGGGGAGATGGCGGTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAG CTCGCCGGCTTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCTTCCGCCCGCGG GNGCCCGTCGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCC AAGACGGATGAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAGGATGCTGGAAATCCAACTTTTTCCAATAAAGATCTCAAGCAGAAGGATAGAATTGGCCTCAATAATTGGAACTGTTGGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB684371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTCTCTCAAATGGCAAGCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT GT CATGCTAAA TGTT GACAA CACAAAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGCTAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCGATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGCTGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCATTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAATGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCACTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACTAAAAATGTGTGTGATATATATATGCTTCTGCTACTCTTGG                  ]
[-] EMBL CB620503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCCCACTGTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTACAAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTT GT CATGCTAAA TGTT GACAA CACAAAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGCTAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCGATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGCTGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCATTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAATGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCACTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACT AAAATTTGTGTGATATATATAT                                   ]
[+] EMBL AU101122             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAACTTTGGTCCATGCTAAATTGTTGGACAACCCCAAAGTGGNAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTNGCCTTTCTGGACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTTGATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGCCAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGCTAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCGATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGCTGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCATTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAATGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCACTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACT AAAATTTGTGTGATATATATATGCTTCTGCTACTCTTGGGGAAAGCTGCAAAAaaaa]




>consensus_11694#0
CGTGCCGTCTCGTACTCTCTCGTGCAGGCTAACGTTGGAATCTTGGGAGGGGAGATGGCG
GTCGTGGCATCGAGGTGTACGGGGCTGCTCCTCCCCGACCTCGGCGCGAGCCTCGCCGGC
TTCCGCCGCCGCCGCTCGACGCCGGCTTCTTCTCTCAGCTTCCGCCCGCGGCGGGCCCGT
CGACGGCTCGGGTCCCTCTCCTGCATCGCGCCGCCCGATTCGGCGGAGCCGCAGACGGAT
GAGCCGGCCGCCAAAGATGACTCGACTGAAGATAAGGCTGAGGCAAGTAGTGCATCCCAG
GATGCTGGAAATCCAACTTTTCCCAATAAAGATCTCAGCAGAAGGATAGCACTGGCCTCC
ACTATTGGAGCTGTGGGCCTCTTTGCATATCAAAGACTCGACTTTGGAGGCGTTTCTCTC
AAAGATCTTGCAGCAAATGCTACACCGTATGAAGAGGCTCTCTCAAATGGCAAGCCCACT
GTAGTTGAATTTTATGCAGACTGGTGTGAAGTTTGTCGAGAATTAGCACCAGATGTCTAC
AAAGTTGAGCAACAGTACAAGGACCGTGTCAACTTTGTCATGCTAAATGTTGACAACACA
AAGTGGGAACAAGAGCTTGACGAGTTTGGAGTAGAAGGCATTCCTCATTTTGCCTTTCTG
GACAAGGAGGGAAATGAGGAAGGCAATGTTGTTGGGAGACTTCCAAAACAATATTTTCTT
GATAATGTGGTTGCTCTTGCTTCCGGTGAGCCCACTGTACCTCATGCACGGGTTGTTGGC
CAATTCTCGAGTGCAGAATCCCGAAAAGTTCATCAAGTTGCTGATCCAAGAAGCCATGGC
TAACAATAGCTTGTGGTGATCAATTTTAGTGGTAATGCTAAGACCTATTGACAAGAGGCG
ATATGGTCTGCATGCTCAGTCCTGGAACCAAGCATTAGCGCGTGGACATTGGTACTGAGC
TGTTCCAACTCCCTTAACGTATATGATTTTGCTGGTAGAACCAGGCATTCGGCTACAGCA
TTGATATGTTGGTGATATTTGAATCGGTGCATGTCTGCATACATATTTGCATAATGAAAA
TGCAGACATGTGTTGCAGCCGCAAGCATGCCCATGTTAGTAAACTGTTTACCAATCACCA
CTAGTTTCTACTTAGAATTGCAATAGAATGTTTATATACAGGAGCTTACTAAAATTTGTG
TGATATATATATGCTTCTGCTACTCTTGGGGAAAGCTGCACAACCTA
clustalw multiple alignements is not computed in this case